AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0587310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587310 MtrunA17_Chr1g0176691 84.127 126 20 0 1 126 288 413 7.83e-65 214
Msa0587310 MtrunA17_Chr4g0003291 81.481 135 18 3 158 290 3 132 1.08e-57 194
Msa0587310 MtrunA17_Chr4g0003291 95.349 43 2 0 385 427 319 361 1.47e-17 84.0
Msa0587310 MtrunA17_Chr1g0176661 71.014 138 33 3 1 134 241 375 8.91e-56 189
Msa0587310 MtrunA17_Chr5g0447471 67.200 125 39 2 2 126 235 357 5.85e-47 166
Msa0587310 MtrunA17_Chr1g0176741 64.615 130 38 3 2 131 149 270 4.39e-46 162
Msa0587310 MtrunA17_Chr4g0066421 63.492 126 43 3 1 126 149 271 7.81e-46 160
Msa0587310 MtrunA17_Chr4g0066011 60.305 131 46 4 1 126 242 371 2.80e-41 150
Msa0587310 MtrunA17_Chr4g0061251 63.359 131 36 5 1 125 228 352 4.42e-41 150
Msa0587310 MtrunA17_Chr6g0476271 59.055 127 49 3 1 126 243 367 3.27e-40 148
Msa0587310 MtrunA17_Chr4g0063941 63.717 113 39 2 142 253 22 133 4.96e-37 139
Msa0587310 MtrunA17_Chr4g0068771 52.206 136 61 4 1 133 68 202 2.87e-36 133
Msa0587310 MtrunA17_Chr4g0066021 60.000 115 43 3 12 126 242 353 1.67e-34 132
Msa0587310 MtrunA17_Chr3g0134731 56.818 132 46 4 1 126 246 372 1.81e-34 132
Msa0587310 MtrunA17_Chr8g0350131 58.594 128 48 3 1 126 266 390 1.86e-34 132
Msa0587310 MtrunA17_Chr3g0090301 55.906 127 52 4 1 126 246 369 1.32e-33 130
Msa0587310 MtrunA17_Chr4g0066101 53.846 130 50 3 2 125 248 373 1.35e-33 130
Msa0587310 MtrunA17_Chr4g0062591 56.589 129 51 4 1 126 237 363 1.48e-33 129
Msa0587310 MtrunA17_Chr4g0051031 53.488 129 56 3 1 126 231 358 8.93e-33 127
Msa0587310 MtrunA17_Chr4g0066411 60.952 105 38 3 23 126 18 120 9.70e-33 120
Msa0587310 MtrunA17_Chr5g0429691 58.268 127 49 4 2 126 255 379 1.07e-32 127
Msa0587310 MtrunA17_Chr4g0061241 53.788 132 50 4 1 126 232 358 1.43e-31 124
Msa0587310 MtrunA17_Chr4g0065891 53.125 128 51 4 1 126 1 121 4.39e-31 116
Msa0587310 MtrunA17_Chr8g0350141 50.000 132 62 2 5 135 218 346 6.26e-31 122
Msa0587310 MtrunA17_Chr4g0065051 54.198 131 51 4 1 126 126 252 8.40e-31 119
Msa0587310 MtrunA17_Chr5g0429741 54.135 133 49 6 1 126 243 370 4.21e-30 120
Msa0587310 MtrunA17_Chr3g0090281 52.846 123 47 4 1 118 246 362 6.14e-30 119
Msa0587310 MtrunA17_Chr3g0090291 55.906 127 52 3 1 126 246 369 7.72e-30 119
Msa0587310 MtrunA17_Chr4g0063971 64.835 91 28 2 142 232 22 108 3.19e-29 117
Msa0587310 MtrunA17_Chr4g0065061 50.000 130 60 4 1 126 246 374 6.18e-29 117
Msa0587310 MtrunA17_Chr4g0066431 53.509 114 42 3 1 104 245 357 1.17e-28 115
Msa0587310 MtrunA17_Chr5g0429701 51.163 129 59 4 1 126 252 379 3.83e-28 115
Msa0587310 MtrunA17_Chr6g0475191 51.562 128 55 4 1 126 74 196 7.01e-28 109
Msa0587310 MtrunA17_Chr8g0353991 52.672 131 53 5 2 126 250 377 1.72e-27 113
Msa0587310 MtrunA17_Chr4g0010591 49.606 127 58 4 1 125 154 276 3.31e-26 107
Msa0587310 MtrunA17_Chr4g0066041 55.660 106 44 3 23 126 257 361 4.40e-26 108
Msa0587310 MtrunA17_Chr4g0010541 48.819 127 59 4 1 125 225 347 6.04e-26 108
Msa0587310 MtrunA17_Chr4g0066071 55.660 106 44 3 23 126 257 361 6.75e-26 108
Msa0587310 MtrunA17_Chr8g0389891 48.062 129 59 5 2 126 95 219 1.23e-25 104
Msa0587310 MtrunA17_Chr4g0010621 48.872 133 57 6 1 126 225 353 5.41e-25 105
Msa0587310 MtrunA17_Chr4g0066441 62.195 82 29 2 46 126 1 81 5.88e-25 97.8
Msa0587310 MtrunA17_Chr6g0476211 54.082 98 41 4 146 241 25 120 1.26e-24 99.0
Msa0587310 MtrunA17_Chr6g0476191 52.381 105 46 4 146 248 25 127 1.64e-24 99.8
Msa0587310 MtrunA17_Chr4g0009891 48.438 128 58 5 1 125 226 348 2.70e-24 103
Msa0587310 MtrunA17_Chr4g0010531 44.604 139 59 4 2 125 228 363 3.82e-24 103
Msa0587310 MtrunA17_Chr6g0476221 52.381 105 46 4 146 248 25 127 4.04e-24 98.6
Msa0587310 MtrunA17_Chr5g0406091 57.609 92 29 3 40 126 7 93 5.20e-24 95.9
Msa0587310 MtrunA17_Chr0c19g0493761 44.000 125 66 3 2 126 11 131 9.05e-24 96.7
Msa0587310 MtrunA17_Chr7g0249011 44.000 125 66 3 2 126 11 131 9.05e-24 96.7
Msa0587310 MtrunA17_Chr4g0010611 47.368 133 59 6 1 126 226 354 9.39e-24 102
Msa0587310 MtrunA17_Chr4g0010561 42.958 142 62 6 1 126 268 406 3.58e-23 101
Msa0587310 MtrunA17_Chr4g0010631 45.865 133 61 6 1 126 226 354 5.45e-22 97.1
Msa0587310 MtrunA17_Chr4g0010581 42.446 139 62 4 2 125 228 363 6.38e-21 94.0
Msa0587310 MtrunA17_Chr7g0248951 45.312 128 59 7 5 126 3 125 1.11e-20 87.8
Msa0587310 MtrunA17_Chr4g0066031 53.488 86 30 3 46 126 1 81 5.26e-20 84.3
Msa0587310 MtrunA17_Chr4g0010741 50.549 91 41 2 37 126 244 331 1.88e-18 86.3
Msa0587310 MtrunA17_Chr8g0387361 42.063 126 68 4 2 125 70 192 5.49e-18 82.0
Msa0587310 MtrunA17_Chr5g0393561 64.286 56 19 1 1 55 245 300 5.39e-15 75.5
Msa0587310 MtrunA17_Chr4g0063901 43.137 102 49 4 46 144 1 96 1.72e-14 69.3
Msa0587310 MtrunA17_Chr2g0303601 37.500 128 66 6 2 126 225 341 4.19e-14 73.6
Msa0587310 MtrunA17_Chr1g0176671 62.963 54 18 2 1 54 34 85 1.85e-12 63.2
Msa0587310 MtrunA17_Chr4g0010731 44.000 75 39 2 55 126 6 80 1.45e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587310 AT1G15340.1 63.810 105 37 1 142 246 6 109 8.44e-36 136
Msa0587310 AT3G15790.1 62.617 107 38 2 142 247 6 111 8.18e-35 130
Msa0587310 AT3G15790.3 62.617 107 38 2 142 247 6 111 8.18e-35 130
Msa0587310 AT3G15790.2 62.617 107 38 2 142 247 6 111 8.18e-35 130
Msa0587310 AT1G15340.2 70.000 50 15 0 142 191 6 55 8.32e-18 84.7

Find 129 sgRNAs with CRISPR-Local

Find 751 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTGTTCCTTTCTTCTT+AGG 0.082097 4_2:+8793745 None:intergenic
TATTGTTGCCTTTGATTTAA+TGG 0.091455 4_2:-8800835 Msa0587310:exon
GAATCCTTGTTCTTCCTCTT+TGG 0.168033 4_2:+8792812 None:intergenic
CATTTAAGTTTCTATGGTTT+TGG 0.173175 4_2:-8801077 Msa0587310:five_prime_UTR
GTACTTCTTCAATTGTCTTT+TGG 0.222954 4_2:+8793675 None:intergenic
AATCCTTGTTCTTCCTCTTT+GGG 0.254084 4_2:+8792813 None:intergenic
TGCAGGTGGTGGGGTTGTTT+TGG 0.254402 4_2:+8793561 None:intergenic
