Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1063380 | XP_013449160.1 | 87.701 | 1122 | 42 | 4 | 1 | 1028 | 1 | 1120 | 0.0 | 1923 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1063380 | sp|Q5T5C0|STXB5_HUMAN | 25.513 | 341 | 197 | 14 | 16 | 341 | 32 | 330 | 2.82e-15 | 84.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1063380 | A0A072U0I8 | 87.701 | 1122 | 42 | 4 | 1 | 1028 | 1 | 1120 | 0.0 | 1923 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0623070 | Msa1063380 | 0.817656 | 2.945140e-52 | -8.615850e-47 |
Msa0672660 | Msa1063380 | 0.808244 | 3.406753e-50 | -8.615850e-47 |
Msa0672700 | Msa1063380 | 0.824252 | 8.928623e-54 | -8.615850e-47 |
Msa0713510 | Msa1063380 | 0.812831 | 3.478417e-51 | -8.615850e-47 |
Msa0797250 | Msa1063380 | 0.803841 | 2.875700e-49 | -8.615850e-47 |
Msa0172080 | Msa1063380 | 0.807541 | 4.806251e-50 | -8.615850e-47 |
Msa1024700 | Msa1063380 | 0.853985 | 1.663543e-61 | -8.615850e-47 |
Msa1063380 | Msa1063400 | 0.910920 | 1.091516e-82 | -8.615850e-47 |
Msa1063380 | Msa1152420 | 0.960248 | 2.417557e-118 | -8.615850e-47 |
Msa0486690 | Msa1063380 | 0.813250 | 2.814586e-51 | -8.615850e-47 |
Msa0585210 | Msa1063380 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
Msa0931530 | Msa1063380 | 0.821759 | 3.403333e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1063380 | MtrunA17_Chr7g0242611 | 87.701 | 1122 | 42 | 4 | 1 | 1028 | 1 | 1120 | 0.0 | 1923 |
Msa1063380 | MtrunA17_Chr5g0437271 | 43.327 | 1094 | 510 | 25 | 29 | 1028 | 29 | 1106 | 0.0 | 766 |
Msa1063380 | MtrunA17_Chr8g0370421 | 25.686 | 1129 | 655 | 34 | 1 | 1024 | 1 | 1050 | 4.54e-80 | 283 |
Msa1063380 | MtrunA17_Chr5g0407051 | 40.351 | 114 | 68 | 0 | 25 | 138 | 47 | 160 | 4.42e-24 | 99.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1063380 | AT5G05570.2 | 43.212 | 1127 | 513 | 22 | 1 | 1028 | 1 | 1099 | 0.0 | 822 |
Msa1063380 | AT5G05570.1 | 42.274 | 1152 | 513 | 23 | 1 | 1028 | 1 | 1124 | 0.0 | 808 |
Msa1063380 | AT4G35560.1 | 25.492 | 1118 | 665 | 36 | 1 | 1024 | 1 | 1044 | 6.66e-67 | 244 |
Msa1063380 | AT4G35560.2 | 25.469 | 1119 | 665 | 36 | 1 | 1024 | 1 | 1045 | 8.47e-67 | 244 |
Find 216 sgRNAs with CRISPR-Local
Find 594 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGATTGTTGATTGCATTTC+AGG | 0.092632 | 7_2:-55265844 | Msa1063380:CDS |
CTTTCTTGCACAGGCTCTTC+AGG | 0.145395 | 7_2:+55262956 | None:intergenic |
GAGTTTCCTGAAGGTGTTTC+TGG | 0.183985 | 7_2:+55263450 | None:intergenic |
TGTTCAAATTGGCCCTTAAC+TGG | 0.191166 | 7_2:-55264733 | Msa1063380:CDS |
GTTCAGCTTCTTGTTCAAAT+TGG | 0.205651 | 7_2:-55264744 | Msa1063380:CDS |
TTGTTCTGCTTCCTTGCTTC+TGG | 0.232304 | 7_2:-55264282 | Msa1063380:CDS |
ATTTGTCAGCTAAATTTCTA+AGG | 0.258315 | 7_2:-55267697 | Msa1063380:CDS |
GAAAAGACAATGCTACAAAA+AGG | 0.264102 | 7_2:+55259786 | None:intergenic |
AGGATGGACTGCTAATTCTT+TGG | 0.270386 | 7_2:-55265824 | Msa1063380:CDS |
AGACTGGAACATTTGAAATA+AGG | 0.273849 | 7_2:-55262604 | Msa1063380:intron |
CGTGCAGACCTTACACTTAA+TGG | 0.282163 | 7_2:-55265157 | Msa1063380:CDS |
CTCCAAACCAATGAAGTAAT+TGG | 0.283599 | 7_2:+55263516 | None:intergenic |
GTACAGATCTTTACCAGATT+TGG | 0.286118 | 7_2:-55262323 | Msa1063380:intron |
TCTGGAACCAAACTTGCTAT+TGG | 0.293339 | 7_2:-55263738 | Msa1063380:CDS |
CCATAGTGAATCACAATTCT+TGG | 0.294823 | 7_2:+55269181 | None:intergenic |
ATGTTCCAAATGACCGAAAT+TGG | 0.296250 | 7_2:+55261698 | None:intergenic |
AACCTCCAATTTCGGTCATT+TGG | 0.297075 | 7_2:-55261703 | Msa1063380:CDS |
GGGAGGAAATCTTGATAATT+CGG | 0.300267 | 7_2:+55259807 | None:intergenic |
TGCTTCCTTGCTTCTGGCTG+TGG | 0.309147 | 7_2:-55264276 | Msa1063380:CDS |
CCCATTGTAAAGAACAAATA+AGG | 0.321997 | 7_2:+55267964 | None:intergenic |
GGAGGAAATCTTGATAATTC+GGG | 0.322167 | 7_2:+55259808 | None:intergenic |
CGCACGGCAGACCTGCAAAA+TGG | 0.323423 | 7_2:-55260006 | Msa1063380:CDS |
CCATGACTTTCCCGCAATAA+AGG | 0.323471 | 7_2:+55266903 | None:intergenic |
GTTGATAATTTCCAGGCTAA+TGG | 0.324986 | 7_2:-55262135 | Msa1063380:intron |
CACCAATTACTTCATTGGTT+TGG | 0.328055 | 7_2:-55263518 | Msa1063380:CDS |
AACATTCAAAATCTTGCTAT+TGG | 0.328585 | 7_2:-55262679 | Msa1063380:CDS |
GAAGGTGTTTCTGGTTTCCT+TGG | 0.329425 | 7_2:+55263459 | None:intergenic |
TCAAACAAGAAACAAGCTTA+TGG | 0.330995 | 7_2:-55261113 | Msa1063380:CDS |
GGATGGACTGCTAATTCTTT+GGG | 0.332819 | 7_2:-55265823 | Msa1063380:CDS |
CCAGGCTAATGGTTCTGAAT+TGG | 0.336109 | 7_2:-55262124 | Msa1063380:intron |
TCTCATCTTCATCTTTCAAT+TGG | 0.339397 | 7_2:+55265754 | None:intergenic |
TCGCCTCCTGCCTTTATTGC+GGG | 0.343138 | 7_2:-55266913 | Msa1063380:CDS |
AAAATTCCAACCTCCAATTT+CGG | 0.346963 | 7_2:-55261711 | Msa1063380:CDS |
TCCGCCACCAGTTCCAAATC+TGG | 0.348858 | 7_2:+55262310 | None:intergenic |
CAGAACACCTGAAGAAATTA+TGG | 0.350563 | 7_2:-55261267 | Msa1063380:CDS |
AGATACTATTTATCTTATCT+AGG | 0.352165 | 7_2:-55263419 | Msa1063380:CDS |
AGCCACTTGTCCATGGTTAA+AGG | 0.352397 | 7_2:-55264700 | Msa1063380:intron |
AAGAAATAAGTGCTCTTTGT+TGG | 0.355090 | 7_2:-55265671 | Msa1063380:CDS |
ACGACTGTGCCAGCGATTCT+AGG | 0.356726 | 7_2:-55261786 | Msa1063380:CDS |
CAGATAAGTCACAAAGTGAT+AGG | 0.361846 | 7_2:-55261337 | Msa1063380:CDS |
GAATGCTCCAGTGACAAAAT+TGG | 0.364061 | 7_2:-55264309 | Msa1063380:CDS |
CTCGCTGTTGGATACTTAGA+TGG | 0.366231 | 7_2:-55265627 | Msa1063380:CDS |
AAGCTCACCAATTACTTCAT+TGG | 0.367596 | 7_2:-55263523 | Msa1063380:CDS |
ACCATGTGTTCCGATGATTA+TGG | 0.368780 | 7_2:-55262235 | Msa1063380:CDS |
TAGATGGAGATATCCTGTTT+TGG | 0.368789 | 7_2:-55265611 | Msa1063380:CDS |
TTTGCAGGTCTGCCGTGCGC+TGG | 0.369771 | 7_2:+55260010 | None:intergenic |
AAGGAAGTGGAGCTTGATAT+AGG | 0.374339 | 7_2:-55261615 | Msa1063380:intron |
TAGCTGGAGAAAATGAATTC+AGG | 0.375722 | 7_2:-55262086 | Msa1063380:intron |
GTTAAAGATGGATTATTCAT+AGG | 0.380339 | 7_2:+55264950 | None:intergenic |
TCTTCAGGTGTTCTGACCCT+TGG | 0.381611 | 7_2:+55261275 | None:intergenic |
CCACCATTTCCTCCTTTCCA+TGG | 0.383097 | 7_2:+55259942 | None:intergenic |
CTTTGTTGGGCATCTTCTGA+TGG | 0.384102 | 7_2:-55265657 | Msa1063380:CDS |
TAAGCAGCCATAATTTCTTC+AGG | 0.386811 | 7_2:+55261260 | None:intergenic |
CGGGATTCTTCTTTCTGCAT+TGG | 0.389526 | 7_2:+55265515 | None:intergenic |
ATTATGAGATTTGTGACTAC+TGG | 0.403349 | 7_2:+55265473 | None:intergenic |
TAGTTTACAATCAACTGAAT+TGG | 0.404948 | 7_2:-55269206 | Msa1063380:CDS |
TATATTATGTTATATATTTG+TGG | 0.405348 | 7_2:-55259853 | Msa1063380:three_prime_UTR |
ACTGGTCAGTTGTTTGTGTA+TGG | 0.405579 | 7_2:-55265444 | Msa1063380:CDS |
CCTTATTTGTTCTTTACAAT+GGG | 0.406302 | 7_2:-55267964 | Msa1063380:CDS |
CCAAGAATTGTGATTCACTA+TGG | 0.406867 | 7_2:-55269181 | Msa1063380:CDS |
TGAAACAAACGCCAATCTTC+CGG | 0.407195 | 7_2:-55265724 | Msa1063380:CDS |
TTAACTCTTGAATGGTCATC+GGG | 0.409662 | 7_2:-55265205 | Msa1063380:CDS |
TAAAATATCAGCCGGAAGAT+TGG | 0.414385 | 7_2:+55265713 | None:intergenic |
TCTTCAGAAACCACACACTC+TGG | 0.415190 | 7_2:-55262893 | Msa1063380:CDS |
AGAAATAAGTGCTCTTTGTT+GGG | 0.416921 | 7_2:-55265670 | Msa1063380:CDS |
AAACCCCTTGCTCCTATACT+TGG | 0.419341 | 7_2:+55265109 | None:intergenic |
TTTCTTGCACAGGCTCTTCA+GGG | 0.420443 | 7_2:+55262957 | None:intergenic |
ACAACTTCCTTACAAATACT+TGG | 0.420654 | 7_2:-55268446 | Msa1063380:CDS |
GTGTATGGTGGTGACGAAAT+TGG | 0.423490 | 7_2:-55265429 | Msa1063380:CDS |
CAAAACCAGGGATATTTAGT+TGG | 0.430818 | 7_2:-55268247 | Msa1063380:CDS |
GTTCAAATTGGCCCTTAACT+GGG | 0.438451 | 7_2:-55264732 | Msa1063380:CDS |
GCCTTATTTGTTCTTTACAA+TGG | 0.440656 | 7_2:-55267965 | Msa1063380:CDS |
CACTTATTTCTTTATCTCCC+AGG | 0.443709 | 7_2:+55265682 | None:intergenic |
TCATAATAGTGTATTTGTCC+AGG | 0.446171 | 7_2:+55265052 | None:intergenic |
GCAAAAGATAATGCTTGTAC+TGG | 0.446732 | 7_2:+55263765 | None:intergenic |
TAAGTATCCAACAGCGAGAA+TGG | 0.448584 | 7_2:+55265632 | None:intergenic |
CATTAATGTCTGAGCAGAAT+AGG | 0.450554 | 7_2:-55265012 | Msa1063380:CDS |
ACCAGATTTGGAACTGGTGG+CGG | 0.450594 | 7_2:-55262311 | Msa1063380:CDS |
ACACTCTGGGGATATCCATT+TGG | 0.452074 | 7_2:-55262879 | Msa1063380:CDS |
GTTGAGCTGCTTTCTTGCAC+AGG | 0.454580 | 7_2:+55262947 | None:intergenic |
GACCATTGTAAGACAATGAC+CGG | 0.459143 | 7_2:+55265495 | None:intergenic |
GCTTCCTTGCTTCTGGCTGT+GGG | 0.461533 | 7_2:-55264275 | Msa1063380:CDS |
GCATTCATCTCATTATTAGC+TGG | 0.466277 | 7_2:-55262102 | Msa1063380:CDS |
TTTAACCATGGACAAGTGGC+TGG | 0.467006 | 7_2:+55264702 | None:intergenic |
ATCTTTACCAGATTTGGAAC+TGG | 0.469123 | 7_2:-55262317 | Msa1063380:CDS |
GTGGTTTGTTGGCCTTTAGA+AGG | 0.470784 | 7_2:+55265570 | None:intergenic |
GGTAGTAGTGGCCGATGAAA+AGG | 0.471467 | 7_2:-55261634 | Msa1063380:CDS |
GAAGCTAAAATTGTGTTCCT+TGG | 0.471798 | 7_2:-55265792 | Msa1063380:CDS |
AGTGTAGTTGAGGGTGATAC+TGG | 0.474842 | 7_2:-55263384 | Msa1063380:CDS |
CGAAAGTGCCATTAAGTGTA+AGG | 0.475049 | 7_2:+55265149 | None:intergenic |
GATGGCTCCATTCTCGCTGT+TGG | 0.475285 | 7_2:-55265639 | Msa1063380:CDS |
CTTAAATGATAATGATATCC+AGG | 0.479937 | 7_2:-55268221 | Msa1063380:intron |
TTCGATGAATTTAACTGACT+TGG | 0.480073 | 7_2:+55264905 | None:intergenic |
TGGCAGGGATGGAAGACTTA+AGG | 0.481066 | 7_2:-55268512 | Msa1063380:intron |
AGGAAACCAGAAACACCTTC+AGG | 0.482972 | 7_2:-55263456 | Msa1063380:CDS |
CTTCAAAAGTTGTCCTTCCT+CGG | 0.483030 | 7_2:+55267730 | None:intergenic |
TTCAAATTGGCCCTTAACTG+GGG | 0.487106 | 7_2:-55264731 | Msa1063380:CDS |
CGTACCTCCAAGTATTTGTA+AGG | 0.489987 | 7_2:+55268439 | None:intergenic |
GATCTTAAAGACTGCTCTGA+TGG | 0.492473 | 7_2:-55264137 | Msa1063380:CDS |
CCTTTATTGCGGGAAAGTCA+TGG | 0.492804 | 7_2:-55266903 | Msa1063380:CDS |
