Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585210 | XP_013447071.1 | 91.074 | 773 | 42 | 2 | 1 | 764 | 1 | 755 | 0.0 | 1366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585210 | sp|Q38861|XPB1_ARATH | 80.649 | 770 | 115 | 7 | 1 | 756 | 1 | 750 | 0.0 | 1206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585210 | A0A072TW37 | 91.074 | 773 | 42 | 2 | 1 | 764 | 1 | 755 | 0.0 | 1366 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0585210 | Msa0672660 | 0.973410 | 2.210879e-136 | -8.615850e-47 |
| Msa0585210 | Msa0672700 | 0.978072 | 4.581419e-145 | -8.615850e-47 |
| Msa0585210 | Msa0931530 | 0.973428 | 2.064027e-136 | -8.615850e-47 |
| Msa0585210 | Msa1063380 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585210 | MtrunA17_Chr8g0387201 | 91.074 | 773 | 42 | 2 | 1 | 764 | 1 | 755 | 0.0 | 1366 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585210 | AT5G41370.1 | 80.649 | 770 | 115 | 7 | 1 | 756 | 1 | 750 | 0.0 | 1206 |
| Msa0585210 | AT5G41360.2 | 81.669 | 731 | 112 | 4 | 34 | 761 | 42 | 753 | 0.0 | 1188 |
| Msa0585210 | AT5G41360.1 | 82.256 | 727 | 106 | 5 | 34 | 756 | 42 | 749 | 0.0 | 1188 |
Find 176 sgRNAs with CRISPR-Local
Find 585 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCATGCTCGGAATTTATT+TGG | 0.136917 | 4_2:-5743674 | None:intergenic |
| CATGATTCTACTGCAAATTA+TGG | 0.163768 | 4_2:+5739550 | Msa0585210:CDS |
| TGATCAGGGTTACAGCTTTA+AGG | 0.171890 | 4_2:+5744922 | Msa0585210:CDS |
| CTCCAACATGGGATAATTTA+AGG | 0.203128 | 4_2:-5741678 | None:intergenic |
| ACATATAATATGGTTGCTTT+TGG | 0.236023 | 4_2:+5742810 | Msa0585210:CDS |
| TACATATTTACATTAACTTA+TGG | 0.255496 | 4_2:+5747102 | Msa0585210:three_prime_UTR |
| AACACCAACTAGGGACTTTC+CGG | 0.270811 | 4_2:-5742613 | None:intergenic |
| AGGCTTCACCTGTCTCTTCT+TGG | 0.278361 | 4_2:-5743341 | None:intergenic |
| ATCACACAAATCGTCCTCTT+TGG | 0.280975 | 4_2:+5739209 | Msa0585210:CDS |
| ATGGGATAATTTAAGGCATT+TGG | 0.283714 | 4_2:-5741671 | None:intergenic |
| TATCACCACGTTCCCTTTCA+TGG | 0.285517 | 4_2:-5743712 | None:intergenic |
| CACCACACATGGTTGATGTT+TGG | 0.290935 | 4_2:+5747164 | Msa0585210:three_prime_UTR |
| TTTAGTTCCATCTCGAGGTC+TGG | 0.295958 | 4_2:-5742121 | None:intergenic |
| CATACAGTTTGGGACCAATT+AGG | 0.307490 | 4_2:-5743204 | None:intergenic |
| CATCTGTATCCCTGTTGAAT+TGG | 0.311743 | 4_2:+5746519 | Msa0585210:CDS |
| AAACCCTCATGTGATTAAAA+AGG | 0.312138 | 4_2:+5746984 | Msa0585210:three_prime_UTR |
| CCAATTTGCCTCATACAGTT+TGG | 0.314774 | 4_2:-5743215 | None:intergenic |
| AATTGGTTGGATCTTGTAAA+AGG | 0.316540 | 4_2:+5743232 | Msa0585210:CDS |
| TTCGCTGTATGCTGCGGTTT+CGG | 0.319268 | 4_2:+5739444 | Msa0585210:CDS |
| AGCGTCTGGGTCGTATTCTT+AGG | 0.321135 | 4_2:+5744385 | Msa0585210:CDS |
| ACAGATCTGAACTTCCTAAT+TGG | 0.321620 | 4_2:+5743190 | Msa0585210:CDS |
| TGTCTCTTTGCTGGATCTTT+CGG | 0.327780 | 4_2:-5746929 | None:intergenic |
| CATTGGTTTGCGGAGTTTCA+TGG | 0.328602 | 4_2:-5743780 | None:intergenic |
| TATTTGGATTCATCACATAA+AGG | 0.329096 | 4_2:-5743658 | None:intergenic |
| ATATTTGCAGGTGCTGAAAA+AGG | 0.330555 | 4_2:+5738500 | Msa0585210:intron |
| CCAAACTGTATGAGGCAAAT+TGG | 0.337223 | 4_2:+5743215 | Msa0585210:CDS |
| TGAATAATCACATTTGCTTC+AGG | 0.344919 | 4_2:-5744324 | None:intergenic |
| AATAAGTGGTGTCTCTTTGC+TGG | 0.346134 | 4_2:-5746938 | None:intergenic |
| AACAGTATTCACGTCTTTGC+TGG | 0.347148 | 4_2:-5743946 | None:intergenic |
| TCACACAAATCGTCCTCTTT+GGG | 0.353153 | 4_2:+5739210 | Msa0585210:CDS |
| CACTTATTTAGAAAACGATT+TGG | 0.355765 | 4_2:+5746953 | Msa0585210:exon |
| ATTTGGATTCATCACATAAA+GGG | 0.355854 | 4_2:-5743657 | None:intergenic |
| CAACTCAATTCCAATTCAAC+AGG | 0.358066 | 4_2:-5746529 | None:intergenic |
| AAGAGCCTTAGTAAAATGTT+TGG | 0.360031 | 4_2:+5742174 | Msa0585210:CDS |
| AGAATGGGGATTGCTGCTTA+TGG | 0.362406 | 4_2:+5742884 | Msa0585210:CDS |
| GATATGGCCGTGGTGTGCTT+GGG | 0.362431 | 4_2:-5742146 | None:intergenic |
| CTCCGCAAACCAATGATATA+TGG | 0.363195 | 4_2:+5743788 | Msa0585210:CDS |
| AGCTTCCTAAAGAGATGATT+AGG | 0.364739 | 4_2:+5739521 | Msa0585210:CDS |
| TGCAAAAGGGATGGTTTATA+TGG | 0.365853 | 4_2:+5746699 | Msa0585210:CDS |
| ATAAACCTAATCATCTCTTT+AGG | 0.372165 | 4_2:-5739526 | None:intergenic |
| TGTTGTGACAACATATAATA+TGG | 0.372226 | 4_2:+5742800 | Msa0585210:CDS |
| CGGCTTTGCTCTTGATCTGT+TGG | 0.374045 | 4_2:-5746909 | None:intergenic |
| TTGGTGTTTCAGCAGCTTCC+CGG | 0.376812 | 4_2:+5742628 | Msa0585210:CDS |
| GCGTCAAGAAGCACAGCGTC+TGG | 0.379944 | 4_2:+5744371 | Msa0585210:CDS |
| CCATCGCCGAGCCCGTTTGC+AGG | 0.382900 | 4_2:+5739305 | Msa0585210:CDS |
| CTTGTAGCACCATATATCAT+TGG | 0.385865 | 4_2:-5743797 | None:intergenic |
| CAATTTGCCTCATACAGTTT+GGG | 0.388906 | 4_2:-5743214 | None:intergenic |
| TAAATGGCAGGGAAAGCTTC+AGG | 0.390345 | 4_2:+5744666 | Msa0585210:intron |
| TGATATGGCCGTGGTGTGCT+TGG | 0.393892 | 4_2:-5742147 | None:intergenic |
| CAGGAAGATGATGATACTTA+TGG | 0.396629 | 4_2:+5738633 | Msa0585210:intron |
| CATAATTTGCAGTAGAATCA+TGG | 0.398414 | 4_2:-5739549 | None:intergenic |
| GATTTACACACCTCTGGAAA+TGG | 0.405968 | 4_2:-5739619 | None:intergenic |
| ATGATTCTACTGCAAATTAT+GGG | 0.406082 | 4_2:+5739551 | Msa0585210:CDS |
| TTAGTTCCATCTCGAGGTCT+GGG | 0.406412 | 4_2:-5742120 | None:intergenic |
| AATCTAATTCATCGAAATCA+TGG | 0.415325 | 4_2:+5738387 | Msa0585210:exon |
| CTTAGTAAAATGTTTGGAAA+TGG | 0.416991 | 4_2:+5742180 | Msa0585210:CDS |
| ACTAAATCTCACTGCAAACT+TGG | 0.417365 | 4_2:+5743047 | Msa0585210:CDS |
| AGAAATAAGAAACAGAGAAT+GGG | 0.424172 | 4_2:+5742869 | Msa0585210:CDS |
| TTCTCATAAATTACCATGAA+AGG | 0.428573 | 4_2:+5743699 | Msa0585210:CDS |
| TCATCATCTCGATGATCAAC+TGG | 0.437109 | 4_2:+5746477 | Msa0585210:CDS |
| AAGAAATAAGAAACAGAGAA+TGG | 0.440448 | 4_2:+5742868 | Msa0585210:CDS |
| TGCTGTCTCTGTGGATCAGT+GGG | 0.446657 | 4_2:+5742683 | Msa0585210:CDS |
| CCTCTTTGGGCTTGTGACAA+TGG | 0.452599 | 4_2:+5739223 | Msa0585210:CDS |
| AATCATCTCTTTAGGAAGCT+TGG | 0.456652 | 4_2:-5739518 | None:intergenic |
| CACTGCAAACTTGGGCTCAC+AGG | 0.460451 | 4_2:+5743056 | Msa0585210:CDS |
| AATTGGTCCCAAACTGTATG+AGG | 0.461446 | 4_2:+5743207 | Msa0585210:CDS |
| AGAGGACGATTTGTGTGATC+CGG | 0.463995 | 4_2:-5739205 | None:intergenic |
| TCTCTTCACATGCTGGTTCA+AGG | 0.464065 | 4_2:+5744349 | Msa0585210:CDS |
| TTTGTACCTGCAAACGGGCT+CGG | 0.464648 | 4_2:-5739311 | None:intergenic |
| ATTCAGATCTCTTCACATGC+TGG | 0.465501 | 4_2:+5744342 | Msa0585210:CDS |
| ATGTACAGTGTGCTGAAGTA+TGG | 0.466560 | 4_2:+5743269 | Msa0585210:CDS |
| CAAATCTAGATTACCTGAGC+AGG | 0.474858 | 4_2:-5740450 | None:intergenic |
| TAGCAAATTAGAGTTGAAAC+CGG | 0.479614 | 4_2:+5739186 | Msa0585210:CDS |
| ATAGTTCTACCTTGTGGTGC+CGG | 0.479656 | 4_2:+5742594 | Msa0585210:CDS |
| TCTCATAAATTACCATGAAA+GGG | 0.480428 | 4_2:+5743700 | Msa0585210:CDS |
| TCTCTTGTACTGTATATTCG+TGG | 0.485920 | 4_2:-5747266 | None:intergenic |
| TTTGCAAGGGCATGTGTCAC+CGG | 0.488265 | 4_2:+5742217 | Msa0585210:CDS |
| AGGTATTGAAGACATTGCTC+AGG | 0.488409 | 4_2:+5739725 | Msa0585210:intron |
| CCATGTGTGGTGTGGTCACC+AGG | 0.488841 | 4_2:-5747153 | None:intergenic |
| AGTGCAATGTCAGGTGCAAA+AGG | 0.493706 | 4_2:+5746685 | Msa0585210:CDS |
| CTGTATGCTGCGGTTTCGGT+TGG | 0.496346 | 4_2:+5739448 | Msa0585210:CDS |
| GCGTCTGGGTCGTATTCTTA+GGG | 0.498202 | 4_2:+5744386 | Msa0585210:CDS |
| CAAGAGAAAGATTATTATGA+TGG | 0.507062 | 4_2:+5747282 | Msa0585210:three_prime_UTR |
| CAATGATATATGGTGCTACA+AGG | 0.508056 | 4_2:+5743798 | Msa0585210:CDS |
| ATTTGAAATTGATCCTGCTC+AGG | 0.511250 | 4_2:+5740437 | Msa0585210:CDS |
| TGGTTGGATCTTGTAAAAGG+TGG | 0.512861 | 4_2:+5743235 | Msa0585210:CDS |
| TCTTATACTCAAATATATCC+TGG | 0.516646 | 4_2:+5747135 | Msa0585210:three_prime_UTR |
| GTTTAGGGCACTCATGGAGA+TGG | 0.518176 | 4_2:+5740312 | Msa0585210:intron |
| GGATGGTTTATATGGAGTAC+AGG | 0.521135 | 4_2:+5746707 | Msa0585210:CDS |
| GGATCGATGAGTGCAATGTC+AGG | 0.522160 | 4_2:+5746676 | Msa0585210:CDS |
| ACTGTATGAGGCAAATTGGT+TGG | 0.524427 | 4_2:+5743219 | Msa0585210:CDS |
| TTATGAGAAACTCGCATGCT+CGG | 0.526503 | 4_2:-5743685 | None:intergenic |
| TAAGAAGAATCGTTACTATG+TGG | 0.527424 | 4_2:+5739591 | Msa0585210:CDS |
| TGCCTTAAATTATCCCATGT+TGG | 0.531333 | 4_2:+5741676 | Msa0585210:CDS |
| TAAAATGTTTGGAAATGGTA+TGG | 0.531606 | 4_2:+5742185 | Msa0585210:CDS |
| GAGAGATTCCGTGGTAACGC+TGG | 0.532353 | 4_2:+5742774 | Msa0585210:CDS |
| TGCAGCTACACTTGTGAGAG+AGG | 0.532637 | 4_2:+5743156 | Msa0585210:intron |
| AAAAGTGCTCGTCGTTCTCA+AGG | 0.533168 | 4_2:+5746655 | Msa0585210:CDS |
| CCTTGTGTCGACCGATACCC+AGG | 0.535565 | 4_2:+5744735 | Msa0585210:CDS |
| AAGCTGCTGAAACACCAACT+AGG | 0.535810 | 4_2:-5742623 | None:intergenic |
| ATGTTTGGAAATGGTATGGC+TGG | 0.537623 | 4_2:+5742189 | Msa0585210:CDS |
| TTGTATTCGTGCATCGACTC+AGG | 0.541464 | 4_2:-5739409 | None:intergenic |
| GTCGTCATCGTAAGCATCAT+CGG | 0.541861 | 4_2:-5738658 | None:intergenic |
