AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1063380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063380 MtrunA17_Chr7g0242611 87.701 1122 42 4 1 1028 1 1120 0.0 1923
Msa1063380 MtrunA17_Chr5g0437271 43.327 1094 510 25 29 1028 29 1106 0.0 766
Msa1063380 MtrunA17_Chr8g0370421 25.686 1129 655 34 1 1024 1 1050 4.54e-80 283
Msa1063380 MtrunA17_Chr5g0407051 40.351 114 68 0 25 138 47 160 4.42e-24 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063380 AT5G05570.2 43.212 1127 513 22 1 1028 1 1099 0.0 822
Msa1063380 AT5G05570.1 42.274 1152 513 23 1 1028 1 1124 0.0 808
Msa1063380 AT4G35560.1 25.492 1118 665 36 1 1024 1 1044 6.66e-67 244
Msa1063380 AT4G35560.2 25.469 1119 665 36 1 1024 1 1045 8.47e-67 244

Find 216 sgRNAs with CRISPR-Local

Find 594 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATTGTTGATTGCATTTC+AGG 0.092632 7_2:-55265844 Msa1063380:CDS
CTTTCTTGCACAGGCTCTTC+AGG 0.145395 7_2:+55262956 None:intergenic
GAGTTTCCTGAAGGTGTTTC+TGG 0.183985 7_2:+55263450 None:intergenic
TGTTCAAATTGGCCCTTAAC+TGG 0.191166 7_2:-55264733 Msa1063380:CDS
GTTCAGCTTCTTGTTCAAAT+TGG 0.205651 7_2:-55264744 Msa1063380:CDS
TTGTTCTGCTTCCTTGCTTC+TGG 0.232304 7_2:-55264282 Msa1063380:CDS
ATTTGTCAGCTAAATTTCTA+AGG 0.258315 7_2:-55267697 Msa1063380:CDS
GAAAAGACAATGCTACAAAA+AGG 0.264102 7_2:+55259786 None:intergenic
AGGATGGACTGCTAATTCTT+TGG 0.270386 7_2:-55265824 Msa1063380:CDS
AGACTGGAACATTTGAAATA+AGG 0.273849 7_2:-55262604 Msa1063380:intron
CGTGCAGACCTTACACTTAA+TGG 0.282163 7_2:-55265157 Msa1063380:CDS
CTCCAAACCAATGAAGTAAT+TGG 0.283599 7_2:+55263516 None:intergenic
GTACAGATCTTTACCAGATT+TGG 0.286118 7_2:-55262323 Msa1063380:intron
TCTGGAACCAAACTTGCTAT+TGG 0.293339 7_2:-55263738 Msa1063380:CDS
CCATAGTGAATCACAATTCT+TGG 0.294823 7_2:+55269181 None:intergenic
ATGTTCCAAATGACCGAAAT+TGG 0.296250 7_2:+55261698 None:intergenic
AACCTCCAATTTCGGTCATT+TGG 0.297075 7_2:-55261703 Msa1063380:CDS
GGGAGGAAATCTTGATAATT+CGG 0.300267 7_2:+55259807 None:intergenic
TGCTTCCTTGCTTCTGGCTG+TGG 0.309147 7_2:-55264276 Msa1063380:CDS
CCCATTGTAAAGAACAAATA+AGG 0.321997 7_2:+55267964 None:intergenic
GGAGGAAATCTTGATAATTC+GGG 0.322167 7_2:+55259808 None:intergenic
CGCACGGCAGACCTGCAAAA+TGG 0.323423 7_2:-55260006 Msa1063380:CDS
CCATGACTTTCCCGCAATAA+AGG 0.323471 7_2:+55266903 None:intergenic
GTTGATAATTTCCAGGCTAA+TGG 0.324986 7_2:-55262135 Msa1063380:intron
CACCAATTACTTCATTGGTT+TGG 0.328055 7_2:-55263518 Msa1063380:CDS
AACATTCAAAATCTTGCTAT+TGG 0.328585 7_2:-55262679 Msa1063380:CDS
GAAGGTGTTTCTGGTTTCCT+TGG 0.329425 7_2:+55263459 None:intergenic
TCAAACAAGAAACAAGCTTA+TGG 0.330995 7_2:-55261113 Msa1063380:CDS
GGATGGACTGCTAATTCTTT+GGG 0.332819 7_2:-55265823 Msa1063380:CDS
CCAGGCTAATGGTTCTGAAT+TGG 0.336109 7_2:-55262124 Msa1063380:intron
TCTCATCTTCATCTTTCAAT+TGG 0.339397 7_2:+55265754 None:intergenic
TCGCCTCCTGCCTTTATTGC+GGG 0.343138 7_2:-55266913 Msa1063380:CDS
AAAATTCCAACCTCCAATTT+CGG 0.346963 7_2:-55261711 Msa1063380:CDS
TCCGCCACCAGTTCCAAATC+TGG 0.348858 7_2:+55262310 None:intergenic
CAGAACACCTGAAGAAATTA+TGG 0.350563 7_2:-55261267 Msa1063380:CDS
AGATACTATTTATCTTATCT+AGG 0.352165 7_2:-55263419 Msa1063380:CDS
AGCCACTTGTCCATGGTTAA+AGG 0.352397 7_2:-55264700 Msa1063380:intron
AAGAAATAAGTGCTCTTTGT+TGG 0.355090 7_2:-55265671 Msa1063380:CDS
ACGACTGTGCCAGCGATTCT+AGG 0.356726 7_2:-55261786 Msa1063380:CDS
CAGATAAGTCACAAAGTGAT+AGG 0.361846 7_2:-55261337 Msa1063380:CDS
GAATGCTCCAGTGACAAAAT+TGG 0.364061 7_2:-55264309 Msa1063380:CDS
CTCGCTGTTGGATACTTAGA+TGG 0.366231 7_2:-55265627 Msa1063380:CDS
AAGCTCACCAATTACTTCAT+TGG 0.367596 7_2:-55263523 Msa1063380:CDS
ACCATGTGTTCCGATGATTA+TGG 0.368780 7_2:-55262235 Msa1063380:CDS
TAGATGGAGATATCCTGTTT+TGG 0.368789 7_2:-55265611 Msa1063380:CDS
TTTGCAGGTCTGCCGTGCGC+TGG 0.369771 7_2:+55260010 None:intergenic
AAGGAAGTGGAGCTTGATAT+AGG 0.374339 7_2:-55261615 Msa1063380:intron
TAGCTGGAGAAAATGAATTC+AGG 0.375722 7_2:-55262086 Msa1063380:intron
GTTAAAGATGGATTATTCAT+AGG 0.380339 7_2:+55264950 None:intergenic
TCTTCAGGTGTTCTGACCCT+TGG 0.381611 7_2:+55261275 None:intergenic
CCACCATTTCCTCCTTTCCA+TGG 0.383097 7_2:+55259942 None:intergenic
CTTTGTTGGGCATCTTCTGA+TGG 0.384102 7_2:-55265657 Msa1063380:CDS
TAAGCAGCCATAATTTCTTC+AGG 0.386811 7_2:+55261260 None:intergenic
CGGGATTCTTCTTTCTGCAT+TGG 0.389526 7_2:+55265515 None:intergenic
ATTATGAGATTTGTGACTAC+TGG 0.403349 7_2:+55265473 None:intergenic
TAGTTTACAATCAACTGAAT+TGG 0.404948 7_2:-55269206 Msa1063380:CDS
TATATTATGTTATATATTTG+TGG 0.405348 7_2:-55259853 Msa1063380:three_prime_UTR
ACTGGTCAGTTGTTTGTGTA+TGG 0.405579 7_2:-55265444 Msa1063380:CDS
CCTTATTTGTTCTTTACAAT+GGG 0.406302 7_2:-55267964 Msa1063380:CDS
CCAAGAATTGTGATTCACTA+TGG 0.406867 7_2:-55269181 Msa1063380:CDS
TGAAACAAACGCCAATCTTC+CGG 0.407195 7_2:-55265724 Msa1063380:CDS
TTAACTCTTGAATGGTCATC+GGG 0.409662 7_2:-55265205 Msa1063380:CDS
TAAAATATCAGCCGGAAGAT+TGG 0.414385 7_2:+55265713 None:intergenic
TCTTCAGAAACCACACACTC+TGG 0.415190 7_2:-55262893 Msa1063380:CDS
AGAAATAAGTGCTCTTTGTT+GGG 0.416921 7_2:-55265670 Msa1063380:CDS
AAACCCCTTGCTCCTATACT+TGG 0.419341 7_2:+55265109 None:intergenic
TTTCTTGCACAGGCTCTTCA+GGG 0.420443 7_2:+55262957 None:intergenic
ACAACTTCCTTACAAATACT+TGG 0.420654 7_2:-55268446 Msa1063380:CDS
GTGTATGGTGGTGACGAAAT+TGG 0.423490 7_2:-55265429 Msa1063380:CDS
CAAAACCAGGGATATTTAGT+TGG 0.430818 7_2:-55268247 Msa1063380:CDS
GTTCAAATTGGCCCTTAACT+GGG 0.438451 7_2:-55264732 Msa1063380:CDS
GCCTTATTTGTTCTTTACAA+TGG 0.440656 7_2:-55267965 Msa1063380:CDS
CACTTATTTCTTTATCTCCC+AGG 0.443709 7_2:+55265682 None:intergenic
TCATAATAGTGTATTTGTCC+AGG 0.446171 7_2:+55265052 None:intergenic
GCAAAAGATAATGCTTGTAC+TGG 0.446732 7_2:+55263765 None:intergenic
TAAGTATCCAACAGCGAGAA+TGG 0.448584 7_2:+55265632 None:intergenic
CATTAATGTCTGAGCAGAAT+AGG 0.450554 7_2:-55265012 Msa1063380:CDS
ACCAGATTTGGAACTGGTGG+CGG 0.450594 7_2:-55262311 Msa1063380:CDS
ACACTCTGGGGATATCCATT+TGG 0.452074 7_2:-55262879 Msa1063380:CDS
GTTGAGCTGCTTTCTTGCAC+AGG 0.454580 7_2:+55262947 None:intergenic
GACCATTGTAAGACAATGAC+CGG 0.459143 7_2:+55265495 None:intergenic
GCTTCCTTGCTTCTGGCTGT+GGG 0.461533 7_2:-55264275 Msa1063380:CDS
GCATTCATCTCATTATTAGC+TGG 0.466277 7_2:-55262102 Msa1063380:CDS
TTTAACCATGGACAAGTGGC+TGG 0.467006 7_2:+55264702 None:intergenic
ATCTTTACCAGATTTGGAAC+TGG 0.469123 7_2:-55262317 Msa1063380:CDS
GTGGTTTGTTGGCCTTTAGA+AGG 0.470784 7_2:+55265570 None:intergenic
GGTAGTAGTGGCCGATGAAA+AGG 0.471467 7_2:-55261634 Msa1063380:CDS
GAAGCTAAAATTGTGTTCCT+TGG 0.471798 7_2:-55265792 Msa1063380:CDS
AGTGTAGTTGAGGGTGATAC+TGG 0.474842 7_2:-55263384 Msa1063380:CDS
CGAAAGTGCCATTAAGTGTA+AGG 0.475049 7_2:+55265149 None:intergenic
GATGGCTCCATTCTCGCTGT+TGG 0.475285 7_2:-55265639 Msa1063380:CDS
CTTAAATGATAATGATATCC+AGG 0.479937 7_2:-55268221 Msa1063380:intron
TTCGATGAATTTAACTGACT+TGG 0.480073 7_2:+55264905 None:intergenic
TGGCAGGGATGGAAGACTTA+AGG 0.481066 7_2:-55268512 Msa1063380:intron
AGGAAACCAGAAACACCTTC+AGG 0.482972 7_2:-55263456 Msa1063380:CDS
CTTCAAAAGTTGTCCTTCCT+CGG 0.483030 7_2:+55267730 None:intergenic
TTCAAATTGGCCCTTAACTG+GGG 0.487106 7_2:-55264731 Msa1063380:CDS
CGTACCTCCAAGTATTTGTA+AGG 0.489987 7_2:+55268439 None:intergenic
GATCTTAAAGACTGCTCTGA+TGG 0.492473 7_2:-55264137 Msa1063380:CDS
CCTTTATTGCGGGAAAGTCA+TGG 0.492804 7_2:-55266903 Msa1063380:CDS
AAACAAGCTTATGGAGAGGC+AGG 0.493216 7_2:-55261104 Msa1063380:CDS
GATACTATTTATCTTATCTA+GGG 0.496579 7_2:-55263418 Msa1063380:CDS
CAAACTTTATCACAGAAAAC+AGG 0.497283 7_2:+55267756 None:intergenic
CTTCAGAAACCACACACTCT+GGG 0.497726 7_2:-55262892 Msa1063380:CDS
CAGACGACAAGTTCCAAAAC+AGG 0.497951 7_2:+55265598 None:intergenic
GATAGGGAGAAATTGTTTCA+AGG 0.499523 7_2:-55261320 Msa1063380:CDS
TGTTCCCAGCCACTTGTCCA+TGG 0.500792 7_2:-55264707 Msa1063380:CDS
TGATGAATTGATGATGATGT+TGG 0.501546 7_2:+55269383 None:intergenic
TTTGTCAGCTAAATTTCTAA+GGG 0.502655 7_2:-55267696 Msa1063380:CDS
GATGGAAGACTTAAGGTGAT+TGG 0.507610 7_2:-55268505 Msa1063380:CDS
ATTCTATCATTGCTTCAGAC+TGG 0.508271 7_2:-55262620 Msa1063380:CDS
ATTCTAGGCGGTATTGTCAA+AGG 0.509217 7_2:-55261771 Msa1063380:CDS
AGACCATGGAAAGGAGGAAA+TGG 0.509342 7_2:-55259945 Msa1063380:CDS
AGACTCCAACTAAATATCCC+TGG 0.514072 7_2:+55268242 None:intergenic
GTCCACAAAAGCATTGATAC+AGG 0.515849 7_2:-55262813 Msa1063380:intron
CTATTTATCTTATCTAGGGA+TGG 0.517108 7_2:-55263414 Msa1063380:CDS
CATGACGCTCCACAAGGAAA+AGG 0.517766 7_2:-55263825 Msa1063380:CDS
TGGAAGTGAATCTGACAAAG+AGG 0.518269 7_2:+55261662 None:intergenic
ATCGCCTCCTGCCTTTATTG+CGG 0.518686 7_2:-55266914 Msa1063380:CDS
GCTAAAATTGTGTTCCTTGG+TGG 0.519198 7_2:-55265789 Msa1063380:CDS
AAGCTTGTTTCTTGTTTGAG+AGG 0.522959 7_2:+55261117 None:intergenic
GCAGGACAAGTGGATCCAAA+TGG 0.523689 7_2:+55262864 None:intergenic