AAACAAGCTTATGGAGAGGC+AGG | 0.493216 | 7_2:-55261104 | Msa1063380:CDS |
GATACTATTTATCTTATCTA+GGG | 0.496579 | 7_2:-55263418 | Msa1063380:CDS |
CAAACTTTATCACAGAAAAC+AGG | 0.497283 | 7_2:+55267756 | None:intergenic |
CTTCAGAAACCACACACTCT+GGG | 0.497726 | 7_2:-55262892 | Msa1063380:CDS |
CAGACGACAAGTTCCAAAAC+AGG | 0.497951 | 7_2:+55265598 | None:intergenic |
GATAGGGAGAAATTGTTTCA+AGG | 0.499523 | 7_2:-55261320 | Msa1063380:CDS |
TGTTCCCAGCCACTTGTCCA+TGG | 0.500792 | 7_2:-55264707 | Msa1063380:CDS |
TGATGAATTGATGATGATGT+TGG | 0.501546 | 7_2:+55269383 | None:intergenic |
TTTGTCAGCTAAATTTCTAA+GGG | 0.502655 | 7_2:-55267696 | Msa1063380:CDS |
GATGGAAGACTTAAGGTGAT+TGG | 0.507610 | 7_2:-55268505 | Msa1063380:CDS |
ATTCTATCATTGCTTCAGAC+TGG | 0.508271 | 7_2:-55262620 | Msa1063380:CDS |
ATTCTAGGCGGTATTGTCAA+AGG | 0.509217 | 7_2:-55261771 | Msa1063380:CDS |
AGACCATGGAAAGGAGGAAA+TGG | 0.509342 | 7_2:-55259945 | Msa1063380:CDS |
AGACTCCAACTAAATATCCC+TGG | 0.514072 | 7_2:+55268242 | None:intergenic |
GTCCACAAAAGCATTGATAC+AGG | 0.515849 | 7_2:-55262813 | Msa1063380:intron |
CTATTTATCTTATCTAGGGA+TGG | 0.517108 | 7_2:-55263414 | Msa1063380:CDS |
CATGACGCTCCACAAGGAAA+AGG | 0.517766 | 7_2:-55263825 | Msa1063380:CDS |
TGGAAGTGAATCTGACAAAG+AGG | 0.518269 | 7_2:+55261662 | None:intergenic |
ATCGCCTCCTGCCTTTATTG+CGG | 0.518686 | 7_2:-55266914 | Msa1063380:CDS |
GCTAAAATTGTGTTCCTTGG+TGG | 0.519198 | 7_2:-55265789 | Msa1063380:CDS |
AAGCTTGTTTCTTGTTTGAG+AGG | 0.522959 | 7_2:+55261117 | None:intergenic |
GCAGGACAAGTGGATCCAAA+TGG | 0.523689 | 7_2:+55262864 | None:intergenic |
TCGTCTGCAGCACCTTCTAA+AGG | 0.524578 | 7_2:-55265582 | Msa1063380:CDS |
AATTCCAGCACCTTTAACCA+TGG | 0.525371 | 7_2:+55264690 | None:intergenic |
CATAATAGTGTATTTGTCCA+GGG | 0.526367 | 7_2:+55265053 | None:intergenic |
TTCTAGGCGGTATTGTCAAA+GGG | 0.527510 | 7_2:-55261770 | Msa1063380:CDS |
TTTAACTCTTGAATGGTCAT+CGG | 0.527590 | 7_2:-55265206 | Msa1063380:CDS |
TCTTGAATGGTCATCGGGGA+TGG | 0.528250 | 7_2:-55265200 | Msa1063380:CDS |
TAAGAAACCGATACGAAAAG+TGG | 0.528713 | 7_2:-55262702 | Msa1063380:CDS |
GAAGTAGAAGCTGTAGTTTG+AGG | 0.535734 | 7_2:+55261458 | None:intergenic |
AAAATTGTGTTCCTTGGTGG+TGG | 0.536465 | 7_2:-55265786 | Msa1063380:CDS |
GCGAGAACTGAAGAAGAAGA+TGG | 0.538241 | 7_2:+55269154 | None:intergenic |
CTTGCAGTTCCTACAAAACC+AGG | 0.538891 | 7_2:-55268260 | Msa1063380:intron |
ATGGAATCATTAAAATGCAT+TGG | 0.541425 | 7_2:-55265181 | Msa1063380:CDS |
GACTTTCCCGCAATAAAGGC+AGG | 0.542141 | 7_2:+55266907 | None:intergenic |
GTAATTGGTGAGCTTGAGCT+AGG | 0.545627 | 7_2:+55263531 | None:intergenic |
ACTATAATATTCAGTTATGT+CGG | 0.546627 | 7_2:-55267791 | Msa1063380:intron |
TACTGCCAAGTATAGGAGCA+AGG | 0.547133 | 7_2:-55265114 | Msa1063380:CDS |
ATCTTAAAGACTGCTCTGAT+GGG | 0.549270 | 7_2:-55264136 | Msa1063380:CDS |
GACATCCTCTGTATCTGCGC+AGG | 0.549663 | 7_2:-55264990 | Msa1063380:CDS |
TGAGGGTGATACTGGTAAAA+CGG | 0.551223 | 7_2:-55263376 | Msa1063380:intron |
CTGGCTGTGGGCAATGAATG+TGG | 0.552459 | 7_2:-55264263 | Msa1063380:CDS |
ACTTCCTTACAAATACTTGG+AGG | 0.553928 | 7_2:-55268443 | Msa1063380:intron |
AGTGGCCGATGAAAAGGAAG+TGG | 0.556924 | 7_2:-55261628 | Msa1063380:CDS |
TTTGAACAAGAAGCTGAACC+AGG | 0.557074 | 7_2:+55264748 | None:intergenic |
AAATGACCGAAATTGGAGGT+TGG | 0.557233 | 7_2:+55261705 | None:intergenic |
GTTTCTTGTTTGAGAGGCAA+CGG | 0.558418 | 7_2:+55261123 | None:intergenic |
TTATTCATAGGTATTAGCAC+TGG | 0.563489 | 7_2:+55264962 | None:intergenic |
TTCCAAATGACCGAAATTGG+AGG | 0.563828 | 7_2:+55261701 | None:intergenic |
AAATCTCATAATGATTGCAC+TGG | 0.566926 | 7_2:-55265462 | Msa1063380:CDS |
CACAATCTGTCCATAATCAT+CGG | 0.567485 | 7_2:+55262225 | None:intergenic |
ACTGCCAAGTATAGGAGCAA+GGG | 0.568001 | 7_2:-55265113 | Msa1063380:CDS |
ATAAAGTTTGATGCCGAGGA+AGG | 0.569053 | 7_2:-55267743 | Msa1063380:CDS |
ACAATACCGCCTAGAATCGC+TGG | 0.571926 | 7_2:+55261777 | None:intergenic |
TCGGCCACTACTACCACTGT+TGG | 0.573495 | 7_2:+55261642 | None:intergenic |
TCAAATTGGCCCTTAACTGG+GGG | 0.574355 | 7_2:-55264730 | Msa1063380:CDS |
TTTACCAGATTTGGAACTGG+TGG | 0.575160 | 7_2:-55262314 | Msa1063380:CDS |
CAGCACAAGTTTCAGCAGCA+AGG | 0.575593 | 7_2:-55269229 | Msa1063380:CDS |
TCACAGCAAAGCAGGACAAG+TGG | 0.577487 | 7_2:+55262854 | None:intergenic |
GGTATTGTCAAAGGGTTGAA+AGG | 0.577937 | 7_2:-55261762 | Msa1063380:CDS |
CACCTTTAACCATGGACAAG+TGG | 0.579178 | 7_2:+55264698 | None:intergenic |
CTGCCAAGTATAGGAGCAAG+GGG | 0.582079 | 7_2:-55265112 | Msa1063380:CDS |
ATTGGCGGTGATAACATTGA+AGG | 0.582531 | 7_2:-55268487 | Msa1063380:CDS |
AGATAAGTCACAAAGTGATA+GGG | 0.585441 | 7_2:-55261336 | Msa1063380:CDS |
GGTCAGTTGTTTGTGTATGG+TGG | 0.585640 | 7_2:-55265441 | Msa1063380:CDS |
TCCATAATCATCGGAACACA+TGG | 0.587707 | 7_2:+55262234 | None:intergenic |
TTGTTGATTGCATTTCAGGA+TGG | 0.588937 | 7_2:-55265840 | Msa1063380:CDS |
GTGGAATTATAAAGTGAACA+TGG | 0.590013 | 7_2:-55262263 | Msa1063380:CDS |
TTAACCATGGACAAGTGGCT+GGG | 0.594772 | 7_2:+55264703 | None:intergenic |
CAATGCAGAAAGAAGAATCC+CGG | 0.595689 | 7_2:-55265514 | Msa1063380:CDS |
TGTGTTCCTTGGTGGTGGAA+AGG | 0.595907 | 7_2:-55265781 | Msa1063380:CDS |
CTAATGATGATGTAAAGCCA+AGG | 0.597325 | 7_2:-55261292 | Msa1063380:CDS |
TGAAAATGCGGCATCAGCAG+CGG | 0.598708 | 7_2:+55261923 | None:intergenic |
GGAAGACTTAAGGTGATTGG+CGG | 0.599982 | 7_2:-55268502 | Msa1063380:CDS |
AAAGTGATGTAAATAGTCCA+AGG | 0.600594 | 7_2:-55263476 | Msa1063380:CDS |
AGAACGTTGTCGTGAAGACA+AGG | 0.607591 | 7_2:+55261951 | None:intergenic |
TTTCACAATATAAATGCAGG+AGG | 0.608241 | 7_2:-55259693 | Msa1063380:three_prime_UTR |
TGTGATAAAGTTTGATGCCG+AGG | 0.610244 | 7_2:-55267747 | Msa1063380:CDS |
ATGGATATCCCCAGAGTGTG+TGG | 0.616612 | 7_2:+55262883 | None:intergenic |
AGTTATGTCGGTGATGAGCA+TGG | 0.618124 | 7_2:-55267779 | Msa1063380:CDS |
TCCTCATGAGAGTTTCCTGA+AGG | 0.619317 | 7_2:+55263441 | None:intergenic |
TTGTTAAGACCATGGAAAGG+AGG | 0.620536 | 7_2:-55259951 | Msa1063380:CDS |
CCATGGAAAGGAGGAAATGG+TGG | 0.620933 | 7_2:-55259942 | Msa1063380:CDS |
GTCAGATTCACTTCCAACAG+TGG | 0.622879 | 7_2:-55261655 | Msa1063380:CDS |
CTGAAAACTAGCTCAACACC+TGG | 0.628293 | 7_2:-55264766 | Msa1063380:CDS |
GGAAGTGAATCTGACAAAGA+GGG | 0.629100 | 7_2:+55261663 | None:intergenic |
TCAGAGAATAAGCCAGCGCA+CGG | 0.629437 | 7_2:-55260022 | Msa1063380:intron |
ATTGATGATGATGTTGGCGT+AGG | 0.632414 | 7_2:+55269389 | None:intergenic |
TTCATCGAAAACTCTAGCTG+AGG | 0.632853 | 7_2:-55264891 | Msa1063380:intron |
AAACTCCTGCGCAGATACAG+AGG | 0.632998 | 7_2:+55264985 | None:intergenic |
TAATGATGATGTAAAGCCAA+GGG | 0.634140 | 7_2:-55261291 | Msa1063380:CDS |
ACTTCCAACAGTGGTAGTAG+TGG | 0.637558 | 7_2:-55261646 | Msa1063380:CDS |
ATTGCCCACAGCCAGAAGCA+AGG | 0.639276 | 7_2:+55264271 | None:intergenic |
AACTGTGGTAAATTCATCAG+AGG | 0.643998 | 7_2:-55262927 | Msa1063380:CDS |
TCCCGGTCATTGTCTTACAA+TGG | 0.645986 | 7_2:-55265497 | Msa1063380:CDS |
TTGTCAGCTAAATTTCTAAG+GGG | 0.648364 | 7_2:-55267695 | Msa1063380:intron |
TGATTATGGACAGATTGTGC+TGG | 0.650059 | 7_2:-55262221 | Msa1063380:intron |
GCAAGAAAGCAGCTCAACTG+TGG | 0.652840 | 7_2:-55262942 | Msa1063380:CDS |
GGAGATCCTTTCCACCACCA+AGG | 0.654335 | 7_2:+55265775 | None:intergenic |
ATTGTCAAAGGGTTGAAAGG+AGG | 0.661007 | 7_2:-55261759 | Msa1063380:CDS |
ATTGCGGGAAAGTCATGGTG+CGG | 0.662014 | 7_2:-55266898 | Msa1063380:intron |
GCAGTCCATGACGCTCCACA+AGG | 0.663227 | 7_2:-55263831 | Msa1063380:intron |
ATTTGAAGAGAATGAAAATG+CGG | 0.663872 | 7_2:+55261911 | None:intergenic |
GAGGAAATCTTGATAATTCG+GGG | 0.667669 | 7_2:+55259809 | None:intergenic |
ACCTTCAGGAAACTCTCATG+AGG | 0.668647 | 7_2:-55263442 | Msa1063380:CDS |
CAAGAAACAAGCTTATGGAG+AGG | 0.669710 | 7_2:-55261108 | Msa1063380:CDS |
TTCAGAAACCACACACTCTG+GGG | 0.670158 | 7_2:-55262891 | Msa1063380:CDS |
AAACGAGCTTGTTAAGACCA+TGG | 0.673577 | 7_2:-55259959 | Msa1063380:CDS |
TGGTGGTGACGAAATTGGAT+CGG | 0.673771 | 7_2:-55265424 | Msa1063380:CDS |
ACCATTGTAAGACAATGACC+GGG | 0.689366 | 7_2:+55265496 | None:intergenic |
TTTCCCGCAATAAAGGCAGG+AGG | 0.704597 | 7_2:+55266910 | None:intergenic |
TAACTCTTGAATGGTCATCG+GGG | 0.709545 | 7_2:-55265204 | Msa1063380:CDS |
AGCTTGTTAAGACCATGGAA+AGG | 0.710363 | 7_2:-55259954 | Msa1063380:CDS |
AGGGAGAAATTGTTTCAAGG+CGG | 0.715664 | 7_2:-55261317 | Msa1063380:CDS |
TTGCAGTTCCTACAAAACCA+GGG | 0.724437 | 7_2:-55268259 | Msa1063380:intron |
ACTGTGCCAGCGATTCTAGG+CGG | 0.756920 | 7_2:-55261783 | Msa1063380:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAAATTATTTTAAAAAA+CGG | - | chr7_2:55266743-55266762 | Msa1063380:intron | 0.0% |
!!! | TATTAAAGTTGTTATTTTTT+TGG | - | chr7_2:55260207-55260226 | Msa1063380:intron | 10.0% |
!! | TAGAGAAAAAATTAAATTAA+AGG | - | chr7_2:55263211-55263230 | Msa1063380:intron | 10.0% |
!! | AATTTATCAATTATACATAA+TGG | + | chr7_2:55266826-55266845 | None:intergenic | 10.0% |
!! | ATTATGTATAATTGATAAAT+TGG | - | chr7_2:55266825-55266844 | Msa1063380:intron | 10.0% |
!! | TATATTATGTTATATATTTG+TGG | - | chr7_2:55269329-55269348 | Msa1063380:intron | 10.0% |
!!! | GTGTTTTAAGAATAATAATA+TGG | + | chr7_2:55259768-55259787 | None:intergenic | 15.0% |
!! | TTATTATAATTATCTGTGAT+GGG | - | chr7_2:55260324-55260343 | Msa1063380:intron | 15.0% |
!!! | AAATGAGTTTTTTTTTTTGT+TGG | - | chr7_2:55260373-55260392 | Msa1063380:intron | 15.0% |
!!! | TAATTTCTTGTTTTATGTTT+TGG | - | chr7_2:55261510-55261529 | Msa1063380:intron | 15.0% |
!! | AATCATAATTCAAAATTCAA+GGG | + | chr7_2:55261982-55262001 | None:intergenic | 15.0% |
!! | AAATCATAATTCAAAATTCA+AGG | + | chr7_2:55261983-55262002 | None:intergenic | 15.0% |