| AAGCTTCAGGATAGGATGGC+TGG | 0.541968 | 4_2:+5744679 | Msa0585210:CDS |
| CCTGCAAACGGGCTCGGCGA+TGG | 0.542090 | 4_2:-5739305 | None:intergenic |
| GAAATAAGAAACAGAGAATG+GGG | 0.543248 | 4_2:+5742870 | Msa0585210:CDS |
| AGAGAACTCCAAGAAGAGAC+AGG | 0.548803 | 4_2:+5743333 | Msa0585210:CDS |
| AACGACATATTTGTTCATCT+CGG | 0.550470 | 4_2:-5742734 | None:intergenic |
| AGCTTGCCTCCATCTGATGA+AGG | 0.551771 | 4_2:+5746439 | Msa0585210:CDS |
| ATGCTGTCTCTGTGGATCAG+TGG | 0.555068 | 4_2:+5742682 | Msa0585210:CDS |
| CACCATATATCATTGGTTTG+CGG | 0.555102 | 4_2:-5743790 | None:intergenic |
| CGTCAAGAAGCACAGCGTCT+GGG | 0.556542 | 4_2:+5744372 | Msa0585210:CDS |
| CCTGGGTATCGGTCGACACA+AGG | 0.558424 | 4_2:-5744735 | None:intergenic |
| ATCTAATTCATCGAAATCAT+GGG | 0.559558 | 4_2:+5738388 | Msa0585210:exon |
| GCGGAGTTTCATGGCATACT+CGG | 0.559802 | 4_2:-5743771 | None:intergenic |
| CTAAATCTCACTGCAAACTT+GGG | 0.561239 | 4_2:+5743048 | Msa0585210:CDS |
| ACAAGGTAGAACTATGATAC+CGG | 0.568352 | 4_2:-5742586 | None:intergenic |
| AAGTCATACTCCTCCAACAT+GGG | 0.569092 | 4_2:-5741689 | None:intergenic |
| ATGACAATAATCAAGAATGC+AGG | 0.572001 | 4_2:+5747043 | Msa0585210:three_prime_UTR |
| CCTGGTGACCACACCACACA+TGG | 0.572687 | 4_2:+5747153 | Msa0585210:three_prime_UTR |
| AGCTGCTGAAACACCAACTA+GGG | 0.575072 | 4_2:-5742622 | None:intergenic |
| ACAAGGTAAGAATGCAATGC+CGG | 0.576754 | 4_2:-5742236 | None:intergenic |
| ATATGGCCGTGGTGTGCTTG+GGG | 0.580226 | 4_2:-5742145 | None:intergenic |
| CCTTCAGGTAGAGCAAGATC+CGG | 0.580416 | 4_2:+5742567 | Msa0585210:intron |
| TCATAAGCTTGTTTGTACAA+AGG | 0.581916 | 4_2:-5739271 | None:intergenic |
| TTTAAAATCAGCAAAGCACT+AGG | 0.583264 | 4_2:+5740336 | Msa0585210:CDS |
| GGGATTGCTGCTTATGGACG+AGG | 0.585259 | 4_2:+5742890 | Msa0585210:CDS |
| GGGTCGTATTCTTAGGGCAA+AGG | 0.588925 | 4_2:+5744392 | Msa0585210:CDS |
| GGGAAAGCTTCAGGATAGGA+TGG | 0.590165 | 4_2:+5744675 | Msa0585210:intron |
| ATAAATGTATACCTGGGTAT+CGG | 0.590389 | 4_2:-5744746 | None:intergenic |
| ACCGCATTCGCTGTATGCTG+CGG | 0.590897 | 4_2:+5739438 | Msa0585210:CDS |
| TTATTTGCAGCCATGTTGAG+AGG | 0.593332 | 4_2:+5743898 | Msa0585210:intron |
| GATGATCAACTGGCACTACT+CGG | 0.594721 | 4_2:+5746487 | Msa0585210:CDS |
| CTTAAATTATCCCATGTTGG+AGG | 0.600247 | 4_2:+5741679 | Msa0585210:CDS |
| AAAGCACTAGGTGAGATTGA+AGG | 0.606763 | 4_2:+5740348 | Msa0585210:CDS |
| CAATTCAACAGGGATACAGA+TGG | 0.607702 | 4_2:-5746518 | None:intergenic |
| GGTGCCGGAAAGTCCCTAGT+TGG | 0.612274 | 4_2:+5742609 | Msa0585210:CDS |
| GGCAACAAATGCTGTCTCTG+TGG | 0.616726 | 4_2:+5742674 | Msa0585210:CDS |
| GGGGCTTTAGTTCCATCTCG+AGG | 0.618388 | 4_2:-5742126 | None:intergenic |
| AAGTGAGATCCTTCATCAGA+TGG | 0.618538 | 4_2:-5746448 | None:intergenic |
| AATGTCAGGTGCAAAAGGGA+TGG | 0.623263 | 4_2:+5746690 | Msa0585210:CDS |
| ATGATGCTATATCGCGAGCA+AGG | 0.624247 | 4_2:+5739749 | Msa0585210:CDS |
| ACCGCAGCATACAGCGAATG+CGG | 0.628106 | 4_2:-5739439 | None:intergenic |
| TCAACTGGCACTACTCGGAA+AGG | 0.628539 | 4_2:+5746492 | Msa0585210:CDS |
| TGCAGTACTGGGCATAACAA+AGG | 0.630774 | 4_2:+5746886 | Msa0585210:intron |
| ATCCAAACATCAACCATGTG+TGG | 0.633774 | 4_2:-5747166 | None:intergenic |
| CAACAACTCCAGCGTTACCA+CGG | 0.635366 | 4_2:-5742782 | None:intergenic |
| TAGGATGGCTGGTGGCAAAG+AGG | 0.635488 | 4_2:+5744690 | Msa0585210:CDS |
| GAAGTCATACTCCTCCAACA+TGG | 0.636793 | 4_2:-5741690 | None:intergenic |
| GGCAGGGAAAGCTTCAGGAT+AGG | 0.638026 | 4_2:+5744671 | Msa0585210:intron |
| GGTGAACCCAGACCTCGAGA+TGG | 0.640415 | 4_2:+5742114 | Msa0585210:intron |
| AGAAAGTCTCAAGGAAAATG+CGG | 0.642411 | 4_2:-5739246 | None:intergenic |
| GCGAGCAAGGATCACTTCTG+AGG | 0.642760 | 4_2:+5739762 | Msa0585210:CDS |
| GGTATCATAGTTCTACCTTG+TGG | 0.642998 | 4_2:+5742588 | Msa0585210:CDS |
| GGTATTGAAGACATTGCTCA+GGG | 0.645900 | 4_2:+5739726 | Msa0585210:intron |
| TAAATATGTAACTTATGTTG+AGG | 0.649618 | 4_2:-5747089 | None:intergenic |
| GTGCAATGTCAGGTGCAAAA+GGG | 0.652794 | 4_2:+5746686 | Msa0585210:CDS |
| GACAGCAAAGAGAGATTCCG+TGG | 0.654068 | 4_2:+5742765 | Msa0585210:CDS |
| ATTACACAGACGCCACTGCA+TGG | 0.656925 | 4_2:-5747009 | None:intergenic |
| AGGGACTTTCCGGCACCACA+AGG | 0.657347 | 4_2:-5742603 | None:intergenic |
| AATTACCATGAAAGGGAACG+TGG | 0.660495 | 4_2:+5743707 | Msa0585210:CDS |
| CTGGGTATCGGTCGACACAA+GGG | 0.660689 | 4_2:-5744734 | None:intergenic |
| GAAACTAACGAATTTAGCAG+CGG | 0.665712 | 4_2:-5738546 | None:intergenic |
| GCATGATAAACAGGTGCATG+TGG | 0.671409 | 4_2:+5742989 | Msa0585210:intron |
| AACATCAACCATGTGTGGTG+TGG | 0.671894 | 4_2:-5747161 | None:intergenic |
| TGAGATCCTTCATCAGATGG+AGG | 0.672064 | 4_2:-5746445 | None:intergenic |
| ACAAAGGAGAGAAAGTCTCA+AGG | 0.672300 | 4_2:-5739255 | None:intergenic |
| GCTAAATCAAGCAGAAGTAG+CGG | 0.672882 | 4_2:+5740386 | Msa0585210:CDS |
| CCATTGTCACAAGCCCAAAG+AGG | 0.674133 | 4_2:-5739223 | None:intergenic |
| CTAAAGCCCCAAGCACACCA+CGG | 0.674306 | 4_2:+5742139 | Msa0585210:CDS |
| TGTGGAATCTCCATTTCCAG+AGG | 0.687355 | 4_2:+5739609 | Msa0585210:CDS |
| CTTCAGGATAGGATGGCTGG+TGG | 0.687755 | 4_2:+5744682 | Msa0585210:CDS |
| TTCATCGAAATCATGGGACA+CGG | 0.689283 | 4_2:+5738394 | Msa0585210:exon |
| AGATGTATTACTCAACCAAG+AGG | 0.692952 | 4_2:+5744885 | Msa0585210:CDS |
| AACTCAATTCCAATTCAACA+GGG | 0.695799 | 4_2:-5746528 | None:intergenic |
| GATGATGCTTACGATGACGA+CGG | 0.737584 | 4_2:+5738660 | Msa0585210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATGCAATATATAAT+AGG | - | chr4_2:5738913-5738932 | None:intergenic | 10.0% |
| !!! | GAATTTATTTTCTTAAAAAA+GGG | - | chr4_2:5740867-5740886 | None:intergenic | 10.0% |
| !!! | TGAATTTATTTTCTTAAAAA+AGG | - | chr4_2:5740868-5740887 | None:intergenic | 10.0% |
| !! | AATAAAATAATTTCAATGAA+TGG | - | chr4_2:5741784-5741803 | None:intergenic | 10.0% |
| !! | AATCTTTAGTTAAAATTATA+AGG | + | chr4_2:5743378-5743397 | Msa0585210:intron | 10.0% |
| !!! | TCATTTTGAAAATTATTAAT+TGG | + | chr4_2:5743486-5743505 | Msa0585210:intron | 10.0% |
| !!! | ATAGATTATTTAAGTTAAAA+TGG | + | chr4_2:5744087-5744106 | Msa0585210:intron | 10.0% |
| !!! | TAGATTATTTAAGTTAAAAT+GGG | + | chr4_2:5744088-5744107 | Msa0585210:intron | 10.0% |
| !! | TTTATTAATTCTGAATTTAT+TGG | + | chr4_2:5744485-5744504 | Msa0585210:intron | 10.0% |
| !!! | ATTTCAAAAAAATAGATTTT+GGG | - | chr4_2:5745221-5745240 | None:intergenic | 10.0% |
| !!! | TATTTCAAAAAAATAGATTT+TGG | - | chr4_2:5745222-5745241 | None:intergenic | 10.0% |
| !!! | TTTTTTTAATGATTTTTAAC+TGG | - | chr4_2:5745338-5745357 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAAAACACTTTTT+TGG | + | chr4_2:5745350-5745369 | Msa0585210:intron | 10.0% |
| !!! | AAAAAAAAAAACACTTTTTT+GGG | + | chr4_2:5745351-5745370 | Msa0585210:intron | 10.0% |
| !!! | TTTTTTTAATGATTTTTATC+TGG | - | chr4_2:5745450-5745469 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAAACACTTTTTT+TGG | + | chr4_2:5745462-5745481 | Msa0585210:intron | 10.0% |
| !!! | AAAAAAAAAACACTTTTTTT+GGG | + | chr4_2:5745463-5745482 | Msa0585210:intron | 10.0% |
| !! | CGTAACAAAATTAATAAATA+AGG | - | chr4_2:5738696-5738715 | None:intergenic | 15.0% |
| !! | ATTAATTATCTCATTAGATT+AGG | + | chr4_2:5738996-5739015 | Msa0585210:intron | 15.0% |
| !! | TTAATTATCTCATTAGATTA+GGG | + | chr4_2:5738997-5739016 | Msa0585210:intron | 15.0% |
| !! | ATTAATTATCTCATTAGATT+AGG | + | chr4_2:5738996-5739015 | Msa0585210:intron | 15.0% |
| !! | TTAATTATCTCATTAGATTA+GGG | + | chr4_2:5738997-5739016 | Msa0585210:intron | 15.0% |
| !! | ATAATAATAATACGACTAAA+TGG | - | chr4_2:5740535-5740554 | None:intergenic | 15.0% |
| !! | TAGTCGTATTATTATTATAA+AGG | + | chr4_2:5740537-5740556 | Msa0585210:intron | 15.0% |
| !!! | TTTTAAAATGCTATTTGATT+GGG | - | chr4_2:5741994-5742013 | None:intergenic | 15.0% |
| !!! | TTTTTAAAATGCTATTTGAT+TGG | - | chr4_2:5741995-5742014 | None:intergenic | 15.0% |
| !!! | AATTTAAAATAAAATTTGCC+GGG | - | chr4_2:5742275-5742294 | None:intergenic | 15.0% |
| !!! | CAATTTAAAATAAAATTTGC+CGG | - | chr4_2:5742276-5742295 | None:intergenic | 15.0% |
| !! | AAAATAAAACTAAAGAAAAC+AGG | - | chr4_2:5743993-5744012 | None:intergenic | 15.0% |
| !!! | TTTTCTTTAGTTTTATTTTG+AGG | + | chr4_2:5743994-5744013 | Msa0585210:intron | 15.0% |
| !!! | AAATTTAGAATTCAATTTGT+AGG | - | chr4_2:5744527-5744546 | None:intergenic | 15.0% |
| !! | ATTCAAATTCATGAATTAAA+TGG | + | chr4_2:5744650-5744669 | Msa0585210:intron | 15.0% |
| !! | ATCCAATAATCAATAATATA+TGG | - | chr4_2:5744783-5744802 | None:intergenic | 15.0% |
| !!! | ATCTATTTTTTTGAAATACA+AGG | + | chr4_2:5745224-5745243 | Msa0585210:intron | 15.0% |
| !!! | TTTAAAAAAAGCACTTTTTT+TGG | + | chr4_2:5745275-5745294 | Msa0585210:intron | 15.0% |
| !!! | TTAAAAAAAGCACTTTTTTT+GGG | + | chr4_2:5745276-5745295 | Msa0585210:intron | 15.0% |
| !! | AACAATTTAAATTAGACAAA+GGG | - | chr4_2:5745600-5745619 | None:intergenic | 15.0% |
| !! | AAACAATTTCAATTAGTTAT+TGG | + | chr4_2:5745635-5745654 | Msa0585210:intron | 15.0% |