TCGTCTGCAGCACCTTCTAA+AGG 0.524578 7_2:-55265582 Msa1063380:CDS
AATTCCAGCACCTTTAACCA+TGG 0.525371 7_2:+55264690 None:intergenic
CATAATAGTGTATTTGTCCA+GGG 0.526367 7_2:+55265053 None:intergenic
TTCTAGGCGGTATTGTCAAA+GGG 0.527510 7_2:-55261770 Msa1063380:CDS
TTTAACTCTTGAATGGTCAT+CGG 0.527590 7_2:-55265206 Msa1063380:CDS
TCTTGAATGGTCATCGGGGA+TGG 0.528250 7_2:-55265200 Msa1063380:CDS
TAAGAAACCGATACGAAAAG+TGG 0.528713 7_2:-55262702 Msa1063380:CDS
GAAGTAGAAGCTGTAGTTTG+AGG 0.535734 7_2:+55261458 None:intergenic
AAAATTGTGTTCCTTGGTGG+TGG 0.536465 7_2:-55265786 Msa1063380:CDS
GCGAGAACTGAAGAAGAAGA+TGG 0.538241 7_2:+55269154 None:intergenic
CTTGCAGTTCCTACAAAACC+AGG 0.538891 7_2:-55268260 Msa1063380:intron
ATGGAATCATTAAAATGCAT+TGG 0.541425 7_2:-55265181 Msa1063380:CDS
GACTTTCCCGCAATAAAGGC+AGG 0.542141 7_2:+55266907 None:intergenic
GTAATTGGTGAGCTTGAGCT+AGG 0.545627 7_2:+55263531 None:intergenic
ACTATAATATTCAGTTATGT+CGG 0.546627 7_2:-55267791 Msa1063380:intron
TACTGCCAAGTATAGGAGCA+AGG 0.547133 7_2:-55265114 Msa1063380:CDS
ATCTTAAAGACTGCTCTGAT+GGG 0.549270 7_2:-55264136 Msa1063380:CDS
GACATCCTCTGTATCTGCGC+AGG 0.549663 7_2:-55264990 Msa1063380:CDS
TGAGGGTGATACTGGTAAAA+CGG 0.551223 7_2:-55263376 Msa1063380:intron
CTGGCTGTGGGCAATGAATG+TGG 0.552459 7_2:-55264263 Msa1063380:CDS
ACTTCCTTACAAATACTTGG+AGG 0.553928 7_2:-55268443 Msa1063380:intron
AGTGGCCGATGAAAAGGAAG+TGG 0.556924 7_2:-55261628 Msa1063380:CDS
TTTGAACAAGAAGCTGAACC+AGG 0.557074 7_2:+55264748 None:intergenic
AAATGACCGAAATTGGAGGT+TGG 0.557233 7_2:+55261705 None:intergenic
GTTTCTTGTTTGAGAGGCAA+CGG 0.558418 7_2:+55261123 None:intergenic
TTATTCATAGGTATTAGCAC+TGG 0.563489 7_2:+55264962 None:intergenic
TTCCAAATGACCGAAATTGG+AGG 0.563828 7_2:+55261701 None:intergenic
AAATCTCATAATGATTGCAC+TGG 0.566926 7_2:-55265462 Msa1063380:CDS
CACAATCTGTCCATAATCAT+CGG 0.567485 7_2:+55262225 None:intergenic
ACTGCCAAGTATAGGAGCAA+GGG 0.568001 7_2:-55265113 Msa1063380:CDS
ATAAAGTTTGATGCCGAGGA+AGG 0.569053 7_2:-55267743 Msa1063380:CDS
ACAATACCGCCTAGAATCGC+TGG 0.571926 7_2:+55261777 None:intergenic
TCGGCCACTACTACCACTGT+TGG 0.573495 7_2:+55261642 None:intergenic
TCAAATTGGCCCTTAACTGG+GGG 0.574355 7_2:-55264730 Msa1063380:CDS
TTTACCAGATTTGGAACTGG+TGG 0.575160 7_2:-55262314 Msa1063380:CDS
CAGCACAAGTTTCAGCAGCA+AGG 0.575593 7_2:-55269229 Msa1063380:CDS
TCACAGCAAAGCAGGACAAG+TGG 0.577487 7_2:+55262854 None:intergenic
GGTATTGTCAAAGGGTTGAA+AGG 0.577937 7_2:-55261762 Msa1063380:CDS
CACCTTTAACCATGGACAAG+TGG 0.579178 7_2:+55264698 None:intergenic
CTGCCAAGTATAGGAGCAAG+GGG 0.582079 7_2:-55265112 Msa1063380:CDS
ATTGGCGGTGATAACATTGA+AGG 0.582531 7_2:-55268487 Msa1063380:CDS
AGATAAGTCACAAAGTGATA+GGG 0.585441 7_2:-55261336 Msa1063380:CDS
GGTCAGTTGTTTGTGTATGG+TGG 0.585640 7_2:-55265441 Msa1063380:CDS
TCCATAATCATCGGAACACA+TGG 0.587707 7_2:+55262234 None:intergenic
TTGTTGATTGCATTTCAGGA+TGG 0.588937 7_2:-55265840 Msa1063380:CDS
GTGGAATTATAAAGTGAACA+TGG 0.590013 7_2:-55262263 Msa1063380:CDS
TTAACCATGGACAAGTGGCT+GGG 0.594772 7_2:+55264703 None:intergenic
CAATGCAGAAAGAAGAATCC+CGG 0.595689 7_2:-55265514 Msa1063380:CDS
TGTGTTCCTTGGTGGTGGAA+AGG 0.595907 7_2:-55265781 Msa1063380:CDS
CTAATGATGATGTAAAGCCA+AGG 0.597325 7_2:-55261292 Msa1063380:CDS
TGAAAATGCGGCATCAGCAG+CGG 0.598708 7_2:+55261923 None:intergenic
GGAAGACTTAAGGTGATTGG+CGG 0.599982 7_2:-55268502 Msa1063380:CDS
AAAGTGATGTAAATAGTCCA+AGG 0.600594 7_2:-55263476 Msa1063380:CDS
AGAACGTTGTCGTGAAGACA+AGG 0.607591 7_2:+55261951 None:intergenic
TTTCACAATATAAATGCAGG+AGG 0.608241 7_2:-55259693 Msa1063380:three_prime_UTR
TGTGATAAAGTTTGATGCCG+AGG 0.610244 7_2:-55267747 Msa1063380:CDS
ATGGATATCCCCAGAGTGTG+TGG 0.616612 7_2:+55262883 None:intergenic
AGTTATGTCGGTGATGAGCA+TGG 0.618124 7_2:-55267779 Msa1063380:CDS
TCCTCATGAGAGTTTCCTGA+AGG 0.619317 7_2:+55263441 None:intergenic
TTGTTAAGACCATGGAAAGG+AGG 0.620536 7_2:-55259951 Msa1063380:CDS
CCATGGAAAGGAGGAAATGG+TGG 0.620933 7_2:-55259942 Msa1063380:CDS
GTCAGATTCACTTCCAACAG+TGG 0.622879 7_2:-55261655 Msa1063380:CDS
CTGAAAACTAGCTCAACACC+TGG 0.628293 7_2:-55264766 Msa1063380:CDS
GGAAGTGAATCTGACAAAGA+GGG 0.629100 7_2:+55261663 None:intergenic
TCAGAGAATAAGCCAGCGCA+CGG 0.629437 7_2:-55260022 Msa1063380:intron
ATTGATGATGATGTTGGCGT+AGG 0.632414 7_2:+55269389 None:intergenic
TTCATCGAAAACTCTAGCTG+AGG 0.632853 7_2:-55264891 Msa1063380:intron
AAACTCCTGCGCAGATACAG+AGG 0.632998 7_2:+55264985 None:intergenic
TAATGATGATGTAAAGCCAA+GGG 0.634140 7_2:-55261291 Msa1063380:CDS
ACTTCCAACAGTGGTAGTAG+TGG 0.637558 7_2:-55261646 Msa1063380:CDS
ATTGCCCACAGCCAGAAGCA+AGG 0.639276 7_2:+55264271 None:intergenic
AACTGTGGTAAATTCATCAG+AGG 0.643998 7_2:-55262927 Msa1063380:CDS
TCCCGGTCATTGTCTTACAA+TGG 0.645986 7_2:-55265497 Msa1063380:CDS
TTGTCAGCTAAATTTCTAAG+GGG 0.648364 7_2:-55267695 Msa1063380:intron
TGATTATGGACAGATTGTGC+TGG 0.650059 7_2:-55262221 Msa1063380:intron
GCAAGAAAGCAGCTCAACTG+TGG 0.652840 7_2:-55262942 Msa1063380:CDS
GGAGATCCTTTCCACCACCA+AGG 0.654335 7_2:+55265775 None:intergenic
ATTGTCAAAGGGTTGAAAGG+AGG 0.661007 7_2:-55261759 Msa1063380:CDS
ATTGCGGGAAAGTCATGGTG+CGG 0.662014 7_2:-55266898 Msa1063380:intron
GCAGTCCATGACGCTCCACA+AGG 0.663227 7_2:-55263831 Msa1063380:intron
ATTTGAAGAGAATGAAAATG+CGG 0.663872 7_2:+55261911 None:intergenic
GAGGAAATCTTGATAATTCG+GGG 0.667669 7_2:+55259809 None:intergenic
ACCTTCAGGAAACTCTCATG+AGG 0.668647 7_2:-55263442 Msa1063380:CDS
CAAGAAACAAGCTTATGGAG+AGG 0.669710 7_2:-55261108 Msa1063380:CDS
TTCAGAAACCACACACTCTG+GGG 0.670158 7_2:-55262891 Msa1063380:CDS
AAACGAGCTTGTTAAGACCA+TGG 0.673577 7_2:-55259959 Msa1063380:CDS
TGGTGGTGACGAAATTGGAT+CGG 0.673771 7_2:-55265424 Msa1063380:CDS
ACCATTGTAAGACAATGACC+GGG 0.689366 7_2:+55265496 None:intergenic
TTTCCCGCAATAAAGGCAGG+AGG 0.704597 7_2:+55266910 None:intergenic
TAACTCTTGAATGGTCATCG+GGG 0.709545 7_2:-55265204 Msa1063380:CDS
AGCTTGTTAAGACCATGGAA+AGG 0.710363 7_2:-55259954 Msa1063380:CDS
AGGGAGAAATTGTTTCAAGG+CGG 0.715664 7_2:-55261317 Msa1063380:CDS
TTGCAGTTCCTACAAAACCA+GGG 0.724437 7_2:-55268259 Msa1063380:intron
ACTGTGCCAGCGATTCTAGG+CGG 0.756920 7_2:-55261783 Msa1063380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAAATTATTTTAAAAAA+CGG - chr7_2:55266743-55266762 Msa1063380:intron 0.0%
!!! TATTAAAGTTGTTATTTTTT+TGG - chr7_2:55260207-55260226 Msa1063380:intron 10.0%
!! TAGAGAAAAAATTAAATTAA+AGG - chr7_2:55263211-55263230 Msa1063380:intron 10.0%
!! AATTTATCAATTATACATAA+TGG + chr7_2:55266826-55266845 None:intergenic 10.0%
!! ATTATGTATAATTGATAAAT+TGG - chr7_2:55266825-55266844 Msa1063380:intron 10.0%
!! TATATTATGTTATATATTTG+TGG - chr7_2:55269329-55269348 Msa1063380:intron 10.0%
!!! GTGTTTTAAGAATAATAATA+TGG + chr7_2:55259768-55259787 None:intergenic 15.0%
!! TTATTATAATTATCTGTGAT+GGG - chr7_2:55260324-55260343 Msa1063380:intron 15.0%
!!! AAATGAGTTTTTTTTTTTGT+TGG - chr7_2:55260373-55260392 Msa1063380:intron 15.0%
!!! TAATTTCTTGTTTTATGTTT+TGG - chr7_2:55261510-55261529 Msa1063380:intron 15.0%
!! AATCATAATTCAAAATTCAA+GGG + chr7_2:55261982-55262001 None:intergenic 15.0%
!! AAATCATAATTCAAAATTCA+AGG + chr7_2:55261983-55262002 None:intergenic 15.0%
!! AAAAAAAATTCTACAAATGA+AGG - chr7_2:55262381-55262400 Msa1063380:intron 15.0%
!!! AAATTTGATTTCTCTAATTA+GGG + chr7_2:55262482-55262501 None:intergenic 15.0%
!! CATTATTAATCACAATTAAT+AGG + chr7_2:55263171-55263190 None:intergenic 15.0%
!! TAAATATTCATATTAAGTGA+AGG - chr7_2:55263860-55263879 Msa1063380:intron 15.0%
!! ATTATTCTATATTTAATCCT+TGG - chr7_2:55264992-55265011 Msa1063380:CDS 15.0%
!! ATATATGATATATTCTTACA+GGG - chr7_2:55266454-55266473 Msa1063380:intron 15.0%
!! ACAACAATTACTAAATTTAT+TGG - chr7_2:55266794-55266813 Msa1063380:intron 15.0%
!!! CTTATTAAACTGTTTTTTAA+TGG + chr7_2:55267357-55267376 None:intergenic 15.0%
!!! TTGATTAATTTTTTTGTCAT+TGG + chr7_2:55269456-55269475 None:intergenic 15.0%
!! CATTTATATTGTGAAAAAAT+TGG + chr7_2:55269485-55269504 None:intergenic 15.0%
!! CAATTGTTAGTTAGTTAAAA+TGG - chr7_2:55260264-55260283 Msa1063380:intron 20.0%
!!! TAAAATGGACTCAAAAATTT+AGG - chr7_2:55260279-55260298 Msa1063380:intron 20.0%
!!! AAAATGGACTCAAAAATTTA+GGG - chr7_2:55260280-55260299 Msa1063380:intron 20.0%
!! GGAAAAAAAAATGTTATCTT+GGG - chr7_2:55260301-55260320 Msa1063380:intron 20.0%
!! GTTATTATAATTATCTGTGA+TGG - chr7_2:55260323-55260342 Msa1063380:intron 20.0%
!!! CTCATTTTTCAGAAATTAAA+AGG + chr7_2:55260360-55260379 None:intergenic 20.0%
!! ATTCTTTCAACAATTTATGA+TGG + chr7_2:55261017-55261036 None:intergenic 20.0%
!! TCATAAATTGTTGAAAGAAT+TGG - chr7_2:55261017-55261036 Msa1063380:intron 20.0%
!! AGAATTGGTACATATATAAT+TGG - chr7_2:55261032-55261051 Msa1063380:intron 20.0%
!! ACTATAATATTCAGTTATGT+CGG - chr7_2:55261391-55261410 Msa1063380:intron 20.0%