GTTGGAACAGATTGCGTTAC+TGG 0.254941 4_2:-8800573 Msa0587310:CDS
TTAGAGGATTTCTAAGTCTA+TGG 0.269614 4_2:-8800740 Msa0587310:CDS
GTTTCACATTTAAGTTTCTA+TGG 0.274492 4_2:-8801083 Msa0587310:five_prime_UTR
TTGATAATGAAAGTGTTATT+TGG 0.275617 4_2:-8792613 Msa0587310:CDS
AGAAAATAGTACAGCTGAAT+TGG 0.281454 4_2:-8792922 Msa0587310:CDS
TTTGTTTAAACGCTTATATA+TGG 0.301351 4_2:-8801151 Msa0587310:five_prime_UTR
GATTCCCAGAATGGTTATTC+AGG 0.307877 4_2:+8793653 None:intergenic
ACGAGTATACGGTTGATATA+TGG 0.318993 4_2:-8800707 Msa0587310:CDS
AAGTACCTGAATAACCATTC+TGG 0.324491 4_2:-8793658 Msa0587310:CDS
AGAAATATCGATGGCGGAAC+CGG 0.325360 4_2:-8793024 Msa0587310:CDS
GCTCAGCTTGTGCAGGTGGT+GGG 0.331053 4_2:+8793551 None:intergenic
AGAGACCAGTTTCTTCCAAT+TGG 0.336664 4_2:+8799846 None:intergenic
ATCGCTTTCGTTGCTCCAAC+TGG 0.337932 4_2:-8793712 Msa0587310:CDS
CTGACATATCAGAGTTTGAT+TGG 0.338629 4_2:-8793630 Msa0587310:CDS
AATGTTGAAGATATCATTAA+TGG 0.339503 4_2:-8792704 Msa0587310:CDS
GGCTCAGCTTGTGCAGGTGG+TGG 0.361451 4_2:+8793550 None:intergenic
TTTGATTTATGGGTATTTAG+AGG 0.361936 4_2:-8800756 Msa0587310:CDS
ACAACTTTCTGTGGAAGCTT+TGG 0.364282 4_2:-8792856 Msa0587310:CDS
AAACTTAAATGTGAAACATT+TGG 0.365820 4_2:+8801089 None:intergenic
ATTTCTAAGTCTATGGGTTA+TGG 0.375932 4_2:-8800733 Msa0587310:CDS
TCAGAGTTTGATTGGGGAAC+CGG 0.377737 4_2:-8793622 Msa0587310:CDS
TATTGCAAAGATTCACGAAA+TGG 0.386661 4_2:-8800504 Msa0587310:CDS
AACTCTCTGCTCCTCCCAAT+TGG 0.389094 4_2:-8799861 Msa0587310:CDS
GGTTATGGTGGACGAGTATA+CGG 0.392883 4_2:-8800718 Msa0587310:CDS
CGAGTATACGGTTGATATAT+GGG 0.394457 4_2:-8800706 Msa0587310:CDS
TCGTGAATCTTTGCAATAGT+TGG 0.395158 4_2:+8800509 None:intergenic
TCCTCCCAATTGGAAGAAAC+TGG 0.397819 4_2:-8799851 Msa0587310:intron
GAACGATAATCAATATCATC+TGG 0.398645 4_2:+8800786 None:intergenic
TTCGGAGGCTCAGCTTGTGC+AGG 0.403009 4_2:+8793544 None:intergenic
GATGAAAAGCAAACAATTCA+AGG 0.406252 4_2:-8792659 Msa0587310:CDS
GCTCTACTTGTTTGTGCCAT+GGG 0.411028 4_2:+8800442 None:intergenic
ATTGAAGACCGCCTCTACTA+AGG 0.411533 4_2:+8800905 None:intergenic
GAGGCAGCCTTACTACAAAA+AGG 0.416722 4_2:+8800942 None:intergenic
AGAAACATCTGTGGCGGAAC+CGG 0.422677 4_2:-8792883 Msa0587310:CDS
AATACAAAGTGCAGTCATCT+TGG 0.424763 4_2:-8800674 Msa0587310:CDS
TTGGTGTTCCTTTCTTCTTA+GGG 0.429693 4_2:+8793746 None:intergenic
GAGACCAGTTTCTTCCAATT+GGG 0.430976 4_2:+8799847 None:intergenic
TGACATATCAGAGTTTGATT+GGG 0.437668 4_2:-8793629 Msa0587310:CDS
CTCAGCTTGTGCAGGTGGTG+GGG 0.439388 4_2:+8793552 None:intergenic
TGCTCTACTTGTTTGTGCCA+TGG 0.439938 4_2:+8800441 None:intergenic
TTCAGAGGAAGCCAAGGAAA+AGG 0.442265 4_2:-8793458 Msa0587310:CDS
CAATGGAGCTATTCACTGGT+TGG 0.445876 4_2:-8800886 Msa0587310:five_prime_UTR
TCTCACTCAGAGCTAATGAA+TGG 0.447110 4_2:-8800992 Msa0587310:five_prime_UTR
TTAGTAGAGGCGGTCTTCAA+TGG 0.454485 4_2:-8800903 Msa0587310:five_prime_UTR
ACTACTGATGATACCATTGA+TGG 0.457074 4_2:-8800633 Msa0587310:CDS
GAACTTATCTCTTCTCCAGT+TGG 0.457485 4_2:+8793697 None:intergenic
TGATGAACAAGTGAAGAAAA+TGG 0.458019 4_2:-8792636 Msa0587310:CDS
AGTACCTGAATAACCATTCT+GGG 0.461208 4_2:-8793657 Msa0587310:CDS
ATCGACGTTATCAGCATCAC+TGG 0.464758 4_2:+8793402 None:intergenic
TGATATTGATTATCGTTCTA+CGG 0.471118 4_2:-8800781 Msa0587310:CDS
TTTCCTTTCCATTAAATCAA+AGG 0.478785 4_2:+8800827 None:intergenic
AAACGTAGTCGAAAATCATC+TGG 0.479428 4_2:-8793520 Msa0587310:CDS
TGTCACTGAAAAGCCGCAAT+TGG 0.480488 4_2:-8793063 Msa0587310:CDS
CAATCAAACTCTGATATGTC+AGG 0.483410 4_2:+8793631 None:intergenic
CGAATCAAAAGATGATTACT+TGG 0.483807 4_2:-8801048 Msa0587310:five_prime_UTR
AGGTATTTGTCTATGAAATC+CGG 0.492203 4_2:+8801118 None:intergenic
AGTTACAAGCAGGAGAAATC+CGG 0.493425 4_2:-8792764 Msa0587310:CDS
GGAGCAACGAAAGCGATCTC+AGG 0.495893 4_2:+8793718 None:intergenic
TAGAGGATTTCTAAGTCTAT+GGG 0.497173 4_2:-8800739 Msa0587310:CDS
AACAAGGATTCCATCGCAAA+TGG 0.500580 4_2:-8792800 Msa0587310:CDS
TGTGAAACATTTGGAGGGAA+AGG 0.501916 4_2:+8801098 None:intergenic
ATCAAAAGATGATTACTTGG+TGG 0.502935 4_2:-8801045 Msa0587310:five_prime_UTR
CAAATTAAAGGTTCATGTAG+AGG 0.506008 4_2:-8801191 Msa0587310:five_prime_UTR
CTAATCCTTGATGATCGCCT+TGG 0.506450 4_2:+8793592 None:intergenic
TACAGGGGAAACACCATCAA+TGG 0.508026 4_2:+8800620 None:intergenic
CTCACTCAGAGCTAATGAAT+GGG 0.511679 4_2:-8800991 Msa0587310:five_prime_UTR
AAAATCATCTGGTTCAAAGA+AGG 0.513211 4_2:-8793509 Msa0587310:CDS
TCTTCAATGGAGCTATTCAC+TGG 0.513798 4_2:-8800890 Msa0587310:five_prime_UTR
AACAGATTGCGTTACTGGAT+TGG 0.516231 4_2:-8800568 Msa0587310:CDS
TCCACAGAAAGTTGTTCCAC+CGG 0.516693 4_2:+8792864 None:intergenic
CAGTTCTTCCCTAAGAAGAA+AGG 0.518232 4_2:-8793754 Msa0587310:CDS
TCAGAGGAAGCCAAGGAAAA+GGG 0.519779 4_2:-8793457 Msa0587310:CDS
AGGGGAGGCACCAGTTGAGT+TGG 0.522143 4_2:-8792949 Msa0587310:CDS
AGCTGATAGCAGTTACAAGC+AGG 0.530507 4_2:-8792774 Msa0587310:CDS
AAATTAAAGGTTCATGTAGA+GGG 0.531136 4_2:-8801190 Msa0587310:five_prime_UTR
ACAGATGTTTCTTCCACTTG+AGG 0.531202 4_2:+8792894 None:intergenic
TTGCCTTTGATTTAATGGAA+AGG 0.533360 4_2:-8800830 Msa0587310:exon
AGTCTTTGCTTTCACTCCCA+TGG 0.535002 4_2:-8800458 Msa0587310:CDS
TTGAAGACCGCCTCTACTAA+GGG 0.537668 4_2:+8800906 None:intergenic
CTTAAATGTGAAACATTTGG+AGG 0.539043 4_2:+8801092 None:intergenic
ATATGTCAGGATTCCCAGAA+TGG 0.543833 4_2:+8793644 None:intergenic
TGTCTATGAAATCCGGTGGA+TGG 0.546054 4_2:+8801125 None:intergenic
ATCGATATTTCTTCCACTCG+AGG 0.548217 4_2:+8793035 None:intergenic
GGAGGCTCAGCTTGTGCAGG+TGG 0.548233 4_2:+8793547 None:intergenic
TTCACGAAATGGATTCCGAT+TGG 0.548703 4_2:-8800493 Msa0587310:CDS
ACCAGTTTCTTCCAATTGGG+AGG 0.551180 4_2:+8799850 None:intergenic
TGATCGCCTTGGTGTCTCGC+CGG 0.553220 4_2:+8793603 None:intergenic
AACTCCTTCAGAGGAAGCCA+AGG 0.553718 4_2:-8793464 Msa0587310:CDS
CTCTACTAAGGGATAATCAA+AGG 0.556603 4_2:+8800917 None:intergenic