| !! | TACATATTTACATTAACTTA+TGG | + | chr4_2:5747102-5747121 | Msa0585210:three_prime_UTR | 15.0% |
| !! | TTAATCTTGATGAATTGATT+GGG | - | chr4_2:5738454-5738473 | None:intergenic | 20.0% |
| !! | AATTTCAATTTCATATTTGC+AGG | + | chr4_2:5738488-5738507 | Msa0585210:intron | 20.0% |
| !! | ATGCAATATATAATAGGTAA+CGG | - | chr4_2:5738907-5738926 | None:intergenic | 20.0% |
| !!! | TAGATTATTGCGTTTTTATT+TGG | + | chr4_2:5739021-5739040 | Msa0585210:intron | 20.0% |
| !!! | AGATTATTGCGTTTTTATTT+GGG | + | chr4_2:5739022-5739041 | Msa0585210:intron | 20.0% |
| !!! | AGATTATTGCGTTTTTTATT+TGG | + | chr4_2:5739113-5739132 | Msa0585210:intron | 20.0% |
| !!! | GATTATTGCGTTTTTTATTT+GGG | + | chr4_2:5739114-5739133 | Msa0585210:intron | 20.0% |
| !!! | ATTATTGCGTTTTTTATTTG+GGG | + | chr4_2:5739115-5739134 | Msa0585210:intron | 20.0% |
| !! | TTCTAAACTACAATTGTATA+GGG | - | chr4_2:5740275-5740294 | None:intergenic | 20.0% |
| !! | ATTCTAAACTACAATTGTAT+AGG | - | chr4_2:5740276-5740295 | None:intergenic | 20.0% |
| !!! | TTTTCTAAAATGCAATACAT+TGG | - | chr4_2:5740661-5740680 | None:intergenic | 20.0% |
| !!! | GATGTGTTTATCTTTTTAAA+TGG | + | chr4_2:5741272-5741291 | Msa0585210:intron | 20.0% |
| !! | TTAAAAAATGTCAACAATGT+TGG | - | chr4_2:5741346-5741365 | None:intergenic | 20.0% |
| !!! | CTTTGTTTAAAGTTTCAAAA+AGG | - | chr4_2:5741407-5741426 | None:intergenic | 20.0% |
| !! | GAAACTTTAAACAAAGTTAA+AGG | + | chr4_2:5741411-5741430 | Msa0585210:intron | 20.0% |
| !!! | TAGTTTTGCCTTAATAATAT+AGG | + | chr4_2:5741444-5741463 | Msa0585210:intron | 20.0% |
| !!! | AGTTTTGCCTTAATAATATA+GGG | + | chr4_2:5741445-5741464 | Msa0585210:intron | 20.0% |
| !! | AGAAGATTAAATTTATGTTG+TGG | + | chr4_2:5741506-5741525 | Msa0585210:intron | 20.0% |
| !! | GAAGATTAAATTTATGTTGT+GGG | + | chr4_2:5741507-5741526 | Msa0585210:intron | 20.0% |
| !! | ATTGAAAGAAAAAAACTACT+GGG | - | chr4_2:5741927-5741946 | None:intergenic | 20.0% |
| !! | AATTGAAAGAAAAAAACTAC+TGG | - | chr4_2:5741928-5741947 | None:intergenic | 20.0% |
| !! | GTTATTATCTTCCAAATTTA+TGG | + | chr4_2:5742036-5742055 | Msa0585210:intron | 20.0% |
| !!! | TTTTTTTTTTTTGTTGCTAC+AGG | + | chr4_2:5742093-5742112 | Msa0585210:intron | 20.0% |
| !!! | TTAAGAGGAATTTTTTTTGT+TGG | - | chr4_2:5742343-5742362 | None:intergenic | 20.0% |
| !!! | TGTCTAAAATATTATGTTAC+CGG | + | chr4_2:5742410-5742429 | Msa0585210:intron | 20.0% |
| !! | TGTTAATACTATTGATATTG+TGG | + | chr4_2:5744192-5744211 | Msa0585210:intron | 20.0% |
| !! | GTTAATACTATTGATATTGT+GGG | + | chr4_2:5744193-5744212 | Msa0585210:intron | 20.0% |
| !! | ATGATAATAAGATGTTAACA+TGG | - | chr4_2:5744224-5744243 | None:intergenic | 20.0% |
| !!! | TAAATTTCATTTGTTTGTTG+TGG | + | chr4_2:5744540-5744559 | Msa0585210:intron | 20.0% |
| !!! | TGCCATATATTATTGATTAT+TGG | + | chr4_2:5744778-5744797 | Msa0585210:intron | 20.0% |
| !!! | AGGTATTTTCTTTCAATTTT+CGG | + | chr4_2:5744942-5744961 | Msa0585210:intron | 20.0% |
| !! | AATTTGTACATTTACTTTAC+TGG | + | chr4_2:5745011-5745030 | Msa0585210:intron | 20.0% |
| !!! | TATTTTTTTGAAATACAAGG+AGG | + | chr4_2:5745227-5745246 | Msa0585210:intron | 20.0% |
| !! | TAAACAAACACAAATAGTTT+CGG | + | chr4_2:5745377-5745396 | Msa0585210:intron | 20.0% |
| !! | CAACAATTTAAATTAGACAA+AGG | - | chr4_2:5745601-5745620 | None:intergenic | 20.0% |
| !! | CTTTGTCTAATTTAAATTGT+TGG | + | chr4_2:5745599-5745618 | Msa0585210:intron | 20.0% |
| !!! | AATGAATACAAGCTTTTATT+TGG | + | chr4_2:5745739-5745758 | Msa0585210:intron | 20.0% |
| !!! | GATCTAATTTCTCTTTTAAT+TGG | + | chr4_2:5746221-5746240 | Msa0585210:intron | 20.0% |
| !! | TCTTAATTAAGAACTCAAAA+AGG | - | chr4_2:5746805-5746824 | None:intergenic | 20.0% |
| !! | TTAAATTCTTTGATGCTAAT+TGG | + | chr4_2:5746852-5746871 | Msa0585210:intron | 20.0% |
| !! | TAAATATGTAACTTATGTTG+AGG | - | chr4_2:5747092-5747111 | None:intergenic | 20.0% |
| ! | AATCTAATTCATCGAAATCA+TGG | + | chr4_2:5738387-5738406 | Msa0585210:exon | 25.0% |
| ! | ATCTAATTCATCGAAATCAT+GGG | + | chr4_2:5738388-5738407 | Msa0585210:exon | 25.0% |
| ! | GTTAATCTTGATGAATTGAT+TGG | - | chr4_2:5738455-5738474 | None:intergenic | 25.0% |
| !! | TTTCTCATATTATTTTCCAC+AGG | + | chr4_2:5738614-5738633 | Msa0585210:intron | 25.0% |
| ! | TATATGTAACCAAGTTTACA+TGG | - | chr4_2:5738773-5738792 | None:intergenic | 25.0% |
| ! | CATATACCTGAATTATTGAT+AGG | + | chr4_2:5738787-5738806 | Msa0585210:intron | 25.0% |
| !!! | GATTATTGCGTTTTTATTTG+GGG | + | chr4_2:5739023-5739042 | Msa0585210:intron | 25.0% |
| ! | TTTGTGTTATGTTAATCAGA+AGG | + | chr4_2:5739056-5739075 | Msa0585210:intron | 25.0% |
| ! | TTTGTGTTATGTTAATCAGA+AGG | + | chr4_2:5739056-5739075 | Msa0585210:intron | 25.0% |
| ! | TTAATCAGAAGGAAAAACAA+AGG | + | chr4_2:5739159-5739178 | Msa0585210:intron | 25.0% |
| !!! | AATGTTTGATGATGAATGAT+AGG | + | chr4_2:5739386-5739405 | Msa0585210:intron | 25.0% |
| ! | ATAAACCTAATCATCTCTTT+AGG | - | chr4_2:5739529-5739548 | None:intergenic | 25.0% |
| ! | ATGATTCTACTGCAAATTAT+GGG | + | chr4_2:5739551-5739570 | Msa0585210:CDS | 25.0% |
| !! | GTTTTTGTAACAAATTTTGC+AGG | + | chr4_2:5739705-5739724 | Msa0585210:intron | 25.0% |
| ! | TTAACATGTCTAAATAGCTT+AGG | + | chr4_2:5739819-5739838 | Msa0585210:intron | 25.0% |
| ! | ATCACATTTAAATTACAGAG+AGG | - | chr4_2:5739927-5739946 | None:intergenic | 25.0% |
| ! | TCTAAACTACAATTGTATAG+GGG | - | chr4_2:5740274-5740293 | None:intergenic | 25.0% |
| !!! | GTAATCTAGATTTGAGATTT+TGG | + | chr4_2:5740459-5740478 | Msa0585210:intron | 25.0% |
| !!! | GATTTTGGATTTTTTTTTGC+AGG | + | chr4_2:5740474-5740493 | Msa0585210:intron | 25.0% |
| ! | ATGGAAAACAAAGAGATTAA+TGG | - | chr4_2:5740516-5740535 | None:intergenic | 25.0% |
| ! | TGAGAAAAATGATGTTTGAT+TGG | + | chr4_2:5740600-5740619 | Msa0585210:intron | 25.0% |
| ! | GAGAAAAATGATGTTTGATT+GGG | + | chr4_2:5740601-5740620 | Msa0585210:intron | 25.0% |
| !! | ATTTTCTTAAAAAAGGGAAG+AGG | - | chr4_2:5740861-5740880 | None:intergenic | 25.0% |
| ! | AAATGGTTAAATAAGAGTTC+TGG | + | chr4_2:5741289-5741308 | Msa0585210:intron | 25.0% |
| ! | AAACAAAGTTAAAGGATTTC+TGG | + | chr4_2:5741419-5741438 | Msa0585210:intron | 25.0% |
| ! | ATCTTCCAAATTTATGGTAA+TGG | + | chr4_2:5742042-5742061 | Msa0585210:intron | 25.0% |
| ! | AAACTCCATTACCATAAATT+TGG | - | chr4_2:5742050-5742069 | None:intergenic | 25.0% |
| !! | CATTTCCAAACATTTTACTA+AGG | - | chr4_2:5742182-5742201 | None:intergenic | 25.0% |
| ! | CTTAGTAAAATGTTTGGAAA+TGG | + | chr4_2:5742180-5742199 | Msa0585210:CDS | 25.0% |
| ! | TAAAATGTTTGGAAATGGTA+TGG | + | chr4_2:5742185-5742204 | Msa0585210:CDS | 25.0% |
| ! | CATTCTTACCTTGTTAAATT+TGG | + | chr4_2:5742245-5742264 | Msa0585210:intron | 25.0% |
| ! | TATAACAGCAACAAATTAAG+AGG | - | chr4_2:5742358-5742377 | None:intergenic | 25.0% |
| !! | GTCTAAAATATTATGTTACC+GGG | + | chr4_2:5742411-5742430 | Msa0585210:intron | 25.0% |
| !! | TCTAAAATATTATGTTACCG+GGG | + | chr4_2:5742412-5742431 | Msa0585210:intron | 25.0% |
| ! | CTTAATTACTTAAACAACAG+TGG | + | chr4_2:5742483-5742502 | Msa0585210:intron | 25.0% |
| ! | TGTTGTGACAACATATAATA+TGG | + | chr4_2:5742800-5742819 | Msa0585210:CDS | 25.0% |
| !!! | ACATATAATATGGTTGCTTT+TGG | + | chr4_2:5742810-5742829 | Msa0585210:CDS | 25.0% |
| !!! | CATATAATATGGTTGCTTTT+GGG | + | chr4_2:5742811-5742830 | Msa0585210:CDS | 25.0% |
| !!! | ATATAATATGGTTGCTTTTG+GGG | + | chr4_2:5742812-5742831 | Msa0585210:CDS | 25.0% |
| ! | AAGAAATAAGAAACAGAGAA+TGG | + | chr4_2:5742868-5742887 | Msa0585210:CDS | 25.0% |
| ! | AGAAATAAGAAACAGAGAAT+GGG | + | chr4_2:5742869-5742888 | Msa0585210:CDS | 25.0% |
| ! | GAGGTAATTGTTTAGATTTA+TGG | + | chr4_2:5742909-5742928 | Msa0585210:intron | 25.0% |
| !! | AATGACTTTTCGAAACATAT+GGG | - | chr4_2:5743021-5743040 | None:intergenic | 25.0% |
| !! | TAATGACTTTTCGAAACATA+TGG | - | chr4_2:5743022-5743041 | None:intergenic | 25.0% |
| ! | AAAATTATAAGGAGCAATTG+TGG | + | chr4_2:5743389-5743408 | Msa0585210:intron | 25.0% |
| ! | ATTTGGATTCATCACATAAA+GGG | - | chr4_2:5743660-5743679 | None:intergenic | 25.0% |
| ! | TATTTGGATTCATCACATAA+AGG | - | chr4_2:5743661-5743680 | None:intergenic | 25.0% |
| ! | TTCTCATAAATTACCATGAA+AGG | + | chr4_2:5743699-5743718 | Msa0585210:CDS | 25.0% |
| ! | TCTCATAAATTACCATGAAA+GGG | + | chr4_2:5743700-5743719 | Msa0585210:CDS | 25.0% |
| !!! | AGTATTAACAAGAAGTACTA+AGG | - | chr4_2:5744182-5744201 | None:intergenic | 25.0% |
| ! | TAGAATTCAATTTGTAGGAT+GGG | - | chr4_2:5744522-5744541 | None:intergenic | 25.0% |
| ! | TTAGAATTCAATTTGTAGGA+TGG | - | chr4_2:5744523-5744542 | None:intergenic | 25.0% |
| ! | AAATTCATGAATTAAATGGC+AGG | + | chr4_2:5744654-5744673 | Msa0585210:intron | 25.0% |
| ! | AATTCATGAATTAAATGGCA+GGG | + | chr4_2:5744655-5744674 | Msa0585210:intron | 25.0% |
| !!! | CAGCAATTTTTAATTGATCA+GGG | + | chr4_2:5744908-5744927 | Msa0585210:CDS | 25.0% |