!! ATCACTTGAAATAATAAAGA+TGG + chr7_2:55262119-55262138 None:intergenic 20.0%
!! AATGGAACAAAAAAAAAACT+AGG + chr7_2:55262317-55262336 None:intergenic 20.0%
!!! TAGTTTTTTTTTTGTTCCAT+TGG - chr7_2:55262316-55262335 Msa1063380:CDS 20.0%
!!! GAAATTTGATTTCTCTAATT+AGG + chr7_2:55262483-55262502 None:intergenic 20.0%
!!! TATTTTTTGTTGATGAAATC+TGG - chr7_2:55262689-55262708 Msa1063380:CDS 20.0%
!! AAGCAAAGATTTCAAATATT+CGG + chr7_2:55262956-55262975 None:intergenic 20.0%
!!! ATATTTTACTACTATTGTCT+TGG - chr7_2:55263107-55263126 Msa1063380:intron 20.0%
!! AGGAGAAAAAAATAAAATCA+TGG - chr7_2:55263231-55263250 Msa1063380:intron 20.0%
!!! TGATGAATATACTTTTTTGT+AGG + chr7_2:55263284-55263303 None:intergenic 20.0%
!!! CATTTTGAATTGATAAAGTT+CGG - chr7_2:55263827-55263846 Msa1063380:CDS 20.0%
!! TCTTATCATTGTTCATATTA+TGG - chr7_2:55264354-55264373 Msa1063380:intron 20.0%
!!! AATTGAAAGAGTTTATTTTG+TGG - chr7_2:55264511-55264530 Msa1063380:intron 20.0%
!!! ATTGAAAGAGTTTATTTTGT+GGG - chr7_2:55264512-55264531 Msa1063380:intron 20.0%
!!! ATTTTGAAACAACAATATTG+TGG + chr7_2:55264623-55264642 None:intergenic 20.0%
!! ATAAAAAATCTTTACACTGA+AGG + chr7_2:55264667-55264686 None:intergenic 20.0%
!!! TTAATTGGTTACTTTATCTA+AGG - chr7_2:55264960-55264979 Msa1063380:CDS 20.0%
!!! TATTTTATGCACAAATATCA+TGG + chr7_2:55265289-55265308 None:intergenic 20.0%
!! AGTTTAACAATATAAGTCAA+GGG + chr7_2:55265326-55265345 None:intergenic 20.0%
!! AAGTTTAACAATATAAGTCA+AGG + chr7_2:55265327-55265346 None:intergenic 20.0%
!! AATTTCTCAATTGATTAATG+TGG - chr7_2:55265555-55265574 Msa1063380:CDS 20.0%
!! AGATACTATTTATCTTATCT+AGG - chr7_2:55265763-55265782 Msa1063380:CDS 20.0%
!! GATACTATTTATCTTATCTA+GGG - chr7_2:55265764-55265783 Msa1063380:CDS 20.0%
!!! ACAATGTGAATACAAATTTT+AGG + chr7_2:55266421-55266440 None:intergenic 20.0%
!! CATATATGATATATTCTTAC+AGG - chr7_2:55266453-55266472 Msa1063380:intron 20.0%
!! ATAATTGATAAATTGGCAAA+TGG - chr7_2:55266832-55266851 Msa1063380:intron 20.0%
!!! ATTAAACTGTTTTTTAATGG+CGG + chr7_2:55267354-55267373 None:intergenic 20.0%
!! AATAATTCTTCACTTTGTAA+TGG - chr7_2:55267650-55267669 Msa1063380:intron 20.0%
!! AAACTATTACTAATCTTTGT+AGG + chr7_2:55267811-55267830 None:intergenic 20.0%
!! TTCATAAAAGCTAAGAAAAT+TGG + chr7_2:55268153-55268172 None:intergenic 20.0%
!! ACAATGTAATGAATTAAGAT+AGG - chr7_2:55268256-55268275 Msa1063380:CDS 20.0%
!!! TTATCTTTAGTTTCTTAGAT+AGG - chr7_2:55268455-55268474 Msa1063380:CDS 20.0%
!!! TTATCTTTAGTTTCTTAGAT+AGG + chr7_2:55268455-55268474 None:intergenic 20.0%
!! AAATAAGCTCAAGTTATATT+AGG + chr7_2:55268749-55268768 None:intergenic 20.0%
!! TGTATGTAATGAATTAAGAT+AGG + chr7_2:55268784-55268803 None:intergenic 20.0%
!!! TTTTTTCACAATATAAATGC+AGG - chr7_2:55269486-55269505 Msa1063380:five_prime_UTR 20.0%
! AAAAATCATCTCTTTCTTTC+TGG - chr7_2:55259879-55259898 Msa1063380:three_prime_UTR 25.0%
! AAAATCATCTCTTTCTTTCT+GGG - chr7_2:55259880-55259899 Msa1063380:three_prime_UTR 25.0%
! TAGTTTACAATCAACTGAAT+TGG - chr7_2:55259976-55259995 Msa1063380:CDS 25.0%
! AATAACAGAATCAATAGAGA+AGG + chr7_2:55260107-55260126 None:intergenic 25.0%
! GGGAAAAAAAAATGTTATCT+TGG - chr7_2:55260300-55260319 Msa1063380:intron 25.0%
!!! AAGTAGGTTTTTTTAGTTGT+TGG - chr7_2:55260402-55260421 Msa1063380:intron 25.0%
!!! AGTAGGTTTTTTTAGTTGTT+GGG - chr7_2:55260403-55260422 Msa1063380:intron 25.0%
! GTTCCTGATTTAATGTTATA+AGG - chr7_2:55260431-55260450 Msa1063380:intron 25.0%
! ATTAGAACAATCAGACATTA+TGG + chr7_2:55260545-55260564 None:intergenic 25.0%
! ACATCTAACTCTATATCAAT+CGG + chr7_2:55260785-55260804 None:intergenic 25.0%
!! TGAATGTGATATTGATGTTT+TGG - chr7_2:55260887-55260906 Msa1063380:intron 25.0%
!! CTTAAATGATAATGATATCC+AGG - chr7_2:55260961-55260980 Msa1063380:intron 25.0%
!! TTCAACAATTTATGATGGAA+GGG + chr7_2:55261012-55261031 None:intergenic 25.0%
!! TTTCAACAATTTATGATGGA+AGG + chr7_2:55261013-55261032 None:intergenic 25.0%
! AAGAAAAAGGACTAATTGAA+TGG + chr7_2:55261169-55261188 None:intergenic 25.0%
!! TTCAATTAGTCCTTTTTCTT+TGG - chr7_2:55261169-55261188 Msa1063380:intron 25.0%
!! CCTTATTTGTTCTTTACAAT+GGG - chr7_2:55261218-55261237 Msa1063380:intron 25.0%
! AAATAACTAGTAGCAATAAG+AGG + chr7_2:55261331-55261350 None:intergenic 25.0%
! TGCTACTAGTTATTTGAAAA+TGG - chr7_2:55261336-55261355 Msa1063380:CDS 25.0%
! ATTTGTCAGCTAAATTTCTA+AGG - chr7_2:55261485-55261504 Msa1063380:intron 25.0%
! TTTGTCAGCTAAATTTCTAA+GGG - chr7_2:55261486-55261505 Msa1063380:intron 25.0%
! TTTCGTTGTATAACAATACT+CGG + chr7_2:55261651-55261670 None:intergenic 25.0%
! GAATGATATAAGATGACATT+TGG + chr7_2:55261762-55261781 None:intergenic 25.0%
! TATCAAAAGGATCAAAACAA+TGG + chr7_2:55261837-55261856 None:intergenic 25.0%
!!! GAAATCTGATTTTAGGAAAT+TGG + chr7_2:55262052-55262071 None:intergenic 25.0%
!! ATATCTGGAAATCTGATTTT+AGG + chr7_2:55262059-55262078 None:intergenic 25.0%
! GTTAAACTGAAAGTTATATC+TGG + chr7_2:55262074-55262093 None:intergenic 25.0%
! ATCTGTAGTACATTATTTGA+AGG - chr7_2:55262238-55262257 Msa1063380:CDS 25.0%
! TCTGTAGTACATTATTTGAA+GGG - chr7_2:55262239-55262258 Msa1063380:CDS 25.0%
! AATTCTACAAATGAAGGAAA+AGG - chr7_2:55262387-55262406 Msa1063380:intron 25.0%
!! TTTTCGTTGTTATCTCTTTT+GGG + chr7_2:55262509-55262528 None:intergenic 25.0%
!! ATTTTCGTTGTTATCTCTTT+TGG + chr7_2:55262510-55262529 None:intergenic 25.0%
!! ATCTGAACTTTTCAAAGATT+AGG - chr7_2:55262528-55262547 Msa1063380:intron 25.0%
! ACTTATGATTTATATTCCGT+AGG - chr7_2:55263049-55263068 Msa1063380:intron 25.0%
! CTTATGATTTATATTCCGTA+GGG - chr7_2:55263050-55263069 Msa1063380:intron 25.0%
!!! TTTTGTTCTAAAATATCAGC+CGG + chr7_2:55263480-55263499 None:intergenic 25.0%
!!! TGATATTTTAGAACAAAACC+TGG - chr7_2:55263482-55263501 Msa1063380:CDS 25.0%
!!! GATATTTTAGAACAAAACCT+GGG - chr7_2:55263483-55263502 Msa1063380:CDS 25.0%
!!! AACAACATTTTTAGATGAAG+TGG + chr7_2:55263634-55263653 None:intergenic 25.0%
! CTTCATCTAAAAATGTTGTT+AGG - chr7_2:55263634-55263653 Msa1063380:intron 25.0%
! ATGGAATCATTAAAATGCAT+TGG - chr7_2:55264001-55264020 Msa1063380:intron 25.0%
!!! GTTAAAGATGGATTATTCAT+AGG + chr7_2:55264235-55264254 None:intergenic 25.0%
! TAGCAAATATAAGACAAGAT+TGG + chr7_2:55264578-55264597 None:intergenic 25.0%
!! TCTTATATTTGCTACATAGA+AGG - chr7_2:55264584-55264603 Msa1063380:intron 25.0%
! TGTCAGAAATCTTTCTTAAT+TGG - chr7_2:55264945-55264964 Msa1063380:CDS 25.0%
! TAAAAATCCAATAGCAAGTT+TGG + chr7_2:55265454-55265473 None:intergenic 25.0%
!! GTTGATTCCTTTAAATGTAA+TGG + chr7_2:55265843-55265862 None:intergenic 25.0%
! GCAATTTCAATGTATGTTAT+AGG - chr7_2:55265864-55265883 Msa1063380:intron 25.0%
! ATTTCATCAAGAACACAATA+TGG - chr7_2:55265896-55265915 Msa1063380:intron 25.0%
! AAAATCTCTTAGAATCTATG+AGG + chr7_2:55266119-55266138 None:intergenic 25.0%
!! AACATTCAAAATCTTGCTAT+TGG - chr7_2:55266503-55266522 Msa1063380:intron 25.0%
!! AAGAAAGATGACAAATTTTG+TGG - chr7_2:55266538-55266557 Msa1063380:intron 25.0%
!! AGAAAGATGACAAATTTTGT+GGG - chr7_2:55266539-55266558 Msa1063380:intron 25.0%
! GTATGCTTGATAAGAAAATA+CGG - chr7_2:55266634-55266653 Msa1063380:intron 25.0%
! GGAAATTATCAACATAAGAT+AGG + chr7_2:55267040-55267059 None:intergenic 25.0%
!!! ATCTTATGTTGATAATTTCC+AGG - chr7_2:55267040-55267059 Msa1063380:intron 25.0%
! GTTAAGATGGATAAAAGAAA+AGG - chr7_2:55267164-55267183 Msa1063380:intron 25.0%
!!! GGACATTTCTATTTTATTTC+AGG - chr7_2:55267193-55267212 Msa1063380:intron 25.0%
! ATTTGAAGAGAATGAAAATG+CGG + chr7_2:55267274-55267293 None:intergenic 25.0%
! TTCAAATCAGAAGAAAAAAC+AGG - chr7_2:55267287-55267306 Msa1063380:intron 25.0%
!!! TTCTGTTTGTTTTTAACATC+AGG + chr7_2:55267754-55267773 None:intergenic 25.0%
! GATGTTAAAAACAAACAGAA+AGG - chr7_2:55267754-55267773 Msa1063380:CDS 25.0%
! AAAAGTGAAAACAGAAAGAA+TGG + chr7_2:55267976-55267995 None:intergenic 25.0%
! ATAAACTATTGTCTGATTTC+AGG - chr7_2:55268027-55268046 Msa1063380:intron 25.0%
! TGAGCTTATTCTATTCTATT+GGG + chr7_2:55268282-55268301 None:intergenic 25.0%
! TTGAGCTTATTCTATTCTAT+TGG + chr7_2:55268283-55268302 None:intergenic 25.0%
! GAATAAGCTCAAGTTATATT+AGG - chr7_2:55268291-55268310 Msa1063380:intron 25.0%
! AATGCCAATGCTATAAATAT+TGG - chr7_2:55268383-55268402 Msa1063380:intron 25.0%
! CATTCCAATATTTATAGCAT+TGG + chr7_2:55268390-55268409 None:intergenic 25.0%
! AATGTCAGTGCTATAAATAT+TGG + chr7_2:55268657-55268676 None:intergenic 25.0%
!!! TTGAGCTTATTTTATTCTAC+TGG - chr7_2:55268757-55268776 Msa1063380:intron 25.0%
!!! TGAGCTTATTTTATTCTACT+GGG - chr7_2:55268758-55268777 Msa1063380:intron 25.0%
!!! AACTATTTCTACAATCAAAG+AGG - chr7_2:55268823-55268842 Msa1063380:intron 25.0%
!!! ACTATTTCTACAATCAAAGA+GGG - chr7_2:55268824-55268843 Msa1063380:intron 25.0%
! TAGAGAAGCTTATAGAAATA+AGG - chr7_2:55268897-55268916 Msa1063380:intron 25.0%
! TTGAAAGAGCTTATCAAAAT+AGG + chr7_2:55268942-55268961 None:intergenic 25.0%