TAAGGGATAATCAAAGGAAG+AGG 0.560601 4_2:+8800923 None:intergenic
CTTTGATTATCCCTTAGTAG+AGG 0.564980 4_2:-8800916 Msa0587310:five_prime_UTR
ACCGGTGGAACAACTTTCTG+TGG 0.568801 4_2:-8792865 Msa0587310:CDS
ATCAGCTGTACCATTTGCGA+TGG 0.569037 4_2:+8792790 None:intergenic
ACTCTGTATACATAGCCAAT+CGG 0.573189 4_2:+8800478 None:intergenic
AACGATAATCAATATCATCT+GGG 0.573852 4_2:+8800787 None:intergenic
AACATCTGTGGCGGAACCGG+TGG 0.584950 4_2:-8792880 Msa0587310:CDS
AGACACCAAGGCGATCATCA+AGG 0.592892 4_2:-8793597 Msa0587310:CDS
TATATATGGAATCCATCCAC+CGG 0.596418 4_2:-8801137 Msa0587310:five_prime_UTR
TCATCTGGTTCAAAGAAGGA+TGG 0.597757 4_2:-8793505 Msa0587310:CDS
TCTAAGTCTATGGGTTATGG+TGG 0.598732 4_2:-8800730 Msa0587310:CDS
TTAAATGTGAAACATTTGGA+GGG 0.599802 4_2:+8801093 None:intergenic
GACATATCAGAGTTTGATTG+GGG 0.603872 4_2:-8793628 Msa0587310:CDS
TTTCGACTACGTTTCTTCGG+AGG 0.606353 4_2:+8793529 None:intergenic
TGATTATCCCTTAGTAGAGG+CGG 0.612867 4_2:-8800913 Msa0587310:five_prime_UTR
TAATCAATATCATCTGGGAG+AGG 0.613479 4_2:+8800792 None:intergenic
GCAGGAGAAATCCGGCGCAG+AGG 0.617471 4_2:-8792756 Msa0587310:CDS
TGGTTCAAAGAAGGATGGCA+AGG 0.620902 4_2:-8793500 Msa0587310:CDS
TGAAACTGAAACTCCTTCAG+AGG 0.634291 4_2:-8793473 Msa0587310:CDS
GCAATTGGAAAAGCCTCGAG+TGG 0.638064 4_2:-8793048 Msa0587310:CDS
TGAATTGGAAAAGCCTCAAG+TGG 0.640871 4_2:-8792907 Msa0587310:CDS
TATTTGTCTATGAAATCCGG+TGG 0.647593 4_2:+8801121 None:intergenic
GGGGAACCGGCGAGACACCA+AGG 0.652825 4_2:-8793609 Msa0587310:CDS
AGTGGAAGAAACATCTGTGG+CGG 0.655911 4_2:-8792889 Msa0587310:CDS
AACAAAGATTGACAATGCAG+AGG 0.660703 4_2:-8793374 Msa0587310:intron
TCGACGTTATCAGCATCACT+GGG 0.664246 4_2:+8793403 None:intergenic
TCGAGTGGAAGAAATATCGA+TGG 0.669589 4_2:-8793033 Msa0587310:CDS
TAATGAATGGGAAGAAATCG+TGG 0.669771 4_2:-8800979 Msa0587310:five_prime_UTR
AAACCCAAAGAGGAAGAACA+AGG 0.669986 4_2:-8792816 Msa0587310:CDS
TCAAGTGGAAGAAACATCTG+TGG 0.690470 4_2:-8792892 Msa0587310:CDS
TCCGGCGCAGAGGAAAACGA+AGG 0.703991 4_2:-8792746 Msa0587310:CDS
AGTGGAAGAAATATCGATGG+CGG 0.704302 4_2:-8793030 Msa0587310:CDS
TTGGTGAGATATGATGACAA+AGG 0.738918 4_2:-8800549 Msa0587310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAAATATCTAGAAAA+CGG + chr4_2:8793403-8793422 None:intergenic 10.0%
!!! TTTTATTGTAATTAAAGAAA+TGG + chr4_2:8794290-8794309 None:intergenic 10.0%
!! AAGCTAATAATAAAAAATAA+AGG + chr4_2:8798614-8798633 None:intergenic 10.0%
!!! TTAATTAACTTTTTTTTTGA+AGG - chr4_2:8798793-8798812 Msa0587310:intron 10.0%
!!! TTTTTTATTTTTTGTTTTTG+TGG - chr4_2:8799250-8799269 Msa0587310:intron 10.0%
!!! TTTTTATTTTTTGTTTTTGT+GGG - chr4_2:8799251-8799270 Msa0587310:intron 10.0%
!!! GTAAAATGTTTATGTTTTTT+TGG - chr4_2:8793491-8793510 Msa0587310:CDS 15.0%
!! ACTATTTGTAATATGTTTAT+TGG - chr4_2:8793517-8793536 Msa0587310:CDS 15.0%
!!! TTCAATTGTTCATATTTTAT+AGG - chr4_2:8793872-8793891 Msa0587310:intron 15.0%
!!! TCAATTGTTCATATTTTATA+GGG - chr4_2:8793873-8793892 Msa0587310:intron 15.0%
!!! TTTTTAAATAGAATAAGGAT+GGG - chr4_2:8794147-8794166 Msa0587310:intron 15.0%
!! TAATTACAATAAAATATCTC+TGG - chr4_2:8794296-8794315 Msa0587310:intron 15.0%
!! AATTACAATAAAATATCTCT+GGG - chr4_2:8794297-8794316 Msa0587310:intron 15.0%
!! TAAATCTAATTTAGAGAAAA+TGG - chr4_2:8796205-8796224 Msa0587310:intron 15.0%
!!! AGGTTATTTATTAATTTTTC+AGG + chr4_2:8796633-8796652 None:intergenic 15.0%
!!! TGTTAAAATTTGTTGATTTT+TGG - chr4_2:8797450-8797469 Msa0587310:intron 15.0%
!!! GTTAAAATTTGTTGATTTTT+GGG - chr4_2:8797451-8797470 Msa0587310:intron 15.0%
!! AAATCACATAAAAAAAATCA+AGG + chr4_2:8798466-8798485 None:intergenic 15.0%
!!! ATTCAATTGTTCATTTTTTT+AGG - chr4_2:8798669-8798688 Msa0587310:intron 15.0%
!!! TTCAATTGTTCATTTTTTTA+GGG - chr4_2:8798670-8798689 Msa0587310:intron 15.0%
!! TACTTGTAAAAAAACAAAAT+TGG - chr4_2:8798964-8798983 Msa0587310:intron 15.0%
!! ACTTGTAAAAAAACAAAATT+GGG - chr4_2:8798965-8798984 Msa0587310:intron 15.0%
!!! ATTTTGAAGTTTTTGTTTTT+TGG - chr4_2:8799198-8799217 Msa0587310:intron 15.0%
!!! TTTTGAAGTTTTTGTTTTTT+GGG - chr4_2:8799199-8799218 Msa0587310:intron 15.0%
!!! ACATGAAATGTTATATTTTT+TGG - chr4_2:8799653-8799672 Msa0587310:intron 15.0%
!! TTTGTTTAAACGCTTATATA+TGG - chr4_2:8792644-8792663 Msa0587310:CDS 20.0%
!! AAACTTAAATGTGAAACATT+TGG + chr4_2:8792709-8792728 None:intergenic 20.0%
!!! ATTTAAGTTTCTATGGTTTT+GGG - chr4_2:8792719-8792738 Msa0587310:CDS 20.0%
!!! AAAAACATAAACATTTTACG+AGG + chr4_2:8793490-8793509 None:intergenic 20.0%
!! AGATACATATGCATAAATAA+CGG + chr4_2:8793573-8793592 None:intergenic 20.0%
!! AAAAGTTTATTCATACTTGA+TGG - chr4_2:8793810-8793829 Msa0587310:intron 20.0%
!!! CTAGCATACATATTTTTTAT+AGG + chr4_2:8794071-8794090 None:intergenic 20.0%
!! CTATAAAAAATATGTATGCT+AGG - chr4_2:8794069-8794088 Msa0587310:intron 20.0%
!!! GTTGCTTTTTAAATAGAATA+AGG - chr4_2:8794142-8794161 Msa0587310:intron 20.0%
!!! CTTTTTAAATAGAATAAGGA+TGG - chr4_2:8794146-8794165 Msa0587310:intron 20.0%
!!! TTTTAAATAGAATAAGGATG+GGG - chr4_2:8794148-8794167 Msa0587310:intron 20.0%
!! TGTTAGATTACAGAATAATA+TGG + chr4_2:8794382-8794401 None:intergenic 20.0%
!! TTATTCTGTAATCTAACAAT+TGG - chr4_2:8794384-8794403 Msa0587310:intron 20.0%
!!! ATTTCTATGGATTTTATTGA+AGG + chr4_2:8794808-8794827 None:intergenic 20.0%
!! AATTATAAGAAATGCACATT+TGG + chr4_2:8795906-8795925 None:intergenic 20.0%
!! AAATGTGCATTTCTTATAAT+TGG - chr4_2:8795905-8795924 Msa0587310:intron 20.0%
!!! TCTAAATTAGATTTAAAGTC+TGG + chr4_2:8796200-8796219 None:intergenic 20.0%
!! TCTAACAATTCATCAATTAT+TGG - chr4_2:8796245-8796264 Msa0587310:intron 20.0%
!! AATTCATCAATTATTGGAAT+AGG - chr4_2:8796251-8796270 Msa0587310:intron 20.0%
!! ATTCATCAATTATTGGAATA+GGG - chr4_2:8796252-8796271 Msa0587310:intron 20.0%
!! ACATTATCAAAAGAATGAAA+TGG + chr4_2:8796432-8796451 None:intergenic 20.0%
!!! ATTTCATTCTTTTGATAATG+TGG - chr4_2:8796431-8796450 Msa0587310:intron 20.0%