| !!! | CATTTTTTTAGTGTTTGTTC+AGG | + | chr4_2:5745123-5745142 | Msa0585210:intron | 25.0% |
| ! | GTAAACAAACAAAATAGCTT+TGG | + | chr4_2:5745301-5745320 | Msa0585210:intron | 25.0% |
| !!! | ACAAATAGTTTCGGTTTTTT+TGG | + | chr4_2:5745386-5745405 | Msa0585210:intron | 25.0% |
| !!! | CAAATAGTTTCGGTTTTTTT+GGG | + | chr4_2:5745387-5745406 | Msa0585210:intron | 25.0% |
| !!! | AAATAGTTTCGGTTTTTTTG+GGG | + | chr4_2:5745388-5745407 | Msa0585210:intron | 25.0% |
| ! | TAAACAAACACAAATAGCTT+CGG | + | chr4_2:5745489-5745508 | Msa0585210:intron | 25.0% |
| ! | CTAATTGAAATTGTTTCACT+AGG | - | chr4_2:5745631-5745650 | None:intergenic | 25.0% |
| !!! | AACTTCTTTTAAGTAGGTTA+TGG | - | chr4_2:5745673-5745692 | None:intergenic | 25.0% |
| !!! | TTGCTTTGTTATTTCAAGAA+GGG | - | chr4_2:5745696-5745715 | None:intergenic | 25.0% |
| ! | AGGAAAAATAAGAAGAGAAA+TGG | + | chr4_2:5745947-5745966 | Msa0585210:intron | 25.0% |
| !!! | GTATCTTGGTAATATCATTT+TGG | + | chr4_2:5746067-5746086 | Msa0585210:intron | 25.0% |
| ! | ATCATATCATGCAAATAAAG+AGG | - | chr4_2:5746741-5746760 | None:intergenic | 25.0% |
| !! | CAAATCGTTTTCTAAATAAG+TGG | - | chr4_2:5746955-5746974 | None:intergenic | 25.0% |
| ! | CACTTATTTAGAAAACGATT+TGG | + | chr4_2:5746953-5746972 | Msa0585210:exon | 25.0% |
| ! | TCTTATACTCAAATATATCC+TGG | + | chr4_2:5747135-5747154 | Msa0585210:three_prime_UTR | 25.0% |
| ! | CAAGAGAAAGATTATTATGA+TGG | + | chr4_2:5747282-5747301 | Msa0585210:three_prime_UTR | 25.0% |
| !!! | TTTTTGTGTTTTAGACTTCT+AGG | + | chr4_2:5747311-5747330 | Msa0585210:three_prime_UTR | 25.0% |
| CCAAGTTTACATGGAAATTA+GGG | - | chr4_2:5738764-5738783 | None:intergenic | 30.0% | |
| ACCAAGTTTACATGGAAATT+AGG | - | chr4_2:5738765-5738784 | None:intergenic | 30.0% | |
| GGTAATCCTATCAATAATTC+AGG | - | chr4_2:5738796-5738815 | None:intergenic | 30.0% | |
| TAGCAAATTAGAGTTGAAAC+CGG | + | chr4_2:5739186-5739205 | Msa0585210:CDS | 30.0% | |
| ! | TCATAAGCTTGTTTGTACAA+AGG | - | chr4_2:5739274-5739293 | None:intergenic | 30.0% |
| ! | TCAAATTTTGTACCTGCAAA+CGG | - | chr4_2:5739320-5739339 | None:intergenic | 30.0% |
| ! | CATAATTTGCAGTAGAATCA+TGG | - | chr4_2:5739552-5739571 | None:intergenic | 30.0% |
| CATGATTCTACTGCAAATTA+TGG | + | chr4_2:5739550-5739569 | Msa0585210:CDS | 30.0% | |
| TAAGAAGAATCGTTACTATG+TGG | + | chr4_2:5739591-5739610 | Msa0585210:CDS | 30.0% | |
| GATTGGTAAAAGTAGTAAGA+AGG | - | chr4_2:5739663-5739682 | None:intergenic | 30.0% | |
| AAATAATACCCCACAAACAA+AGG | - | chr4_2:5739801-5739820 | None:intergenic | 30.0% | |
| ! | GTATGATCCTTGTTTATTCT+TGG | + | chr4_2:5739885-5739904 | Msa0585210:intron | 30.0% |
| AACCATATTATACACGAAAC+AGG | - | chr4_2:5739995-5740014 | None:intergenic | 30.0% | |
| GTTTCGTGTATAATATGGTT+TGG | + | chr4_2:5739995-5740014 | Msa0585210:intron | 30.0% | |
| !! | ATCTCTTAGGTTTTTGGATT+GGG | - | chr4_2:5740110-5740129 | None:intergenic | 30.0% |
| !! | AATCTCTTAGGTTTTTGGAT+TGG | - | chr4_2:5740111-5740130 | None:intergenic | 30.0% |
| AATACAACATGGAATCTCTT+AGG | - | chr4_2:5740123-5740142 | None:intergenic | 30.0% | |
| !! | ACTAAAAAAGTTGGTGGTAA+AGG | - | chr4_2:5740170-5740189 | None:intergenic | 30.0% |
| ACTACCTTGAATATTGTAGT+CGG | + | chr4_2:5740215-5740234 | Msa0585210:intron | 30.0% | |
| ! | TTTAAAATCAGCAAAGCACT+AGG | + | chr4_2:5740336-5740355 | Msa0585210:CDS | 30.0% |
| !!! | TTTTTTGCAGGATATTTCAC+TGG | + | chr4_2:5740486-5740505 | Msa0585210:intron | 30.0% |
| !! | GGATCGTTGATTTAATATTG+TGG | - | chr4_2:5740569-5740588 | None:intergenic | 30.0% |
| ! | ATTTTTCTCATGACAGATGA+TGG | - | chr4_2:5740590-5740609 | None:intergenic | 30.0% |
| ! | ATCTGCATTTAAAAAGCACA+TGG | - | chr4_2:5740748-5740767 | None:intergenic | 30.0% |
| ! | CTTTTTAAATGCAGATTGAC+AGG | + | chr4_2:5740752-5740771 | Msa0585210:intron | 30.0% |
| ! | AAGAGGAATTGCTATCATTT+TGG | - | chr4_2:5740844-5740863 | None:intergenic | 30.0% |
| ATAAATTCAGCAGTGCATAA+TGG | + | chr4_2:5740879-5740898 | Msa0585210:intron | 30.0% | |
| ! | ATGTAGTTTTTCCTGTTACT+CGG | - | chr4_2:5740922-5740941 | None:intergenic | 30.0% |
| TAACAGGAAAAACTACATCA+GGG | + | chr4_2:5740924-5740943 | Msa0585210:intron | 30.0% | |
| CAATGATCATGTTCACAAAT+TGG | - | chr4_2:5741081-5741100 | None:intergenic | 30.0% | |
| TGATGAGTTACACATTGTAA+TGG | + | chr4_2:5741209-5741228 | Msa0585210:intron | 30.0% | |
| !! | CCAAACTTCATTTTTCATCT+AGG | - | chr4_2:5741322-5741341 | None:intergenic | 30.0% |
| CCTAGATGAAAAATGAAGTT+TGG | + | chr4_2:5741319-5741338 | Msa0585210:intron | 30.0% | |
| !! | GTTTTGGCCCTATATTATTA+AGG | - | chr4_2:5741455-5741474 | None:intergenic | 30.0% |
| TGTGATTTCTGATAACAATC+TGG | - | chr4_2:5741562-5741581 | None:intergenic | 30.0% | |
| ! | AAAAGTTGTGATTTGTGTAC+AGG | + | chr4_2:5741622-5741641 | Msa0585210:intron | 30.0% |
| ! | ATGGGATAATTTAAGGCATT+TGG | - | chr4_2:5741674-5741693 | None:intergenic | 30.0% |
| TGATACAGTAAGTAATGCTT+TGG | + | chr4_2:5741718-5741737 | Msa0585210:intron | 30.0% | |
| GATACAGTAAGTAATGCTTT+GGG | + | chr4_2:5741719-5741738 | Msa0585210:intron | 30.0% | |
| ATACAGTAAGTAATGCTTTG+GGG | + | chr4_2:5741720-5741739 | Msa0585210:intron | 30.0% | |
| AAGAGCCTTAGTAAAATGTT+TGG | + | chr4_2:5742174-5742193 | Msa0585210:CDS | 30.0% | |
| !!! | AAAGACAGCTCTTTTTTATC+CGG | - | chr4_2:5742650-5742669 | None:intergenic | 30.0% |
| AAAAAAGAGCTGTCTTTGTT+TGG | + | chr4_2:5742653-5742672 | Msa0585210:CDS | 30.0% | |
| AACGACATATTTGTTCATCT+CGG | - | chr4_2:5742737-5742756 | None:intergenic | 30.0% | |
| !!! | TATAATATGGTTGCTTTTGG+GGG | + | chr4_2:5742813-5742832 | Msa0585210:CDS | 30.0% |
| GAAATAAGAAACAGAGAATG+GGG | + | chr4_2:5742870-5742889 | Msa0585210:CDS | 30.0% | |
| AAGAACAGAAAGAAGATTTC+AGG | - | chr4_2:5742955-5742974 | None:intergenic | 30.0% | |
| GTTATTAAACCAGTGCATAA+CGG | - | chr4_2:5743086-5743105 | None:intergenic | 30.0% | |
| AATTATTTCACTCAGCAAAG+AGG | - | chr4_2:5743128-5743147 | None:intergenic | 30.0% | |
| AATTGGTTGGATCTTGTAAA+AGG | + | chr4_2:5743232-5743251 | Msa0585210:CDS | 30.0% | |
| ! | GCGAAAAATTCTTTTGTCAT+TGG | - | chr4_2:5743298-5743317 | None:intergenic | 30.0% |
| !! | GAATACTGTTTTTCTTTCCA+AGG | + | chr4_2:5743959-5743978 | Msa0585210:CDS | 30.0% |
| GAATATGTTAAAGCACATAC+TGG | + | chr4_2:5744046-5744065 | Msa0585210:intron | 30.0% | |
| ATATCCTTACGAGTTTCATT+AGG | + | chr4_2:5744112-5744131 | Msa0585210:intron | 30.0% | |
| AGAATAAAAGAAACGATGCA+AGG | - | chr4_2:5744277-5744296 | None:intergenic | 30.0% | |
| TGAATAATCACATTTGCTTC+AGG | - | chr4_2:5744327-5744346 | None:intergenic | 30.0% | |
| !! | ATTTGTTTGTTGTGGAAAGT+GGG | + | chr4_2:5744548-5744567 | Msa0585210:intron | 30.0% |
| ATAAATGTATACCTGGGTAT+CGG | - | chr4_2:5744749-5744768 | None:intergenic | 30.0% | |
| CATGGAATAAATGTATACCT+GGG | - | chr4_2:5744755-5744774 | None:intergenic | 30.0% | |
| ACATGGAATAAATGTATACC+TGG | - | chr4_2:5744756-5744775 | None:intergenic | 30.0% | |
| CAATAATATATGGCATGACA+TGG | - | chr4_2:5744773-5744792 | None:intergenic | 30.0% | |
| ACTACTTAAACTAGCATTCA+AGG | + | chr4_2:5744822-5744841 | Msa0585210:intron | 30.0% | |
| !!! | ATTGTGCTGCTTTTGTTTAA+AGG | + | chr4_2:5744862-5744881 | Msa0585210:intron | 30.0% |
| AATTAAAAATTGCTGCCTCT+TGG | - | chr4_2:5744903-5744922 | None:intergenic | 30.0% | |
| !! | GCAGCAATTTTTAATTGATC+AGG | + | chr4_2:5744907-5744926 | Msa0585210:CDS | 30.0% |
| AAATTACCACAAGTGCAATA+GGG | - | chr4_2:5744974-5744993 | None:intergenic | 30.0% | |
| ACAAATTCATGTGAATCTTG+AGG | - | chr4_2:5744998-5745017 | None:intergenic | 30.0% | |
| AAGTTGTCAATGTGTTATCT+TGG | + | chr4_2:5745039-5745058 | Msa0585210:intron | 30.0% | |
| AGTTGTCAATGTGTTATCTT+GGG | + | chr4_2:5745040-5745059 | Msa0585210:intron | 30.0% | |
| TTGGGGAAAGAATGATTATT+TGG | + | chr4_2:5745058-5745077 | Msa0585210:intron | 30.0% | |
| TGGGGAAAGAATGATTATTT+GGG | + | chr4_2:5745059-5745078 | Msa0585210:intron | 30.0% | |
| !! | CTCTAAAATGAAAAGCTATG+AGG | + | chr4_2:5745185-5745204 | Msa0585210:intron | 30.0% |
| GTAAACAAACACAATAGCTT+TGG | + | chr4_2:5745413-5745432 | Msa0585210:intron | 30.0% | |
| !! | CTTGCTTTGTTATTTCAAGA+AGG | - | chr4_2:5745697-5745716 | None:intergenic | 30.0% |
| AAAAGCTTGTATTCATTCAC+AGG | - | chr4_2:5745736-5745755 | None:intergenic | 30.0% | |
| !! | ATTAGGTTTGTTGAAGGAAA+TGG | + | chr4_2:5745811-5745830 | Msa0585210:intron | 30.0% |
| TTTAAGCCTACAATCTCATT+TGG | - | chr4_2:5745875-5745894 | None:intergenic | 30.0% | |
| AATGAGATTGTAGGCTTAAA+TGG | + | chr4_2:5745875-5745894 | Msa0585210:intron | 30.0% | |
| ATGAGATTGTAGGCTTAAAT+GGG | + | chr4_2:5745876-5745895 | Msa0585210:intron | 30.0% | |
| ! | ATATTGAGAATTTGAGACTG+AGG | + | chr4_2:5746030-5746049 | Msa0585210:intron | 30.0% |
| ! | TATTGAGAATTTGAGACTGA+GGG | + | chr4_2:5746031-5746050 | Msa0585210:intron | 30.0% |
| !! | TGGTAATATCATTTTGGTGT+TGG | + | chr4_2:5746073-5746092 | Msa0585210:intron | 30.0% |
| !!! | TATCATTTTGGTGTTGGTTA+TGG | + | chr4_2:5746079-5746098 | Msa0585210:intron | 30.0% |