! ACTTATTGGAACTTATCTTA+TGG + chr7_2:55268986-55269005 None:intergenic 25.0%
!! TTTAGAACCATTTAGAATCA+TGG + chr7_2:55269115-55269134 None:intergenic 25.0%
! AAAAGACAATGCTACAAAAA+GGG + chr7_2:55269398-55269417 None:intergenic 25.0%
!!! ATGGTTTTGCTTTGTTTTGT+TGG + chr7_2:55259749-55259768 None:intergenic 30.0%
!! TGATGAATTGATGATGATGT+TGG + chr7_2:55259802-55259821 None:intergenic 30.0%
! TAACAATCTTTTCGCAAACA+TGG + chr7_2:55259827-55259846 None:intergenic 30.0%
! TGATTTTTCTTACGTTGTGA+TGG + chr7_2:55259867-55259886 None:intergenic 30.0%
!! ATTCAACGACTTTTAGCTAT+TGG - chr7_2:55260061-55260080 Msa1063380:intron 30.0%
CTAACAATTGTTTCATGCAA+TGG + chr7_2:55260254-55260273 None:intergenic 30.0%
!! TTTTTGTTGGTGAGTAAAGT+AGG - chr7_2:55260386-55260405 Msa1063380:intron 30.0%
!!! GTAGGTTTTTTTAGTTGTTG+GGG - chr7_2:55260404-55260423 Msa1063380:intron 30.0%
CATAATCATTGTCCGTTATT+AGG - chr7_2:55260486-55260505 Msa1063380:intron 30.0%
AATGTCTGATTGTTCTAATC+TGG - chr7_2:55260546-55260565 Msa1063380:intron 30.0%
TATTGTGAGATATATGTAGC+TGG - chr7_2:55260590-55260609 Msa1063380:intron 30.0%
ACAACTTCCTTACAAATACT+TGG - chr7_2:55260736-55260755 Msa1063380:intron 30.0%
GATATAGAGTTAGATGTTCT+TGG - chr7_2:55260788-55260807 Msa1063380:intron 30.0%
! TCAACAATTTATGATGGAAG+GGG + chr7_2:55261011-55261030 None:intergenic 30.0%
!! GCCTTATTTGTTCTTTACAA+TGG - chr7_2:55261217-55261236 Msa1063380:intron 30.0%
CCCATTGTAAAGAACAAATA+AGG + chr7_2:55261221-55261240 None:intergenic 30.0%
CAAACTTTATCACAGAAAAC+AGG + chr7_2:55261429-55261448 None:intergenic 30.0%
TTGTCAGCTAAATTTCTAAG+GGG - chr7_2:55261487-55261506 Msa1063380:intron 30.0%
TTGCAGATCATGGTAAATAT+TGG + chr7_2:55261674-55261693 None:intergenic 30.0%
TATAAGATGACATTTGGACA+TGG + chr7_2:55261756-55261775 None:intergenic 30.0%
AAAGAATTCCAACAATTGGT+TGG + chr7_2:55261889-55261908 None:intergenic 30.0%
TGTGAAAGAATTCCAACAAT+TGG + chr7_2:55261893-55261912 None:intergenic 30.0%
TTTCACAACCTTATTCTTCT+GGG - chr7_2:55261906-55261925 Msa1063380:CDS 30.0%
AGGAAATTGGATTCTTCTAT+TGG + chr7_2:55262039-55262058 None:intergenic 30.0%
CTGTAGTACATTATTTGAAG+GGG - chr7_2:55262240-55262259 Msa1063380:CDS 30.0%
!!! AGTTCCTCTTTTTCAATTTG+GGG + chr7_2:55262571-55262590 None:intergenic 30.0%
!!! GAGTTCCTCTTTTTCAATTT+GGG + chr7_2:55262572-55262591 None:intergenic 30.0%
CAAATTGAAAAAGAGGAACT+CGG - chr7_2:55262571-55262590 Msa1063380:intron 30.0%
CAAAGATTTCAAATATTCGG+TGG + chr7_2:55262953-55262972 None:intergenic 30.0%
TAAAATCATGGAGAATCGAT+CGG - chr7_2:55263243-55263262 Msa1063380:intron 30.0%
!!! TACTTTTTTGTAGGAGAATC+AGG + chr7_2:55263275-55263294 None:intergenic 30.0%
TCTCATCTTCATCTTTCAAT+TGG + chr7_2:55263431-55263450 None:intergenic 30.0%
AAGAAATAAGTGCTCTTTGT+TGG - chr7_2:55263511-55263530 Msa1063380:CDS 30.0%
AGAAATAAGTGCTCTTTGTT+GGG - chr7_2:55263512-55263531 Msa1063380:CDS 30.0%
!! TTTTAGATGAAGTGGTTTGT+TGG + chr7_2:55263626-55263645 None:intergenic 30.0%
ATTATGAGATTTGTGACTAC+TGG + chr7_2:55263712-55263731 None:intergenic 30.0%
AAATCTCATAATGATTGCAC+TGG - chr7_2:55263720-55263739 Msa1063380:intron 30.0%
!! AATCAACGAATTGTTTCTAC+TGG - chr7_2:55263888-55263907 Msa1063380:intron 30.0%
TCAAGAGTTAAAACCTGTAA+AGG + chr7_2:55263968-55263987 None:intergenic 30.0%
!!! TACAGGTTTTAACTCTTGAA+TGG - chr7_2:55263969-55263988 Msa1063380:intron 30.0%
TTTAACTCTTGAATGGTCAT+CGG - chr7_2:55263976-55263995 Msa1063380:intron 30.0%
! TTGATTTTACTGCCAAGTAT+AGG - chr7_2:55264061-55264080 Msa1063380:intron 30.0%
CATAATAGTGTATTTGTCCA+GGG + chr7_2:55264132-55264151 None:intergenic 30.0%
TCATAATAGTGTATTTGTCC+AGG + chr7_2:55264133-55264152 None:intergenic 30.0%
TTATTCATAGGTATTAGCAC+TGG + chr7_2:55264223-55264242 None:intergenic 30.0%
! AGTTTTGCTACAGTTAAAGA+TGG + chr7_2:55264247-55264266 None:intergenic 30.0%
TTCGATGAATTTAACTGACT+TGG + chr7_2:55264280-55264299 None:intergenic 30.0%
CAACTTATTTCGTTTACCTT+AGG - chr7_2:55264382-55264401 Msa1063380:intron 30.0%
!! TATTTTGTGGGCTATTCTAA+TGG - chr7_2:55264524-55264543 Msa1063380:intron 30.0%
!!! TTTTTGTTTCTGTGACAAAC+TGG + chr7_2:55265080-55265099 None:intergenic 30.0%
GTCACAGAAACAAAAAATGA+AGG - chr7_2:55265084-55265103 Msa1063380:CDS 30.0%
! AAAAATCTAGCCTTCTACAA+TGG + chr7_2:55265125-55265144 None:intergenic 30.0%
AAAAGGAACAAGAATGAAGA+AGG + chr7_2:55265236-55265255 None:intergenic 30.0%
GAAAAAACAGCACTAAAATG+AGG + chr7_2:55265384-55265403 None:intergenic 30.0%
!!! CTTGCTATTGGATTTTTAAG+TGG - chr7_2:55265456-55265475 Msa1063380:CDS 30.0%
ATCAACTTTGCTAACAAGAA+AGG + chr7_2:55265518-55265537 None:intergenic 30.0%
!! TCTGTTTTGTTCTTGATTGA+CGG - chr7_2:55265624-55265643 Msa1063380:CDS 30.0%
AAAGTGATGTAAATAGTCCA+AGG - chr7_2:55265706-55265725 Msa1063380:CDS 30.0%
CTATTTATCTTATCTAGGGA+TGG - chr7_2:55265768-55265787 Msa1063380:CDS 30.0%
TGGAAAAATTAGTGTAGTTG+AGG - chr7_2:55265788-55265807 Msa1063380:CDS 30.0%
GGAAAAATTAGTGTAGTTGA+GGG - chr7_2:55265789-55265808 Msa1063380:CDS 30.0%
ATTCCTTTAAATGTAATGGC+CGG + chr7_2:55265839-55265858 None:intergenic 30.0%
AAAATTTCCAATGATATGCC+AGG + chr7_2:55265938-55265957 None:intergenic 30.0%
CTGGAATTCATTTGAGAAAA+TGG + chr7_2:55266050-55266069 None:intergenic 30.0%
! ACAAATTTTAGGCGATAAAC+TGG + chr7_2:55266410-55266429 None:intergenic 30.0%
! AGACTGGAACATTTGAAATA+AGG - chr7_2:55266578-55266597 Msa1063380:intron 30.0%
!!! AAGCACTGGTTTTATTCTTT+TGG - chr7_2:55266604-55266623 Msa1063380:intron 30.0%
CATTGCTGTAGAAAAACAAA+GGG - chr7_2:55266682-55266701 Msa1063380:intron 30.0%
!!! GCTCTTTATTGTCGATTTTA+AGG - chr7_2:55266897-55266916 Msa1063380:intron 30.0%
!!! CTTTATTGTCGATTTTAAGG+TGG - chr7_2:55266900-55266919 Msa1063380:CDS 30.0%
GTGGAATTATAAAGTGAACA+TGG - chr7_2:55266919-55266938 Msa1063380:CDS 30.0%
! CCTCACAAATTTGAAAGTAT+TGG + chr7_2:55266998-55267017 None:intergenic 30.0%
CCAATACTTTCAAATTTGTG+AGG - chr7_2:55266995-55267014 Msa1063380:intron 30.0%
AAGATAGGCACATAAAGAAA+TGG + chr7_2:55267025-55267044 None:intergenic 30.0%
ATCTTTGCCATTCTTTAATG+AGG - chr7_2:55267120-55267139 Msa1063380:intron 30.0%
GTTATCTCCTCATTAAAGAA+TGG + chr7_2:55267130-55267149 None:intergenic 30.0%
!! TTTTTAATGGCGGAAACTTT+AGG + chr7_2:55267344-55267363 None:intergenic 30.0%
AAAATTCCAACCTCCAATTT+CGG - chr7_2:55267471-55267490 Msa1063380:intron 30.0%
! TCAAAATAGAGCATGCTTTT+AGG + chr7_2:55267679-55267698 None:intergenic 30.0%
AGATAAGTCACAAAGTGATA+GGG - chr7_2:55267846-55267865 Msa1063380:intron 30.0%
! TAATGATGATGTAAAGCCAA+GGG - chr7_2:55267891-55267910 Msa1063380:intron 30.0%
TCAAACAAGAAACAAGCTTA+TGG - chr7_2:55268069-55268088 Msa1063380:intron 30.0%
CATGATTGTCTTGAAGAATT+AGG + chr7_2:55268188-55268207 None:intergenic 30.0%
! AGAAAGTATATGATGCACTA+AGG - chr7_2:55268220-55268239 Msa1063380:intron 30.0%
TTATATTAGGTGATGAGTCA+TGG - chr7_2:55268304-55268323 Msa1063380:intron 30.0%
TAACCAATGACTCATCATAA+TGG + chr7_2:55268686-55268705 None:intergenic 30.0%
TAACCAATGACTCATCATAA+TGG - chr7_2:55268686-55268705 Msa1063380:intron 30.0%
ATGAGTCATGGTATTCTATA+AGG + chr7_2:55268724-55268743 None:intergenic 30.0%
TTATATTAGGTGATGAGTCA+TGG + chr7_2:55268304-55268323 None:intergenic 30.0%
TACAATCAAAGAGGGAATAA+GGG - chr7_2:55268832-55268851 Msa1063380:intron 30.0%
ATTGTCATGCATAGTACATA+AGG - chr7_2:55269057-55269076 Msa1063380:intron 30.0%
GAAAAGACAATGCTACAAAA+AGG + chr7_2:55269399-55269418 None:intergenic 30.0%
! GTAGCATTGTCTTTTCTTTT+TGG - chr7_2:55269403-55269422 Msa1063380:five_prime_UTR 30.0%
TTTCACAATATAAATGCAGG+AGG - chr7_2:55269489-55269508 Msa1063380:five_prime_UTR 30.0%
CCATAGTGAATCACAATTCT+TGG + chr7_2:55260004-55260023 None:intergenic 35.0%
CCAAGAATTGTGATTCACTA+TGG - chr7_2:55260001-55260020 Msa1063380:CDS 35.0%
GCGCCTTATAACATTAAATC+AGG + chr7_2:55260437-55260456 None:intergenic 35.0%
AAAAACCGTCTGCCTAATAA+CGG + chr7_2:55260501-55260520 None:intergenic 35.0%
! ATCTGGTGATGTTTGAAAGA+TGG - chr7_2:55260563-55260582 Msa1063380:intron 35.0%
TGGAAAATGCATGTCGTAAT+AGG - chr7_2:55260610-55260629 Msa1063380:intron 35.0%
GCTCATACTGCTTAGTTTAA+TGG - chr7_2:55260650-55260669 Msa1063380:intron 35.0%
ATACTGCTTAGTTTAATGGC+AGG - chr7_2:55260654-55260673 Msa1063380:intron 35.0%
TACTGCTTAGTTTAATGGCA+GGG - chr7_2:55260655-55260674 Msa1063380:intron 35.0%
ACTTCCTTACAAATACTTGG+AGG - chr7_2:55260739-55260758 Msa1063380:intron 35.0%
!!! CTAAATATCCCTGGTTTTGT+AGG + chr7_2:55260934-55260953 None:intergenic 35.0%
CAAAACCAGGGATATTTAGT+TGG - chr7_2:55260935-55260954 Msa1063380:intron 35.0%
GACAGAAAAGGAAATTTACC+TGG + chr7_2:55260982-55261001 None:intergenic 35.0%
TTGACTTCCTAGCTCATTAT+AGG - chr7_2:55261117-55261136 Msa1063380:CDS 35.0%
ATCACAACCTATAATGAGCT+AGG + chr7_2:55261127-55261146 None:intergenic 35.0%
! ATTAGTCCTTTTTCTTTGGC+AGG - chr7_2:55261173-55261192 Msa1063380:intron 35.0%