!!! TTTCATTCTTTTGATAATGT+GGG - chr4_2:8796432-8796451 Msa0587310:intron 20.0%
!! GATTTCTATATCTTTGAATT+GGG + chr4_2:8796843-8796862 None:intergenic 20.0%
!! AGATTTCTATATCTTTGAAT+TGG + chr4_2:8796844-8796863 None:intergenic 20.0%
!! GAAGCTAATAAAAAAAATCA+AGG + chr4_2:8798491-8798510 None:intergenic 20.0%
!! TAATGTTATGAAGAATTTAG+TGG - chr4_2:8798856-8798875 Msa0587310:intron 20.0%
!! CTTGTAAAAAAACAAAATTG+GGG - chr4_2:8798966-8798985 Msa0587310:intron 20.0%
!! TTCTTGAAATTACTTAAGTT+AGG - chr4_2:8799175-8799194 Msa0587310:intron 20.0%
!! AAACAAATCAAAACTTTACA+AGG + chr4_2:8799233-8799252 None:intergenic 20.0%
!! TAATAAAGCATACAACTAAA+AGG + chr4_2:8799983-8800002 None:intergenic 20.0%
!!! TTTAGTTGTATGCTTTATTA+TGG - chr4_2:8799983-8800002 Msa0587310:intron 20.0%
!!! ATTGTTTTATAACGCATTTT+TGG - chr4_2:8800008-8800027 Msa0587310:intron 20.0%
!! AATGTTGAAGATATCATTAA+TGG - chr4_2:8801091-8801110 Msa0587310:five_prime_UTR 20.0%
!!! TTGATAATGAAAGTGTTATT+TGG - chr4_2:8801182-8801201 Msa0587310:five_prime_UTR 20.0%
! AAATTAAAGGTTCATGTAGA+GGG - chr4_2:8792605-8792624 Msa0587310:CDS 25.0%
! TTAAATGTGAAACATTTGGA+GGG + chr4_2:8792705-8792724 None:intergenic 25.0%
!! GTTTCACATTTAAGTTTCTA+TGG - chr4_2:8792712-8792731 Msa0587310:CDS 25.0%
!!! CATTTAAGTTTCTATGGTTT+TGG - chr4_2:8792718-8792737 Msa0587310:CDS 25.0%
!!! TTCAGTTTTGTATGATTACT+TGG - chr4_2:8792774-8792793 Msa0587310:CDS 25.0%
!!! TCAGTTTTGTATGATTACTT+GGG - chr4_2:8792775-8792794 Msa0587310:CDS 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG - chr4_2:8792960-8792979 Msa0587310:CDS 25.0%
! TTTCCTTTCCATTAAATCAA+AGG + chr4_2:8792971-8792990 None:intergenic 25.0%
! AACGATAATCAATATCATCT+GGG + chr4_2:8793011-8793030 None:intergenic 25.0%
!! TGATATTGATTATCGTTCTA+CGG - chr4_2:8793014-8793033 Msa0587310:CDS 25.0%
!!! TTCTACGGATTTTGATTTAT+GGG - chr4_2:8793029-8793048 Msa0587310:CDS 25.0%
!! TTTGATTTATGGGTATTTAG+AGG - chr4_2:8793039-8793058 Msa0587310:CDS 25.0%
! TGTGCTCATGTTATAAATTT+CGG + chr4_2:8793452-8793471 None:intergenic 25.0%
! GTTATTTATGCATATGTATC+TGG - chr4_2:8793572-8793591 Msa0587310:CDS 25.0%
!!! ATGCTTGGAATTGTTTTATA+TGG - chr4_2:8793708-8793727 Msa0587310:CDS 25.0%
!!! GAATTGTTTTATATGGTAAG+TGG - chr4_2:8793715-8793734 Msa0587310:CDS 25.0%
!!! GCATACATATTTTTTATAGG+AGG + chr4_2:8794068-8794087 None:intergenic 25.0%
! TTAAAGAAATGGAAACTGAT+GGG + chr4_2:8794279-8794298 None:intergenic 25.0%
! ATTAAAGAAATGGAAACTGA+TGG + chr4_2:8794280-8794299 None:intergenic 25.0%
! TAGATTACAGAATAATATGG+TGG + chr4_2:8794379-8794398 None:intergenic 25.0%
! ACTTACTTAAGATGTTTAAC+AGG + chr4_2:8794487-8794506 None:intergenic 25.0%
!!! ATAGGAAGTTGTTTTACAAA+GGG + chr4_2:8795086-8795105 None:intergenic 25.0%
!!! AATAGGAAGTTGTTTTACAA+AGG + chr4_2:8795087-8795106 None:intergenic 25.0%
!! CAAACTATACTTTTCAGAAT+AGG + chr4_2:8795104-8795123 None:intergenic 25.0%
!! CTATTCTGAAAAGTATAGTT+TGG - chr4_2:8795102-8795121 Msa0587310:intron 25.0%
! TTTGACATTGTTTATAAACC+TGG + chr4_2:8795288-8795307 None:intergenic 25.0%
!!! GAAGAAATTTCAGACTTTTT+TGG - chr4_2:8795370-8795389 Msa0587310:intron 25.0%
! AAAAGATATTAGATCTTTGC+GGG + chr4_2:8795787-8795806 None:intergenic 25.0%
! CAAAAGATATTAGATCTTTG+CGG + chr4_2:8795788-8795807 None:intergenic 25.0%
!!! AGCATTGAATCAATTTTCTT+TGG - chr4_2:8795822-8795841 Msa0587310:intron 25.0%
!! GCATTGAATCAATTTTCTTT+GGG - chr4_2:8795823-8795842 Msa0587310:intron 25.0%
! GATGAATTGTTAGATGAATT+GGG + chr4_2:8796239-8796258 None:intergenic 25.0%
! TGATGAATTGTTAGATGAAT+TGG + chr4_2:8796240-8796259 None:intergenic 25.0%
! AGAAATCTTGTTGAATGTAT+AGG - chr4_2:8796856-8796875 Msa0587310:intron 25.0%
!! TCATCTGTAAGTCTTTTAAA+CGG - chr4_2:8797299-8797318 Msa0587310:intron 25.0%
!! TTTTTCTGATACCAATTGTT+AGG - chr4_2:8798220-8798239 Msa0587310:intron 25.0%
!!! GTTATTGTTATTTGTTACTG+TGG - chr4_2:8798733-8798752 Msa0587310:intron 25.0%
!!! TAGTGCTAAATTTTGTTTCT+AGG - chr4_2:8799098-8799117 Msa0587310:intron 25.0%
!!! AGTGCTAAATTTTGTTTCTA+GGG - chr4_2:8799099-8799118 Msa0587310:intron 25.0%
!! AATCTAAGATGTTCAACATT+GGG - chr4_2:8799274-8799293 Msa0587310:intron 25.0%
!! AACTTTTTGTGGAGAAAATA+TGG - chr4_2:8799357-8799376 Msa0587310:intron 25.0%
!!! CACTTTGATTTTATCCAAAA+TGG - chr4_2:8799595-8799614 Msa0587310:intron 25.0%
!! TTACAAATCAGAATCCATTT+TGG + chr4_2:8799612-8799631 None:intergenic 25.0%
!! TGCATTTTCTAAACTATTCT+AGG - chr4_2:8799698-8799717 Msa0587310:intron 25.0%
! TGTTGCAAACATGTTTATAT+TGG - chr4_2:8799953-8799972 Msa0587310:intron 25.0%
!!! ACAACTTTTTGAGAAATCTT+TGG - chr4_2:8800798-8800817 Msa0587310:CDS 25.0%
!! TTGTTGTTGAAAAACTATCA+GGG - chr4_2:8800827-8800846 Msa0587310:exon 25.0%
CAAATTAAAGGTTCATGTAG+AGG - chr4_2:8792604-8792623 Msa0587310:CDS 30.0%
AGGTATTTGTCTATGAAATC+CGG + chr4_2:8792680-8792699 None:intergenic 30.0%
CTTAAATGTGAAACATTTGG+AGG + chr4_2:8792706-8792725 None:intergenic 30.0%
CGAATCAAAAGATGATTACT+TGG - chr4_2:8792747-8792766 Msa0587310:CDS 30.0%
ATCAAAAGATGATTACTTGG+TGG - chr4_2:8792750-8792769 Msa0587310:CDS 30.0%
!! CAGTTTTGTATGATTACTTG+GGG - chr4_2:8792776-8792795 Msa0587310:CDS 30.0%
! TTGCCTTTGATTTAATGGAA+AGG - chr4_2:8792965-8792984 Msa0587310:CDS 30.0%
GAACGATAATCAATATCATC+TGG + chr4_2:8793012-8793031 None:intergenic 30.0%
!!! GTTCTACGGATTTTGATTTA+TGG - chr4_2:8793028-8793047 Msa0587310:CDS 30.0%
TTAGAGGATTTCTAAGTCTA+TGG - chr4_2:8793055-8793074 Msa0587310:CDS 30.0%
TAGAGGATTTCTAAGTCTAT+GGG - chr4_2:8793056-8793075 Msa0587310:CDS 30.0%
! ATTTCTAAGTCTATGGGTTA+TGG - chr4_2:8793062-8793081 Msa0587310:CDS 30.0%
ACAAAAAGTGGTGATATTGT+TGG - chr4_2:8793204-8793223 Msa0587310:intron 30.0%
TATTGCAAAGATTCACGAAA+TGG - chr4_2:8793291-8793310 Msa0587310:intron 30.0%
AAATATCTAGAAAACGGTGA+AGG + chr4_2:8793397-8793416 None:intergenic 30.0%
ATAAGTTCTTTGAGTCAAAG+CGG + chr4_2:8793788-8793807 None:intergenic 30.0%