!! | AAAAAAAATTCTACAAATGA+AGG | - | chr7_2:55262381-55262400 | Msa1063380:intron | 15.0% |
!!! | AAATTTGATTTCTCTAATTA+GGG | + | chr7_2:55262482-55262501 | None:intergenic | 15.0% |
!! | CATTATTAATCACAATTAAT+AGG | + | chr7_2:55263171-55263190 | None:intergenic | 15.0% |
!! | TAAATATTCATATTAAGTGA+AGG | - | chr7_2:55263860-55263879 | Msa1063380:intron | 15.0% |
!! | ATTATTCTATATTTAATCCT+TGG | - | chr7_2:55264992-55265011 | Msa1063380:CDS | 15.0% |
!! | ATATATGATATATTCTTACA+GGG | - | chr7_2:55266454-55266473 | Msa1063380:intron | 15.0% |
!! | ACAACAATTACTAAATTTAT+TGG | - | chr7_2:55266794-55266813 | Msa1063380:intron | 15.0% |
!!! | CTTATTAAACTGTTTTTTAA+TGG | + | chr7_2:55267357-55267376 | None:intergenic | 15.0% |
!!! | TTGATTAATTTTTTTGTCAT+TGG | + | chr7_2:55269456-55269475 | None:intergenic | 15.0% |
!! | CATTTATATTGTGAAAAAAT+TGG | + | chr7_2:55269485-55269504 | None:intergenic | 15.0% |
!! | CAATTGTTAGTTAGTTAAAA+TGG | - | chr7_2:55260264-55260283 | Msa1063380:intron | 20.0% |
!!! | TAAAATGGACTCAAAAATTT+AGG | - | chr7_2:55260279-55260298 | Msa1063380:intron | 20.0% |
!!! | AAAATGGACTCAAAAATTTA+GGG | - | chr7_2:55260280-55260299 | Msa1063380:intron | 20.0% |
!! | GGAAAAAAAAATGTTATCTT+GGG | - | chr7_2:55260301-55260320 | Msa1063380:intron | 20.0% |
!! | GTTATTATAATTATCTGTGA+TGG | - | chr7_2:55260323-55260342 | Msa1063380:intron | 20.0% |
!!! | CTCATTTTTCAGAAATTAAA+AGG | + | chr7_2:55260360-55260379 | None:intergenic | 20.0% |
!! | ATTCTTTCAACAATTTATGA+TGG | + | chr7_2:55261017-55261036 | None:intergenic | 20.0% |
!! | TCATAAATTGTTGAAAGAAT+TGG | - | chr7_2:55261017-55261036 | Msa1063380:intron | 20.0% |
!! | AGAATTGGTACATATATAAT+TGG | - | chr7_2:55261032-55261051 | Msa1063380:intron | 20.0% |
!! | ACTATAATATTCAGTTATGT+CGG | - | chr7_2:55261391-55261410 | Msa1063380:intron | 20.0% |
!! | ATCACTTGAAATAATAAAGA+TGG | + | chr7_2:55262119-55262138 | None:intergenic | 20.0% |
!! | AATGGAACAAAAAAAAAACT+AGG | + | chr7_2:55262317-55262336 | None:intergenic | 20.0% |
!!! | TAGTTTTTTTTTTGTTCCAT+TGG | - | chr7_2:55262316-55262335 | Msa1063380:CDS | 20.0% |
!!! | GAAATTTGATTTCTCTAATT+AGG | + | chr7_2:55262483-55262502 | None:intergenic | 20.0% |
!!! | TATTTTTTGTTGATGAAATC+TGG | - | chr7_2:55262689-55262708 | Msa1063380:CDS | 20.0% |
!! | AAGCAAAGATTTCAAATATT+CGG | + | chr7_2:55262956-55262975 | None:intergenic | 20.0% |
!!! | ATATTTTACTACTATTGTCT+TGG | - | chr7_2:55263107-55263126 | Msa1063380:intron | 20.0% |
!! | AGGAGAAAAAAATAAAATCA+TGG | - | chr7_2:55263231-55263250 | Msa1063380:intron | 20.0% |
!!! | TGATGAATATACTTTTTTGT+AGG | + | chr7_2:55263284-55263303 | None:intergenic | 20.0% |
!!! | CATTTTGAATTGATAAAGTT+CGG | - | chr7_2:55263827-55263846 | Msa1063380:CDS | 20.0% |
!! | TCTTATCATTGTTCATATTA+TGG | - | chr7_2:55264354-55264373 | Msa1063380:intron | 20.0% |
!!! | AATTGAAAGAGTTTATTTTG+TGG | - | chr7_2:55264511-55264530 | Msa1063380:intron | 20.0% |
!!! | ATTGAAAGAGTTTATTTTGT+GGG | - | chr7_2:55264512-55264531 | Msa1063380:intron | 20.0% |
!!! | ATTTTGAAACAACAATATTG+TGG | + | chr7_2:55264623-55264642 | None:intergenic | 20.0% |
!! | ATAAAAAATCTTTACACTGA+AGG | + | chr7_2:55264667-55264686 | None:intergenic | 20.0% |
!!! | TTAATTGGTTACTTTATCTA+AGG | - | chr7_2:55264960-55264979 | Msa1063380:CDS | 20.0% |
!!! | TATTTTATGCACAAATATCA+TGG | + | chr7_2:55265289-55265308 | None:intergenic | 20.0% |
!! | AGTTTAACAATATAAGTCAA+GGG | + | chr7_2:55265326-55265345 | None:intergenic | 20.0% |
!! | AAGTTTAACAATATAAGTCA+AGG | + | chr7_2:55265327-55265346 | None:intergenic | 20.0% |
!! | AATTTCTCAATTGATTAATG+TGG | - | chr7_2:55265555-55265574 | Msa1063380:CDS | 20.0% |
!! | AGATACTATTTATCTTATCT+AGG | - | chr7_2:55265763-55265782 | Msa1063380:CDS | 20.0% |
!! | GATACTATTTATCTTATCTA+GGG | - | chr7_2:55265764-55265783 | Msa1063380:CDS | 20.0% |
!!! | ACAATGTGAATACAAATTTT+AGG | + | chr7_2:55266421-55266440 | None:intergenic | 20.0% |
!! | CATATATGATATATTCTTAC+AGG | - | chr7_2:55266453-55266472 | Msa1063380:intron | 20.0% |
!! | ATAATTGATAAATTGGCAAA+TGG | - | chr7_2:55266832-55266851 | Msa1063380:intron | 20.0% |
!!! | ATTAAACTGTTTTTTAATGG+CGG | + | chr7_2:55267354-55267373 | None:intergenic | 20.0% |
!! | AATAATTCTTCACTTTGTAA+TGG | - | chr7_2:55267650-55267669 | Msa1063380:intron | 20.0% |
!! | AAACTATTACTAATCTTTGT+AGG | + | chr7_2:55267811-55267830 | None:intergenic | 20.0% |
!! | TTCATAAAAGCTAAGAAAAT+TGG | + | chr7_2:55268153-55268172 | None:intergenic | 20.0% |
!! | ACAATGTAATGAATTAAGAT+AGG | - | chr7_2:55268256-55268275 | Msa1063380:CDS | 20.0% |
!!! | TTATCTTTAGTTTCTTAGAT+AGG | - | chr7_2:55268455-55268474 | Msa1063380:CDS | 20.0% |
!!! | TTATCTTTAGTTTCTTAGAT+AGG | + | chr7_2:55268455-55268474 | None:intergenic | 20.0% |
!! | AAATAAGCTCAAGTTATATT+AGG | + | chr7_2:55268749-55268768 | None:intergenic | 20.0% |
!! | TGTATGTAATGAATTAAGAT+AGG | + | chr7_2:55268784-55268803 | None:intergenic | 20.0% |
!!! | TTTTTTCACAATATAAATGC+AGG | - | chr7_2:55269486-55269505 | Msa1063380:five_prime_UTR | 20.0% |
! | AAAAATCATCTCTTTCTTTC+TGG | - | chr7_2:55259879-55259898 | Msa1063380:three_prime_UTR | 25.0% |
! | AAAATCATCTCTTTCTTTCT+GGG | - | chr7_2:55259880-55259899 | Msa1063380:three_prime_UTR | 25.0% |
! | TAGTTTACAATCAACTGAAT+TGG | - | chr7_2:55259976-55259995 | Msa1063380:CDS | 25.0% |
! | AATAACAGAATCAATAGAGA+AGG | + | chr7_2:55260107-55260126 | None:intergenic | 25.0% |
! | GGGAAAAAAAAATGTTATCT+TGG | - | chr7_2:55260300-55260319 | Msa1063380:intron | 25.0% |
!!! | AAGTAGGTTTTTTTAGTTGT+TGG | - | chr7_2:55260402-55260421 | Msa1063380:intron | 25.0% |
!!! | AGTAGGTTTTTTTAGTTGTT+GGG | - | chr7_2:55260403-55260422 | Msa1063380:intron | 25.0% |
! | GTTCCTGATTTAATGTTATA+AGG | - | chr7_2:55260431-55260450 | Msa1063380:intron | 25.0% |
! | ATTAGAACAATCAGACATTA+TGG | + | chr7_2:55260545-55260564 | None:intergenic | 25.0% |
! | ACATCTAACTCTATATCAAT+CGG | + | chr7_2:55260785-55260804 | None:intergenic | 25.0% |
!! | TGAATGTGATATTGATGTTT+TGG | - | chr7_2:55260887-55260906 | Msa1063380:intron | 25.0% |
!! | CTTAAATGATAATGATATCC+AGG | - | chr7_2:55260961-55260980 | Msa1063380:intron | 25.0% |
!! | TTCAACAATTTATGATGGAA+GGG | + | chr7_2:55261012-55261031 | None:intergenic | 25.0% |
!! | TTTCAACAATTTATGATGGA+AGG | + | chr7_2:55261013-55261032 | None:intergenic | 25.0% |
! | AAGAAAAAGGACTAATTGAA+TGG | + | chr7_2:55261169-55261188 | None:intergenic | 25.0% |
!! | TTCAATTAGTCCTTTTTCTT+TGG | - | chr7_2:55261169-55261188 | Msa1063380:intron | 25.0% |
!! | CCTTATTTGTTCTTTACAAT+GGG | - | chr7_2:55261218-55261237 | Msa1063380:intron | 25.0% |
! | AAATAACTAGTAGCAATAAG+AGG | + | chr7_2:55261331-55261350 | None:intergenic | 25.0% |
! | TGCTACTAGTTATTTGAAAA+TGG | - | chr7_2:55261336-55261355 | Msa1063380:CDS | 25.0% |
! | ATTTGTCAGCTAAATTTCTA+AGG | - | chr7_2:55261485-55261504 | Msa1063380:intron | 25.0% |
! | TTTGTCAGCTAAATTTCTAA+GGG | - | chr7_2:55261486-55261505 | Msa1063380:intron | 25.0% |
! | TTTCGTTGTATAACAATACT+CGG | + | chr7_2:55261651-55261670 | None:intergenic | 25.0% |
! | GAATGATATAAGATGACATT+TGG | + | chr7_2:55261762-55261781 | None:intergenic | 25.0% |
! | TATCAAAAGGATCAAAACAA+TGG | + | chr7_2:55261837-55261856 | None:intergenic | 25.0% |
!!! | GAAATCTGATTTTAGGAAAT+TGG | + | chr7_2:55262052-55262071 | None:intergenic | 25.0% |
!! | ATATCTGGAAATCTGATTTT+AGG | + | chr7_2:55262059-55262078 | None:intergenic | 25.0% |
! | GTTAAACTGAAAGTTATATC+TGG | + | chr7_2:55262074-55262093 | None:intergenic | 25.0% |
! | ATCTGTAGTACATTATTTGA+AGG | - | chr7_2:55262238-55262257 | Msa1063380:CDS | 25.0% |
! | TCTGTAGTACATTATTTGAA+GGG | - | chr7_2:55262239-55262258 | Msa1063380:CDS | 25.0% |
! | AATTCTACAAATGAAGGAAA+AGG | - | chr7_2:55262387-55262406 | Msa1063380:intron | 25.0% |
!! | TTTTCGTTGTTATCTCTTTT+GGG | + | chr7_2:55262509-55262528 | None:intergenic | 25.0% |
!! | ATTTTCGTTGTTATCTCTTT+TGG | + | chr7_2:55262510-55262529 | None:intergenic | 25.0% |
!! | ATCTGAACTTTTCAAAGATT+AGG | - | chr7_2:55262528-55262547 | Msa1063380:intron | 25.0% |
! | ACTTATGATTTATATTCCGT+AGG | - | chr7_2:55263049-55263068 | Msa1063380:intron | 25.0% |
! | CTTATGATTTATATTCCGTA+GGG | - | chr7_2:55263050-55263069 | Msa1063380:intron | 25.0% |
!!! | TTTTGTTCTAAAATATCAGC+CGG | + | chr7_2:55263480-55263499 | None:intergenic | 25.0% |
!!! | TGATATTTTAGAACAAAACC+TGG | - | chr7_2:55263482-55263501 | Msa1063380:CDS | 25.0% |
!!! | GATATTTTAGAACAAAACCT+GGG | - | chr7_2:55263483-55263502 | Msa1063380:CDS | 25.0% |
!!! | AACAACATTTTTAGATGAAG+TGG | + | chr7_2:55263634-55263653 | None:intergenic | 25.0% |
! | CTTCATCTAAAAATGTTGTT+AGG | - | chr7_2:55263634-55263653 | Msa1063380:intron | 25.0% |
! | ATGGAATCATTAAAATGCAT+TGG | - | chr7_2:55264001-55264020 | Msa1063380:intron | 25.0% |
!!! | GTTAAAGATGGATTATTCAT+AGG | + | chr7_2:55264235-55264254 | None:intergenic | 25.0% |
! | TAGCAAATATAAGACAAGAT+TGG | + | chr7_2:55264578-55264597 | None:intergenic | 25.0% |
!! | TCTTATATTTGCTACATAGA+AGG | - | chr7_2:55264584-55264603 | Msa1063380:intron | 25.0% |
! | TGTCAGAAATCTTTCTTAAT+TGG | - | chr7_2:55264945-55264964 | Msa1063380:CDS | 25.0% |
! | TAAAAATCCAATAGCAAGTT+TGG | + | chr7_2:55265454-55265473 | None:intergenic | 25.0% |
!! | GTTGATTCCTTTAAATGTAA+TGG | + | chr7_2:55265843-55265862 | None:intergenic | 25.0% |
! | GCAATTTCAATGTATGTTAT+AGG | - | chr7_2:55265864-55265883 | Msa1063380:intron | 25.0% |
! | ATTTCATCAAGAACACAATA+TGG | - | chr7_2:55265896-55265915 | Msa1063380:intron | 25.0% |
! | AAAATCTCTTAGAATCTATG+AGG | + | chr7_2:55266119-55266138 | None:intergenic | 25.0% |