| !!! | ATCATTTTGGTGTTGGTTAT+GGG | + | chr4_2:5746080-5746099 | Msa0585210:intron | 30.0% |
| !!! | TTCTGTAGTTTGCTTTTACT+CGG | + | chr4_2:5746164-5746183 | Msa0585210:intron | 30.0% |
| AAGAGAAATTAGATCAGTGA+TGG | - | chr4_2:5746216-5746235 | None:intergenic | 30.0% | |
| AACTCAATTCCAATTCAACA+GGG | - | chr4_2:5746531-5746550 | None:intergenic | 30.0% | |
| AAACCCTCATGTGATTAAAA+AGG | + | chr4_2:5746984-5747003 | Msa0585210:three_prime_UTR | 30.0% | |
| ! | GTTCCTTTTTAATCACATGA+GGG | - | chr4_2:5746990-5747009 | None:intergenic | 30.0% |
| ATGACAATAATCAAGAATGC+AGG | + | chr4_2:5747043-5747062 | Msa0585210:three_prime_UTR | 30.0% | |
| !! | ATATTTGCAGGTGCTGAAAA+AGG | + | chr4_2:5738500-5738519 | Msa0585210:intron | 35.0% |
| GAAACTAACGAATTTAGCAG+CGG | - | chr4_2:5738549-5738568 | None:intergenic | 35.0% | |
| TAAGTATCATCATCTTCCTG+TGG | - | chr4_2:5738633-5738652 | None:intergenic | 35.0% | |
| CAGGAAGATGATGATACTTA+TGG | + | chr4_2:5738633-5738652 | Msa0585210:intron | 35.0% | |
| CCCTAATTTCCATGTAAACT+TGG | + | chr4_2:5738761-5738780 | Msa0585210:intron | 35.0% | |
| AGAAAGTCTCAAGGAAAATG+CGG | - | chr4_2:5739249-5739268 | None:intergenic | 35.0% | |
| ! | CAAATTTTGTACCTGCAAAC+GGG | - | chr4_2:5739319-5739338 | None:intergenic | 35.0% |
| ! | AATCATCTCTTTAGGAAGCT+TGG | - | chr4_2:5739521-5739540 | None:intergenic | 35.0% |
| AGCTTCCTAAAGAGATGATT+AGG | + | chr4_2:5739521-5739540 | Msa0585210:CDS | 35.0% | |
| !! | CTACTTTTACCAATCATTGC+TGG | + | chr4_2:5739668-5739687 | Msa0585210:intron | 35.0% |
| GAAATCTTACCAGCAATGAT+TGG | - | chr4_2:5739680-5739699 | None:intergenic | 35.0% | |
| ATTGCTGGTAAGATTTCATG+TGG | + | chr4_2:5739683-5739702 | Msa0585210:intron | 35.0% | |
| ! | TGATCACATCCTTTGTTTGT+GGG | + | chr4_2:5739789-5739808 | Msa0585210:intron | 35.0% |
| ! | TGATCCTTGTTTATTCTTGG+CGG | + | chr4_2:5739888-5739907 | Msa0585210:intron | 35.0% |
| TAAATTACAGAGAGGTAGCA+CGG | - | chr4_2:5739919-5739938 | None:intergenic | 35.0% | |
| ! | CATGGAATCTCTTAGGTTTT+TGG | - | chr4_2:5740116-5740135 | None:intergenic | 35.0% |
| !!! | TACCACCAACTTTTTTAGTG+TGG | + | chr4_2:5740171-5740190 | Msa0585210:intron | 35.0% |
| AACCACACTAAAAAAGTTGG+TGG | - | chr4_2:5740176-5740195 | None:intergenic | 35.0% | |
| CACAACCACACTAAAAAAGT+TGG | - | chr4_2:5740179-5740198 | None:intergenic | 35.0% | |
| AAGACCGACTACAATATTCA+AGG | - | chr4_2:5740222-5740241 | None:intergenic | 35.0% | |
| AACTACAATTGTATAGGGGA+TGG | - | chr4_2:5740270-5740289 | None:intergenic | 35.0% | |
| CCTAAACAAAAACAGCAACA+GGG | - | chr4_2:5740299-5740318 | None:intergenic | 35.0% | |
| !!! | CCTGTTGCTGTTTTTGTTTA+GGG | + | chr4_2:5740297-5740316 | Msa0585210:intron | 35.0% |
| ! | ATTTGAAATTGATCCTGCTC+AGG | + | chr4_2:5740437-5740456 | Msa0585210:CDS | 35.0% |
| CATGTCTCAGGAAAAGAAAA+TGG | + | chr4_2:5740629-5740648 | Msa0585210:intron | 35.0% | |
| TGTAATGATGCATTCTTGTC+TGG | + | chr4_2:5740702-5740721 | Msa0585210:intron | 35.0% | |
| GTAATGATGCATTCTTGTCT+GGG | + | chr4_2:5740703-5740722 | Msa0585210:intron | 35.0% | |
| CATAGATGACAGTTGAAACA+GGG | - | chr4_2:5740813-5740832 | None:intergenic | 35.0% | |
| TCATAGATGACAGTTGAAAC+AGG | - | chr4_2:5740814-5740833 | None:intergenic | 35.0% | |
| TTGTAGAATTACCGAGTAAC+AGG | + | chr4_2:5740908-5740927 | Msa0585210:intron | 35.0% | |
| GTAACAGGAAAAACTACATC+AGG | + | chr4_2:5740923-5740942 | Msa0585210:intron | 35.0% | |
| AACAGGAAAAACTACATCAG+GGG | + | chr4_2:5740925-5740944 | Msa0585210:intron | 35.0% | |
| GACGCGAAAAAAGTAAACAA+AGG | - | chr4_2:5740985-5741004 | None:intergenic | 35.0% | |
| !! | AGTGGACTAAGAATGAAAGT+AGG | - | chr4_2:5741051-5741070 | None:intergenic | 35.0% |
| ! | TCACAAATTGGTAGCAAAAG+TGG | - | chr4_2:5741069-5741088 | None:intergenic | 35.0% |
| CACCAAAATTAGACTCTTGT+TGG | + | chr4_2:5741135-5741154 | Msa0585210:intron | 35.0% | |
| ! | TGCCAACAAGAGTCTAATTT+TGG | - | chr4_2:5741140-5741159 | None:intergenic | 35.0% |
| !!! | ATCCTTTTTCAGTGTCAAGT+TGG | - | chr4_2:5741378-5741397 | None:intergenic | 35.0% |
| ! | GTGAAACTCAAGGAATGTTT+TGG | - | chr4_2:5741471-5741490 | None:intergenic | 35.0% |
| AGAAATCACACTAGAGTAGT+TGG | + | chr4_2:5741572-5741591 | Msa0585210:intron | 35.0% | |
| TGCCTTAAATTATCCCATGT+TGG | + | chr4_2:5741676-5741695 | Msa0585210:CDS | 35.0% | |
| CTCCAACATGGGATAATTTA+AGG | - | chr4_2:5741681-5741700 | None:intergenic | 35.0% | |
| CTTAAATTATCCCATGTTGG+AGG | + | chr4_2:5741679-5741698 | Msa0585210:CDS | 35.0% | |
| ! | CTAAGGCTCTTTTCTTGATA+TGG | - | chr4_2:5742165-5742184 | None:intergenic | 35.0% |
| CTTGTTAAATTTGGAGAACC+CGG | + | chr4_2:5742254-5742273 | Msa0585210:intron | 35.0% | |
| TGTTGGAACAATACTGACAT+GGG | - | chr4_2:5742326-5742345 | None:intergenic | 35.0% | |
| TTGTTGGAACAATACTGACA+TGG | - | chr4_2:5742327-5742346 | None:intergenic | 35.0% | |
| AATATTATGTTACCGGGGTT+TGG | + | chr4_2:5742417-5742436 | Msa0585210:intron | 35.0% | |
| TGCTTAAAGCTTCACTATAC+CGG | - | chr4_2:5742460-5742479 | None:intergenic | 35.0% | |
| ACAAGGTAGAACTATGATAC+CGG | - | chr4_2:5742589-5742608 | None:intergenic | 35.0% | |
| !!! | AAGACAGCTCTTTTTTATCC+GGG | - | chr4_2:5742649-5742668 | None:intergenic | 35.0% |
| ! | GGGCTTTTCAGTTTAAACTA+TGG | + | chr4_2:5742703-5742722 | Msa0585210:CDS | 35.0% |
| AAAGAAGATTTCAGGCAAGA+AGG | - | chr4_2:5742947-5742966 | None:intergenic | 35.0% | |
| ACTAAATCTCACTGCAAACT+TGG | + | chr4_2:5743047-5743066 | Msa0585210:CDS | 35.0% | |
| CTAAATCTCACTGCAAACTT+GGG | + | chr4_2:5743048-5743067 | Msa0585210:CDS | 35.0% | |
| ACAGATCTGAACTTCCTAAT+TGG | + | chr4_2:5743190-5743209 | Msa0585210:CDS | 35.0% | |
| CAATTTGCCTCATACAGTTT+GGG | - | chr4_2:5743217-5743236 | None:intergenic | 35.0% | |
| AAGATTTACATAGTTCCCAG+AGG | - | chr4_2:5743364-5743383 | None:intergenic | 35.0% | |
| TTGTTGATCATTACATGTGC+AGG | + | chr4_2:5743634-5743653 | Msa0585210:intron | 35.0% | |
| !! | CACCATATATCATTGGTTTG+CGG | - | chr4_2:5743793-5743812 | None:intergenic | 35.0% |
| CTTGTAGCACCATATATCAT+TGG | - | chr4_2:5743800-5743819 | None:intergenic | 35.0% | |
| !! | CAATGATATATGGTGCTACA+AGG | + | chr4_2:5743798-5743817 | Msa0585210:CDS | 35.0% |
| !!! | GTCTTTTGAAGCTGTGTTTT+GGG | + | chr4_2:5743841-5743860 | Msa0585210:intron | 35.0% |
| !!! | TCTTTTGAAGCTGTGTTTTG+GGG | + | chr4_2:5743842-5743861 | Msa0585210:intron | 35.0% |
| ! | GAATTTTTGTCCTCTCAACA+TGG | - | chr4_2:5743911-5743930 | None:intergenic | 35.0% |
| CTAACCTAATGAAACTCGTA+AGG | - | chr4_2:5744119-5744138 | None:intergenic | 35.0% | |
| ! | GCATCGTTTCTTTTATTCTC+AGG | + | chr4_2:5744278-5744297 | Msa0585210:intron | 35.0% |
| ! | CGTTTCTTTTATTCTCAGGT+TGG | + | chr4_2:5744282-5744301 | Msa0585210:intron | 35.0% |
| AGTTAGCGTAACATACAACA+GGG | - | chr4_2:5744456-5744475 | None:intergenic | 35.0% | |
| AAGTTAGCGTAACATACAAC+AGG | - | chr4_2:5744457-5744476 | None:intergenic | 35.0% | |
| TTCAATTTGTAGGATGGGTA+TGG | - | chr4_2:5744517-5744536 | None:intergenic | 35.0% | |
| !! | CATTTGTTTGTTGTGGAAAG+TGG | + | chr4_2:5744547-5744566 | Msa0585210:intron | 35.0% |
| ACTAGCATTCAAGGAGTTTA+TGG | + | chr4_2:5744831-5744850 | Msa0585210:intron | 35.0% | |
| AGATGTATTACTCAACCAAG+AGG | + | chr4_2:5744885-5744904 | Msa0585210:CDS | 35.0% | |
| CAAATTACCACAAGTGCAAT+AGG | - | chr4_2:5744975-5744994 | None:intergenic | 35.0% | |
| GATAACACATTGACAACTTC+AGG | - | chr4_2:5745038-5745057 | None:intergenic | 35.0% | |
| GTTGTCAATGTGTTATCTTG+GGG | + | chr4_2:5745041-5745060 | Msa0585210:intron | 35.0% | |
| !! | GAAGGGAACTTCTTTTAAGT+AGG | - | chr4_2:5745679-5745698 | None:intergenic | 35.0% |
| ATTCGAACAAACAAGCAACT+TGG | - | chr4_2:5745773-5745792 | None:intergenic | 35.0% | |
| ! | TTGTTCGAATGAAGTACTCT+AGG | + | chr4_2:5745783-5745802 | Msa0585210:intron | 35.0% |
| ! | AAGTACTCTAGGAAGACATT+AGG | + | chr4_2:5745794-5745813 | Msa0585210:intron | 35.0% |
| !! | GAAGACATTAGGTTTGTTGA+AGG | + | chr4_2:5745805-5745824 | Msa0585210:intron | 35.0% |
| AGGAAATGGAAGAAAGAGAA+AGG | + | chr4_2:5745825-5745844 | Msa0585210:intron | 35.0% | |
| AACATGAATTCCTCACAACA+TGG | - | chr4_2:5745927-5745946 | None:intergenic | 35.0% | |
| TGTTGTGAGGAATTCATGTT+AGG | + | chr4_2:5745927-5745946 | Msa0585210:intron | 35.0% | |
| AAATGGAAAGAATGCTGATG+CGG | + | chr4_2:5745964-5745983 | Msa0585210:intron | 35.0% | |
| GAGTAAAAGCAAACTACAGA+AGG | - | chr4_2:5746165-5746184 | None:intergenic | 35.0% | |
| ! | AGATCAGTGATGGAAAAACA+AGG | - | chr4_2:5746206-5746225 | None:intergenic | 35.0% |
| AGTTGTCTTCATGCAATACT+TGG | - | chr4_2:5746265-5746284 | None:intergenic | 35.0% | |
| AAATTCTCAAGCATGGCATT+GGG | - | chr4_2:5746333-5746352 | None:intergenic | 35.0% | |
| AAAATTCTCAAGCATGGCAT+TGG | - | chr4_2:5746334-5746353 | None:intergenic | 35.0% | |
| GCATATATAGATTGAGACCT+TGG | - | chr4_2:5746379-5746398 | None:intergenic | 35.0% | |
| CAACTCAATTCCAATTCAAC+AGG | - | chr4_2:5746532-5746551 | None:intergenic | 35.0% | |