!!! TGTAGTTTTTTTCTGTTAGC+AGG - chr4_2:8794042-8794061 Msa0587310:intron 30.0%
TAATATGGGCTTAACTACTT+GGG + chr4_2:8794110-8794129 None:intergenic 30.0%
ATAATATGGGCTTAACTACT+TGG + chr4_2:8794111-8794130 None:intergenic 30.0%
GAATTACAATTTGTAACTGC+TGG + chr4_2:8794257-8794276 None:intergenic 30.0%
! AATATGGTGGAATATGGAAA+GGG + chr4_2:8794366-8794385 None:intergenic 30.0%
! TAATATGGTGGAATATGGAA+AGG + chr4_2:8794367-8794386 None:intergenic 30.0%
! CAGAATAATATGGTGGAATA+TGG + chr4_2:8794372-8794391 None:intergenic 30.0%
AACATCTTAAGTAAGTCTCT+AGG - chr4_2:8794491-8794510 Msa0587310:intron 30.0%
TGAATAATTCTGTCCAGAAA+TGG - chr4_2:8794593-8794612 Msa0587310:intron 30.0%
AAATATTTCTCAGCCATTTC+TGG + chr4_2:8794609-8794628 None:intergenic 30.0%
! AAAAGTATAGTTTGGATGAG+TGG - chr4_2:8795110-8795129 Msa0587310:intron 30.0%
AAGTGGACATCTAAATTGAT+GGG + chr4_2:8795318-8795337 None:intergenic 30.0%
ATTTAGATGTCCACTTGAAT+TGG - chr4_2:8795322-8795341 Msa0587310:intron 30.0%
! CTTCAAGATCAGAGAATTTT+GGG + chr4_2:8795354-8795373 None:intergenic 30.0%
! TCTTCAAGATCAGAGAATTT+TGG + chr4_2:8795355-8795374 None:intergenic 30.0%
AAATGGAGACACTATTTGAT+GGG + chr4_2:8795420-8795439 None:intergenic 30.0%
GAAGAAATCTGTTTATGAGA+GGG + chr4_2:8795472-8795491 None:intergenic 30.0%
AGAAGAAATCTGTTTATGAG+AGG + chr4_2:8795473-8795492 None:intergenic 30.0%
TGAGACATTAAAAAAAGCCA+TGG + chr4_2:8795640-8795659 None:intergenic 30.0%
TCAAGAAGGACAATTTCTAT+TGG + chr4_2:8795686-8795705 None:intergenic 30.0%
AAAGATATTAGATCTTTGCG+GGG + chr4_2:8795786-8795805 None:intergenic 30.0%
! CGCAAAGATCTAATATCTTT+TGG - chr4_2:8795786-8795805 Msa0587310:intron 30.0%
!!! GATCTAATATCTTTTGGTTC+CGG - chr4_2:8795792-8795811 Msa0587310:intron 30.0%
! AAATTGATTCAATGCTCACT+TGG + chr4_2:8795818-8795837 None:intergenic 30.0%
!!! AGTGTTTTTTGATGACATTC+TGG + chr4_2:8796009-8796028 None:intergenic 30.0%
AGAACAAGTTTCCTCAAATA+AGG - chr4_2:8796029-8796048 Msa0587310:intron 30.0%
! CTTTGATGAATGAGGTATTA+CGG + chr4_2:8796055-8796074 None:intergenic 30.0%
! GAATTTATTGTCATGCCTTT+TGG + chr4_2:8796107-8796126 None:intergenic 30.0%
GCATGACAATAAATTCATAG+TGG - chr4_2:8796111-8796130 Msa0587310:intron 30.0%
TATTGGAATAGGGAATTTGT+TGG - chr4_2:8796262-8796281 Msa0587310:intron 30.0%
! ATTGGAATAGGGAATTTGTT+GGG - chr4_2:8796263-8796282 Msa0587310:intron 30.0%
!! GGGGATTGTAATTTTGTTTA+AGG - chr4_2:8796283-8796302 Msa0587310:intron 30.0%
! ATACTGGTTAAGAAGAAAGA+TGG + chr4_2:8796338-8796357 None:intergenic 30.0%
GTGAATGATATGTTGAAATC+TGG + chr4_2:8796401-8796420 None:intergenic 30.0%
!! CATGCAATTGTTTTACAAGA+AGG + chr4_2:8796491-8796510 None:intergenic 30.0%
CTTCTTGTAAAACAATTGCA+TGG - chr4_2:8796489-8796508 Msa0587310:intron 30.0%
TAAAACAATTGCATGGTCAT+GGG - chr4_2:8796496-8796515 Msa0587310:intron 30.0%
!! TTTGTACATACTTTTGAGAG+AGG - chr4_2:8796674-8796693 Msa0587310:intron 30.0%
GAGAATTAAATCTCCAAAGT+TGG - chr4_2:8796761-8796780 Msa0587310:intron 30.0%
TATCTTTGAATTGGGAAATG+TGG + chr4_2:8796835-8796854 None:intergenic 30.0%
CTATCCATGTATAGTATTTC+CGG + chr4_2:8797104-8797123 None:intergenic 30.0%
ACAAACTTCAGAATCAGATT+CGG + chr4_2:8797144-8797163 None:intergenic 30.0%
!! AATCTGATTCTGAAGTTTGT+TGG - chr4_2:8797144-8797163 Msa0587310:intron 30.0%
!! ATCTGATTCTGAAGTTTGTT+GGG - chr4_2:8797145-8797164 Msa0587310:intron 30.0%
AACACCTTGAATTGCTTATT+GGG - chr4_2:8797203-8797222 Msa0587310:intron 30.0%
TTACAAGACAAATTCACCAA+AGG + chr4_2:8797275-8797294 None:intergenic 30.0%
GTTTAAAAGACTTACAGATG+AGG + chr4_2:8797300-8797319 None:intergenic 30.0%
! AGAATGTGCTTTTAAACCAA+GGG + chr4_2:8797487-8797506 None:intergenic 30.0%
! AAGAATGTGCTTTTAAACCA+AGG + chr4_2:8797488-8797507 None:intergenic 30.0%
TTGTGCATAATCCATCAATT+CGG - chr4_2:8797520-8797539 Msa0587310:intron 30.0%
GGCTGAATTAAAATTACATC+CGG + chr4_2:8797558-8797577 None:intergenic 30.0%
!! AATATACCTTTGAGATACTC+AGG - chr4_2:8797605-8797624 Msa0587310:intron 30.0%
TTAACGATACCTATGTTTGA+GGG + chr4_2:8797938-8797957 None:intergenic 30.0%
ATTAACGATACCTATGTTTG+AGG + chr4_2:8797939-8797958 None:intergenic 30.0%
!!! TTTTTAGAACGTGCTTATGA+AGG + chr4_2:8798142-8798161 None:intergenic 30.0%
TGATATCAGTTCCTAACAAT+TGG + chr4_2:8798234-8798253 None:intergenic 30.0%
! AATAGAAACCAACTGATTCA+GGG + chr4_2:8798372-8798391 None:intergenic 30.0%
! TTTATGCAGCTCAGATTTTT+AGG - chr4_2:8798417-8798436 Msa0587310:intron 30.0%
TGTTATGAAGAATTTAGTGG+TGG - chr4_2:8798859-8798878 Msa0587310:intron 30.0%
!! TTTCTAGGGTTTACCTAAAT+GGG - chr4_2:8798888-8798907 Msa0587310:intron 30.0%
CTGTAAATTAAACCCCATTT+AGG + chr4_2:8798904-8798923 None:intergenic 30.0%
! GGGGTTTAATTTACAGAATT+TGG - chr4_2:8798908-8798927 Msa0587310:intron 30.0%
!! TGGTACTAGATTTTGTTTCT+AGG - chr4_2:8798928-8798947 Msa0587310:intron 30.0%
!!! GGTACTAGATTTTGTTTCTA+GGG - chr4_2:8798929-8798948 Msa0587310:intron 30.0%
!!! ACCTTTTAGAATTTGGTACT+AGG - chr4_2:8799025-8799044 Msa0587310:intron 30.0%
ACCTAGTACCAAATTCTAAA+AGG + chr4_2:8799029-8799048 None:intergenic 30.0%
! TGGTACTAGGTTTCAATTTT+AGG - chr4_2:8799038-8799057 Msa0587310:intron 30.0%
! GGTACTAGGTTTCAATTTTA+GGG - chr4_2:8799039-8799058 Msa0587310:intron 30.0%
AAAACCTAGTACCAAATTCA+AGG + chr4_2:8799143-8799162 None:intergenic 30.0%
! GAATCTAAGATGTTCAACAT+TGG - chr4_2:8799273-8799292 Msa0587310:intron 30.0%
!!! GTAGAAATTGGTTTTTGACA+AGG - chr4_2:8799296-8799315 Msa0587310:intron 30.0%
AACATACTCTTACACCAAAA+TGG - chr4_2:8799331-8799350 Msa0587310:intron 30.0%
! CACAAAAAGTTGAACCATTT+TGG + chr4_2:8799348-8799367 None:intergenic 30.0%
! CAAAATGGTTCAACTTTTTG+TGG - chr4_2:8799346-8799365 Msa0587310:intron 30.0%
AAAATCACCTGAATCAAACA+GGG + chr4_2:8799501-8799520 None:intergenic 30.0%
AAAAATCACCTGAATCAAAC+AGG + chr4_2:8799502-8799521 None:intergenic 30.0%
TAAAATCAAAGTGCAAAGCA+GGG + chr4_2:8799588-8799607 None:intergenic 30.0%