GACAGAAAAAGCGGTAATAT+TGG + chr7_2:55261247-55261266 None:intergenic 35.0%
CATAGCATGTGTATTGCATT+GGG + chr7_2:55261727-55261746 None:intergenic 35.0%
ACATAGCATGTGTATTGCAT+TGG + chr7_2:55261728-55261747 None:intergenic 35.0%
! ATCCTTTTGATAGAAACTGC+CGG - chr7_2:55261845-55261864 Msa1063380:intron 35.0%
CTTTCACAACCTTATTCTTC+TGG - chr7_2:55261905-55261924 Msa1063380:CDS 35.0%
TTCTTCTATTGGCATTGCTT+TGG + chr7_2:55262028-55262047 None:intergenic 35.0%
GCACAGTTTAAATCATCCAA+TGG + chr7_2:55262335-55262354 None:intergenic 35.0%
TGAATTTCAATAATGCCACG+TGG + chr7_2:55262357-55262376 None:intergenic 35.0%
! AGCCTTCTGATATTTGGAAT+GGG - chr7_2:55262433-55262452 Msa1063380:intron 35.0%
! TTTTCAATTTGGGGGTTCTT+TGG + chr7_2:55262562-55262581 None:intergenic 35.0%
!!! GTTCCTCTTTTTCAATTTGG+GGG + chr7_2:55262570-55262589 None:intergenic 35.0%
!!! CGAGTTCCTCTTTTTCAATT+TGG + chr7_2:55262573-55262592 None:intergenic 35.0%
! CTAGCATAATCTATTTGCTG+GGG + chr7_2:55262655-55262674 None:intergenic 35.0%
CCTAGCATAATCTATTTGCT+GGG + chr7_2:55262656-55262675 None:intergenic 35.0%
ACCTAGCATAATCTATTTGC+TGG + chr7_2:55262657-55262676 None:intergenic 35.0%
CAAATAGATTATGCTAGGTC+TGG - chr7_2:55262658-55262677 Msa1063380:CDS 35.0%
TGATTGTTTAATCGATCCGA+TGG - chr7_2:55262786-55262805 Msa1063380:intron 35.0%
TCACTTTATCGTGAGAAAGT+CGG + chr7_2:55262834-55262853 None:intergenic 35.0%
! CAGTCAGCTTTCAAAGATTT+TGG + chr7_2:55262906-55262925 None:intergenic 35.0%
AAGCCGTGTAAAGAAATCTT+GGG - chr7_2:55262977-55262996 Msa1063380:CDS 35.0%
AGTCCCAAGATTTCTTTACA+CGG + chr7_2:55262983-55263002 None:intergenic 35.0%
! CAGATTGTTGATTGCATTTC+AGG - chr7_2:55263338-55263357 Msa1063380:intron 35.0%
! TTGTTGATTGCATTTCAGGA+TGG - chr7_2:55263342-55263361 Msa1063380:intron 35.0%
GAAGCTAAAATTGTGTTCCT+TGG - chr7_2:55263390-55263409 Msa1063380:CDS 35.0%
TAAAATATCAGCCGGAAGAT+TGG + chr7_2:55263472-55263491 None:intergenic 35.0%
! CACTTATTTCTTTATCTCCC+AGG + chr7_2:55263503-55263522 None:intergenic 35.0%
! TAGATGGAGATATCCTGTTT+TGG - chr7_2:55263571-55263590 Msa1063380:CDS 35.0%
!!! TTTTCTTAGTTTGCGTGCAT+TGG - chr7_2:55263918-55263937 Msa1063380:intron 35.0%
GAGAGACACGTTAAAGTTTA+GGG + chr7_2:55263946-55263965 None:intergenic 35.0%
TTAACTCTTGAATGGTCATC+GGG - chr7_2:55263977-55263996 Msa1063380:intron 35.0%
CATTAATGTCTGAGCAGAAT+AGG - chr7_2:55264170-55264189 Msa1063380:intron 35.0%
TATGAACAATGATAAGAGCC+AGG + chr7_2:55264351-55264370 None:intergenic 35.0%
GTTCAGCTTCTTGTTCAAAT+TGG - chr7_2:55264438-55264457 Msa1063380:intron 35.0%
ATAAGACAAGATTGGATGTG+TGG + chr7_2:55264570-55264589 None:intergenic 35.0%
! TATTTGCTACATAGAAGGAG+AGG - chr7_2:55264589-55264608 Msa1063380:intron 35.0%
! AAATTTCCTGTGTGTTTTGC+AGG - chr7_2:55264825-55264844 Msa1063380:intron 35.0%
! CAAAAGTCCAATTTTGTCAC+TGG + chr7_2:55264883-55264902 None:intergenic 35.0%
ATCTTAAAGACTGCTCTGAT+GGG - chr7_2:55265046-55265065 Msa1063380:CDS 35.0%
TGATGACAGAATCGATAGTT+TGG + chr7_2:55265199-55265218 None:intergenic 35.0%
GCAAAAGATAATGCTTGTAC+TGG + chr7_2:55265420-55265439 None:intergenic 35.0%
! GCATTATCTTTTGCAAACTC+TGG - chr7_2:55265426-55265445 Msa1063380:CDS 35.0%
TGGATCAATTACTTCTTTCC+AGG - chr7_2:55265575-55265594 Msa1063380:CDS 35.0%
TCAATTACTTCTTTCCAGGT+TGG - chr7_2:55265579-55265598 Msa1063380:CDS 35.0%
AAGCTCACCAATTACTTCAT+TGG - chr7_2:55265659-55265678 Msa1063380:CDS 35.0%
! CACCAATTACTTCATTGGTT+TGG - chr7_2:55265664-55265683 Msa1063380:CDS 35.0%
CTCCAAACCAATGAAGTAAT+TGG + chr7_2:55265669-55265688 None:intergenic 35.0%
AACTGTGGTAAATTCATCAG+AGG - chr7_2:55266255-55266274 Msa1063380:intron 35.0%
! ATGAATTTTCACAGCAAAGC+AGG + chr7_2:55266339-55266358 None:intergenic 35.0%
TTTAGGCGATAAACTGGTAA+TGG + chr7_2:55266404-55266423 None:intergenic 35.0%
TAAGAAACCGATACGAAAAG+TGG - chr7_2:55266480-55266499 Msa1063380:intron 35.0%
!! GAATGTTCCACTTTTCGTAT+CGG + chr7_2:55266490-55266509 None:intergenic 35.0%
ATTCTATCATTGCTTCAGAC+TGG - chr7_2:55266562-55266581 Msa1063380:intron 35.0%
! TTGAAATAAGGTGAAAGCAC+TGG - chr7_2:55266590-55266609 Msa1063380:intron 35.0%
GCATTGCTGTAGAAAAACAA+AGG - chr7_2:55266681-55266700 Msa1063380:intron 35.0%
GTACAGATCTTTACCAGATT+TGG - chr7_2:55266859-55266878 Msa1063380:intron 35.0%
! ATCTTTACCAGATTTGGAAC+TGG - chr7_2:55266865-55266884 Msa1063380:intron 35.0%
CACAATCTGTCCATAATCAT+CGG + chr7_2:55266960-55266979 None:intergenic 35.0%
!! GTTGATAATTTCCAGGCTAA+TGG - chr7_2:55267047-55267066 Msa1063380:intron 35.0%
GCATTCATCTCATTATTAGC+TGG - chr7_2:55267080-55267099 Msa1063380:intron 35.0%
TAGCTGGAGAAAATGAATTC+AGG - chr7_2:55267096-55267115 Msa1063380:intron 35.0%
GAGATAACAGTGTAAACTAC+TGG - chr7_2:55267142-55267161 Msa1063380:intron 35.0%
! GTGTAAACTACTGGTTAAGA+TGG - chr7_2:55267151-55267170 Msa1063380:intron 35.0%
GGATAAAAGAAAAGGCTGAA+CGG - chr7_2:55267172-55267191 Msa1063380:intron 35.0%
ATGTTCCAAATGACCGAAAT+TGG + chr7_2:55267487-55267506 None:intergenic 35.0%
CAGATAAGTCACAAAGTGAT+AGG - chr7_2:55267845-55267864 Msa1063380:intron 35.0%
GATAGGGAGAAATTGTTTCA+AGG - chr7_2:55267862-55267881 Msa1063380:intron 35.0%
! CTAATGATGATGTAAAGCCA+AGG - chr7_2:55267890-55267909 Msa1063380:intron 35.0%
CAGAACACCTGAAGAAATTA+TGG - chr7_2:55267915-55267934 Msa1063380:intron 35.0%
TAAGCAGCCATAATTTCTTC+AGG + chr7_2:55267925-55267944 None:intergenic 35.0%
! AAGCTTGTTTCTTGTTTGAG+AGG + chr7_2:55268068-55268087 None:intergenic 35.0%
ATGAGTCATGGTATTCTAGA+AGG - chr7_2:55268316-55268335 Msa1063380:intron 35.0%
GATCCATTATGATGAGTCAT+TGG - chr7_2:55268348-55268367 Msa1063380:intron 35.0%
GATGTTCATCACCTATCAAT+TGG - chr7_2:55268505-55268524 Msa1063380:CDS 35.0%
!! CAATGAAAGCACCAATTGAT+AGG + chr7_2:55268519-55268538 None:intergenic 35.0%
GATCCATTATGATGAGTCAT+TGG + chr7_2:55268348-55268367 None:intergenic 35.0%
CATGGTATTCTATAAGGATC+TGG + chr7_2:55268718-55268737 None:intergenic 35.0%
CTACAATCAAAGAGGGAATA+AGG - chr7_2:55268831-55268850 Msa1063380:intron 35.0%
AAACAAACAATAGCCAAGAC+TGG + chr7_2:55269016-55269035 None:intergenic 35.0%
GTCGTTACCATGATTCTAAA+TGG - chr7_2:55269105-55269124 Msa1063380:intron 35.0%
! AATTTTCAGCTCCATTTTGC+AGG + chr7_2:55269190-55269209 None:intergenic 35.0%
! GAGGAAATCTTGATAATTCG+GGG + chr7_2:55269376-55269395 None:intergenic 35.0%
! GGAGGAAATCTTGATAATTC+GGG + chr7_2:55269377-55269396 None:intergenic 35.0%
! GGGAGGAAATCTTGATAATT+CGG + chr7_2:55269378-55269397 None:intergenic 35.0%
!! ATTGATGATGATGTTGGCGT+AGG + chr7_2:55259796-55259815 None:intergenic 40.0%
ATTGTCCGTTATTAGGCAGA+CGG - chr7_2:55260493-55260512 Msa1063380:intron 40.0%
! TGCATGTCGTAATAGGTTGA+TGG - chr7_2:55260617-55260636 Msa1063380:intron 40.0%
GATGGAAGACTTAAGGTGAT+TGG - chr7_2:55260677-55260696 Msa1063380:intron 40.0%
ATTGGCGGTGATAACATTGA+AGG - chr7_2:55260695-55260714 Msa1063380:intron 40.0%
CGTACCTCCAAGTATTTGTA+AGG + chr7_2:55260746-55260765 None:intergenic 40.0%
! TACAAATACTTGGAGGTACG+TGG - chr7_2:55260746-55260765 Msa1063380:intron 40.0%
TTGCAGTTCCTACAAAACCA+GGG - chr7_2:55260923-55260942 Msa1063380:intron 40.0%
AGACTCCAACTAAATATCCC+TGG + chr7_2:55260943-55260962 None:intergenic 40.0%
AAGGGGAAATGAGACAGAAA+AGG + chr7_2:55260994-55261013 None:intergenic 40.0%
! TCCTTTTTCTTTGGCAGGTT+TGG - chr7_2:55261178-55261197 Msa1063380:intron 40.0%
TCCAAACCTGCCAAAGAAAA+AGG + chr7_2:55261182-55261201 None:intergenic 40.0%
TGTGATAAAGTTTGATGCCG+AGG - chr7_2:55261435-55261454 Msa1063380:CDS 40.0%
ATAAAGTTTGATGCCGAGGA+AGG - chr7_2:55261439-55261458 Msa1063380:CDS 40.0%
CTTCAAAAGTTGTCCTTCCT+CGG + chr7_2:55261455-55261474 None:intergenic 40.0%
! ATCTCGTCAATCTTTTGCGT+TGG - chr7_2:55261584-55261603 Msa1063380:intron 40.0%
GTGTTGTCAATTGCAGATCA+TGG + chr7_2:55261684-55261703 None:intergenic 40.0%
ATGTGTATTGCATTGGGTCT+CGG + chr7_2:55261721-55261740 None:intergenic 40.0%
! TCCTTTTGATAGAAACTGCC+GGG - chr7_2:55261846-55261865 Msa1063380:intron 40.0%
! AACCTTATTCTTCTGGGAAC+AGG - chr7_2:55261912-55261931 Msa1063380:CDS 40.0%
! GTGTGTGTAATTTGTCTGCA+TGG - chr7_2:55262190-55262209 Msa1063380:intron 40.0%
ATGATTTAAACTGTGCCACG+TGG - chr7_2:55262339-55262358 Msa1063380:intron 40.0%
GCTCGAATCAGTATTACAGA+GGG + chr7_2:55262416-55262435 None:intergenic 40.0%
GATTCGAGCCTTCTGATATT+TGG - chr7_2:55262427-55262446 Msa1063380:intron 40.0%
GAGCCTTCTGATATTTGGAA+TGG - chr7_2:55262432-55262451 Msa1063380:intron 40.0%
! TGATATTTGGAATGGGCGAT+TGG - chr7_2:55262440-55262459 Msa1063380:intron 40.0%
!! CGTTGTTATCTCTTTTGGGT+GGG + chr7_2:55262505-55262524 None:intergenic 40.0%
! TCGTTGTTATCTCTTTTGGG+TGG + chr7_2:55262506-55262525 None:intergenic 40.0%
GAACCCCCAAATTGAAAAAG+AGG - chr7_2:55262564-55262583 Msa1063380:intron 40.0%
CCCAGCAAATAGATTATGCT+AGG - chr7_2:55262653-55262672 Msa1063380:CDS 40.0%
! TTTCCCTCTTTTTGGACCAT+CGG + chr7_2:55262805-55262824 None:intergenic 40.0%