!! | AACATTCAAAATCTTGCTAT+TGG | - | chr7_2:55266503-55266522 | Msa1063380:intron | 25.0% |
!! | AAGAAAGATGACAAATTTTG+TGG | - | chr7_2:55266538-55266557 | Msa1063380:intron | 25.0% |
!! | AGAAAGATGACAAATTTTGT+GGG | - | chr7_2:55266539-55266558 | Msa1063380:intron | 25.0% |
! | GTATGCTTGATAAGAAAATA+CGG | - | chr7_2:55266634-55266653 | Msa1063380:intron | 25.0% |
! | GGAAATTATCAACATAAGAT+AGG | + | chr7_2:55267040-55267059 | None:intergenic | 25.0% |
!!! | ATCTTATGTTGATAATTTCC+AGG | - | chr7_2:55267040-55267059 | Msa1063380:intron | 25.0% |
! | GTTAAGATGGATAAAAGAAA+AGG | - | chr7_2:55267164-55267183 | Msa1063380:intron | 25.0% |
!!! | GGACATTTCTATTTTATTTC+AGG | - | chr7_2:55267193-55267212 | Msa1063380:intron | 25.0% |
! | ATTTGAAGAGAATGAAAATG+CGG | + | chr7_2:55267274-55267293 | None:intergenic | 25.0% |
! | TTCAAATCAGAAGAAAAAAC+AGG | - | chr7_2:55267287-55267306 | Msa1063380:intron | 25.0% |
!!! | TTCTGTTTGTTTTTAACATC+AGG | + | chr7_2:55267754-55267773 | None:intergenic | 25.0% |
! | GATGTTAAAAACAAACAGAA+AGG | - | chr7_2:55267754-55267773 | Msa1063380:CDS | 25.0% |
! | AAAAGTGAAAACAGAAAGAA+TGG | + | chr7_2:55267976-55267995 | None:intergenic | 25.0% |
! | ATAAACTATTGTCTGATTTC+AGG | - | chr7_2:55268027-55268046 | Msa1063380:intron | 25.0% |
! | TGAGCTTATTCTATTCTATT+GGG | + | chr7_2:55268282-55268301 | None:intergenic | 25.0% |
! | TTGAGCTTATTCTATTCTAT+TGG | + | chr7_2:55268283-55268302 | None:intergenic | 25.0% |
! | GAATAAGCTCAAGTTATATT+AGG | - | chr7_2:55268291-55268310 | Msa1063380:intron | 25.0% |
! | AATGCCAATGCTATAAATAT+TGG | - | chr7_2:55268383-55268402 | Msa1063380:intron | 25.0% |
! | CATTCCAATATTTATAGCAT+TGG | + | chr7_2:55268390-55268409 | None:intergenic | 25.0% |
! | AATGTCAGTGCTATAAATAT+TGG | + | chr7_2:55268657-55268676 | None:intergenic | 25.0% |
!!! | TTGAGCTTATTTTATTCTAC+TGG | - | chr7_2:55268757-55268776 | Msa1063380:intron | 25.0% |
!!! | TGAGCTTATTTTATTCTACT+GGG | - | chr7_2:55268758-55268777 | Msa1063380:intron | 25.0% |
!!! | AACTATTTCTACAATCAAAG+AGG | - | chr7_2:55268823-55268842 | Msa1063380:intron | 25.0% |
!!! | ACTATTTCTACAATCAAAGA+GGG | - | chr7_2:55268824-55268843 | Msa1063380:intron | 25.0% |
! | TAGAGAAGCTTATAGAAATA+AGG | - | chr7_2:55268897-55268916 | Msa1063380:intron | 25.0% |
! | TTGAAAGAGCTTATCAAAAT+AGG | + | chr7_2:55268942-55268961 | None:intergenic | 25.0% |
! | ACTTATTGGAACTTATCTTA+TGG | + | chr7_2:55268986-55269005 | None:intergenic | 25.0% |
!! | TTTAGAACCATTTAGAATCA+TGG | + | chr7_2:55269115-55269134 | None:intergenic | 25.0% |
! | AAAAGACAATGCTACAAAAA+GGG | + | chr7_2:55269398-55269417 | None:intergenic | 25.0% |
!!! | ATGGTTTTGCTTTGTTTTGT+TGG | + | chr7_2:55259749-55259768 | None:intergenic | 30.0% |
!! | TGATGAATTGATGATGATGT+TGG | + | chr7_2:55259802-55259821 | None:intergenic | 30.0% |
! | TAACAATCTTTTCGCAAACA+TGG | + | chr7_2:55259827-55259846 | None:intergenic | 30.0% |
! | TGATTTTTCTTACGTTGTGA+TGG | + | chr7_2:55259867-55259886 | None:intergenic | 30.0% |
!! | ATTCAACGACTTTTAGCTAT+TGG | - | chr7_2:55260061-55260080 | Msa1063380:intron | 30.0% |
CTAACAATTGTTTCATGCAA+TGG | + | chr7_2:55260254-55260273 | None:intergenic | 30.0% | |
!! | TTTTTGTTGGTGAGTAAAGT+AGG | - | chr7_2:55260386-55260405 | Msa1063380:intron | 30.0% |
!!! | GTAGGTTTTTTTAGTTGTTG+GGG | - | chr7_2:55260404-55260423 | Msa1063380:intron | 30.0% |
CATAATCATTGTCCGTTATT+AGG | - | chr7_2:55260486-55260505 | Msa1063380:intron | 30.0% | |
AATGTCTGATTGTTCTAATC+TGG | - | chr7_2:55260546-55260565 | Msa1063380:intron | 30.0% | |
TATTGTGAGATATATGTAGC+TGG | - | chr7_2:55260590-55260609 | Msa1063380:intron | 30.0% | |
ACAACTTCCTTACAAATACT+TGG | - | chr7_2:55260736-55260755 | Msa1063380:intron | 30.0% | |
GATATAGAGTTAGATGTTCT+TGG | - | chr7_2:55260788-55260807 | Msa1063380:intron | 30.0% | |
! | TCAACAATTTATGATGGAAG+GGG | + | chr7_2:55261011-55261030 | None:intergenic | 30.0% |
!! | GCCTTATTTGTTCTTTACAA+TGG | - | chr7_2:55261217-55261236 | Msa1063380:intron | 30.0% |
CCCATTGTAAAGAACAAATA+AGG | + | chr7_2:55261221-55261240 | None:intergenic | 30.0% | |
CAAACTTTATCACAGAAAAC+AGG | + | chr7_2:55261429-55261448 | None:intergenic | 30.0% | |
TTGTCAGCTAAATTTCTAAG+GGG | - | chr7_2:55261487-55261506 | Msa1063380:intron | 30.0% | |
TTGCAGATCATGGTAAATAT+TGG | + | chr7_2:55261674-55261693 | None:intergenic | 30.0% | |
TATAAGATGACATTTGGACA+TGG | + | chr7_2:55261756-55261775 | None:intergenic | 30.0% | |
AAAGAATTCCAACAATTGGT+TGG | + | chr7_2:55261889-55261908 | None:intergenic | 30.0% | |
TGTGAAAGAATTCCAACAAT+TGG | + | chr7_2:55261893-55261912 | None:intergenic | 30.0% | |
TTTCACAACCTTATTCTTCT+GGG | - | chr7_2:55261906-55261925 | Msa1063380:CDS | 30.0% | |
AGGAAATTGGATTCTTCTAT+TGG | + | chr7_2:55262039-55262058 | None:intergenic | 30.0% | |
CTGTAGTACATTATTTGAAG+GGG | - | chr7_2:55262240-55262259 | Msa1063380:CDS | 30.0% | |
!!! | AGTTCCTCTTTTTCAATTTG+GGG | + | chr7_2:55262571-55262590 | None:intergenic | 30.0% |
!!! | GAGTTCCTCTTTTTCAATTT+GGG | + | chr7_2:55262572-55262591 | None:intergenic | 30.0% |
CAAATTGAAAAAGAGGAACT+CGG | - | chr7_2:55262571-55262590 | Msa1063380:intron | 30.0% | |
CAAAGATTTCAAATATTCGG+TGG | + | chr7_2:55262953-55262972 | None:intergenic | 30.0% | |
TAAAATCATGGAGAATCGAT+CGG | - | chr7_2:55263243-55263262 | Msa1063380:intron | 30.0% | |
!!! | TACTTTTTTGTAGGAGAATC+AGG | + | chr7_2:55263275-55263294 | None:intergenic | 30.0% |
TCTCATCTTCATCTTTCAAT+TGG | + | chr7_2:55263431-55263450 | None:intergenic | 30.0% | |
AAGAAATAAGTGCTCTTTGT+TGG | - | chr7_2:55263511-55263530 | Msa1063380:CDS | 30.0% | |
AGAAATAAGTGCTCTTTGTT+GGG | - | chr7_2:55263512-55263531 | Msa1063380:CDS | 30.0% | |
!! | TTTTAGATGAAGTGGTTTGT+TGG | + | chr7_2:55263626-55263645 | None:intergenic | 30.0% |
ATTATGAGATTTGTGACTAC+TGG | + | chr7_2:55263712-55263731 | None:intergenic | 30.0% | |
AAATCTCATAATGATTGCAC+TGG | - | chr7_2:55263720-55263739 | Msa1063380:intron | 30.0% | |
!! | AATCAACGAATTGTTTCTAC+TGG | - | chr7_2:55263888-55263907 | Msa1063380:intron | 30.0% |
TCAAGAGTTAAAACCTGTAA+AGG | + | chr7_2:55263968-55263987 | None:intergenic | 30.0% | |
!!! | TACAGGTTTTAACTCTTGAA+TGG | - | chr7_2:55263969-55263988 | Msa1063380:intron | 30.0% |
TTTAACTCTTGAATGGTCAT+CGG | - | chr7_2:55263976-55263995 | Msa1063380:intron | 30.0% | |
! | TTGATTTTACTGCCAAGTAT+AGG | - | chr7_2:55264061-55264080 | Msa1063380:intron | 30.0% |
CATAATAGTGTATTTGTCCA+GGG | + | chr7_2:55264132-55264151 | None:intergenic | 30.0% | |
TCATAATAGTGTATTTGTCC+AGG | + | chr7_2:55264133-55264152 | None:intergenic | 30.0% | |
TTATTCATAGGTATTAGCAC+TGG | + | chr7_2:55264223-55264242 | None:intergenic | 30.0% | |
! | AGTTTTGCTACAGTTAAAGA+TGG | + | chr7_2:55264247-55264266 | None:intergenic | 30.0% |
TTCGATGAATTTAACTGACT+TGG | + | chr7_2:55264280-55264299 | None:intergenic | 30.0% | |
CAACTTATTTCGTTTACCTT+AGG | - | chr7_2:55264382-55264401 | Msa1063380:intron | 30.0% | |
!! | TATTTTGTGGGCTATTCTAA+TGG | - | chr7_2:55264524-55264543 | Msa1063380:intron | 30.0% |
!!! | TTTTTGTTTCTGTGACAAAC+TGG | + | chr7_2:55265080-55265099 | None:intergenic | 30.0% |
GTCACAGAAACAAAAAATGA+AGG | - | chr7_2:55265084-55265103 | Msa1063380:CDS | 30.0% | |
! | AAAAATCTAGCCTTCTACAA+TGG | + | chr7_2:55265125-55265144 | None:intergenic | 30.0% |
AAAAGGAACAAGAATGAAGA+AGG | + | chr7_2:55265236-55265255 | None:intergenic | 30.0% | |
GAAAAAACAGCACTAAAATG+AGG | + | chr7_2:55265384-55265403 | None:intergenic | 30.0% | |
!!! | CTTGCTATTGGATTTTTAAG+TGG | - | chr7_2:55265456-55265475 | Msa1063380:CDS | 30.0% |
ATCAACTTTGCTAACAAGAA+AGG | + | chr7_2:55265518-55265537 | None:intergenic | 30.0% | |
!! | TCTGTTTTGTTCTTGATTGA+CGG | - | chr7_2:55265624-55265643 | Msa1063380:CDS | 30.0% |
AAAGTGATGTAAATAGTCCA+AGG | - | chr7_2:55265706-55265725 | Msa1063380:CDS | 30.0% | |
CTATTTATCTTATCTAGGGA+TGG | - | chr7_2:55265768-55265787 | Msa1063380:CDS | 30.0% | |
TGGAAAAATTAGTGTAGTTG+AGG | - | chr7_2:55265788-55265807 | Msa1063380:CDS | 30.0% | |
GGAAAAATTAGTGTAGTTGA+GGG | - | chr7_2:55265789-55265808 | Msa1063380:CDS | 30.0% | |
ATTCCTTTAAATGTAATGGC+CGG | + | chr7_2:55265839-55265858 | None:intergenic | 30.0% | |
AAAATTTCCAATGATATGCC+AGG | + | chr7_2:55265938-55265957 | None:intergenic | 30.0% | |
CTGGAATTCATTTGAGAAAA+TGG | + | chr7_2:55266050-55266069 | None:intergenic | 30.0% | |
! | ACAAATTTTAGGCGATAAAC+TGG | + | chr7_2:55266410-55266429 | None:intergenic | 30.0% |
! | AGACTGGAACATTTGAAATA+AGG | - | chr7_2:55266578-55266597 | Msa1063380:intron | 30.0% |
!!! | AAGCACTGGTTTTATTCTTT+TGG | - | chr7_2:55266604-55266623 | Msa1063380:intron | 30.0% |
CATTGCTGTAGAAAAACAAA+GGG | - | chr7_2:55266682-55266701 | Msa1063380:intron | 30.0% | |
!!! | GCTCTTTATTGTCGATTTTA+AGG | - | chr7_2:55266897-55266916 | Msa1063380:intron | 30.0% |
!!! | CTTTATTGTCGATTTTAAGG+TGG | - | chr7_2:55266900-55266919 | Msa1063380:CDS | 30.0% |
GTGGAATTATAAAGTGAACA+TGG | - | chr7_2:55266919-55266938 | Msa1063380:CDS | 30.0% | |
! | CCTCACAAATTTGAAAGTAT+TGG | + | chr7_2:55266998-55267017 | None:intergenic | 30.0% |
CCAATACTTTCAAATTTGTG+AGG | - | chr7_2:55266995-55267014 | Msa1063380:intron | 30.0% | |
AAGATAGGCACATAAAGAAA+TGG | + | chr7_2:55267025-55267044 | None:intergenic | 30.0% | |
ATCTTTGCCATTCTTTAATG+AGG | - | chr7_2:55267120-55267139 | Msa1063380:intron | 30.0% | |
GTTATCTCCTCATTAAAGAA+TGG | + | chr7_2:55267130-55267149 | None:intergenic | 30.0% | |
!! | TTTTTAATGGCGGAAACTTT+AGG | + | chr7_2:55267344-55267363 | None:intergenic | 30.0% |
AAAATTCCAACCTCCAATTT+CGG | - | chr7_2:55267471-55267490 | Msa1063380:intron | 30.0% | |