ATAAAATCAAAGTGCAAAGC+AGG + chr4_2:8799589-8799608 None:intergenic 30.0%
! TTTTGGTGAAAATTATCCAC+CGG - chr4_2:8799670-8799689 Msa0587310:intron 30.0%
GTTTAGAAAATGCAATTTGC+CGG + chr4_2:8799692-8799711 None:intergenic 30.0%
CTTACTGTTTAGTGATTTAC+TGG - chr4_2:8799746-8799765 Msa0587310:intron 30.0%
!! TATGTGTTAGTGTTGCTTAT+TGG - chr4_2:8799904-8799923 Msa0587310:CDS 30.0%
! GTACTTCTTCAATTGTCTTT+TGG + chr4_2:8800123-8800142 None:intergenic 30.0%
TGACATATCAGAGTTTGATT+GGG - chr4_2:8800166-8800185 Msa0587310:intron 30.0%
! AAAATCATCTGGTTCAAAGA+AGG - chr4_2:8800286-8800305 Msa0587310:intron 30.0%
GGTAATTAAGCAAAGTAATG+TGG - chr4_2:8800442-8800461 Msa0587310:CDS 30.0%
ATTAAGCAAAGTAATGTGGA+AGG - chr4_2:8800446-8800465 Msa0587310:CDS 30.0%
! GTTGTTGTTGAAAAACTATC+AGG - chr4_2:8800826-8800845 Msa0587310:exon 30.0%
TGTTGTTGAAAAACTATCAG+GGG - chr4_2:8800828-8800847 Msa0587310:exon 30.0%
! TTTTCTTTTTCCAACTCAAC+TGG + chr4_2:8800859-8800878 None:intergenic 30.0%
AGAAAATAGTACAGCTGAAT+TGG - chr4_2:8800873-8800892 Msa0587310:five_prime_UTR 30.0%
GATGAAAAGCAAACAATTCA+AGG - chr4_2:8801136-8801155 Msa0587310:five_prime_UTR 30.0%
TGATGAACAAGTGAAGAAAA+TGG - chr4_2:8801159-8801178 Msa0587310:five_prime_UTR 30.0%
TATATATGGAATCCATCCAC+CGG - chr4_2:8792658-8792677 Msa0587310:CDS 35.0%
TATTTGTCTATGAAATCCGG+TGG + chr4_2:8792677-8792696 None:intergenic 35.0%
TAATGAATGGGAAGAAATCG+TGG - chr4_2:8792816-8792835 Msa0587310:CDS 35.0%
CCTTACTACAAAAAGGCAAA+TGG + chr4_2:8792849-8792868 None:intergenic 35.0%
! CCATTTGCCTTTTTGTAGTA+AGG - chr4_2:8792846-8792865 Msa0587310:CDS 35.0%
TAAGGGATAATCAAAGGAAG+AGG + chr4_2:8792875-8792894 None:intergenic 35.0%
CTCTACTAAGGGATAATCAA+AGG + chr4_2:8792881-8792900 None:intergenic 35.0%
CTTTGATTATCCCTTAGTAG+AGG - chr4_2:8792879-8792898 Msa0587310:CDS 35.0%
TAATCAATATCATCTGGGAG+AGG + chr4_2:8793006-8793025 None:intergenic 35.0%
! ACGAGTATACGGTTGATATA+TGG - chr4_2:8793088-8793107 Msa0587310:intron 35.0%
! CGAGTATACGGTTGATATAT+GGG - chr4_2:8793089-8793108 Msa0587310:intron 35.0%
AATACAAAGTGCAGTCATCT+TGG - chr4_2:8793121-8793140 Msa0587310:intron 35.0%
ACTACTGATGATACCATTGA+TGG - chr4_2:8793162-8793181 Msa0587310:intron 35.0%
! ACTTTTTGTGCAACATACAG+GGG + chr4_2:8793193-8793212 None:intergenic 35.0%
!! CACTTTTTGTGCAACATACA+GGG + chr4_2:8793194-8793213 None:intergenic 35.0%
TTGGTGAGATATGATGACAA+AGG - chr4_2:8793246-8793265 Msa0587310:intron 35.0%
TCGTGAATCTTTGCAATAGT+TGG + chr4_2:8793289-8793308 None:intergenic 35.0%
ACTCTGTATACATAGCCAAT+CGG + chr4_2:8793320-8793339 None:intergenic 35.0%
TGTGCTGTATTATGAACTCT+TGG - chr4_2:8793422-8793441 Msa0587310:CDS 35.0%
GTGCTGTATTATGAACTCTT+GGG - chr4_2:8793423-8793442 Msa0587310:CDS 35.0%
TCTAATGTATGTTGCGTTCA+CGG - chr4_2:8793602-8793621 Msa0587310:CDS 35.0%
TGGTAAGTGGTAAATTAGTC+TGG - chr4_2:8793728-8793747 Msa0587310:CDS 35.0%
TAAGTTCTTTGAGTCAAAGC+GGG + chr4_2:8793787-8793806 None:intergenic 35.0%
TTAAGCCCATATTATGCAGT+AGG - chr4_2:8794116-8794135 Msa0587310:intron 35.0%
ACACACCTACTGCATAATAT+GGG + chr4_2:8794124-8794143 None:intergenic 35.0%
AACACACCTACTGCATAATA+TGG + chr4_2:8794125-8794144 None:intergenic 35.0%
!! ATTCAGTGGTTTTACTTCTG+TGG - chr4_2:8794181-8794200 Msa0587310:intron 35.0%
!! TTCAGTGGTTTTACTTCTGT+GGG - chr4_2:8794182-8794201 Msa0587310:intron 35.0%
CTGGAAATTAAACAACCTCT+AGG + chr4_2:8794238-8794257 None:intergenic 35.0%
! AAAGGGTATACTGAGAACAT+TGG + chr4_2:8794349-8794368 None:intergenic 35.0%
AAAATGTGGGTGAAATGGTT+GGG + chr4_2:8794454-8794473 None:intergenic 35.0%
! AACCATTTCACCCACATTTT+CGG - chr4_2:8794454-8794473 Msa0587310:intron 35.0%
AGGTACTAAACCGAAAATGT+GGG + chr4_2:8794467-8794486 None:intergenic 35.0%
ATCTATTAGTCACCTCTGTT+TGG - chr4_2:8794515-8794534 Msa0587310:intron 35.0%
! GGCTGAGAAATATTTTGTCA+CGG - chr4_2:8794614-8794633 Msa0587310:intron 35.0%
TCCATTTAATGCCAAAACTG+TGG + chr4_2:8794701-8794720 None:intergenic 35.0%
TATGCTCATTTCATTCCTCT+TGG + chr4_2:8794727-8794746 None:intergenic 35.0%
! ATTTTATTGAAGGCTTGCCT+AGG + chr4_2:8794798-8794817 None:intergenic 35.0%
AGTATGGACAGACATTTCTA+TGG + chr4_2:8794821-8794840 None:intergenic 35.0%
!!! AGGTCTGATACTTGTTTTGT+TGG - chr4_2:8794884-8794903 Msa0587310:intron 35.0%
TATAGTTTGGATGAGTGGTA+GGG - chr4_2:8795115-8795134 Msa0587310:intron 35.0%
TTTCACAGACATGGAAGAAT+GGG + chr4_2:8795199-8795218 None:intergenic 35.0%
ATTTCACAGACATGGAAGAA+TGG + chr4_2:8795200-8795219 None:intergenic 35.0%
CAAGTGGACATCTAAATTGA+TGG + chr4_2:8795319-8795338 None:intergenic 35.0%
!!! TCAGACTTTTTTGGTCAGTA+TGG - chr4_2:8795379-8795398 Msa0587310:intron 35.0%
GGTCAGTATGGATGATAAAA+TGG - chr4_2:8795391-8795410 Msa0587310:intron 35.0%
CAGTATGGATGATAAAATGG+CGG - chr4_2:8795394-8795413 Msa0587310:intron 35.0%
GAAATGGAGACACTATTTGA+TGG + chr4_2:8795421-8795440 None:intergenic 35.0%
TGTTTATGAGAGGGAACTTA+TGG + chr4_2:8795463-8795482 None:intergenic 35.0%
ATGAAAGGAATAGAGAAGTC+AGG - chr4_2:8795591-8795610 Msa0587310:intron 35.0%
TCTCACACAATTACTCAAGA+AGG + chr4_2:8795700-8795719 None:intergenic 35.0%
TTCTTGAGTAATTGTGTGAG+AGG - chr4_2:8795699-8795718 Msa0587310:intron 35.0%
TCTTATAATTGGCCACTAAC+TGG - chr4_2:8795916-8795935 Msa0587310:intron 35.0%
!! TTTTCAGGCTTTGATGAATG+AGG + chr4_2:8796063-8796082 None:intergenic 35.0%
ATTCATCAAAGCCTGAAAAG+TGG - chr4_2:8796064-8796083 Msa0587310:intron 35.0%
GAATTGTTAGATGAATTGGG+CGG + chr4_2:8796236-8796255 None:intergenic 35.0%
!! TTGGAATAGGGAATTTGTTG+GGG - chr4_2:8796264-8796283 Msa0587310:intron 35.0%
!! TTAAGAAGAAAGATGGTGGA+TGG + chr4_2:8796331-8796350 None:intergenic 35.0%
TTCTTCTTAACCAGTATGAC+AGG - chr4_2:8796341-8796360 Msa0587310:intron 35.0%
AGTATGACAGGACTTGAATA+GGG - chr4_2:8796353-8796372 Msa0587310:intron 35.0%
GTAAAACAATTGCATGGTCA+TGG - chr4_2:8796495-8796514 Msa0587310:intron 35.0%
AGGTCTTTCAAGAGTTTGAA+GGG + chr4_2:8796538-8796557 None:intergenic 35.0%