ACTTTATCGTGAGAAAGTCG+GGG + chr7_2:55262832-55262851 None:intergenic 40.0%
CACTTTATCGTGAGAAAGTC+GGG + chr7_2:55262833-55262852 None:intergenic 40.0%
TGCTTCTCGTCAAATGGAAA+CGG + chr7_2:55262861-55262880 None:intergenic 40.0%
CATACATGCTTCTCGTCAAA+TGG + chr7_2:55262867-55262886 None:intergenic 40.0%
GAAGCCGTGTAAAGAAATCT+TGG - chr7_2:55262976-55262995 Msa1063380:CDS 40.0%
AGAACATACATGCTTCCCTA+CGG + chr7_2:55263068-55263087 None:intergenic 40.0%
GAAGCATGTATGTTCTGTCA+TGG - chr7_2:55262875-55262894 Msa1063380:CDS 40.0%
!! AGGATGGACTGCTAATTCTT+TGG - chr7_2:55263358-55263377 Msa1063380:intron 40.0%
!! GGATGGACTGCTAATTCTTT+GGG - chr7_2:55263359-55263378 Msa1063380:intron 40.0%
GCTAAAATTGTGTTCCTTGG+TGG - chr7_2:55263393-55263412 Msa1063380:CDS 40.0%
AAAATTGTGTTCCTTGGTGG+TGG - chr7_2:55263396-55263415 Msa1063380:CDS 40.0%
TGAAACAAACGCCAATCTTC+CGG - chr7_2:55263458-55263477 Msa1063380:CDS 40.0%
TAAGTATCCAACAGCGAGAA+TGG + chr7_2:55263553-55263572 None:intergenic 40.0%
CAATGCAGAAAGAAGAATCC+CGG - chr7_2:55263668-55263687 Msa1063380:intron 40.0%
ACCATTGTAAGACAATGACC+GGG + chr7_2:55263689-55263708 None:intergenic 40.0%
GACCATTGTAAGACAATGAC+CGG + chr7_2:55263690-55263709 None:intergenic 40.0%
ACTGGTCAGTTGTTTGTGTA+TGG - chr7_2:55263738-55263757 Msa1063380:CDS 40.0%
GGAGAGACACGTTAAAGTTT+AGG + chr7_2:55263947-55263966 None:intergenic 40.0%
TTAACGTGTCTCTCCTTTAC+AGG - chr7_2:55263952-55263971 Msa1063380:intron 40.0%
TAACTCTTGAATGGTCATCG+GGG - chr7_2:55263978-55263997 Msa1063380:intron 40.0%
!! CGAAAGTGCCATTAAGTGTA+AGG + chr7_2:55264036-55264055 None:intergenic 40.0%
!! CTTTTTGTACTGACAAACCC+TGG - chr7_2:55264112-55264131 Msa1063380:CDS 40.0%
TTCATCGAAAACTCTAGCTG+AGG - chr7_2:55264291-55264310 Msa1063380:CDS 40.0%
TCAGTACTTTCTGCTAAACC+TGG - chr7_2:55264330-55264349 Msa1063380:intron 40.0%
!!! TGAGCTAGTTTTCAGAACTG+CGG + chr7_2:55264411-55264430 None:intergenic 40.0%
TTTGAACAAGAAGCTGAACC+AGG + chr7_2:55264437-55264456 None:intergenic 40.0%
TGTTCAAATTGGCCCTTAAC+TGG - chr7_2:55264449-55264468 Msa1063380:intron 40.0%
GTTCAAATTGGCCCTTAACT+GGG - chr7_2:55264450-55264469 Msa1063380:intron 40.0%
TTCAAATTGGCCCTTAACTG+GGG - chr7_2:55264451-55264470 Msa1063380:intron 40.0%
AATTCCAGCACCTTTAACCA+TGG + chr7_2:55264495-55264514 None:intergenic 40.0%
CATTAACCTGCAAAACACAC+AGG + chr7_2:55264834-55264853 None:intergenic 40.0%
! CTGTGTGTTTTGCAGGTTAA+TGG - chr7_2:55264832-55264851 Msa1063380:intron 40.0%
GCAGGTTAATGGTGTAAAAG+TGG - chr7_2:55264843-55264862 Msa1063380:intron 40.0%
GTTAATGGTGTAAAAGTGGC+AGG - chr7_2:55264847-55264866 Msa1063380:intron 40.0%
CGAACCTACAAAAGTCATCA+CGG + chr7_2:55265018-55265037 None:intergenic 40.0%
GATCTTAAAGACTGCTCTGA+TGG - chr7_2:55265045-55265064 Msa1063380:CDS 40.0%
TCTTCTGTCACCATTGTAGA+AGG - chr7_2:55265112-55265131 Msa1063380:CDS 40.0%
CTTCACATATGGGGGAAAAA+AGG + chr7_2:55265253-55265272 None:intergenic 40.0%
! AAATGAGGTCCTTTTCCTTG+TGG + chr7_2:55265369-55265388 None:intergenic 40.0%
!! TCTGGAACCAAACTTGCTAT+TGG - chr7_2:55265444-55265463 Msa1063380:CDS 40.0%
!!! TGGATTTTTAAGTGGTCGTG+TGG - chr7_2:55265464-55265483 Msa1063380:CDS 40.0%
!!! GGATTTTTAAGTGGTCGTGT+GGG - chr7_2:55265465-55265484 Msa1063380:CDS 40.0%
TGAGGGTGATACTGGTAAAA+CGG - chr7_2:55265806-55265825 Msa1063380:CDS 40.0%
CTTTAAATGTAATGGCCGGT+TGG + chr7_2:55265835-55265854 None:intergenic 40.0%
CAACCGGCCATTACATTTAA+AGG - chr7_2:55265833-55265852 Msa1063380:CDS 40.0%
! GCACTGACACTACAGATTAA+AGG - chr7_2:55265968-55265987 Msa1063380:intron 40.0%
!! TGAGGCATTGACACAAACAT+TGG + chr7_2:55266101-55266120 None:intergenic 40.0%
AGATGATAGCATCACAACCT+CGG - chr7_2:55266147-55266166 Msa1063380:intron 40.0%
! CTTGTCATTTGATACTTCCG+AGG + chr7_2:55266167-55266186 None:intergenic 40.0%
GTTTCAGCAGTACTCTTCAA+GGG + chr7_2:55266202-55266221 None:intergenic 40.0%
AGTTTCAGCAGTACTCTTCA+AGG + chr7_2:55266203-55266222 None:intergenic 40.0%
!! GTCCACAAAAGCATTGATAC+AGG - chr7_2:55266369-55266388 Msa1063380:intron 40.0%
! GACCTGTATCAATGCTTTTG+TGG + chr7_2:55266374-55266393 None:intergenic 40.0%
! TTTACCAGATTTGGAACTGG+TGG - chr7_2:55266868-55266887 Msa1063380:intron 40.0%
ACCATGTGTTCCGATGATTA+TGG - chr7_2:55266947-55266966 Msa1063380:intron 40.0%
TCCATAATCATCGGAACACA+TGG + chr7_2:55266951-55266970 None:intergenic 40.0%
TGATTATGGACAGATTGTGC+TGG - chr7_2:55266961-55266980 Msa1063380:intron 40.0%
ATTCTAGGCGGTATTGTCAA+AGG - chr7_2:55267411-55267430 Msa1063380:intron 40.0%
TTCTAGGCGGTATTGTCAAA+GGG - chr7_2:55267412-55267431 Msa1063380:intron 40.0%
GGTATTGTCAAAGGGTTGAA+AGG - chr7_2:55267420-55267439 Msa1063380:intron 40.0%
ATTGTCAAAGGGTTGAAAGG+AGG - chr7_2:55267423-55267442 Msa1063380:intron 40.0%
! TTTTGTCAGTTCTGCATGAG+AGG + chr7_2:55267454-55267473 None:intergenic 40.0%
AAATGACCGAAATTGGAGGT+TGG + chr7_2:55267480-55267499 None:intergenic 40.0%
AACCTCCAATTTCGGTCATT+TGG - chr7_2:55267479-55267498 Msa1063380:intron 40.0%
TTCCAAATGACCGAAATTGG+AGG + chr7_2:55267484-55267503 None:intergenic 40.0%
GGAAGTGAATCTGACAAAGA+GGG + chr7_2:55267522-55267541 None:intergenic 40.0%
TGGAAGTGAATCTGACAAAG+AGG + chr7_2:55267523-55267542 None:intergenic 40.0%
! AAGCTCCACTTCCTTTTCAT+CGG + chr7_2:55267562-55267581 None:intergenic 40.0%
AAGGAAGTGGAGCTTGATAT+AGG - chr7_2:55267567-55267586 Msa1063380:intron 40.0%
GAAGTAGAAGCTGTAGTTTG+AGG + chr7_2:55267727-55267746 None:intergenic 40.0%
GTGACTTATCTGCAAGCAAA+AGG + chr7_2:55267837-55267856 None:intergenic 40.0%
AGGGAGAAATTGTTTCAAGG+CGG - chr7_2:55267865-55267884 Msa1063380:intron 40.0%
ATGGCTGCTTACAGAAAAAC+TGG - chr7_2:55267934-55267953 Msa1063380:CDS 40.0%
TGGCTGCTTACAGAAAAACT+GGG - chr7_2:55267935-55267954 Msa1063380:CDS 40.0%
! GTTTCTTGTTTGAGAGGCAA+CGG + chr7_2:55268062-55268081 None:intergenic 40.0%
CAAGAAACAAGCTTATGGAG+AGG - chr7_2:55268074-55268093 Msa1063380:intron 40.0%
TATGGAGAGGCAGGAAAAAT+TGG - chr7_2:55268087-55268106 Msa1063380:intron 40.0%
! CAATTGGTGCTTTCATTGAG+AGG - chr7_2:55268521-55268540 Msa1063380:intron 40.0%
AGACTGGTGGAAGAACTTAT+TGG + chr7_2:55269000-55269019 None:intergenic 40.0%
ATAAGTTCTTCCACCAGTCT+TGG - chr7_2:55269000-55269019 Msa1063380:intron 40.0%
!! AAACGAGCTTGTTAAGACCA+TGG - chr7_2:55269223-55269242 Msa1063380:CDS 40.0%
!! AGCTTGTTAAGACCATGGAA+AGG - chr7_2:55269228-55269247 Msa1063380:CDS 40.0%
TTGTTAAGACCATGGAAAGG+AGG - chr7_2:55269231-55269250 Msa1063380:intron 40.0%
AGACAATGCTACAAAAAGGG+AGG + chr7_2:55269395-55269414 None:intergenic 40.0%
GCGAGAACTGAAGAAGAAGA+TGG + chr7_2:55260031-55260050 None:intergenic 45.0%
! GGCAGACGGTTTTTAATGAC+AGG - chr7_2:55260507-55260526 Msa1063380:intron 45.0%
GCTTAGTTTAATGGCAGGGA+TGG - chr7_2:55260659-55260678 Msa1063380:intron 45.0%
GGAAGACTTAAGGTGATTGG+CGG - chr7_2:55260680-55260699 Msa1063380:intron 45.0%
CTTGCAGTTCCTACAAAACC+AGG - chr7_2:55260922-55260941 Msa1063380:intron 45.0%
!!! ACCGCTTTTTCTGTCATCAG+CGG - chr7_2:55261252-55261271 Msa1063380:CDS 45.0%
AGTTATGTCGGTGATGAGCA+TGG - chr7_2:55261403-55261422 Msa1063380:intron 45.0%
ACCCGGCAGTTTCTATCAAA+AGG + chr7_2:55261850-55261869 None:intergenic 45.0%
TGCCTGTTCCCAGAAGAATA+AGG + chr7_2:55261917-55261936 None:intergenic 45.0%
TGAAATTGCCGAGCCAACTT+CGG - chr7_2:55262157-55262176 Msa1063380:intron 45.0%
CCATGACTTTCCCGCAATAA+AGG + chr7_2:55262282-55262301 None:intergenic 45.0%
CCTTTATTGCGGGAAAGTCA+TGG - chr7_2:55262279-55262298 Msa1063380:CDS 45.0%
GGCTCGAATCAGTATTACAG+AGG + chr7_2:55262417-55262436 None:intergenic 45.0%
CGCCCATTCCAAATATCAGA+AGG + chr7_2:55262438-55262457 None:intergenic 45.0%
AAAGAGGAACTCGGTCAGAA+CGG - chr7_2:55262580-55262599 Msa1063380:intron 45.0%
ACAACATGCCCATAGAACGT+CGG - chr7_2:55262613-55262632 Msa1063380:CDS 45.0%
CTTTACTGCCGACGTTCTAT+GGG + chr7_2:55262624-55262643 None:intergenic 45.0%
GATCCGATGGTCCAAAAAGA+GGG - chr7_2:55262799-55262818 Msa1063380:intron 45.0%
! GGGGTAACTTTCCCTCTTTT+TGG + chr7_2:55262813-55262832 None:intergenic 45.0%
CTTTGTTGGGCATCTTCTGA+TGG - chr7_2:55263525-55263544 Msa1063380:CDS 45.0%
CTCGCTGTTGGATACTTAGA+TGG - chr7_2:55263555-55263574 Msa1063380:CDS 45.0%
CAGACGACAAGTTCCAAAAC+AGG + chr7_2:55263587-55263606 None:intergenic 45.0%
!! GTGGTTTGTTGGCCTTTAGA+AGG + chr7_2:55263615-55263634 None:intergenic 45.0%
CGGGATTCTTCTTTCTGCAT+TGG + chr7_2:55263670-55263689 None:intergenic 45.0%
TCCCGGTCATTGTCTTACAA+TGG - chr7_2:55263685-55263704 Msa1063380:intron 45.0%
GGTCAGTTGTTTGTGTATGG+TGG - chr7_2:55263741-55263760 Msa1063380:CDS 45.0%
! GTGTATGGTGGTGACGAAAT+TGG - chr7_2:55263753-55263772 Msa1063380:CDS 45.0%
! TGGTGGTGACGAAATTGGAT+CGG - chr7_2:55263758-55263777 Msa1063380:CDS 45.0%
CGTGCAGACCTTACACTTAA+TGG - chr7_2:55264025-55264044 Msa1063380:intron 45.0%
TACTGCCAAGTATAGGAGCA+AGG - chr7_2:55264068-55264087 Msa1063380:intron 45.0%