! | TCAAAATAGAGCATGCTTTT+AGG | + | chr7_2:55267679-55267698 | None:intergenic | 30.0% |
AGATAAGTCACAAAGTGATA+GGG | - | chr7_2:55267846-55267865 | Msa1063380:intron | 30.0% | |
! | TAATGATGATGTAAAGCCAA+GGG | - | chr7_2:55267891-55267910 | Msa1063380:intron | 30.0% |
TCAAACAAGAAACAAGCTTA+TGG | - | chr7_2:55268069-55268088 | Msa1063380:intron | 30.0% | |
CATGATTGTCTTGAAGAATT+AGG | + | chr7_2:55268188-55268207 | None:intergenic | 30.0% | |
! | AGAAAGTATATGATGCACTA+AGG | - | chr7_2:55268220-55268239 | Msa1063380:intron | 30.0% |
TTATATTAGGTGATGAGTCA+TGG | - | chr7_2:55268304-55268323 | Msa1063380:intron | 30.0% | |
TAACCAATGACTCATCATAA+TGG | + | chr7_2:55268686-55268705 | None:intergenic | 30.0% | |
TAACCAATGACTCATCATAA+TGG | - | chr7_2:55268686-55268705 | Msa1063380:intron | 30.0% | |
ATGAGTCATGGTATTCTATA+AGG | + | chr7_2:55268724-55268743 | None:intergenic | 30.0% | |
TTATATTAGGTGATGAGTCA+TGG | + | chr7_2:55268304-55268323 | None:intergenic | 30.0% | |
TACAATCAAAGAGGGAATAA+GGG | - | chr7_2:55268832-55268851 | Msa1063380:intron | 30.0% | |
ATTGTCATGCATAGTACATA+AGG | - | chr7_2:55269057-55269076 | Msa1063380:intron | 30.0% | |
GAAAAGACAATGCTACAAAA+AGG | + | chr7_2:55269399-55269418 | None:intergenic | 30.0% | |
! | GTAGCATTGTCTTTTCTTTT+TGG | - | chr7_2:55269403-55269422 | Msa1063380:five_prime_UTR | 30.0% |
TTTCACAATATAAATGCAGG+AGG | - | chr7_2:55269489-55269508 | Msa1063380:five_prime_UTR | 30.0% | |
CCATAGTGAATCACAATTCT+TGG | + | chr7_2:55260004-55260023 | None:intergenic | 35.0% | |
CCAAGAATTGTGATTCACTA+TGG | - | chr7_2:55260001-55260020 | Msa1063380:CDS | 35.0% | |
GCGCCTTATAACATTAAATC+AGG | + | chr7_2:55260437-55260456 | None:intergenic | 35.0% | |
AAAAACCGTCTGCCTAATAA+CGG | + | chr7_2:55260501-55260520 | None:intergenic | 35.0% | |
! | ATCTGGTGATGTTTGAAAGA+TGG | - | chr7_2:55260563-55260582 | Msa1063380:intron | 35.0% |
TGGAAAATGCATGTCGTAAT+AGG | - | chr7_2:55260610-55260629 | Msa1063380:intron | 35.0% | |
GCTCATACTGCTTAGTTTAA+TGG | - | chr7_2:55260650-55260669 | Msa1063380:intron | 35.0% | |
ATACTGCTTAGTTTAATGGC+AGG | - | chr7_2:55260654-55260673 | Msa1063380:intron | 35.0% | |
TACTGCTTAGTTTAATGGCA+GGG | - | chr7_2:55260655-55260674 | Msa1063380:intron | 35.0% | |
ACTTCCTTACAAATACTTGG+AGG | - | chr7_2:55260739-55260758 | Msa1063380:intron | 35.0% | |
!!! | CTAAATATCCCTGGTTTTGT+AGG | + | chr7_2:55260934-55260953 | None:intergenic | 35.0% |
CAAAACCAGGGATATTTAGT+TGG | - | chr7_2:55260935-55260954 | Msa1063380:intron | 35.0% | |
GACAGAAAAGGAAATTTACC+TGG | + | chr7_2:55260982-55261001 | None:intergenic | 35.0% | |
TTGACTTCCTAGCTCATTAT+AGG | - | chr7_2:55261117-55261136 | Msa1063380:CDS | 35.0% | |
ATCACAACCTATAATGAGCT+AGG | + | chr7_2:55261127-55261146 | None:intergenic | 35.0% | |
! | ATTAGTCCTTTTTCTTTGGC+AGG | - | chr7_2:55261173-55261192 | Msa1063380:intron | 35.0% |
GACAGAAAAAGCGGTAATAT+TGG | + | chr7_2:55261247-55261266 | None:intergenic | 35.0% | |
CATAGCATGTGTATTGCATT+GGG | + | chr7_2:55261727-55261746 | None:intergenic | 35.0% | |
ACATAGCATGTGTATTGCAT+TGG | + | chr7_2:55261728-55261747 | None:intergenic | 35.0% | |
! | ATCCTTTTGATAGAAACTGC+CGG | - | chr7_2:55261845-55261864 | Msa1063380:intron | 35.0% |
CTTTCACAACCTTATTCTTC+TGG | - | chr7_2:55261905-55261924 | Msa1063380:CDS | 35.0% | |
TTCTTCTATTGGCATTGCTT+TGG | + | chr7_2:55262028-55262047 | None:intergenic | 35.0% | |
GCACAGTTTAAATCATCCAA+TGG | + | chr7_2:55262335-55262354 | None:intergenic | 35.0% | |
TGAATTTCAATAATGCCACG+TGG | + | chr7_2:55262357-55262376 | None:intergenic | 35.0% | |
! | AGCCTTCTGATATTTGGAAT+GGG | - | chr7_2:55262433-55262452 | Msa1063380:intron | 35.0% |
! | TTTTCAATTTGGGGGTTCTT+TGG | + | chr7_2:55262562-55262581 | None:intergenic | 35.0% |
!!! | GTTCCTCTTTTTCAATTTGG+GGG | + | chr7_2:55262570-55262589 | None:intergenic | 35.0% |
!!! | CGAGTTCCTCTTTTTCAATT+TGG | + | chr7_2:55262573-55262592 | None:intergenic | 35.0% |
! | CTAGCATAATCTATTTGCTG+GGG | + | chr7_2:55262655-55262674 | None:intergenic | 35.0% |
CCTAGCATAATCTATTTGCT+GGG | + | chr7_2:55262656-55262675 | None:intergenic | 35.0% | |
ACCTAGCATAATCTATTTGC+TGG | + | chr7_2:55262657-55262676 | None:intergenic | 35.0% | |
CAAATAGATTATGCTAGGTC+TGG | - | chr7_2:55262658-55262677 | Msa1063380:CDS | 35.0% | |
TGATTGTTTAATCGATCCGA+TGG | - | chr7_2:55262786-55262805 | Msa1063380:intron | 35.0% | |
TCACTTTATCGTGAGAAAGT+CGG | + | chr7_2:55262834-55262853 | None:intergenic | 35.0% | |
! | CAGTCAGCTTTCAAAGATTT+TGG | + | chr7_2:55262906-55262925 | None:intergenic | 35.0% |
AAGCCGTGTAAAGAAATCTT+GGG | - | chr7_2:55262977-55262996 | Msa1063380:CDS | 35.0% | |
AGTCCCAAGATTTCTTTACA+CGG | + | chr7_2:55262983-55263002 | None:intergenic | 35.0% | |
! | CAGATTGTTGATTGCATTTC+AGG | - | chr7_2:55263338-55263357 | Msa1063380:intron | 35.0% |
! | TTGTTGATTGCATTTCAGGA+TGG | - | chr7_2:55263342-55263361 | Msa1063380:intron | 35.0% |
GAAGCTAAAATTGTGTTCCT+TGG | - | chr7_2:55263390-55263409 | Msa1063380:CDS | 35.0% | |
TAAAATATCAGCCGGAAGAT+TGG | + | chr7_2:55263472-55263491 | None:intergenic | 35.0% | |
! | CACTTATTTCTTTATCTCCC+AGG | + | chr7_2:55263503-55263522 | None:intergenic | 35.0% |
! | TAGATGGAGATATCCTGTTT+TGG | - | chr7_2:55263571-55263590 | Msa1063380:CDS | 35.0% |
!!! | TTTTCTTAGTTTGCGTGCAT+TGG | - | chr7_2:55263918-55263937 | Msa1063380:intron | 35.0% |
GAGAGACACGTTAAAGTTTA+GGG | + | chr7_2:55263946-55263965 | None:intergenic | 35.0% | |
TTAACTCTTGAATGGTCATC+GGG | - | chr7_2:55263977-55263996 | Msa1063380:intron | 35.0% | |
CATTAATGTCTGAGCAGAAT+AGG | - | chr7_2:55264170-55264189 | Msa1063380:intron | 35.0% | |
TATGAACAATGATAAGAGCC+AGG | + | chr7_2:55264351-55264370 | None:intergenic | 35.0% | |
GTTCAGCTTCTTGTTCAAAT+TGG | - | chr7_2:55264438-55264457 | Msa1063380:intron | 35.0% | |
ATAAGACAAGATTGGATGTG+TGG | + | chr7_2:55264570-55264589 | None:intergenic | 35.0% | |
! | TATTTGCTACATAGAAGGAG+AGG | - | chr7_2:55264589-55264608 | Msa1063380:intron | 35.0% |
! | AAATTTCCTGTGTGTTTTGC+AGG | - | chr7_2:55264825-55264844 | Msa1063380:intron | 35.0% |
! | CAAAAGTCCAATTTTGTCAC+TGG | + | chr7_2:55264883-55264902 | None:intergenic | 35.0% |
ATCTTAAAGACTGCTCTGAT+GGG | - | chr7_2:55265046-55265065 | Msa1063380:CDS | 35.0% | |
TGATGACAGAATCGATAGTT+TGG | + | chr7_2:55265199-55265218 | None:intergenic | 35.0% | |
GCAAAAGATAATGCTTGTAC+TGG | + | chr7_2:55265420-55265439 | None:intergenic | 35.0% | |
! | GCATTATCTTTTGCAAACTC+TGG | - | chr7_2:55265426-55265445 | Msa1063380:CDS | 35.0% |
TGGATCAATTACTTCTTTCC+AGG | - | chr7_2:55265575-55265594 | Msa1063380:CDS | 35.0% | |
TCAATTACTTCTTTCCAGGT+TGG | - | chr7_2:55265579-55265598 | Msa1063380:CDS | 35.0% | |
AAGCTCACCAATTACTTCAT+TGG | - | chr7_2:55265659-55265678 | Msa1063380:CDS | 35.0% | |
! | CACCAATTACTTCATTGGTT+TGG | - | chr7_2:55265664-55265683 | Msa1063380:CDS | 35.0% |
CTCCAAACCAATGAAGTAAT+TGG | + | chr7_2:55265669-55265688 | None:intergenic | 35.0% | |
AACTGTGGTAAATTCATCAG+AGG | - | chr7_2:55266255-55266274 | Msa1063380:intron | 35.0% | |
! | ATGAATTTTCACAGCAAAGC+AGG | + | chr7_2:55266339-55266358 | None:intergenic | 35.0% |
TTTAGGCGATAAACTGGTAA+TGG | + | chr7_2:55266404-55266423 | None:intergenic | 35.0% | |
TAAGAAACCGATACGAAAAG+TGG | - | chr7_2:55266480-55266499 | Msa1063380:intron | 35.0% | |
!! | GAATGTTCCACTTTTCGTAT+CGG | + | chr7_2:55266490-55266509 | None:intergenic | 35.0% |
ATTCTATCATTGCTTCAGAC+TGG | - | chr7_2:55266562-55266581 | Msa1063380:intron | 35.0% | |
! | TTGAAATAAGGTGAAAGCAC+TGG | - | chr7_2:55266590-55266609 | Msa1063380:intron | 35.0% |
GCATTGCTGTAGAAAAACAA+AGG | - | chr7_2:55266681-55266700 | Msa1063380:intron | 35.0% | |
GTACAGATCTTTACCAGATT+TGG | - | chr7_2:55266859-55266878 | Msa1063380:intron | 35.0% | |
! | ATCTTTACCAGATTTGGAAC+TGG | - | chr7_2:55266865-55266884 | Msa1063380:intron | 35.0% |
CACAATCTGTCCATAATCAT+CGG | + | chr7_2:55266960-55266979 | None:intergenic | 35.0% | |
!! | GTTGATAATTTCCAGGCTAA+TGG | - | chr7_2:55267047-55267066 | Msa1063380:intron | 35.0% |
GCATTCATCTCATTATTAGC+TGG | - | chr7_2:55267080-55267099 | Msa1063380:intron | 35.0% | |
TAGCTGGAGAAAATGAATTC+AGG | - | chr7_2:55267096-55267115 | Msa1063380:intron | 35.0% | |
GAGATAACAGTGTAAACTAC+TGG | - | chr7_2:55267142-55267161 | Msa1063380:intron | 35.0% | |
! | GTGTAAACTACTGGTTAAGA+TGG | - | chr7_2:55267151-55267170 | Msa1063380:intron | 35.0% |
GGATAAAAGAAAAGGCTGAA+CGG | - | chr7_2:55267172-55267191 | Msa1063380:intron | 35.0% | |
ATGTTCCAAATGACCGAAAT+TGG | + | chr7_2:55267487-55267506 | None:intergenic | 35.0% | |
CAGATAAGTCACAAAGTGAT+AGG | - | chr7_2:55267845-55267864 | Msa1063380:intron | 35.0% | |
GATAGGGAGAAATTGTTTCA+AGG | - | chr7_2:55267862-55267881 | Msa1063380:intron | 35.0% | |
! | CTAATGATGATGTAAAGCCA+AGG | - | chr7_2:55267890-55267909 | Msa1063380:intron | 35.0% |
CAGAACACCTGAAGAAATTA+TGG | - | chr7_2:55267915-55267934 | Msa1063380:intron | 35.0% | |
TAAGCAGCCATAATTTCTTC+AGG | + | chr7_2:55267925-55267944 | None:intergenic | 35.0% | |
! | AAGCTTGTTTCTTGTTTGAG+AGG | + | chr7_2:55268068-55268087 | None:intergenic | 35.0% |
ATGAGTCATGGTATTCTAGA+AGG | - | chr7_2:55268316-55268335 | Msa1063380:intron | 35.0% | |
GATCCATTATGATGAGTCAT+TGG | - | chr7_2:55268348-55268367 | Msa1063380:intron | 35.0% | |
GATGTTCATCACCTATCAAT+TGG | - | chr7_2:55268505-55268524 | Msa1063380:CDS | 35.0% | |
!! | CAATGAAAGCACCAATTGAT+AGG | + | chr7_2:55268519-55268538 | None:intergenic | 35.0% |
GATCCATTATGATGAGTCAT+TGG | + | chr7_2:55268348-55268367 | None:intergenic | 35.0% | |