GGAAATGTGGATATTGTTCT+CGG + chr4_2:8796822-8796841 None:intergenic 35.0%
AAGAAAGATTCCATGTGAAG+GGG + chr4_2:8796913-8796932 None:intergenic 35.0%
GAAGAAAGATTCCATGTGAA+GGG + chr4_2:8796914-8796933 None:intergenic 35.0%
TACTATACATGGATAGTTGC+AGG - chr4_2:8797108-8797127 Msa0587310:intron 35.0%
!! TCTGATTCTGAAGTTTGTTG+GGG - chr4_2:8797146-8797165 Msa0587310:intron 35.0%
CAACACCTTGAATTGCTTAT+TGG - chr4_2:8797202-8797221 Msa0587310:intron 35.0%
ACACCTTGAATTGCTTATTG+GGG - chr4_2:8797204-8797223 Msa0587310:intron 35.0%
ATTGCTTATTGGGGCATATA+TGG - chr4_2:8797213-8797232 Msa0587310:intron 35.0%
GAGAAAATCTCTCATCACAA+CGG - chr4_2:8797240-8797259 Msa0587310:intron 35.0%
!! ATTCTGGTTCATTTCGTAAC+AGG + chr4_2:8797325-8797344 None:intergenic 35.0%
!!! ACCAGAATTTTTTGTACCAC+TGG - chr4_2:8797337-8797356 Msa0587310:intron 35.0%
ACCAGTGGTACAAAAAATTC+TGG + chr4_2:8797341-8797360 None:intergenic 35.0%
AGTCCGTATGAATTGTTGAT+GGG + chr4_2:8797707-8797726 None:intergenic 35.0%
AAGTCCGTATGAATTGTTGA+TGG + chr4_2:8797708-8797727 None:intergenic 35.0%
TCAACAATTCATACGGACTT+TGG - chr4_2:8797708-8797727 Msa0587310:intron 35.0%
TACAGAGCAAGAAAAGATTC+AGG + chr4_2:8797858-8797877 None:intergenic 35.0%
!!! GAGCGCTATTTTGATTTGAA+GGG + chr4_2:8797884-8797903 None:intergenic 35.0%
!!! AGAGCGCTATTTTGATTTGA+AGG + chr4_2:8797885-8797904 None:intergenic 35.0%
AAAGGAATTGCGACAAATCT+TGG + chr4_2:8798095-8798114 None:intergenic 35.0%
! ATTGGGATAAAGGATTGGTA+GGG + chr4_2:8798349-8798368 None:intergenic 35.0%
! GAATAGAAACCAACTGATTC+AGG + chr4_2:8798373-8798392 None:intergenic 35.0%
!!! TAGTGGTGGATTTTGTTTCT+AGG - chr4_2:8798873-8798892 Msa0587310:intron 35.0%
!!! AGTGGTGGATTTTGTTTCTA+GGG - chr4_2:8798874-8798893 Msa0587310:intron 35.0%
!! GTTTCTAGGGTTTACCTAAA+TGG - chr4_2:8798887-8798906 Msa0587310:intron 35.0%
!! TTCTAGGGTTTACCTAAATG+GGG - chr4_2:8798889-8798908 Msa0587310:intron 35.0%
TTTCTTGGGTTTGCCTATAT+GGG - chr4_2:8798999-8799018 Msa0587310:intron 35.0%
TCTAAAAGGTAACCCCATAT+AGG + chr4_2:8799015-8799034 None:intergenic 35.0%
!!! TGGGGTTACCTTTTAGAATT+TGG - chr4_2:8799018-8799037 Msa0587310:intron 35.0%
!!! TTTCTAGGGTTTTCCTGAAA+GGG - chr4_2:8799113-8799132 Msa0587310:intron 35.0%
GTTACCTTGAATTTGGTACT+AGG - chr4_2:8799136-8799155 Msa0587310:intron 35.0%
GTTCAACATTGGGTAGAAAT+TGG - chr4_2:8799284-8799303 Msa0587310:intron 35.0%
!! TGGTGTCAATTTTCCATTTG+TGG - chr4_2:8799377-8799396 Msa0587310:intron 35.0%
! TCTGTGTGCTTGTTCTTTTT+GGG - chr4_2:8799400-8799419 Msa0587310:intron 35.0%
! GGCTTATTGATGTTGTCTTT+TGG - chr4_2:8799421-8799440 Msa0587310:intron 35.0%
!! TCTTTTGGAGATTGTGTCTT+AGG - chr4_2:8799436-8799455 Msa0587310:intron 35.0%
AATACAGAAAGATGCAGGAA+TGG + chr4_2:8799540-8799559 None:intergenic 35.0%
!!! GTGATTTACTGGTTTTGAGA+AGG - chr4_2:8799757-8799776 Msa0587310:intron 35.0%
CTGTTGTAAATATGTTGCAC+CGG - chr4_2:8799799-8799818 Msa0587310:intron 35.0%
! TTGGTGTTCCTTTCTTCTTA+GGG + chr4_2:8800052-8800071 None:intergenic 35.0%
AAGTACCTGAATAACCATTC+TGG - chr4_2:8800137-8800156 Msa0587310:intron 35.0%
AGTACCTGAATAACCATTCT+GGG - chr4_2:8800138-8800157 Msa0587310:intron 35.0%
CAATCAAACTCTGATATGTC+AGG + chr4_2:8800167-8800186 None:intergenic 35.0%
CTGACATATCAGAGTTTGAT+TGG - chr4_2:8800165-8800184 Msa0587310:intron 35.0%
GACATATCAGAGTTTGATTG+GGG - chr4_2:8800167-8800186 Msa0587310:intron 35.0%
! GATTTTCGACTACGTTTCTT+CGG + chr4_2:8800272-8800291 None:intergenic 35.0%
AAACGTAGTCGAAAATCATC+TGG - chr4_2:8800275-8800294 Msa0587310:intron 35.0%
AACAAAGATTGACAATGCAG+AGG - chr4_2:8800421-8800440 Msa0587310:intron 35.0%
! TCCTCAAGAAGTTTTTCTGT+CGG + chr4_2:8800697-8800716 None:intergenic 35.0%
TTCTCAAAAAGTTGTTCTGC+CGG + chr4_2:8800793-8800812 None:intergenic 35.0%
AATCCTTGTTCTTCCTCTTT+GGG + chr4_2:8800985-8801004 None:intergenic 35.0%
TGTGAAACATTTGGAGGGAA+AGG + chr4_2:8792700-8792719 None:intergenic 40.0%
TCTCACTCAGAGCTAATGAA+TGG - chr4_2:8792803-8792822 Msa0587310:CDS 40.0%
CTCACTCAGAGCTAATGAAT+GGG - chr4_2:8792804-8792823 Msa0587310:CDS 40.0%
TGATTATCCCTTAGTAGAGG+CGG - chr4_2:8792882-8792901 Msa0587310:CDS 40.0%
TCTTCAATGGAGCTATTCAC+TGG - chr4_2:8792905-8792924 Msa0587310:CDS 40.0%
! TCTAAGTCTATGGGTTATGG+TGG - chr4_2:8793065-8793084 Msa0587310:CDS 40.0%
!!! CCACTTTTTGTGCAACATAC+AGG + chr4_2:8793195-8793214 None:intergenic 40.0%
CCTGTATGTTGCACAAAAAG+TGG - chr4_2:8793192-8793211 Msa0587310:intron 40.0%
AACAGATTGCGTTACTGGAT+TGG - chr4_2:8793227-8793246 Msa0587310:intron 40.0%
! TTCACGAAATGGATTCCGAT+TGG - chr4_2:8793302-8793321 Msa0587310:intron 40.0%
CTGTATTATGAACTCTTGGG+TGG - chr4_2:8793426-8793445 Msa0587310:CDS 40.0%
!! TTACGAGGTATTGAATCAGC+TGG + chr4_2:8793475-8793494 None:intergenic 40.0%
TGAGCTTATGCATGTGTAAC+TGG - chr4_2:8793658-8793677 Msa0587310:CDS 40.0%
TGTATGCTGCATTCAATGCT+TGG - chr4_2:8793693-8793712 Msa0587310:CDS 40.0%
GAGACCAGTTTCTTCCAATT+GGG + chr4_2:8793951-8793970 None:intergenic 40.0%
AGAGACCAGTTTCTTCCAAT+TGG + chr4_2:8793952-8793971 None:intergenic 40.0%
!! TTTACTTCTGTGGGTTGGTT+TGG - chr4_2:8794191-8794210 Msa0587310:intron 40.0%
!! TTACTTCTGTGGGTTGGTTT+GGG - chr4_2:8794192-8794211 Msa0587310:intron 40.0%
GGTATCAGAGCTATTGTAGT+TGG - chr4_2:8794405-8794424 Msa0587310:intron 40.0%
GAAAATGTGGGTGAAATGGT+TGG + chr4_2:8794455-8794474 None:intergenic 40.0%
AACCGAAAATGTGGGTGAAA+TGG + chr4_2:8794459-8794478 None:intergenic 40.0%
CAGGTACTAAACCGAAAATG+TGG + chr4_2:8794468-8794487 None:intergenic 40.0%
CACATCCTATCATCCTCAAA+CGG + chr4_2:8794545-8794564 None:intergenic 40.0%
ACAGAATTATTCAAGCTCGC+AGG + chr4_2:8794586-8794605 None:intergenic 40.0%
CAAGAAGTAGTCAGATTGCA+CGG + chr4_2:8794664-8794683 None:intergenic 40.0%
GCAATCTGACTACTTCTTGA+AGG - chr4_2:8794665-8794684 Msa0587310:intron 40.0%
TACTTCTTGAAGGAAGACCT+CGG - chr4_2:8794675-8794694 Msa0587310:intron 40.0%