ACTGCCAAGTATAGGAGCAA+GGG - chr7_2:55264069-55264088 Msa1063380:intron 45.0%
AAACCCCTTGCTCCTATACT+TGG + chr7_2:55264076-55264095 None:intergenic 45.0%
CTGAAAACTAGCTCAACACC+TGG - chr7_2:55264416-55264435 Msa1063380:intron 45.0%
TCAAATTGGCCCTTAACTGG+GGG - chr7_2:55264452-55264471 Msa1063380:intron 45.0%
TTAACCATGGACAAGTGGCT+GGG + chr7_2:55264482-55264501 None:intergenic 45.0%
TTTAACCATGGACAAGTGGC+TGG + chr7_2:55264483-55264502 None:intergenic 45.0%
AGCCACTTGTCCATGGTTAA+AGG - chr7_2:55264482-55264501 Msa1063380:intron 45.0%
CACCTTTAACCATGGACAAG+TGG + chr7_2:55264487-55264506 None:intergenic 45.0%
! TTGTCCATGGTTAAAGGTGC+TGG - chr7_2:55264488-55264507 Msa1063380:intron 45.0%
GATGTGTGGCATCACACAAA+AGG + chr7_2:55264556-55264575 None:intergenic 45.0%
TTGTTCTGCTTCCTTGCTTC+TGG - chr7_2:55264900-55264919 Msa1063380:CDS 45.0%
TACAAAAGTCATCACGGCCA+AGG + chr7_2:55265012-55265031 None:intergenic 45.0%
! TTGGCCGTGATGACTTTTGT+AGG - chr7_2:55265011-55265030 Msa1063380:CDS 45.0%
AACGCATGCTTCACATATGG+GGG + chr7_2:55265261-55265280 None:intergenic 45.0%
CAACGCATGCTTCACATATG+GGG + chr7_2:55265262-55265281 None:intergenic 45.0%
GCAACGCATGCTTCACATAT+GGG + chr7_2:55265263-55265282 None:intergenic 45.0%
TGCAACGCATGCTTCACATA+TGG + chr7_2:55265264-55265283 None:intergenic 45.0%
GTAATTGGTGAGCTTGAGCT+AGG + chr7_2:55265654-55265673 None:intergenic 45.0%
!! GAAGGTGTTTCTGGTTTCCT+TGG + chr7_2:55265726-55265745 None:intergenic 45.0%
AGGAAACCAGAAACACCTTC+AGG - chr7_2:55265726-55265745 Msa1063380:CDS 45.0%
!! GAGTTTCCTGAAGGTGTTTC+TGG + chr7_2:55265735-55265754 None:intergenic 45.0%
ACCTTCAGGAAACTCTCATG+AGG - chr7_2:55265740-55265759 Msa1063380:CDS 45.0%
TCCTCATGAGAGTTTCCTGA+AGG + chr7_2:55265744-55265763 None:intergenic 45.0%
AGTGTAGTTGAGGGTGATAC+TGG - chr7_2:55265798-55265817 Msa1063380:CDS 45.0%
!! GGATTCAGTTTTATCGCACC+TGG - chr7_2:55265917-55265936 Msa1063380:intron 45.0%
TATCGCACCTGGCATATCAT+TGG - chr7_2:55265928-55265947 Msa1063380:intron 45.0%
TGACATTGACACATCGACAC+TGG + chr7_2:55266069-55266088 None:intergenic 45.0%
!! AGTGTCGATGTGTCAATGTC+AGG - chr7_2:55266068-55266087 Msa1063380:intron 45.0%
! GTGTCGATGTGTCAATGTCA+GGG - chr7_2:55266069-55266088 Msa1063380:intron 45.0%
GAGGTTGTGATGCTATCATC+TGG + chr7_2:55266148-55266167 None:intergenic 45.0%
ATCAAATGACAAGCAGCACG+AGG - chr7_2:55266174-55266193 Msa1063380:intron 45.0%
TTTCTTGCACAGGCTCTTCA+GGG + chr7_2:55266228-55266247 None:intergenic 45.0%
TCTTCAGAAACCACACACTC+TGG - chr7_2:55266289-55266308 Msa1063380:intron 45.0%
CTTCAGAAACCACACACTCT+GGG - chr7_2:55266290-55266309 Msa1063380:intron 45.0%
TTCAGAAACCACACACTCTG+GGG - chr7_2:55266291-55266310 Msa1063380:intron 45.0%
! ACACTCTGGGGATATCCATT+TGG - chr7_2:55266303-55266322 Msa1063380:intron 45.0%
CCAATTCAGAACCATTAGCC+TGG + chr7_2:55267061-55267080 None:intergenic 45.0%
!! CCAGGCTAATGGTTCTGAAT+TGG - chr7_2:55267058-55267077 Msa1063380:intron 45.0%
AGAACGTTGTCGTGAAGACA+AGG + chr7_2:55267234-55267253 None:intergenic 45.0%
GTCAGATTCACTTCCAACAG+TGG - chr7_2:55267527-55267546 Msa1063380:intron 45.0%
ACTTCCAACAGTGGTAGTAG+TGG - chr7_2:55267536-55267555 Msa1063380:intron 45.0%
GGCTGCTTACAGAAAAACTG+GGG - chr7_2:55267936-55267955 Msa1063380:CDS 45.0%
AAACAAGCTTATGGAGAGGC+AGG - chr7_2:55268078-55268097 Msa1063380:intron 45.0%
!! ATGATGCACTAAGGAGTGTC+TGG - chr7_2:55268229-55268248 Msa1063380:CDS 45.0%
CAAACAATAGCCAAGACTGG+TGG + chr7_2:55269013-55269032 None:intergenic 45.0%
AGACCATGGAAAGGAGGAAA+TGG - chr7_2:55269237-55269256 Msa1063380:intron 45.0%
CAGCACAAGTTTCAGCAGCA+AGG - chr7_2:55259953-55259972 Msa1063380:CDS 50.0%
TGGCAGGGATGGAAGACTTA+AGG - chr7_2:55260670-55260689 Msa1063380:intron 50.0%
GCCGCTGATGACAGAAAAAG+CGG + chr7_2:55261256-55261275 None:intergenic 50.0%
GATAGAAACTGCCGGGTTTC+CGG - chr7_2:55261853-55261872 Msa1063380:intron 50.0%
TCCAGCGACCAACCAATTGT+TGG - chr7_2:55261878-55261897 Msa1063380:intron 50.0%
! TCCAACAATTGGTTGGTCGC+TGG + chr7_2:55261882-55261901 None:intergenic 50.0%
GTTGAGTTCCGAAGTTGGCT+CGG + chr7_2:55262168-55262187 None:intergenic 50.0%
CACTCGTTGAGTTCCGAAGT+TGG + chr7_2:55262173-55262192 None:intergenic 50.0%
ATCGCCTCCTGCCTTTATTG+CGG - chr7_2:55262268-55262287 Msa1063380:CDS 50.0%
TTTCCCGCAATAAAGGCAGG+AGG + chr7_2:55262275-55262294 None:intergenic 50.0%
GACTTTCCCGCAATAAAGGC+AGG + chr7_2:55262278-55262297 None:intergenic 50.0%
ATTGCGGGAAAGTCATGGTG+CGG - chr7_2:55262284-55262303 Msa1063380:CDS 50.0%
GCTTTACTGCCGACGTTCTA+TGG + chr7_2:55262625-55262644 None:intergenic 50.0%
AGAACGTCGGCAGTAAAGCA+CGG - chr7_2:55262626-55262645 Msa1063380:CDS 50.0%
CGATCCGATGGTCCAAAAAG+AGG - chr7_2:55262798-55262817 Msa1063380:intron 50.0%
!! TGTGTTCCTTGGTGGTGGAA+AGG - chr7_2:55263401-55263420 Msa1063380:CDS 50.0%
TCGTCTGCAGCACCTTCTAA+AGG - chr7_2:55263600-55263619 Msa1063380:intron 50.0%
TCTTGAATGGTCATCGGGGA+TGG - chr7_2:55263982-55264001 Msa1063380:intron 50.0%
CTGCCAAGTATAGGAGCAAG+GGG - chr7_2:55264070-55264089 Msa1063380:intron 50.0%
AAACTCCTGCGCAGATACAG+AGG + chr7_2:55264200-55264219 None:intergenic 50.0%
TTCAGAACTGCGGCTACCTA+AGG + chr7_2:55264401-55264420 None:intergenic 50.0%
!! CTTTTCCTTGTGGAGCGTCA+TGG + chr7_2:55265359-55265378 None:intergenic 50.0%
CATGACGCTCCACAAGGAAA+AGG - chr7_2:55265357-55265376 Msa1063380:intron 50.0%
TCATATCGCAGACTCCAACC+TGG + chr7_2:55265596-55265615 None:intergenic 50.0%
CTGGTAAAACGGTCTCCAAC+CGG - chr7_2:55265817-55265836 Msa1063380:CDS 50.0%
CTTTCTTGCACAGGCTCTTC+AGG + chr7_2:55266229-55266248 None:intergenic 50.0%
! GTTGAGCTGCTTTCTTGCAC+AGG + chr7_2:55266238-55266257 None:intergenic 50.0%
GCAAGAAAGCAGCTCAACTG+TGG - chr7_2:55266240-55266259 Msa1063380:intron 50.0%
ATGGATATCCCCAGAGTGTG+TGG + chr7_2:55266302-55266321 None:intergenic 50.0%
GCAGGACAAGTGGATCCAAA+TGG + chr7_2:55266321-55266340 None:intergenic 50.0%
TCACAGCAAAGCAGGACAAG+TGG + chr7_2:55266331-55266350 None:intergenic 50.0%
! ACCAGATTTGGAACTGGTGG+CGG - chr7_2:55266871-55266890 Msa1063380:intron 50.0%
TGAAAATGCGGCATCAGCAG+CGG + chr7_2:55267262-55267281 None:intergenic 50.0%
ACAATACCGCCTAGAATCGC+TGG + chr7_2:55267408-55267427 None:intergenic 50.0%
GGTAGTAGTGGCCGATGAAA+AGG - chr7_2:55267548-55267567 Msa1063380:intron 50.0%
AGTGGCCGATGAAAAGGAAG+TGG - chr7_2:55267554-55267573 Msa1063380:intron 50.0%
TCTTCAGGTGTTCTGACCCT+TGG + chr7_2:55267910-55267929 None:intergenic 50.0%
GGAGAGGCAGGAAAAATTGG+AGG - chr7_2:55268090-55268109 Msa1063380:intron 50.0%
TCAGAGAATAAGCCAGCGCA+CGG - chr7_2:55269160-55269179 Msa1063380:CDS 50.0%
CCACCATTTCCTCCTTTCCA+TGG + chr7_2:55269243-55269262 None:intergenic 50.0%
CCATGGAAAGGAGGAAATGG+TGG - chr7_2:55269240-55269259 Msa1063380:intron 50.0%
TAAGGCGCGTGCGTTCTGTT+AGG - chr7_2:55260449-55260468 Msa1063380:intron 55.0%
! ATTGGTTGGTCGCTGGACTC+CGG + chr7_2:55261875-55261894 None:intergenic 55.0%
TCGCCTCCTGCCTTTATTGC+GGG - chr7_2:55262269-55262288 Msa1063380:CDS 55.0%
GGAGATCCTTTCCACCACCA+AGG + chr7_2:55263410-55263429 None:intergenic 55.0%
GATGGCTCCATTCTCGCTGT+TGG - chr7_2:55263543-55263562 Msa1063380:CDS 55.0%
GACATCCTCTGTATCTGCGC+AGG - chr7_2:55264192-55264211 Msa1063380:intron 55.0%
CTGGGAACACCCCCAGTTAA+GGG + chr7_2:55264464-55264483 None:intergenic 55.0%
TGTTCCCAGCCACTTGTCCA+TGG - chr7_2:55264475-55264494 Msa1063380:intron 55.0%
! TGCTTCCTTGCTTCTGGCTG+TGG - chr7_2:55264906-55264925 Msa1063380:CDS 55.0%
! GCTTCCTTGCTTCTGGCTGT+GGG - chr7_2:55264907-55264926 Msa1063380:CDS 55.0%
ATTGCCCACAGCCAGAAGCA+AGG + chr7_2:55264914-55264933 None:intergenic 55.0%
CTGGCTGTGGGCAATGAATG+TGG - chr7_2:55264919-55264938 Msa1063380:CDS 55.0%
TCCGCCACCAGTTCCAAATC+TGG + chr7_2:55266875-55266894 None:intergenic 55.0%
ACGACTGTGCCAGCGATTCT+AGG - chr7_2:55267396-55267415 Msa1063380:intron 55.0%
ACTGTGCCAGCGATTCTAGG+CGG - chr7_2:55267399-55267418 Msa1063380:intron 55.0%
TCGGCCACTACTACCACTGT+TGG + chr7_2:55267543-55267562 None:intergenic 55.0%
GAGGAACTCGGTCAGAACGG+CGG - chr7_2:55262583-55262602 Msa1063380:intron 60.0%
GCTGGGAACACCCCCAGTTA+AGG + chr7_2:55264465-55264484 None:intergenic 60.0%
GCAGTCCATGACGCTCCACA+AGG - chr7_2:55265351-55265370 Msa1063380:intron 60.0%
CGCACGGCAGACCTGCAAAA+TGG - chr7_2:55269176-55269195 Msa1063380:CDS 60.0%
GTCGCTGGACTCCGGAAACC+CGG + chr7_2:55261867-55261886 None:intergenic 65.0%
GAACTCGGTCAGAACGGCGG+TGG - chr7_2:55262586-55262605 Msa1063380:intron 65.0%
TTTGCAGGTCTGCCGTGCGC+TGG + chr7_2:55269175-55269194 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 55259680 55269524 55259680 ID=Msa1063380;Name=Msa1063380
chr7_2 mRNA 55259680 55269524 55259680 ID=Msa1063380-mRNA-1;Parent=Msa1063380;Name=Msa1063380-mRNA-1;_AED=0.12;_eAED=0.12;_QI=146|0.82|0.79|0.95|1|1|24|253|1028
chr7_2 exon 55259680 55260040 55259680 ID=Msa1063380-mRNA-1:exon:10260;Parent=Msa1063380-mRNA-1