CATGGTATTCTATAAGGATC+TGG | + | chr7_2:55268718-55268737 | None:intergenic | 35.0% | |
CTACAATCAAAGAGGGAATA+AGG | - | chr7_2:55268831-55268850 | Msa1063380:intron | 35.0% | |
AAACAAACAATAGCCAAGAC+TGG | + | chr7_2:55269016-55269035 | None:intergenic | 35.0% | |
GTCGTTACCATGATTCTAAA+TGG | - | chr7_2:55269105-55269124 | Msa1063380:intron | 35.0% | |
! | AATTTTCAGCTCCATTTTGC+AGG | + | chr7_2:55269190-55269209 | None:intergenic | 35.0% |
! | GAGGAAATCTTGATAATTCG+GGG | + | chr7_2:55269376-55269395 | None:intergenic | 35.0% |
! | GGAGGAAATCTTGATAATTC+GGG | + | chr7_2:55269377-55269396 | None:intergenic | 35.0% |
! | GGGAGGAAATCTTGATAATT+CGG | + | chr7_2:55269378-55269397 | None:intergenic | 35.0% |
!! | ATTGATGATGATGTTGGCGT+AGG | + | chr7_2:55259796-55259815 | None:intergenic | 40.0% |
ATTGTCCGTTATTAGGCAGA+CGG | - | chr7_2:55260493-55260512 | Msa1063380:intron | 40.0% | |
! | TGCATGTCGTAATAGGTTGA+TGG | - | chr7_2:55260617-55260636 | Msa1063380:intron | 40.0% |
GATGGAAGACTTAAGGTGAT+TGG | - | chr7_2:55260677-55260696 | Msa1063380:intron | 40.0% | |
ATTGGCGGTGATAACATTGA+AGG | - | chr7_2:55260695-55260714 | Msa1063380:intron | 40.0% | |
CGTACCTCCAAGTATTTGTA+AGG | + | chr7_2:55260746-55260765 | None:intergenic | 40.0% | |
! | TACAAATACTTGGAGGTACG+TGG | - | chr7_2:55260746-55260765 | Msa1063380:intron | 40.0% |
TTGCAGTTCCTACAAAACCA+GGG | - | chr7_2:55260923-55260942 | Msa1063380:intron | 40.0% | |
AGACTCCAACTAAATATCCC+TGG | + | chr7_2:55260943-55260962 | None:intergenic | 40.0% | |
AAGGGGAAATGAGACAGAAA+AGG | + | chr7_2:55260994-55261013 | None:intergenic | 40.0% | |
! | TCCTTTTTCTTTGGCAGGTT+TGG | - | chr7_2:55261178-55261197 | Msa1063380:intron | 40.0% |
TCCAAACCTGCCAAAGAAAA+AGG | + | chr7_2:55261182-55261201 | None:intergenic | 40.0% | |
TGTGATAAAGTTTGATGCCG+AGG | - | chr7_2:55261435-55261454 | Msa1063380:CDS | 40.0% | |
ATAAAGTTTGATGCCGAGGA+AGG | - | chr7_2:55261439-55261458 | Msa1063380:CDS | 40.0% | |
CTTCAAAAGTTGTCCTTCCT+CGG | + | chr7_2:55261455-55261474 | None:intergenic | 40.0% | |
! | ATCTCGTCAATCTTTTGCGT+TGG | - | chr7_2:55261584-55261603 | Msa1063380:intron | 40.0% |
GTGTTGTCAATTGCAGATCA+TGG | + | chr7_2:55261684-55261703 | None:intergenic | 40.0% | |
ATGTGTATTGCATTGGGTCT+CGG | + | chr7_2:55261721-55261740 | None:intergenic | 40.0% | |
! | TCCTTTTGATAGAAACTGCC+GGG | - | chr7_2:55261846-55261865 | Msa1063380:intron | 40.0% |
! | AACCTTATTCTTCTGGGAAC+AGG | - | chr7_2:55261912-55261931 | Msa1063380:CDS | 40.0% |
! | GTGTGTGTAATTTGTCTGCA+TGG | - | chr7_2:55262190-55262209 | Msa1063380:intron | 40.0% |
ATGATTTAAACTGTGCCACG+TGG | - | chr7_2:55262339-55262358 | Msa1063380:intron | 40.0% | |
GCTCGAATCAGTATTACAGA+GGG | + | chr7_2:55262416-55262435 | None:intergenic | 40.0% | |
GATTCGAGCCTTCTGATATT+TGG | - | chr7_2:55262427-55262446 | Msa1063380:intron | 40.0% | |
GAGCCTTCTGATATTTGGAA+TGG | - | chr7_2:55262432-55262451 | Msa1063380:intron | 40.0% | |
! | TGATATTTGGAATGGGCGAT+TGG | - | chr7_2:55262440-55262459 | Msa1063380:intron | 40.0% |
!! | CGTTGTTATCTCTTTTGGGT+GGG | + | chr7_2:55262505-55262524 | None:intergenic | 40.0% |
! | TCGTTGTTATCTCTTTTGGG+TGG | + | chr7_2:55262506-55262525 | None:intergenic | 40.0% |
GAACCCCCAAATTGAAAAAG+AGG | - | chr7_2:55262564-55262583 | Msa1063380:intron | 40.0% | |
CCCAGCAAATAGATTATGCT+AGG | - | chr7_2:55262653-55262672 | Msa1063380:CDS | 40.0% | |
! | TTTCCCTCTTTTTGGACCAT+CGG | + | chr7_2:55262805-55262824 | None:intergenic | 40.0% |
ACTTTATCGTGAGAAAGTCG+GGG | + | chr7_2:55262832-55262851 | None:intergenic | 40.0% | |
CACTTTATCGTGAGAAAGTC+GGG | + | chr7_2:55262833-55262852 | None:intergenic | 40.0% | |
TGCTTCTCGTCAAATGGAAA+CGG | + | chr7_2:55262861-55262880 | None:intergenic | 40.0% | |
CATACATGCTTCTCGTCAAA+TGG | + | chr7_2:55262867-55262886 | None:intergenic | 40.0% | |
GAAGCCGTGTAAAGAAATCT+TGG | - | chr7_2:55262976-55262995 | Msa1063380:CDS | 40.0% | |
AGAACATACATGCTTCCCTA+CGG | + | chr7_2:55263068-55263087 | None:intergenic | 40.0% | |
GAAGCATGTATGTTCTGTCA+TGG | - | chr7_2:55262875-55262894 | Msa1063380:CDS | 40.0% | |
!! | AGGATGGACTGCTAATTCTT+TGG | - | chr7_2:55263358-55263377 | Msa1063380:intron | 40.0% |
!! | GGATGGACTGCTAATTCTTT+GGG | - | chr7_2:55263359-55263378 | Msa1063380:intron | 40.0% |
GCTAAAATTGTGTTCCTTGG+TGG | - | chr7_2:55263393-55263412 | Msa1063380:CDS | 40.0% | |
AAAATTGTGTTCCTTGGTGG+TGG | - | chr7_2:55263396-55263415 | Msa1063380:CDS | 40.0% | |
TGAAACAAACGCCAATCTTC+CGG | - | chr7_2:55263458-55263477 | Msa1063380:CDS | 40.0% | |
TAAGTATCCAACAGCGAGAA+TGG | + | chr7_2:55263553-55263572 | None:intergenic | 40.0% | |
CAATGCAGAAAGAAGAATCC+CGG | - | chr7_2:55263668-55263687 | Msa1063380:intron | 40.0% | |
ACCATTGTAAGACAATGACC+GGG | + | chr7_2:55263689-55263708 | None:intergenic | 40.0% | |
GACCATTGTAAGACAATGAC+CGG | + | chr7_2:55263690-55263709 | None:intergenic | 40.0% | |
ACTGGTCAGTTGTTTGTGTA+TGG | - | chr7_2:55263738-55263757 | Msa1063380:CDS | 40.0% | |
GGAGAGACACGTTAAAGTTT+AGG | + | chr7_2:55263947-55263966 | None:intergenic | 40.0% | |
TTAACGTGTCTCTCCTTTAC+AGG | - | chr7_2:55263952-55263971 | Msa1063380:intron | 40.0% | |
TAACTCTTGAATGGTCATCG+GGG | - | chr7_2:55263978-55263997 | Msa1063380:intron | 40.0% | |
!! | CGAAAGTGCCATTAAGTGTA+AGG | + | chr7_2:55264036-55264055 | None:intergenic | 40.0% |
!! | CTTTTTGTACTGACAAACCC+TGG | - | chr7_2:55264112-55264131 | Msa1063380:CDS | 40.0% |
TTCATCGAAAACTCTAGCTG+AGG | - | chr7_2:55264291-55264310 | Msa1063380:CDS | 40.0% | |
TCAGTACTTTCTGCTAAACC+TGG | - | chr7_2:55264330-55264349 | Msa1063380:intron | 40.0% | |
!!! | TGAGCTAGTTTTCAGAACTG+CGG | + | chr7_2:55264411-55264430 | None:intergenic | 40.0% |
TTTGAACAAGAAGCTGAACC+AGG | + | chr7_2:55264437-55264456 | None:intergenic | 40.0% | |
TGTTCAAATTGGCCCTTAAC+TGG | - | chr7_2:55264449-55264468 | Msa1063380:intron | 40.0% | |
GTTCAAATTGGCCCTTAACT+GGG | - | chr7_2:55264450-55264469 | Msa1063380:intron | 40.0% | |
TTCAAATTGGCCCTTAACTG+GGG | - | chr7_2:55264451-55264470 | Msa1063380:intron | 40.0% | |
AATTCCAGCACCTTTAACCA+TGG | + | chr7_2:55264495-55264514 | None:intergenic | 40.0% | |
CATTAACCTGCAAAACACAC+AGG | + | chr7_2:55264834-55264853 | None:intergenic | 40.0% | |
! | CTGTGTGTTTTGCAGGTTAA+TGG | - | chr7_2:55264832-55264851 | Msa1063380:intron | 40.0% |
GCAGGTTAATGGTGTAAAAG+TGG | - | chr7_2:55264843-55264862 | Msa1063380:intron | 40.0% | |
GTTAATGGTGTAAAAGTGGC+AGG | - | chr7_2:55264847-55264866 | Msa1063380:intron | 40.0% | |
CGAACCTACAAAAGTCATCA+CGG | + | chr7_2:55265018-55265037 | None:intergenic | 40.0% | |
GATCTTAAAGACTGCTCTGA+TGG | - | chr7_2:55265045-55265064 | Msa1063380:CDS | 40.0% | |
TCTTCTGTCACCATTGTAGA+AGG | - | chr7_2:55265112-55265131 | Msa1063380:CDS | 40.0% | |
CTTCACATATGGGGGAAAAA+AGG | + | chr7_2:55265253-55265272 | None:intergenic | 40.0% | |
! | AAATGAGGTCCTTTTCCTTG+TGG | + | chr7_2:55265369-55265388 | None:intergenic | 40.0% |
!! | TCTGGAACCAAACTTGCTAT+TGG | - | chr7_2:55265444-55265463 | Msa1063380:CDS | 40.0% |
!!! | TGGATTTTTAAGTGGTCGTG+TGG | - | chr7_2:55265464-55265483 | Msa1063380:CDS | 40.0% |
!!! | GGATTTTTAAGTGGTCGTGT+GGG | - | chr7_2:55265465-55265484 | Msa1063380:CDS | 40.0% |
TGAGGGTGATACTGGTAAAA+CGG | - | chr7_2:55265806-55265825 | Msa1063380:CDS | 40.0% | |
CTTTAAATGTAATGGCCGGT+TGG | + | chr7_2:55265835-55265854 | None:intergenic | 40.0% | |
CAACCGGCCATTACATTTAA+AGG | - | chr7_2:55265833-55265852 | Msa1063380:CDS | 40.0% | |
! | GCACTGACACTACAGATTAA+AGG | - | chr7_2:55265968-55265987 | Msa1063380:intron | 40.0% |
!! | TGAGGCATTGACACAAACAT+TGG | + | chr7_2:55266101-55266120 | None:intergenic | 40.0% |
AGATGATAGCATCACAACCT+CGG | - | chr7_2:55266147-55266166 | Msa1063380:intron | 40.0% | |
! | CTTGTCATTTGATACTTCCG+AGG | + | chr7_2:55266167-55266186 | None:intergenic | 40.0% |
GTTTCAGCAGTACTCTTCAA+GGG | + | chr7_2:55266202-55266221 | None:intergenic | 40.0% | |
AGTTTCAGCAGTACTCTTCA+AGG | + | chr7_2:55266203-55266222 | None:intergenic | 40.0% | |
!! | GTCCACAAAAGCATTGATAC+AGG | - | chr7_2:55266369-55266388 | Msa1063380:intron | 40.0% |
! | GACCTGTATCAATGCTTTTG+TGG | + | chr7_2:55266374-55266393 | None:intergenic | 40.0% |
! | TTTACCAGATTTGGAACTGG+TGG | - | chr7_2:55266868-55266887 | Msa1063380:intron | 40.0% |
ACCATGTGTTCCGATGATTA+TGG | - | chr7_2:55266947-55266966 | Msa1063380:intron | 40.0% | |
TCCATAATCATCGGAACACA+TGG | + | chr7_2:55266951-55266970 | None:intergenic | 40.0% | |
TGATTATGGACAGATTGTGC+TGG | - | chr7_2:55266961-55266980 | Msa1063380:intron | 40.0% | |
ATTCTAGGCGGTATTGTCAA+AGG | - | chr7_2:55267411-55267430 | Msa1063380:intron | 40.0% | |
TTCTAGGCGGTATTGTCAAA+GGG | - | chr7_2:55267412-55267431 | Msa1063380:intron | 40.0% | |
GGTATTGTCAAAGGGTTGAA+AGG | - | chr7_2:55267420-55267439 | Msa1063380:intron | 40.0% | |
ATTGTCAAAGGGTTGAAAGG+AGG | - | chr7_2:55267423-55267442 | Msa1063380:intron | 40.0% | |
! | TTTTGTCAGTTCTGCATGAG+AGG | + | chr7_2:55267454-55267473 | None:intergenic | 40.0% |
AAATGACCGAAATTGGAGGT+TGG | + | chr7_2:55267480-55267499 | None:intergenic | 40.0% | |
AACCTCCAATTTCGGTCATT+TGG | - | chr7_2:55267479-55267498 | Msa1063380:intron | 40.0% | |
TTCCAAATGACCGAAATTGG+AGG | + | chr7_2:55267484-55267503 | None:intergenic | 40.0% | |
GGAAGTGAATCTGACAAAGA+GGG | + | chr7_2:55267522-55267541 | None:intergenic | 40.0% | |
TGGAAGTGAATCTGACAAAG+AGG | + | chr7_2:55267523-55267542 | None:intergenic | 40.0% | |
! | AAGCTCCACTTCCTTTTCAT+CGG | + | chr7_2:55267562-55267581 | None:intergenic | 40.0% |
AAGGAAGTGGAGCTTGATAT+AGG | - | chr7_2:55267567-55267586 | Msa1063380:intron | 40.0% | |