| ! | GTTGTTGATTGAGAACTAAC+TGG | + | chr4_2:5746548-5746567 | Msa0585210:intron | 35.0% |
| TGCAAAAGGGATGGTTTATA+TGG | + | chr4_2:5746699-5746718 | Msa0585210:CDS | 35.0% | |
| ! | GGTTCCTTTTTAATCACATG+AGG | - | chr4_2:5746991-5747010 | None:intergenic | 35.0% |
| ATTAAAAAGGAACCATGCAG+TGG | + | chr4_2:5746997-5747016 | Msa0585210:three_prime_UTR | 35.0% | |
| TCTCTTGTACTGTATATTCG+TGG | - | chr4_2:5747269-5747288 | None:intergenic | 35.0% | |
| TTCATCGAAATCATGGGACA+CGG | + | chr4_2:5738394-5738413 | Msa0585210:exon | 40.0% | |
| !!! | GCGGCTTTGAACTTTTTGAA+GGG | - | chr4_2:5738530-5738549 | None:intergenic | 40.0% |
| !!! | AGCGGCTTTGAACTTTTTGA+AGG | - | chr4_2:5738531-5738550 | None:intergenic | 40.0% |
| ATCACACAAATCGTCCTCTT+TGG | + | chr4_2:5739209-5739228 | Msa0585210:CDS | 40.0% | |
| TCACACAAATCGTCCTCTTT+GGG | + | chr4_2:5739210-5739229 | Msa0585210:CDS | 40.0% | |
| ACAAAGGAGAGAAAGTCTCA+AGG | - | chr4_2:5739258-5739277 | None:intergenic | 40.0% | |
| ! | GATTTACACACCTCTGGAAA+TGG | - | chr4_2:5739622-5739641 | None:intergenic | 40.0% |
| TCACATGATTTACACACCTC+TGG | - | chr4_2:5739628-5739647 | None:intergenic | 40.0% | |
| !! | AGGTATTGAAGACATTGCTC+AGG | + | chr4_2:5739725-5739744 | Msa0585210:intron | 40.0% |
| ! | GGTATTGAAGACATTGCTCA+GGG | + | chr4_2:5739726-5739745 | Msa0585210:intron | 40.0% |
| ! | GTGATCACATCCTTTGTTTG+TGG | + | chr4_2:5739788-5739807 | Msa0585210:intron | 40.0% |
| ! | GATCACATCCTTTGTTTGTG+GGG | + | chr4_2:5739790-5739809 | Msa0585210:intron | 40.0% |
| ! | GATCCTTGTTTATTCTTGGC+GGG | + | chr4_2:5739889-5739908 | Msa0585210:intron | 40.0% |
| AAACCCGCCAAGAATAAACA+AGG | - | chr4_2:5739895-5739914 | None:intergenic | 40.0% | |
| GGCCTGTTTCGTGTATAATA+TGG | + | chr4_2:5739990-5740009 | Msa0585210:intron | 40.0% | |
| !! | AATATGGTTTGGTGACCTGA+TGG | + | chr4_2:5740006-5740025 | Msa0585210:intron | 40.0% |
| AGTACGAAAACCTATCCATC+AGG | - | chr4_2:5740024-5740043 | None:intergenic | 40.0% | |
| GATTCCATGTTGTATTCGAC+TGG | + | chr4_2:5740127-5740146 | Msa0585210:intron | 40.0% | |
| GAAACCAGTCGAATACAACA+TGG | - | chr4_2:5740134-5740153 | None:intergenic | 40.0% | |
| TTGCAGTTTATACACCCTCT+TGG | + | chr4_2:5740240-5740259 | Msa0585210:intron | 40.0% | |
| TGCAGTTTATACACCCTCTT+GGG | + | chr4_2:5740241-5740260 | Msa0585210:intron | 40.0% | |
| !!! | CCCTGTTGCTGTTTTTGTTT+AGG | + | chr4_2:5740296-5740315 | Msa0585210:intron | 40.0% |
| CCCTAAACAAAAACAGCAAC+AGG | - | chr4_2:5740300-5740319 | None:intergenic | 40.0% | |
| !! | GTTTTTGTTTAGGGCACTCA+TGG | + | chr4_2:5740306-5740325 | Msa0585210:intron | 40.0% |
| ! | AAAGCACTAGGTGAGATTGA+AGG | + | chr4_2:5740348-5740367 | Msa0585210:CDS | 40.0% |
| GCTAAATCAAGCAGAAGTAG+CGG | + | chr4_2:5740386-5740405 | Msa0585210:CDS | 40.0% | |
| CAAATCTAGATTACCTGAGC+AGG | - | chr4_2:5740453-5740472 | None:intergenic | 40.0% | |
| ACAGGAAAAACTACATCAGG+GGG | + | chr4_2:5740926-5740945 | Msa0585210:intron | 40.0% | |
| GACCAACTTGACACTGAAAA+AGG | + | chr4_2:5741373-5741392 | Msa0585210:intron | 40.0% | |
| GCTTATTGTCGTGAAACTCA+AGG | - | chr4_2:5741481-5741500 | None:intergenic | 40.0% | |
| AAGTCATACTCCTCCAACAT+GGG | - | chr4_2:5741692-5741711 | None:intergenic | 40.0% | |
| ATGTTTGGAAATGGTATGGC+TGG | + | chr4_2:5742189-5742208 | Msa0585210:CDS | 40.0% | |
| ACAAGGTAAGAATGCAATGC+CGG | - | chr4_2:5742239-5742258 | None:intergenic | 40.0% | |
| CGGGTTCTCCAAATTTAACA+AGG | - | chr4_2:5742256-5742275 | None:intergenic | 40.0% | |
| AGTTATGCTAATCCAAACCC+CGG | - | chr4_2:5742432-5742451 | None:intergenic | 40.0% | |
| ! | GGATTAGCATAACTTAGTGC+CGG | + | chr4_2:5742438-5742457 | Msa0585210:intron | 40.0% |
| ! | ATTTTATCATCTGCCCCTTC+AGG | + | chr4_2:5742552-5742571 | Msa0585210:intron | 40.0% |
| ! | GGTATCATAGTTCTACCTTG+TGG | + | chr4_2:5742588-5742607 | Msa0585210:CDS | 40.0% |
| CTGTTCTTATGAGTCGTACA+TGG | + | chr4_2:5742967-5742986 | Msa0585210:intron | 40.0% | |
| TCGTACATGGCATGATAAAC+AGG | + | chr4_2:5742980-5742999 | Msa0585210:intron | 40.0% | |
| ! | ACTTTTCGAAACATATGGGC+AGG | - | chr4_2:5743017-5743036 | None:intergenic | 40.0% |
| ! | CATACAGTTTGGGACCAATT+AGG | - | chr4_2:5743207-5743226 | None:intergenic | 40.0% |
| AATTGGTCCCAAACTGTATG+AGG | + | chr4_2:5743207-5743226 | Msa0585210:CDS | 40.0% | |
| CCAATTTGCCTCATACAGTT+TGG | - | chr4_2:5743218-5743237 | None:intergenic | 40.0% | |
| CCAAACTGTATGAGGCAAAT+TGG | + | chr4_2:5743215-5743234 | Msa0585210:CDS | 40.0% | |
| ACTGTATGAGGCAAATTGGT+TGG | + | chr4_2:5743219-5743238 | Msa0585210:CDS | 40.0% | |
| TGGTTGGATCTTGTAAAAGG+TGG | + | chr4_2:5743235-5743254 | Msa0585210:CDS | 40.0% | |
| ATGTACAGTGTGCTGAAGTA+TGG | + | chr4_2:5743269-5743288 | Msa0585210:CDS | 40.0% | |
| TTCAAGCAAGCAAGTGAACT+TGG | - | chr4_2:5743524-5743543 | None:intergenic | 40.0% | |
| TCGCATGCTCGGAATTTATT+TGG | - | chr4_2:5743677-5743696 | None:intergenic | 40.0% | |
| TTATGAGAAACTCGCATGCT+CGG | - | chr4_2:5743688-5743707 | None:intergenic | 40.0% | |
| AATTACCATGAAAGGGAACG+TGG | + | chr4_2:5743707-5743726 | Msa0585210:CDS | 40.0% | |
| CTCCGCAAACCAATGATATA+TGG | + | chr4_2:5743788-5743807 | Msa0585210:CDS | 40.0% | |
| !!! | CGTCTTTTGAAGCTGTGTTT+TGG | + | chr4_2:5743840-5743859 | Msa0585210:intron | 40.0% |
| TCTCAACATGGCTGCAAATA+AGG | - | chr4_2:5743899-5743918 | None:intergenic | 40.0% | |
| TTATTTGCAGCCATGTTGAG+AGG | + | chr4_2:5743898-5743917 | Msa0585210:intron | 40.0% | |
| AACAGTATTCACGTCTTTGC+TGG | - | chr4_2:5743949-5743968 | None:intergenic | 40.0% | |
| GAAAACAGGAACAGATACCT+TGG | - | chr4_2:5743979-5743998 | None:intergenic | 40.0% | |
| !! | ACTGGTCTAGCATTTTGTTG+AGG | + | chr4_2:5744064-5744083 | Msa0585210:intron | 40.0% |
| ATTCAGATCTCTTCACATGC+TGG | + | chr4_2:5744342-5744361 | Msa0585210:CDS | 40.0% | |
| ! | TCAATAATGCCTTTTGCCAG+TGG | + | chr4_2:5744617-5744636 | Msa0585210:intron | 40.0% |
| ! | CAATAATGCCTTTTGCCAGT+GGG | + | chr4_2:5744618-5744637 | Msa0585210:intron | 40.0% |
| TGATCAGGGTTACAGCTTTA+AGG | + | chr4_2:5744922-5744941 | Msa0585210:CDS | 40.0% | |
| TGTTCGCCAAATGAGATTGT+AGG | + | chr4_2:5745866-5745885 | Msa0585210:intron | 40.0% | |
| GATTGTAGGCTTAAATGGGT+AGG | + | chr4_2:5745880-5745899 | Msa0585210:intron | 40.0% | |
| AATTCCTCACAACATGGTCT+TGG | - | chr4_2:5745921-5745940 | None:intergenic | 40.0% | |
| CAGAGAACATTGTTCTCTGT+AGG | + | chr4_2:5746103-5746122 | Msa0585210:intron | 40.0% | |
| TCTTCATGCAATACTTGGCA+CGG | - | chr4_2:5746260-5746279 | None:intergenic | 40.0% | |
| TAAAAAACCTGCTCGAACTG+TGG | + | chr4_2:5746306-5746325 | Msa0585210:intron | 40.0% | |
| ! | GCCATGCTTGAGAATTTTGT+TGG | + | chr4_2:5746336-5746355 | Msa0585210:intron | 40.0% |
| GCCAACAAAATTCTCAAGCA+TGG | - | chr4_2:5746340-5746359 | None:intergenic | 40.0% | |
| ! | AGACCTTGGCAAGATAGTTT+TGG | - | chr4_2:5746365-5746384 | None:intergenic | 40.0% |
| AAGTGAGATCCTTCATCAGA+TGG | - | chr4_2:5746451-5746470 | None:intergenic | 40.0% | |
| TCATCATCTCGATGATCAAC+TGG | + | chr4_2:5746477-5746496 | Msa0585210:CDS | 40.0% | |
| CAATTCAACAGGGATACAGA+TGG | - | chr4_2:5746521-5746540 | None:intergenic | 40.0% | |
| CATCTGTATCCCTGTTGAAT+TGG | + | chr4_2:5746519-5746538 | Msa0585210:CDS | 40.0% | |
| CCAGCATTCAAATACCTGAT+AGG | - | chr4_2:5746580-5746599 | None:intergenic | 40.0% | |
| CCTATCAGGTATTTGAATGC+TGG | + | chr4_2:5746577-5746596 | Msa0585210:intron | 40.0% | |
| ! | TTTGAATGCTGGTGATGATG+CGG | + | chr4_2:5746588-5746607 | Msa0585210:intron | 40.0% |
| GGATGGTTTATATGGAGTAC+AGG | + | chr4_2:5746707-5746726 | Msa0585210:CDS | 40.0% | |
| ACTTGAGATGTACTAGCACA+AGG | - | chr4_2:5746772-5746791 | None:intergenic | 40.0% | |
| ! | CTAGTACATCTCAAGTTGCT+AGG | + | chr4_2:5746776-5746795 | Msa0585210:intron | 40.0% |
| TTTCTTCCCTATGCAGTACT+GGG | + | chr4_2:5746875-5746894 | Msa0585210:intron | 40.0% | |
| TGTCTCTTTGCTGGATCTTT+CGG | - | chr4_2:5746932-5746951 | None:intergenic | 40.0% | |
| AATAAGTGGTGTCTCTTTGC+TGG | - | chr4_2:5746941-5746960 | None:intergenic | 40.0% | |
| ATCCAAACATCAACCATGTG+TGG | - | chr4_2:5747169-5747188 | None:intergenic | 40.0% | |
| GTCGTCATCGTAAGCATCAT+CGG | - | chr4_2:5738661-5738680 | None:intergenic | 45.0% | |
| GATGATGCTTACGATGACGA+CGG | + | chr4_2:5738660-5738679 | Msa0585210:CDS | 45.0% | |
| CCGCTCGGGTTTATTGTAAA+GGG | - | chr4_2:5738950-5738969 | None:intergenic | 45.0% | |
| CCCTTTACAATAAACCCGAG+CGG | + | chr4_2:5738947-5738966 | Msa0585210:intron | 45.0% | |
| TCCGCTCGGGTTTATTGTAA+AGG | - | chr4_2:5738951-5738970 | None:intergenic | 45.0% | |
| AGAGGACGATTTGTGTGATC+CGG | - | chr4_2:5739208-5739227 | None:intergenic | 45.0% | |
| !! | TTGTATTCGTGCATCGACTC+AGG | - | chr4_2:5739412-5739431 | None:intergenic | 45.0% |
| TGTGGAATCTCCATTTCCAG+AGG | + | chr4_2:5739609-5739628 | Msa0585210:CDS | 45.0% | |
| ATGATGCTATATCGCGAGCA+AGG | + | chr4_2:5739749-5739768 | Msa0585210:CDS | 45.0% | |