chr7_2 exon 55261093 55261155 55261093 ID=Msa1063380-mRNA-1:exon:10259;Parent=Msa1063380-mRNA-1
chr7_2 exon 55261247 55261356 55261247 ID=Msa1063380-mRNA-1:exon:10258;Parent=Msa1063380-mRNA-1
chr7_2 exon 55261429 55261500 55261429 ID=Msa1063380-mRNA-1:exon:10257;Parent=Msa1063380-mRNA-1
chr7_2 exon 55261616 55261808 55261616 ID=Msa1063380-mRNA-1:exon:10256;Parent=Msa1063380-mRNA-1
chr7_2 exon 55261896 55261989 55261896 ID=Msa1063380-mRNA-1:exon:10255;Parent=Msa1063380-mRNA-1
chr7_2 exon 55262087 55262142 55262087 ID=Msa1063380-mRNA-1:exon:10254;Parent=Msa1063380-mRNA-1
chr7_2 exon 55262222 55262339 55262222 ID=Msa1063380-mRNA-1:exon:10253;Parent=Msa1063380-mRNA-1
chr7_2 exon 55262605 55262729 55262605 ID=Msa1063380-mRNA-1:exon:10252;Parent=Msa1063380-mRNA-1
chr7_2 exon 55262814 55262996 55262814 ID=Msa1063380-mRNA-1:exon:10251;Parent=Msa1063380-mRNA-1
chr7_2 exon 55263377 55263607 55263377 ID=Msa1063380-mRNA-1:exon:10250;Parent=Msa1063380-mRNA-1
chr7_2 exon 55263722 55263849 55263722 ID=Msa1063380-mRNA-1:exon:10249;Parent=Msa1063380-mRNA-1
chr7_2 exon 55264099 55264171 55264099 ID=Msa1063380-mRNA-1:exon:10248;Parent=Msa1063380-mRNA-1
chr7_2 exon 55264259 55264335 55264259 ID=Msa1063380-mRNA-1:exon:10247;Parent=Msa1063380-mRNA-1
chr7_2 exon 55264701 55264800 55264701 ID=Msa1063380-mRNA-1:exon:10246;Parent=Msa1063380-mRNA-1
chr7_2 exon 55264892 55265230 55264892 ID=Msa1063380-mRNA-1:exon:10245;Parent=Msa1063380-mRNA-1
chr7_2 exon 55265410 55265863 55265410 ID=Msa1063380-mRNA-1:exon:10244;Parent=Msa1063380-mRNA-1
chr7_2 exon 55266899 55266944 55266899 ID=Msa1063380-mRNA-1:exon:10243;Parent=Msa1063380-mRNA-1
chr7_2 exon 55267696 55267799 55267696 ID=Msa1063380-mRNA-1:exon:10242;Parent=Msa1063380-mRNA-1
chr7_2 exon 55267918 55268009 55267918 ID=Msa1063380-mRNA-1:exon:10241;Parent=Msa1063380-mRNA-1
chr7_2 exon 55268222 55268275 55268222 ID=Msa1063380-mRNA-1:exon:10240;Parent=Msa1063380-mRNA-1
chr7_2 exon 55268444 55268528 55268444 ID=Msa1063380-mRNA-1:exon:10239;Parent=Msa1063380-mRNA-1
chr7_2 exon 55269115 55269248 55269115 ID=Msa1063380-mRNA-1:exon:10238;Parent=Msa1063380-mRNA-1
chr7_2 exon 55269331 55269524 55269331 ID=Msa1063380-mRNA-1:exon:10237;Parent=Msa1063380-mRNA-1
chr7_2 five_prime_UTR 55269379 55269524 55269379 ID=Msa1063380-mRNA-1:five_prime_utr;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55269331 55269378 55269331 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55269115 55269248 55269115 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55268444 55268528 55268444 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55268222 55268275 55268222 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55267918 55268009 55267918 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55267696 55267799 55267696 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55266899 55266944 55266899 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55265410 55265863 55265410 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55264892 55265230 55264892 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55264701 55264800 55264701 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55264259 55264335 55264259 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55264099 55264171 55264099 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55263722 55263849 55263722 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55263377 55263607 55263377 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55262814 55262996 55262814 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55262605 55262729 55262605 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55262222 55262339 55262222 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55262087 55262142 55262087 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55261896 55261989 55261896 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55261616 55261808 55261616 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55261429 55261500 55261429 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55261247 55261356 55261247 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55261093 55261155 55261093 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 CDS 55259933 55260040 55259933 ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1
chr7_2 three_prime_UTR 55259680 55259932 55259680 ID=Msa1063380-mRNA-1:three_prime_utr;Parent=Msa1063380-mRNA-1
Gene Sequence

>Msa1063380

ATGTTTGCGAAAAGATTGTTACACAAAGCTGTGCAACACCATCACAACCACAAGTTTCAGCAGCAAGGTAGTTTACAATCAACTGAATTGGATCCAAGAATTGTGATTCACTATGGCATTCCATCTTCTTCTTCAGTTCTCGCTTTTGATTCAATTCAACGACTTTTAGCTATTGGAACTTTGGATGGAAGACTTAAGGTGATTGGCGGTGATAACATTGAAGGACTTTTGATTTCTTCGAAACAACTTCCTTACAAATACTTGGAGTTCCTACAAAACCAGGGATATTTAGTTGGAGTCTTAAATGATAATGATATCCAGGTTTGGAATCTTGAAAGTCGTAGCCTTATTTGTTCTTTACAATGGGAATCCAATATTACCGCTTTTTCTGTCATCAGCGGCTCACATTTCATTTATGTCGGTGATGAGCATGGCCTGTTTTCTGTGATAAAGTTTGATGCCGAGGAAGGACAACTTTTGAAGTCATCAAATCATTTGTCAGCTAAATTTCTAAGGGGGGAACATATCGCCTCCTGCCTTTATTGCGGGAAAGTCATGGTGCGATTGTTGATTGCATTTCAGGATGGACTGCTAATTCTTTGGGATGTTTCTGAAGCTAAAATTGTGTTCCTTGGTGGTGGAAAGGATCTCCAATTGAAAGATGAAGATGAGAACTCTACTGAAACAAACGCCAATCTTCCGGCTGATATTTTAGAACAAAACCTGGGAGATAAAGAAATAAGTGCTCTTTGTTGGGCATCTTCTGATGGCTCCATTCTCGCTGTTGGATACTTAGATGGAGATATCCTGTTTTGGAACTTGTCGTCTGCAGCACCTTCTAAAGGCCAACAAACCACTTCATCTAAAAATGTTGTTAGGCTACAACTGTCCAATGCAGAAAGAAGAATCCCGGTCATTGTCTTACAATGGTCCAGTAGTCACAAATCTCATAATGATTGCACTGGTCAGTTGTTTGTGTATGGTGGTGACGAAATTGGATCGGAAGAAGTTTTGACTGTTTTAACTCTTGAATGGTCATCGGGGATGGAATCATTAAAATGCATTGGTCGTGCAGACCTTACACTTAATGGCACTTTCGCAGACTTGATTTTACTGCCAAGTATAGGAGCAAGGGGTTTAAATAGCAAAGATGATCTTTTTGTACTGACAAACCCTGGACAAATACACTATTATGATAATGATAGCTTGTCTGCATTAATGTCTGAGCAGAATAGGACATCCTCTGTATCTGCGCAGGAGTTTCCAGTGCTAATACCTATGAATAATCCATCTTTAACTGTAGCAAAACTTATCAAGTTGCCAAGTCAGTTAAATTCATCGAAAACTCTAGCTGAGGTAGCCGCAGTTCTGAAAACTAGCTCAACACCTGGTTCAGCTTCTTGTTCAAATTGGCCCTTAACTGGGGGTGTTCCCAGCCACTTGTCCATGGTTAAAGGTTCGAATGCTCCAGTGACAAAATTGGACTTTTGTTCTGCTTCCTTGCTTCTGGCTGTGGGCAATGAATGTGGTCTTGTTCGCGTGTATGATCTTAAAGACTGCTCTGATGGGAAAAAGTTCCAGTTTGTCACAGAAACAAAAAATGAAGTCCATGACGCTCCACAAGGAAAAGGACCTCATTTTAGTGCTGTTTTTTCTCTTCTCGATTCTCCAGTACAAGCATTATCTTTTGCAAACTCTGGAACCAAACTTGCTATTGGATTTTTAAGTGGTCGTGTTGGAGTCTGCGATATGAAATCATTGTCTGTTTTGTTCTTGATTGACGGTGTACCTAGCTCAAGCTCACCAATTACTTCATTGGTTTGGAGACAACAAGCATGTTTTCAAAGTGATGTAAATAGTCCAAGGAAACCAGAAACACCTTCAGGAAACTCTCATGAGGAGATACTATTTATCTTATCTAGGGATGGAAAAATTAGTGTAGTTGAGGGTGATACTGGTAAAACGAGTACTGCTGAAACTCACCCTGAAGAGCCTGTGCAAGAAAGCAGCTCAACTGTGGTAAATTCATCAGAGGCTGAACATTTCTCTTCAGAAACCACACACTCTGGGGATATCCATTTGGATCCACTTGTCCTGCTTTGCTGTGAAAATTCATTGCACTTGTTGTCCACAAAAGCATTGATACAGGGAAATAAGAAACCGATACGAAAAGTGGAACATTCAAAATCTTGCTATTGGACTACAATTTTGAAGAAAGATGACAAATTTTGTGGGATTCTATCATTGCTTCAGACTGGAACATTTGAAATAAGATCTTTACCAGATTTGGAACTGGTGGCGGAAAGCTCTTTATTGTCGATTTTAAGGTGGAATTATAAAGTGAACATGGATAAAACCATGTGTTCCGATGATTATGGACAGATTGTGCTGGCTAATGGTTCTGAATTGGCATTCATCTCATTATTAGCTGGAGAAAATGAATTCAGGAGTCTCGAGCGTTTACCTTGTCTTCACGACAACGTTCTTGCAGCCGCTGCTGATGCCGCATTTTCATTCTCTTCAAATCAGAAGAAAAAACAGACGACTGTGCCAGCGATTCTAGGCGGTATTGTCAAAGGGTTGAAAGGAGGAAAAACCTCTCATGCAGAACTGACAAAAATTCCAACCTCCAATTTCGGTCATTTGGAACATATTTTTTTCAAGCCCTCTTTGTCAGATTCACTTCCAACAGTGGTAGTAGTGGCCGATGAAAAGGAAGTGGAGCTTGATATAGATGACATTCAAATAGACGAGCCTCAAACTACAGCTTCTACTTCATCTCCTGATGTTAAAAACAAACAGAAAGATAAGTCACAAAGTGATAGGGAGAAATTGTTTCAAGGCGGAACTAATGATGATGTAAAGCCAAGGGTCAGAACACCTGAAGAAATTATGGCTGCTTACAGAAAAACTGGGGATGCTGCTTCCGTTGCCTCTCAAACAAGAAACAAGCTTATGGAGAGGCAGGAAAAATTGGAGAGAATAAGCCAGCGCACGGCAGACCTGCAAAATGGAGCTGAAAATTTTGCATCATTAGCAAACGAGCTTGTTAAGACCATGGAAAGGAGGAAATGGTGGCAAATATAG

Protein sequence

>Msa1063380

MFAKRLLHKAVQHHHNHKFQQQGSLQSTELDPRIVIHYGIPSSSSVLAFDSIQRLLAIGTLDGRLKVIGGDNIEGLLISSKQLPYKYLEFLQNQGYLVGVLNDNDIQVWNLESRSLICSLQWESNITAFSVISGSHFIYVGDEHGLFSVIKFDAEEGQLLKSSNHLSAKFLRGEHIASCLYCGKVMVRLLIAFQDGLLILWDVSEAKIVFLGGGKDLQLKDEDENSTETNANLPADILEQNLGDKEISALCWASSDGSILAVGYLDGDILFWNLSSAAPSKGQQTTSSKNVVRLQLSNAERRIPVIVLQWSSSHKSHNDCTGQLFVYGGDEIGSEEVLTVLTLEWSSGMESLKCIGRADLTLNGTFADLILLPSIGARGLNSKDDLFVLTNPGQIHYYDNDSLSALMSEQNRTSSVSAQEFPVLIPMNNPSLTVAKLIKLPSQLNSSKTLAEVAAVLKTSSTPGSASCSNWPLTGGVPSHLSMVKGSNAPVTKLDFCSASLLLAVGNECGLVRVYDLKDCSDGKKFQFVTETKNEVHDAPQGKGPHFSAVFSLLDSPVQALSFANSGTKLAIGFLSGRVGVCDMKSLSVLFLIDGVPSSSSPITSLVWRQQACFQSDVNSPRKPETPSGNSHEEILFILSRDGKISVVEGDTGKTSTAETHPEEPVQESSSTVVNSSEAEHFSSETTHSGDIHLDPLVLLCCENSLHLLSTKALIQGNKKPIRKVEHSKSCYWTTILKKDDKFCGILSLLQTGTFEIRSLPDLELVAESSLLSILRWNYKVNMDKTMCSDDYGQIVLANGSELAFISLLAGENEFRSLERLPCLHDNVLAAAADAAFSFSSNQKKKQTTVPAILGGIVKGLKGGKTSHAELTKIPTSNFGHLEHIFFKPSLSDSLPTVVVVADEKEVELDIDDIQIDEPQTTASTSSPDVKNKQKDKSQSDREKLFQGGTNDDVKPRVRTPEEIMAAYRKTGDAASVASQTRNKLMERQEKLERISQRTADLQNGAENFASLANELVKTMERRKWWQI*