GAAGTAGAAGCTGTAGTTTG+AGG | + | chr7_2:55267727-55267746 | None:intergenic | 40.0% | |
GTGACTTATCTGCAAGCAAA+AGG | + | chr7_2:55267837-55267856 | None:intergenic | 40.0% | |
AGGGAGAAATTGTTTCAAGG+CGG | - | chr7_2:55267865-55267884 | Msa1063380:intron | 40.0% | |
ATGGCTGCTTACAGAAAAAC+TGG | - | chr7_2:55267934-55267953 | Msa1063380:CDS | 40.0% | |
TGGCTGCTTACAGAAAAACT+GGG | - | chr7_2:55267935-55267954 | Msa1063380:CDS | 40.0% | |
! | GTTTCTTGTTTGAGAGGCAA+CGG | + | chr7_2:55268062-55268081 | None:intergenic | 40.0% |
CAAGAAACAAGCTTATGGAG+AGG | - | chr7_2:55268074-55268093 | Msa1063380:intron | 40.0% | |
TATGGAGAGGCAGGAAAAAT+TGG | - | chr7_2:55268087-55268106 | Msa1063380:intron | 40.0% | |
! | CAATTGGTGCTTTCATTGAG+AGG | - | chr7_2:55268521-55268540 | Msa1063380:intron | 40.0% |
AGACTGGTGGAAGAACTTAT+TGG | + | chr7_2:55269000-55269019 | None:intergenic | 40.0% | |
ATAAGTTCTTCCACCAGTCT+TGG | - | chr7_2:55269000-55269019 | Msa1063380:intron | 40.0% | |
!! | AAACGAGCTTGTTAAGACCA+TGG | - | chr7_2:55269223-55269242 | Msa1063380:CDS | 40.0% |
!! | AGCTTGTTAAGACCATGGAA+AGG | - | chr7_2:55269228-55269247 | Msa1063380:CDS | 40.0% |
TTGTTAAGACCATGGAAAGG+AGG | - | chr7_2:55269231-55269250 | Msa1063380:intron | 40.0% | |
AGACAATGCTACAAAAAGGG+AGG | + | chr7_2:55269395-55269414 | None:intergenic | 40.0% | |
GCGAGAACTGAAGAAGAAGA+TGG | + | chr7_2:55260031-55260050 | None:intergenic | 45.0% | |
! | GGCAGACGGTTTTTAATGAC+AGG | - | chr7_2:55260507-55260526 | Msa1063380:intron | 45.0% |
GCTTAGTTTAATGGCAGGGA+TGG | - | chr7_2:55260659-55260678 | Msa1063380:intron | 45.0% | |
GGAAGACTTAAGGTGATTGG+CGG | - | chr7_2:55260680-55260699 | Msa1063380:intron | 45.0% | |
CTTGCAGTTCCTACAAAACC+AGG | - | chr7_2:55260922-55260941 | Msa1063380:intron | 45.0% | |
!!! | ACCGCTTTTTCTGTCATCAG+CGG | - | chr7_2:55261252-55261271 | Msa1063380:CDS | 45.0% |
AGTTATGTCGGTGATGAGCA+TGG | - | chr7_2:55261403-55261422 | Msa1063380:intron | 45.0% | |
ACCCGGCAGTTTCTATCAAA+AGG | + | chr7_2:55261850-55261869 | None:intergenic | 45.0% | |
TGCCTGTTCCCAGAAGAATA+AGG | + | chr7_2:55261917-55261936 | None:intergenic | 45.0% | |
TGAAATTGCCGAGCCAACTT+CGG | - | chr7_2:55262157-55262176 | Msa1063380:intron | 45.0% | |
CCATGACTTTCCCGCAATAA+AGG | + | chr7_2:55262282-55262301 | None:intergenic | 45.0% | |
CCTTTATTGCGGGAAAGTCA+TGG | - | chr7_2:55262279-55262298 | Msa1063380:CDS | 45.0% | |
GGCTCGAATCAGTATTACAG+AGG | + | chr7_2:55262417-55262436 | None:intergenic | 45.0% | |
CGCCCATTCCAAATATCAGA+AGG | + | chr7_2:55262438-55262457 | None:intergenic | 45.0% | |
AAAGAGGAACTCGGTCAGAA+CGG | - | chr7_2:55262580-55262599 | Msa1063380:intron | 45.0% | |
ACAACATGCCCATAGAACGT+CGG | - | chr7_2:55262613-55262632 | Msa1063380:CDS | 45.0% | |
CTTTACTGCCGACGTTCTAT+GGG | + | chr7_2:55262624-55262643 | None:intergenic | 45.0% | |
GATCCGATGGTCCAAAAAGA+GGG | - | chr7_2:55262799-55262818 | Msa1063380:intron | 45.0% | |
! | GGGGTAACTTTCCCTCTTTT+TGG | + | chr7_2:55262813-55262832 | None:intergenic | 45.0% |
CTTTGTTGGGCATCTTCTGA+TGG | - | chr7_2:55263525-55263544 | Msa1063380:CDS | 45.0% | |
CTCGCTGTTGGATACTTAGA+TGG | - | chr7_2:55263555-55263574 | Msa1063380:CDS | 45.0% | |
CAGACGACAAGTTCCAAAAC+AGG | + | chr7_2:55263587-55263606 | None:intergenic | 45.0% | |
!! | GTGGTTTGTTGGCCTTTAGA+AGG | + | chr7_2:55263615-55263634 | None:intergenic | 45.0% |
CGGGATTCTTCTTTCTGCAT+TGG | + | chr7_2:55263670-55263689 | None:intergenic | 45.0% | |
TCCCGGTCATTGTCTTACAA+TGG | - | chr7_2:55263685-55263704 | Msa1063380:intron | 45.0% | |
GGTCAGTTGTTTGTGTATGG+TGG | - | chr7_2:55263741-55263760 | Msa1063380:CDS | 45.0% | |
! | GTGTATGGTGGTGACGAAAT+TGG | - | chr7_2:55263753-55263772 | Msa1063380:CDS | 45.0% |
! | TGGTGGTGACGAAATTGGAT+CGG | - | chr7_2:55263758-55263777 | Msa1063380:CDS | 45.0% |
CGTGCAGACCTTACACTTAA+TGG | - | chr7_2:55264025-55264044 | Msa1063380:intron | 45.0% | |
TACTGCCAAGTATAGGAGCA+AGG | - | chr7_2:55264068-55264087 | Msa1063380:intron | 45.0% | |
ACTGCCAAGTATAGGAGCAA+GGG | - | chr7_2:55264069-55264088 | Msa1063380:intron | 45.0% | |
AAACCCCTTGCTCCTATACT+TGG | + | chr7_2:55264076-55264095 | None:intergenic | 45.0% | |
CTGAAAACTAGCTCAACACC+TGG | - | chr7_2:55264416-55264435 | Msa1063380:intron | 45.0% | |
TCAAATTGGCCCTTAACTGG+GGG | - | chr7_2:55264452-55264471 | Msa1063380:intron | 45.0% | |
TTAACCATGGACAAGTGGCT+GGG | + | chr7_2:55264482-55264501 | None:intergenic | 45.0% | |
TTTAACCATGGACAAGTGGC+TGG | + | chr7_2:55264483-55264502 | None:intergenic | 45.0% | |
AGCCACTTGTCCATGGTTAA+AGG | - | chr7_2:55264482-55264501 | Msa1063380:intron | 45.0% | |
CACCTTTAACCATGGACAAG+TGG | + | chr7_2:55264487-55264506 | None:intergenic | 45.0% | |
! | TTGTCCATGGTTAAAGGTGC+TGG | - | chr7_2:55264488-55264507 | Msa1063380:intron | 45.0% |
GATGTGTGGCATCACACAAA+AGG | + | chr7_2:55264556-55264575 | None:intergenic | 45.0% | |
TTGTTCTGCTTCCTTGCTTC+TGG | - | chr7_2:55264900-55264919 | Msa1063380:CDS | 45.0% | |
TACAAAAGTCATCACGGCCA+AGG | + | chr7_2:55265012-55265031 | None:intergenic | 45.0% | |
! | TTGGCCGTGATGACTTTTGT+AGG | - | chr7_2:55265011-55265030 | Msa1063380:CDS | 45.0% |
AACGCATGCTTCACATATGG+GGG | + | chr7_2:55265261-55265280 | None:intergenic | 45.0% | |
CAACGCATGCTTCACATATG+GGG | + | chr7_2:55265262-55265281 | None:intergenic | 45.0% | |
GCAACGCATGCTTCACATAT+GGG | + | chr7_2:55265263-55265282 | None:intergenic | 45.0% | |
TGCAACGCATGCTTCACATA+TGG | + | chr7_2:55265264-55265283 | None:intergenic | 45.0% | |
GTAATTGGTGAGCTTGAGCT+AGG | + | chr7_2:55265654-55265673 | None:intergenic | 45.0% | |
!! | GAAGGTGTTTCTGGTTTCCT+TGG | + | chr7_2:55265726-55265745 | None:intergenic | 45.0% |
AGGAAACCAGAAACACCTTC+AGG | - | chr7_2:55265726-55265745 | Msa1063380:CDS | 45.0% | |
!! | GAGTTTCCTGAAGGTGTTTC+TGG | + | chr7_2:55265735-55265754 | None:intergenic | 45.0% |
ACCTTCAGGAAACTCTCATG+AGG | - | chr7_2:55265740-55265759 | Msa1063380:CDS | 45.0% | |
TCCTCATGAGAGTTTCCTGA+AGG | + | chr7_2:55265744-55265763 | None:intergenic | 45.0% | |
AGTGTAGTTGAGGGTGATAC+TGG | - | chr7_2:55265798-55265817 | Msa1063380:CDS | 45.0% | |
!! | GGATTCAGTTTTATCGCACC+TGG | - | chr7_2:55265917-55265936 | Msa1063380:intron | 45.0% |
TATCGCACCTGGCATATCAT+TGG | - | chr7_2:55265928-55265947 | Msa1063380:intron | 45.0% | |
TGACATTGACACATCGACAC+TGG | + | chr7_2:55266069-55266088 | None:intergenic | 45.0% | |
!! | AGTGTCGATGTGTCAATGTC+AGG | - | chr7_2:55266068-55266087 | Msa1063380:intron | 45.0% |
! | GTGTCGATGTGTCAATGTCA+GGG | - | chr7_2:55266069-55266088 | Msa1063380:intron | 45.0% |
GAGGTTGTGATGCTATCATC+TGG | + | chr7_2:55266148-55266167 | None:intergenic | 45.0% | |
ATCAAATGACAAGCAGCACG+AGG | - | chr7_2:55266174-55266193 | Msa1063380:intron | 45.0% | |
TTTCTTGCACAGGCTCTTCA+GGG | + | chr7_2:55266228-55266247 | None:intergenic | 45.0% | |
TCTTCAGAAACCACACACTC+TGG | - | chr7_2:55266289-55266308 | Msa1063380:intron | 45.0% | |
CTTCAGAAACCACACACTCT+GGG | - | chr7_2:55266290-55266309 | Msa1063380:intron | 45.0% | |
TTCAGAAACCACACACTCTG+GGG | - | chr7_2:55266291-55266310 | Msa1063380:intron | 45.0% | |
! | ACACTCTGGGGATATCCATT+TGG | - | chr7_2:55266303-55266322 | Msa1063380:intron | 45.0% |
CCAATTCAGAACCATTAGCC+TGG | + | chr7_2:55267061-55267080 | None:intergenic | 45.0% | |
!! | CCAGGCTAATGGTTCTGAAT+TGG | - | chr7_2:55267058-55267077 | Msa1063380:intron | 45.0% |
AGAACGTTGTCGTGAAGACA+AGG | + | chr7_2:55267234-55267253 | None:intergenic | 45.0% | |
GTCAGATTCACTTCCAACAG+TGG | - | chr7_2:55267527-55267546 | Msa1063380:intron | 45.0% | |
ACTTCCAACAGTGGTAGTAG+TGG | - | chr7_2:55267536-55267555 | Msa1063380:intron | 45.0% | |
GGCTGCTTACAGAAAAACTG+GGG | - | chr7_2:55267936-55267955 | Msa1063380:CDS | 45.0% | |
AAACAAGCTTATGGAGAGGC+AGG | - | chr7_2:55268078-55268097 | Msa1063380:intron | 45.0% | |
!! | ATGATGCACTAAGGAGTGTC+TGG | - | chr7_2:55268229-55268248 | Msa1063380:CDS | 45.0% |
CAAACAATAGCCAAGACTGG+TGG | + | chr7_2:55269013-55269032 | None:intergenic | 45.0% | |
AGACCATGGAAAGGAGGAAA+TGG | - | chr7_2:55269237-55269256 | Msa1063380:intron | 45.0% | |
CAGCACAAGTTTCAGCAGCA+AGG | - | chr7_2:55259953-55259972 | Msa1063380:CDS | 50.0% | |
TGGCAGGGATGGAAGACTTA+AGG | - | chr7_2:55260670-55260689 | Msa1063380:intron | 50.0% | |
GCCGCTGATGACAGAAAAAG+CGG | + | chr7_2:55261256-55261275 | None:intergenic | 50.0% | |
GATAGAAACTGCCGGGTTTC+CGG | - | chr7_2:55261853-55261872 | Msa1063380:intron | 50.0% | |
TCCAGCGACCAACCAATTGT+TGG | - | chr7_2:55261878-55261897 | Msa1063380:intron | 50.0% | |
! | TCCAACAATTGGTTGGTCGC+TGG | + | chr7_2:55261882-55261901 | None:intergenic | 50.0% |
GTTGAGTTCCGAAGTTGGCT+CGG | + | chr7_2:55262168-55262187 | None:intergenic | 50.0% | |
CACTCGTTGAGTTCCGAAGT+TGG | + | chr7_2:55262173-55262192 | None:intergenic | 50.0% | |
ATCGCCTCCTGCCTTTATTG+CGG | - | chr7_2:55262268-55262287 | Msa1063380:CDS | 50.0% | |
TTTCCCGCAATAAAGGCAGG+AGG | + | chr7_2:55262275-55262294 | None:intergenic | 50.0% | |
GACTTTCCCGCAATAAAGGC+AGG | + | chr7_2:55262278-55262297 | None:intergenic | 50.0% | |
ATTGCGGGAAAGTCATGGTG+CGG | - | chr7_2:55262284-55262303 | Msa1063380:CDS | 50.0% | |
GCTTTACTGCCGACGTTCTA+TGG | + | chr7_2:55262625-55262644 | None:intergenic | 50.0% | |
AGAACGTCGGCAGTAAAGCA+CGG | - | chr7_2:55262626-55262645 | Msa1063380:CDS | 50.0% | |
CGATCCGATGGTCCAAAAAG+AGG | - | chr7_2:55262798-55262817 | Msa1063380:intron | 50.0% | |
!! | TGTGTTCCTTGGTGGTGGAA+AGG | - | chr7_2:55263401-55263420 | Msa1063380:CDS | 50.0% |
TCGTCTGCAGCACCTTCTAA+AGG | - | chr7_2:55263600-55263619 | Msa1063380:intron | 50.0% | |
TCTTGAATGGTCATCGGGGA+TGG | - | chr7_2:55263982-55264001 | Msa1063380:intron | 50.0% | |