| ATCACCATGGGTATAGAGAC+AGG | - | chr4_2:5739852-5739871 | None:intergenic | 45.0% | |
| ! | TCTATACCCATGGTGATGAG+CGG | + | chr4_2:5739855-5739874 | Msa0585210:intron | 45.0% |
| GAAACAGGCCCAATAGTGAT+GGG | - | chr4_2:5739980-5739999 | None:intergenic | 45.0% | |
| !! | GTATTCGACTGGTTTCTCGT+AGG | + | chr4_2:5740138-5740157 | Msa0585210:intron | 45.0% |
| CAGGAAAAACTACATCAGGG+GGG | + | chr4_2:5740927-5740946 | Msa0585210:intron | 45.0% | |
| GAAGTCATACTCCTCCAACA+TGG | - | chr4_2:5741693-5741712 | None:intergenic | 45.0% | |
| TTAGTTCCATCTCGAGGTCT+GGG | - | chr4_2:5742123-5742142 | None:intergenic | 45.0% | |
| ! | TTTAGTTCCATCTCGAGGTC+TGG | - | chr4_2:5742124-5742143 | None:intergenic | 45.0% |
| ! | CTCTTTTCTTGATATGGCCG+TGG | - | chr4_2:5742159-5742178 | None:intergenic | 45.0% |
| ! | ATAGTTCTACCTTGTGGTGC+CGG | + | chr4_2:5742594-5742613 | Msa0585210:CDS | 45.0% |
| AACACCAACTAGGGACTTTC+CGG | - | chr4_2:5742616-5742635 | None:intergenic | 45.0% | |
| AGCTGCTGAAACACCAACTA+GGG | - | chr4_2:5742625-5742644 | None:intergenic | 45.0% | |
| AAGCTGCTGAAACACCAACT+AGG | - | chr4_2:5742626-5742645 | None:intergenic | 45.0% | |
| !!! | TGGTTGCTTTTGGGGGTAAA+CGG | + | chr4_2:5742820-5742839 | Msa0585210:CDS | 45.0% |
| ! | AGAATGGGGATTGCTGCTTA+TGG | + | chr4_2:5742884-5742903 | Msa0585210:CDS | 45.0% |
| GCATGATAAACAGGTGCATG+TGG | + | chr4_2:5742989-5743008 | Msa0585210:intron | 45.0% | |
| TTCACTCAGCAAAGAGGCTT+TGG | - | chr4_2:5743122-5743141 | None:intergenic | 45.0% | |
| AGAGAACTCCAAGAAGAGAC+AGG | + | chr4_2:5743333-5743352 | Msa0585210:CDS | 45.0% | |
| ATGATCTTCACACATGCGCA+AGG | + | chr4_2:5743561-5743580 | Msa0585210:intron | 45.0% | |
| TATCACCACGTTCCCTTTCA+TGG | - | chr4_2:5743715-5743734 | None:intergenic | 45.0% | |
| !! | CATTGGTTTGCGGAGTTTCA+TGG | - | chr4_2:5743783-5743802 | None:intergenic | 45.0% |
| !! | TCTCTTCACATGCTGGTTCA+AGG | + | chr4_2:5744349-5744368 | Msa0585210:CDS | 45.0% |
| TTGTTGTGGAAAGTGGGAAG+TGG | + | chr4_2:5744554-5744573 | Msa0585210:intron | 45.0% | |
| TGTTGTGGAAAGTGGGAAGT+GGG | + | chr4_2:5744555-5744574 | Msa0585210:intron | 45.0% | |
| TAAATGGCAGGGAAAGCTTC+AGG | + | chr4_2:5744666-5744685 | Msa0585210:intron | 45.0% | |
| ! | AATTTGAGACTGAGGGAGAG+TGG | + | chr4_2:5746038-5746057 | Msa0585210:intron | 45.0% |
| ! | ATTTGAGACTGAGGGAGAGT+GGG | + | chr4_2:5746039-5746058 | Msa0585210:intron | 45.0% |
| CTTCATGCAATACTTGGCAC+GGG | - | chr4_2:5746259-5746278 | None:intergenic | 45.0% | |
| !!! | CCTTGGCAAGATAGTTTTGG+CGG | - | chr4_2:5746362-5746381 | None:intergenic | 45.0% |
| TGAGATCCTTCATCAGATGG+AGG | - | chr4_2:5746448-5746467 | None:intergenic | 45.0% | |
| GATGATCAACTGGCACTACT+CGG | + | chr4_2:5746487-5746506 | Msa0585210:CDS | 45.0% | |
| CTAACTGGCGTTTACCTATC+AGG | + | chr4_2:5746563-5746582 | Msa0585210:intron | 45.0% | |
| !! | AAAAGTGCTCGTCGTTCTCA+AGG | + | chr4_2:5746655-5746674 | Msa0585210:CDS | 45.0% |
| AGTGCAATGTCAGGTGCAAA+AGG | + | chr4_2:5746685-5746704 | Msa0585210:CDS | 45.0% | |
| GTGCAATGTCAGGTGCAAAA+GGG | + | chr4_2:5746686-5746705 | Msa0585210:CDS | 45.0% | |
| AATGTCAGGTGCAAAAGGGA+TGG | + | chr4_2:5746690-5746709 | Msa0585210:CDS | 45.0% | |
| GTTTCTTCCCTATGCAGTAC+TGG | + | chr4_2:5746874-5746893 | Msa0585210:intron | 45.0% | |
| GTTATGCCCAGTACTGCATA+GGG | - | chr4_2:5746884-5746903 | None:intergenic | 45.0% | |
| TGTTATGCCCAGTACTGCAT+AGG | - | chr4_2:5746885-5746904 | None:intergenic | 45.0% | |
| ! | TGCAGTACTGGGCATAACAA+AGG | + | chr4_2:5746886-5746905 | Msa0585210:intron | 45.0% |
| AACATCAACCATGTGTGGTG+TGG | - | chr4_2:5747164-5747183 | None:intergenic | 45.0% | |
| ! | CACCACACATGGTTGATGTT+TGG | + | chr4_2:5747164-5747183 | Msa0585210:three_prime_UTR | 45.0% |
| !!! | AAAAAAAAAAGTATAAAATA+AGG | - | chr4_2:5738734-5738753 | None:intergenic | 5.0% |
| !!! | ATTTTATACTTTTTTTTTTT+CGG | + | chr4_2:5738735-5738754 | Msa0585210:intron | 5.0% |
| !! | AAATATTATAAAAGAAAATT+CGG | - | chr4_2:5738817-5738836 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAACTATAAAT+AGG | - | chr4_2:5741868-5741887 | None:intergenic | 5.0% |
| !! | AAAAATAATAAGTAAATTTA+AGG | + | chr4_2:5742011-5742030 | Msa0585210:intron | 5.0% |
| !!! | AAATTTTATTTTAAATTGAT+TGG | + | chr4_2:5742278-5742297 | Msa0585210:intron | 5.0% |
| !!! | TTTTTTTTTATTTATTTAAC+AGG | + | chr4_2:5746408-5746427 | Msa0585210:intron | 5.0% |
| CCATTGTCACAAGCCCAAAG+AGG | - | chr4_2:5739226-5739245 | None:intergenic | 50.0% | |
| CCTCTTTGGGCTTGTGACAA+TGG | + | chr4_2:5739223-5739242 | Msa0585210:CDS | 50.0% | |
| ! | TTTGTACCTGCAAACGGGCT+CGG | - | chr4_2:5739314-5739333 | None:intergenic | 50.0% |
| TTCGCTGTATGCTGCGGTTT+CGG | + | chr4_2:5739444-5739463 | Msa0585210:CDS | 50.0% | |
| ACCATGGGTATAGAGACAGG+CGG | - | chr4_2:5739849-5739868 | None:intergenic | 50.0% | |
| !! | CCAATAGTGATGGGTGAGGA+GGG | - | chr4_2:5739971-5739990 | None:intergenic | 50.0% |
| CCTCCTCACCCATCACTATT+GGG | + | chr4_2:5739969-5739988 | Msa0585210:intron | 50.0% | |
| CGAAACAGGCCCAATAGTGA+TGG | - | chr4_2:5739981-5740000 | None:intergenic | 50.0% | |
| !! | GGTTTGGTGACCTGATGGAT+AGG | + | chr4_2:5740011-5740030 | Msa0585210:intron | 50.0% |
| TCTAACCCACTCTTACAGGC+TGG | - | chr4_2:5740087-5740106 | None:intergenic | 50.0% | |
| TGGGTCTAACCCACTCTTAC+AGG | - | chr4_2:5740091-5740110 | None:intergenic | 50.0% | |
| TAGGGGATGGAATCCCAAGA+GGG | - | chr4_2:5740257-5740276 | None:intergenic | 50.0% | |
| ATAGGGGATGGAATCCCAAG+AGG | - | chr4_2:5740258-5740277 | None:intergenic | 50.0% | |
| ! | GTTTAGGGCACTCATGGAGA+TGG | + | chr4_2:5740312-5740331 | Msa0585210:intron | 50.0% |
| GATTGGGTCGTTCATGTCTC+AGG | + | chr4_2:5740617-5740636 | Msa0585210:intron | 50.0% | |
| ! | TATGGCTGGCAGCTTTTGCA+AGG | + | chr4_2:5742203-5742222 | Msa0585210:CDS | 50.0% |
| ! | ATGGCTGGCAGCTTTTGCAA+GGG | + | chr4_2:5742204-5742223 | Msa0585210:CDS | 50.0% |
| ! | TTTGCAAGGGCATGTGTCAC+CGG | + | chr4_2:5742217-5742236 | Msa0585210:CDS | 50.0% |
| GGATCTTGCTCTACCTGAAG+GGG | - | chr4_2:5742568-5742587 | None:intergenic | 50.0% | |
| CGGATCTTGCTCTACCTGAA+GGG | - | chr4_2:5742569-5742588 | None:intergenic | 50.0% | |
| CCTTCAGGTAGAGCAAGATC+CGG | + | chr4_2:5742567-5742586 | Msa0585210:intron | 50.0% | |
| ! | TTGGTGTTTCAGCAGCTTCC+CGG | + | chr4_2:5742628-5742647 | Msa0585210:CDS | 50.0% |
| GGCAACAAATGCTGTCTCTG+TGG | + | chr4_2:5742674-5742693 | Msa0585210:CDS | 50.0% | |
| ATGCTGTCTCTGTGGATCAG+TGG | + | chr4_2:5742682-5742701 | Msa0585210:CDS | 50.0% | |
| TGCTGTCTCTGTGGATCAGT+GGG | + | chr4_2:5742683-5742702 | Msa0585210:CDS | 50.0% | |
| GACAGCAAAGAGAGATTCCG+TGG | + | chr4_2:5742765-5742784 | Msa0585210:CDS | 50.0% | |
| CAACAACTCCAGCGTTACCA+CGG | - | chr4_2:5742785-5742804 | None:intergenic | 50.0% | |
| ACAGGTATGCCGTTATGCAC+TGG | + | chr4_2:5743074-5743093 | Msa0585210:intron | 50.0% | |
| TGCAGCTACACTTGTGAGAG+AGG | + | chr4_2:5743156-5743175 | Msa0585210:intron | 50.0% | |
| AGGCTTCACCTGTCTCTTCT+TGG | - | chr4_2:5743344-5743363 | None:intergenic | 50.0% | |
| AAGAGACAGGTGAAGCCTCT+GGG | + | chr4_2:5743346-5743365 | Msa0585210:intron | 50.0% | |
| GCGGAGTTTCATGGCATACT+CGG | - | chr4_2:5743774-5743793 | None:intergenic | 50.0% | |
| !! | TATGGTGCTACAAGGTGCTG+TGG | + | chr4_2:5743806-5743825 | Msa0585210:intron | 50.0% |
| AGCGTCTGGGTCGTATTCTT+AGG | + | chr4_2:5744385-5744404 | Msa0585210:CDS | 50.0% | |
| GCGTCTGGGTCGTATTCTTA+GGG | + | chr4_2:5744386-5744405 | Msa0585210:CDS | 50.0% | |
| GGGTCGTATTCTTAGGGCAA+AGG | + | chr4_2:5744392-5744411 | Msa0585210:CDS | 50.0% | |
| GGGAAAGCTTCAGGATAGGA+TGG | + | chr4_2:5744675-5744694 | Msa0585210:intron | 50.0% | |
| AAGCTTCAGGATAGGATGGC+TGG | + | chr4_2:5744679-5744698 | Msa0585210:CDS | 50.0% | |
| CTCACTCCCTATTGCACTTG+TGG | + | chr4_2:5744965-5744984 | Msa0585210:intron | 50.0% | |
| CTGTCCAAGACCATGTTGTG+AGG | + | chr4_2:5745914-5745933 | Msa0585210:intron | 50.0% | |
| CCGCCAAAACTATCTTGCCA+AGG | + | chr4_2:5746359-5746378 | Msa0585210:intron | 50.0% | |
| AGCTTGCCTCCATCTGATGA+AGG | + | chr4_2:5746439-5746458 | Msa0585210:CDS | 50.0% | |
| TCAACTGGCACTACTCGGAA+AGG | + | chr4_2:5746492-5746511 | Msa0585210:CDS | 50.0% | |
| ! | AATGCTGGTGATGATGCGGT+TGG | + | chr4_2:5746592-5746611 | Msa0585210:intron | 50.0% |
| GGATCGATGAGTGCAATGTC+AGG | + | chr4_2:5746676-5746695 | Msa0585210:CDS | 50.0% | |
| GAGATGTACTAGCACAAGGC+AGG | - | chr4_2:5746768-5746787 | None:intergenic | 50.0% | |
| CGGCTTTGCTCTTGATCTGT+TGG | - | chr4_2:5746912-5746931 | None:intergenic | 50.0% | |
| ATTACACAGACGCCACTGCA+TGG | - | chr4_2:5747012-5747031 | None:intergenic | 50.0% | |
| CAATAAACCCGAGCGGAGCA+CGG | + | chr4_2:5738954-5738973 | Msa0585210:intron | 55.0% | |
| AATAAACCCGAGCGGAGCAC+GGG | + | chr4_2:5738955-5738974 | Msa0585210:intron | 55.0% | |
| ! | TTTTTGACCCGTGCTCCGCT+CGG | - | chr4_2:5738965-5738984 | None:intergenic | 55.0% |
| ACCGCATTCGCTGTATGCTG+CGG | + | chr4_2:5739438-5739457 | Msa0585210:CDS | 55.0% | |