CTGCCAAGTATAGGAGCAAG+GGG | - | chr7_2:55264070-55264089 | Msa1063380:intron | 50.0% | |
AAACTCCTGCGCAGATACAG+AGG | + | chr7_2:55264200-55264219 | None:intergenic | 50.0% | |
TTCAGAACTGCGGCTACCTA+AGG | + | chr7_2:55264401-55264420 | None:intergenic | 50.0% | |
!! | CTTTTCCTTGTGGAGCGTCA+TGG | + | chr7_2:55265359-55265378 | None:intergenic | 50.0% |
CATGACGCTCCACAAGGAAA+AGG | - | chr7_2:55265357-55265376 | Msa1063380:intron | 50.0% | |
TCATATCGCAGACTCCAACC+TGG | + | chr7_2:55265596-55265615 | None:intergenic | 50.0% | |
CTGGTAAAACGGTCTCCAAC+CGG | - | chr7_2:55265817-55265836 | Msa1063380:CDS | 50.0% | |
CTTTCTTGCACAGGCTCTTC+AGG | + | chr7_2:55266229-55266248 | None:intergenic | 50.0% | |
! | GTTGAGCTGCTTTCTTGCAC+AGG | + | chr7_2:55266238-55266257 | None:intergenic | 50.0% |
GCAAGAAAGCAGCTCAACTG+TGG | - | chr7_2:55266240-55266259 | Msa1063380:intron | 50.0% | |
ATGGATATCCCCAGAGTGTG+TGG | + | chr7_2:55266302-55266321 | None:intergenic | 50.0% | |
GCAGGACAAGTGGATCCAAA+TGG | + | chr7_2:55266321-55266340 | None:intergenic | 50.0% | |
TCACAGCAAAGCAGGACAAG+TGG | + | chr7_2:55266331-55266350 | None:intergenic | 50.0% | |
! | ACCAGATTTGGAACTGGTGG+CGG | - | chr7_2:55266871-55266890 | Msa1063380:intron | 50.0% |
TGAAAATGCGGCATCAGCAG+CGG | + | chr7_2:55267262-55267281 | None:intergenic | 50.0% | |
ACAATACCGCCTAGAATCGC+TGG | + | chr7_2:55267408-55267427 | None:intergenic | 50.0% | |
GGTAGTAGTGGCCGATGAAA+AGG | - | chr7_2:55267548-55267567 | Msa1063380:intron | 50.0% | |
AGTGGCCGATGAAAAGGAAG+TGG | - | chr7_2:55267554-55267573 | Msa1063380:intron | 50.0% | |
TCTTCAGGTGTTCTGACCCT+TGG | + | chr7_2:55267910-55267929 | None:intergenic | 50.0% | |
GGAGAGGCAGGAAAAATTGG+AGG | - | chr7_2:55268090-55268109 | Msa1063380:intron | 50.0% | |
TCAGAGAATAAGCCAGCGCA+CGG | - | chr7_2:55269160-55269179 | Msa1063380:CDS | 50.0% | |
CCACCATTTCCTCCTTTCCA+TGG | + | chr7_2:55269243-55269262 | None:intergenic | 50.0% | |
CCATGGAAAGGAGGAAATGG+TGG | - | chr7_2:55269240-55269259 | Msa1063380:intron | 50.0% | |
TAAGGCGCGTGCGTTCTGTT+AGG | - | chr7_2:55260449-55260468 | Msa1063380:intron | 55.0% | |
! | ATTGGTTGGTCGCTGGACTC+CGG | + | chr7_2:55261875-55261894 | None:intergenic | 55.0% |
TCGCCTCCTGCCTTTATTGC+GGG | - | chr7_2:55262269-55262288 | Msa1063380:CDS | 55.0% | |
GGAGATCCTTTCCACCACCA+AGG | + | chr7_2:55263410-55263429 | None:intergenic | 55.0% | |
GATGGCTCCATTCTCGCTGT+TGG | - | chr7_2:55263543-55263562 | Msa1063380:CDS | 55.0% | |
GACATCCTCTGTATCTGCGC+AGG | - | chr7_2:55264192-55264211 | Msa1063380:intron | 55.0% | |
CTGGGAACACCCCCAGTTAA+GGG | + | chr7_2:55264464-55264483 | None:intergenic | 55.0% | |
TGTTCCCAGCCACTTGTCCA+TGG | - | chr7_2:55264475-55264494 | Msa1063380:intron | 55.0% | |
! | TGCTTCCTTGCTTCTGGCTG+TGG | - | chr7_2:55264906-55264925 | Msa1063380:CDS | 55.0% |
! | GCTTCCTTGCTTCTGGCTGT+GGG | - | chr7_2:55264907-55264926 | Msa1063380:CDS | 55.0% |
ATTGCCCACAGCCAGAAGCA+AGG | + | chr7_2:55264914-55264933 | None:intergenic | 55.0% | |
CTGGCTGTGGGCAATGAATG+TGG | - | chr7_2:55264919-55264938 | Msa1063380:CDS | 55.0% | |
TCCGCCACCAGTTCCAAATC+TGG | + | chr7_2:55266875-55266894 | None:intergenic | 55.0% | |
ACGACTGTGCCAGCGATTCT+AGG | - | chr7_2:55267396-55267415 | Msa1063380:intron | 55.0% | |
ACTGTGCCAGCGATTCTAGG+CGG | - | chr7_2:55267399-55267418 | Msa1063380:intron | 55.0% | |
TCGGCCACTACTACCACTGT+TGG | + | chr7_2:55267543-55267562 | None:intergenic | 55.0% | |
GAGGAACTCGGTCAGAACGG+CGG | - | chr7_2:55262583-55262602 | Msa1063380:intron | 60.0% | |
GCTGGGAACACCCCCAGTTA+AGG | + | chr7_2:55264465-55264484 | None:intergenic | 60.0% | |
GCAGTCCATGACGCTCCACA+AGG | - | chr7_2:55265351-55265370 | Msa1063380:intron | 60.0% | |
CGCACGGCAGACCTGCAAAA+TGG | - | chr7_2:55269176-55269195 | Msa1063380:CDS | 60.0% | |
GTCGCTGGACTCCGGAAACC+CGG | + | chr7_2:55261867-55261886 | None:intergenic | 65.0% | |
GAACTCGGTCAGAACGGCGG+TGG | - | chr7_2:55262586-55262605 | Msa1063380:intron | 65.0% | |
TTTGCAGGTCTGCCGTGCGC+TGG | + | chr7_2:55269175-55269194 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 55259680 | 55269524 | 55259680 | ID=Msa1063380;Name=Msa1063380 |
chr7_2 | mRNA | 55259680 | 55269524 | 55259680 | ID=Msa1063380-mRNA-1;Parent=Msa1063380;Name=Msa1063380-mRNA-1;_AED=0.12;_eAED=0.12;_QI=146|0.82|0.79|0.95|1|1|24|253|1028 |
chr7_2 | exon | 55259680 | 55260040 | 55259680 | ID=Msa1063380-mRNA-1:exon:10260;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55261093 | 55261155 | 55261093 | ID=Msa1063380-mRNA-1:exon:10259;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55261247 | 55261356 | 55261247 | ID=Msa1063380-mRNA-1:exon:10258;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55261429 | 55261500 | 55261429 | ID=Msa1063380-mRNA-1:exon:10257;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55261616 | 55261808 | 55261616 | ID=Msa1063380-mRNA-1:exon:10256;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55261896 | 55261989 | 55261896 | ID=Msa1063380-mRNA-1:exon:10255;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55262087 | 55262142 | 55262087 | ID=Msa1063380-mRNA-1:exon:10254;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55262222 | 55262339 | 55262222 | ID=Msa1063380-mRNA-1:exon:10253;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55262605 | 55262729 | 55262605 | ID=Msa1063380-mRNA-1:exon:10252;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55262814 | 55262996 | 55262814 | ID=Msa1063380-mRNA-1:exon:10251;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55263377 | 55263607 | 55263377 | ID=Msa1063380-mRNA-1:exon:10250;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55263722 | 55263849 | 55263722 | ID=Msa1063380-mRNA-1:exon:10249;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55264099 | 55264171 | 55264099 | ID=Msa1063380-mRNA-1:exon:10248;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55264259 | 55264335 | 55264259 | ID=Msa1063380-mRNA-1:exon:10247;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55264701 | 55264800 | 55264701 | ID=Msa1063380-mRNA-1:exon:10246;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55264892 | 55265230 | 55264892 | ID=Msa1063380-mRNA-1:exon:10245;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55265410 | 55265863 | 55265410 | ID=Msa1063380-mRNA-1:exon:10244;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55266899 | 55266944 | 55266899 | ID=Msa1063380-mRNA-1:exon:10243;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55267696 | 55267799 | 55267696 | ID=Msa1063380-mRNA-1:exon:10242;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55267918 | 55268009 | 55267918 | ID=Msa1063380-mRNA-1:exon:10241;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55268222 | 55268275 | 55268222 | ID=Msa1063380-mRNA-1:exon:10240;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55268444 | 55268528 | 55268444 | ID=Msa1063380-mRNA-1:exon:10239;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55269115 | 55269248 | 55269115 | ID=Msa1063380-mRNA-1:exon:10238;Parent=Msa1063380-mRNA-1 |
chr7_2 | exon | 55269331 | 55269524 | 55269331 | ID=Msa1063380-mRNA-1:exon:10237;Parent=Msa1063380-mRNA-1 |
chr7_2 | five_prime_UTR | 55269379 | 55269524 | 55269379 | ID=Msa1063380-mRNA-1:five_prime_utr;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55269331 | 55269378 | 55269331 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55269115 | 55269248 | 55269115 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55268444 | 55268528 | 55268444 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55268222 | 55268275 | 55268222 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55267918 | 55268009 | 55267918 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55267696 | 55267799 | 55267696 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55266899 | 55266944 | 55266899 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55265410 | 55265863 | 55265410 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55264892 | 55265230 | 55264892 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55264701 | 55264800 | 55264701 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55264259 | 55264335 | 55264259 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55264099 | 55264171 | 55264099 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55263722 | 55263849 | 55263722 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55263377 | 55263607 | 55263377 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55262814 | 55262996 | 55262814 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55262605 | 55262729 | 55262605 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55262222 | 55262339 | 55262222 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55262087 | 55262142 | 55262087 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55261896 | 55261989 | 55261896 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55261616 | 55261808 | 55261616 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55261429 | 55261500 | 55261429 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55261247 | 55261356 | 55261247 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55261093 | 55261155 | 55261093 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | CDS | 55259933 | 55260040 | 55259933 | ID=Msa1063380-mRNA-1:cds;Parent=Msa1063380-mRNA-1 |
chr7_2 | three_prime_UTR | 55259680 | 55259932 | 55259680 | ID=Msa1063380-mRNA-1:three_prime_utr;Parent=Msa1063380-mRNA-1 |
Gene Sequence |
Protein sequence |