| ACCGCAGCATACAGCGAATG+CGG | - | chr4_2:5739442-5739461 | None:intergenic | 55.0% | |
| CTGTATGCTGCGGTTTCGGT+TGG | + | chr4_2:5739448-5739467 | Msa0585210:CDS | 55.0% | |
| GCGAGCAAGGATCACTTCTG+AGG | + | chr4_2:5739762-5739781 | Msa0585210:CDS | 55.0% | |
| ACCGCCTGTCTCTATACCCA+TGG | + | chr4_2:5739845-5739864 | Msa0585210:intron | 55.0% | |
| CTGAAGCCGCTCATCACCAT+GGG | - | chr4_2:5739864-5739883 | None:intergenic | 55.0% | |
| CCCTCCTCACCCATCACTAT+TGG | + | chr4_2:5739968-5739987 | Msa0585210:intron | 55.0% | |
| !! | CCCAATAGTGATGGGTGAGG+AGG | - | chr4_2:5739972-5739991 | None:intergenic | 55.0% |
| !! | AGGCCCAATAGTGATGGGTG+AGG | - | chr4_2:5739975-5739994 | None:intergenic | 55.0% |
| !! | CTCTTACAGGCTGGTCTCGT+AGG | - | chr4_2:5740078-5740097 | None:intergenic | 55.0% |
| ACGAGACCAGCCTGTAAGAG+TGG | + | chr4_2:5740078-5740097 | Msa0585210:intron | 55.0% | |
| CGAGACCAGCCTGTAAGAGT+GGG | + | chr4_2:5740079-5740098 | Msa0585210:intron | 55.0% | |
| ! | GGGGCTTTAGTTCCATCTCG+AGG | - | chr4_2:5742129-5742148 | None:intergenic | 55.0% |
| CTAAAGCCCCAAGCACACCA+CGG | + | chr4_2:5742139-5742158 | Msa0585210:CDS | 55.0% | |
| ATATGGCCGTGGTGTGCTTG+GGG | - | chr4_2:5742148-5742167 | None:intergenic | 55.0% | |
| GATATGGCCGTGGTGTGCTT+GGG | - | chr4_2:5742149-5742168 | None:intergenic | 55.0% | |
| TGATATGGCCGTGGTGTGCT+TGG | - | chr4_2:5742150-5742169 | None:intergenic | 55.0% | |
| CCGGATCTTGCTCTACCTGA+AGG | - | chr4_2:5742570-5742589 | None:intergenic | 55.0% | |
| ! | GAGAGATTCCGTGGTAACGC+TGG | + | chr4_2:5742774-5742793 | Msa0585210:CDS | 55.0% |
| ! | GGGATTGCTGCTTATGGACG+AGG | + | chr4_2:5742890-5742909 | Msa0585210:CDS | 55.0% |
| CACTGCAAACTTGGGCTCAC+AGG | + | chr4_2:5743056-5743075 | Msa0585210:CDS | 55.0% | |
| GAAGAGACAGGTGAAGCCTC+TGG | + | chr4_2:5743345-5743364 | Msa0585210:intron | 55.0% | |
| ! | CGTCAAGAAGCACAGCGTCT+GGG | + | chr4_2:5744372-5744391 | Msa0585210:CDS | 55.0% |
| TTGAATCAGCGAGTGCCCAC+TGG | - | chr4_2:5744636-5744655 | None:intergenic | 55.0% | |
| GGCAGGGAAAGCTTCAGGAT+AGG | + | chr4_2:5744671-5744690 | Msa0585210:intron | 55.0% | |
| CTTCAGGATAGGATGGCTGG+TGG | + | chr4_2:5744682-5744701 | Msa0585210:CDS | 55.0% | |
| TAGGATGGCTGGTGGCAAAG+AGG | + | chr4_2:5744690-5744709 | Msa0585210:CDS | 55.0% | |
| !! | CTGGGTATCGGTCGACACAA+GGG | - | chr4_2:5744737-5744756 | None:intergenic | 55.0% |
| TGCTGATGCGGCAGAGAGAA+AGG | + | chr4_2:5745976-5745995 | Msa0585210:intron | 55.0% | |
| GCTGATGCGGCAGAGAGAAA+GGG | + | chr4_2:5745977-5745996 | Msa0585210:intron | 55.0% | |
| CTGATGCGGCAGAGAGAAAG+GGG | + | chr4_2:5745978-5745997 | Msa0585210:intron | 55.0% | |
| ATTGGGACCACAGTTCGAGC+AGG | - | chr4_2:5746316-5746335 | None:intergenic | 55.0% | |
| ! | TTTTGACCCGTGCTCCGCTC+GGG | - | chr4_2:5738964-5738983 | None:intergenic | 60.0% |
| GCTGAAGCCGCTCATCACCA+TGG | - | chr4_2:5739865-5739884 | None:intergenic | 60.0% | |
| GGTGAACCCAGACCTCGAGA+TGG | + | chr4_2:5742114-5742133 | Msa0585210:intron | 60.0% | |
| AGGGACTTTCCGGCACCACA+AGG | - | chr4_2:5742606-5742625 | None:intergenic | 60.0% | |
| ! | GGTGCCGGAAAGTCCCTAGT+TGG | + | chr4_2:5742609-5742628 | Msa0585210:CDS | 60.0% |
| ! | GCGTCAAGAAGCACAGCGTC+TGG | + | chr4_2:5744371-5744390 | Msa0585210:CDS | 60.0% |
| AGCGAGTGCCCACTGGCAAA+AGG | - | chr4_2:5744629-5744648 | None:intergenic | 60.0% | |
| !! | CCTGGGTATCGGTCGACACA+AGG | - | chr4_2:5744738-5744757 | None:intergenic | 60.0% |
| ! | CCTTGTGTCGACCGATACCC+AGG | + | chr4_2:5744735-5744754 | Msa0585210:CDS | 60.0% |
| TGAGACTGAGGGAGAGTGGG+AGG | + | chr4_2:5746042-5746061 | Msa0585210:intron | 60.0% | |
| GAGACTGAGGGAGAGTGGGA+GGG | + | chr4_2:5746043-5746062 | Msa0585210:intron | 60.0% | |
| AGACTGAGGGAGAGTGGGAG+GGG | + | chr4_2:5746044-5746063 | Msa0585210:intron | 60.0% | |
| !! | GAGAGTGGGAGGGGGTATCT+TGG | + | chr4_2:5746053-5746072 | Msa0585210:intron | 60.0% |
| CCATGTGTGGTGTGGTCACC+AGG | - | chr4_2:5747156-5747175 | None:intergenic | 60.0% | |
| CCTGGTGACCACACCACACA+TGG | + | chr4_2:5747153-5747172 | Msa0585210:three_prime_UTR | 60.0% | |
| GACTGAGGGAGAGTGGGAGG+GGG | + | chr4_2:5746045-5746064 | Msa0585210:intron | 65.0% | |
| ! | CCTGCAAACGGGCTCGGCGA+TGG | - | chr4_2:5739308-5739327 | None:intergenic | 70.0% |
| CCATCGCCGAGCCCGTTTGC+AGG | + | chr4_2:5739305-5739324 | Msa0585210:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 5738357 | 5747372 | 5738357 | ID=Msa0585210;Name=Msa0585210 |
| chr4_2 | mRNA | 5738357 | 5747372 | 5738357 | ID=Msa0585210-mRNA-1;Parent=Msa0585210;Name=Msa0585210-mRNA-1;_AED=0.25;_eAED=0.25;_QI=49|0.89|0.85|1|1|1|20|409|769 |
| chr4_2 | exon | 5738357 | 5738415 | 5738357 | ID=Msa0585210-mRNA-1:exon:1384;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5738510 | 5738559 | 5738510 | ID=Msa0585210-mRNA-1:exon:1385;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5738636 | 5738681 | 5738636 | ID=Msa0585210-mRNA-1:exon:1386;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5739167 | 5739326 | 5739167 | ID=Msa0585210-mRNA-1:exon:1387;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5739408 | 5739630 | 5739408 | ID=Msa0585210-mRNA-1:exon:1388;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5739727 | 5739783 | 5739727 | ID=Msa0585210-mRNA-1:exon:1389;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5740318 | 5740458 | 5740318 | ID=Msa0585210-mRNA-1:exon:1390;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5741644 | 5741724 | 5741644 | ID=Msa0585210-mRNA-1:exon:1391;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5742115 | 5742256 | 5742115 | ID=Msa0585210-mRNA-1:exon:1392;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5742574 | 5742911 | 5742574 | ID=Msa0585210-mRNA-1:exon:1393;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5743002 | 5743077 | 5743002 | ID=Msa0585210-mRNA-1:exon:1394;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5743161 | 5743354 | 5743161 | ID=Msa0585210-mRNA-1:exon:1395;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5743656 | 5743819 | 5743656 | ID=Msa0585210-mRNA-1:exon:1396;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5743908 | 5743980 | 5743908 | ID=Msa0585210-mRNA-1:exon:1397;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5744300 | 5744413 | 5744300 | ID=Msa0585210-mRNA-1:exon:1398;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5744676 | 5744756 | 5744676 | ID=Msa0585210-mRNA-1:exon:1399;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5744884 | 5744943 | 5744884 | ID=Msa0585210-mRNA-1:exon:1400;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5746430 | 5746547 | 5746430 | ID=Msa0585210-mRNA-1:exon:1401;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5746620 | 5746728 | 5746620 | ID=Msa0585210-mRNA-1:exon:1402;Parent=Msa0585210-mRNA-1 |
| chr4_2 | exon | 5746891 | 5747372 | 5746891 | ID=Msa0585210-mRNA-1:exon:1403;Parent=Msa0585210-mRNA-1 |
| chr4_2 | five_prime_UTR | 5738357 | 5738405 | 5738357 | ID=Msa0585210-mRNA-1:five_prime_utr;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5738406 | 5738415 | 5738406 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5738510 | 5738559 | 5738510 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5738636 | 5738681 | 5738636 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5739167 | 5739326 | 5739167 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5739408 | 5739630 | 5739408 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5739727 | 5739783 | 5739727 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5740318 | 5740458 | 5740318 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5741644 | 5741724 | 5741644 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5742115 | 5742256 | 5742115 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5742574 | 5742911 | 5742574 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5743002 | 5743077 | 5743002 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5743161 | 5743354 | 5743161 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5743656 | 5743819 | 5743656 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5743908 | 5743980 | 5743908 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5744300 | 5744413 | 5744300 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5744676 | 5744756 | 5744676 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5744884 | 5744943 | 5744884 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5746430 | 5746547 | 5746430 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5746620 | 5746728 | 5746620 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | CDS | 5746891 | 5746963 | 5746891 | ID=Msa0585210-mRNA-1:cds;Parent=Msa0585210-mRNA-1 |
| chr4_2 | three_prime_UTR | 5746964 | 5747372 | 5746964 | ID=Msa0585210-mRNA-1:three_prime_utr;Parent=Msa0585210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