!! GCCACAGTTTTGGCATTAAA+TGG - chr4_2:8794697-8794716 Msa0587310:intron 40.0%
GCATTAAATGGATGACCAAG+AGG - chr4_2:8794709-8794728 Msa0587310:intron 40.0%
!! CTATTCTTGTTGTAGTGGAC+AGG + chr4_2:8794759-8794778 None:intergenic 40.0%
! GGACACTATTCTTGTTGTAG+TGG + chr4_2:8794764-8794783 None:intergenic 40.0%
AATGTCTGTCCATACTTGAG+TGG - chr4_2:8794825-8794844 Msa0587310:intron 40.0%
ATGTCTGTCCATACTTGAGT+GGG - chr4_2:8794826-8794845 Msa0587310:intron 40.0%
TTCCTATTCCCACTCAAGTA+TGG + chr4_2:8794837-8794856 None:intergenic 40.0%
ATACTTGAGTGGGAATAGGA+AGG - chr4_2:8794836-8794855 Msa0587310:intron 40.0%
TACTTGAGTGGGAATAGGAA+GGG - chr4_2:8794837-8794856 Msa0587310:intron 40.0%
CATACCATCCCAATAAACCA+AGG - chr4_2:8794948-8794967 Msa0587310:intron 40.0%
ATTGGGAGCCTTGGTTTATT+GGG + chr4_2:8794959-8794978 None:intergenic 40.0%
TTCCGCACTTACAAACGATT+GGG + chr4_2:8794976-8794995 None:intergenic 40.0%
TTTCCGCACTTACAAACGAT+TGG + chr4_2:8794977-8794996 None:intergenic 40.0%
AAGTGCGGAAAAATCCAGAA+TGG - chr4_2:8794986-8795005 Msa0587310:intron 40.0%
AAAGATTCCAACACTTCTCC+GGG + chr4_2:8795037-8795056 None:intergenic 40.0%
CAAAGATTCCAACACTTCTC+CGG + chr4_2:8795038-8795057 None:intergenic 40.0%
!! AAGGGAAGTTAGTCTTACCT+CGG + chr4_2:8795068-8795087 None:intergenic 40.0%
GTATAGTTTGGATGAGTGGT+AGG - chr4_2:8795114-8795133 Msa0587310:intron 40.0%
TTGTAATGGCTGTGCAGAAA+TGG + chr4_2:8795437-8795456 None:intergenic 40.0%
GGAACTTATGGCGATTGTAA+TGG + chr4_2:8795451-8795470 None:intergenic 40.0%
!! GGTTGGCTTAAAAATGCAAC+TGG - chr4_2:8795510-8795529 Msa0587310:intron 40.0%
ATCATTGAGACTGATGCTTC+CGG + chr4_2:8795573-8795592 None:intergenic 40.0%
GCATCAGTCTCAATGATGAA+AGG - chr4_2:8795576-8795595 Msa0587310:intron 40.0%
! AGACGATTTGTTCGCGATTA+TGG + chr4_2:8795738-8795757 None:intergenic 40.0%
TATTTCAGCACAAGGAGTAG+CGG + chr4_2:8795853-8795872 None:intergenic 40.0%
ACTCAAAGAACACCAGTTAG+TGG + chr4_2:8795931-8795950 None:intergenic 40.0%
GTATAGCTAAAACAGCTCCA+AGG - chr4_2:8795949-8795968 Msa0587310:intron 40.0%
!! AGGTATTACGGCCTTATTTG+AGG + chr4_2:8796043-8796062 None:intergenic 40.0%
ATCAAAGCCTGAAAAGTGGA+TGG - chr4_2:8796068-8796087 Msa0587310:intron 40.0%
GAATGTCTTCGATCCTCATA+CGG - chr4_2:8796162-8796181 Msa0587310:intron 40.0%
CTGGTTAAGAAGAAAGATGG+TGG + chr4_2:8796335-8796354 None:intergenic 40.0%
CTATTCAAGTCCTGTCATAC+TGG + chr4_2:8796354-8796373 None:intergenic 40.0%
CAGTATGACAGGACTTGAAT+AGG - chr4_2:8796352-8796371 Msa0587310:intron 40.0%
CTTGAATAGGGACTGATACT+TGG - chr4_2:8796365-8796384 Msa0587310:intron 40.0%
! TGATAATGTGGGTACCTGTA+TGG - chr4_2:8796443-8796462 Msa0587310:intron 40.0%
GAGGTCTTTCAAGAGTTTGA+AGG + chr4_2:8796539-8796558 None:intergenic 40.0%
AACAGTATGTTGTTCCCCAA+TGG + chr4_2:8796589-8796608 None:intergenic 40.0%
TCAAAGTTCCCACACAAACA+GGG + chr4_2:8796743-8796762 None:intergenic 40.0%
! ATGGAATGATTAGCCCAACT+TGG + chr4_2:8796798-8796817 None:intergenic 40.0%
TGTGGATATTGTTCTCGGTA+TGG + chr4_2:8796817-8796836 None:intergenic 40.0%
GGAAGAAAGATTCCATGTGA+AGG + chr4_2:8796915-8796934 None:intergenic 40.0%
CAATTTCATATCGTCCAGGT+TGG + chr4_2:8796997-8797016 None:intergenic 40.0%
CACACAATTTCATATCGTCC+AGG + chr4_2:8797001-8797020 None:intergenic 40.0%
! TAAACGAACCCTCAAGTTGT+GGG + chr4_2:8797072-8797091 None:intergenic 40.0%
GAAGCCGGAAATACTATACA+TGG - chr4_2:8797097-8797116 Msa0587310:intron 40.0%
TGGATAGTTGCAGGTTATTG+AGG - chr4_2:8797117-8797136 Msa0587310:intron 40.0%
GGATAGTTGCAGGTTATTGA+GGG - chr4_2:8797118-8797137 Msa0587310:intron 40.0%
!! GCAATTCAAGGTGTTGATCA+TGG + chr4_2:8797198-8797217 None:intergenic 40.0%
ATGCCCCAATAAGCAATTCA+AGG + chr4_2:8797210-8797229 None:intergenic 40.0%
! TGTGATGAGAGATTTTCTCC+AGG + chr4_2:8797239-8797258 None:intergenic 40.0%
! AACTAGCTTAGCCGAATTGA+TGG + chr4_2:8797534-8797553 None:intergenic 40.0%
AATTCGGCTAAGCTAGTTAC+CGG - chr4_2:8797536-8797555 Msa0587310:intron 40.0%
AGGCCCATCAACAATTCATA+CGG - chr4_2:8797701-8797720 Msa0587310:intron 40.0%
TTGTTCTCCAAATCCTACCT+GGG + chr4_2:8797780-8797799 None:intergenic 40.0%
TTTGTTCTCCAAATCCTACC+TGG + chr4_2:8797781-8797800 None:intergenic 40.0%
TTGAGGGAGATGATGCATAT+GGG + chr4_2:8797922-8797941 None:intergenic 40.0%
TTTGAGGGAGATGATGCATA+TGG + chr4_2:8797923-8797942 None:intergenic 40.0%
ACAGCAAATGGAACAACGAT+TGG + chr4_2:8798167-8798186 None:intergenic 40.0%
ATGGACCATAAACAGGATGT+AGG - chr4_2:8798192-8798211 Msa0587310:intron 40.0%
CTGATCCTACATCCTGTTTA+TGG + chr4_2:8798200-8798219 None:intergenic 40.0%
CCAAGACTCTCGAATTTCTT+GGG + chr4_2:8798290-8798309 None:intergenic 40.0%
ACCAAGACTCTCGAATTTCT+TGG + chr4_2:8798291-8798310 None:intergenic 40.0%
! GATTGGGATAAAGGATTGGT+AGG + chr4_2:8798350-8798369 None:intergenic 40.0%
TGATTCAGGGATTGGGATAA+AGG + chr4_2:8798359-8798378 None:intergenic 40.0%
! AACCAACTGATTCAGGGATT+GGG + chr4_2:8798366-8798385 None:intergenic 40.0%
! AAACCAACTGATTCAGGGAT+TGG + chr4_2:8798367-8798386 None:intergenic 40.0%
!! TGGGGCTAGATTTTGTTTCT+TGG - chr4_2:8798984-8799003 Msa0587310:intron 40.0%
!! GGGGCTAGATTTTGTTTCTT+GGG - chr4_2:8798985-8799004 Msa0587310:intron 40.0%
GTTTCTTGGGTTTGCCTATA+TGG - chr4_2:8798998-8799017 Msa0587310:intron 40.0%
TTCTTGGGTTTGCCTATATG+GGG - chr4_2:8799000-8799019 Msa0587310:intron 40.0%
!!! GTTTCTAGGGTTTTCCTGAA+AGG - chr4_2:8799112-8799131 Msa0587310:intron 40.0%
!!! TTCTAGGGTTTTCCTGAAAG+GGG - chr4_2:8799114-8799133 Msa0587310:intron 40.0%
AATTCAAGGTAACCCCTTTC+AGG + chr4_2:8799129-8799148 None:intergenic 40.0%
GAAAGGGGTTACCTTGAATT+TGG - chr4_2:8799129-8799148 Msa0587310:intron 40.0%
! GTCTGTGTGCTTGTTCTTTT+TGG - chr4_2:8799399-8799418 Msa0587310:intron 40.0%
AAACAGGGCACAGAAAAAAG+TGG + chr4_2:8799486-8799505 None:intergenic 40.0%
AGCTCAATACAGAAAGATGC+AGG + chr4_2:8799545-8799564 None:intergenic 40.0%
CATGTCAGTTTCACTAGCTA+TGG + chr4_2:8799638-8799657 None:intergenic 40.0%
TAGAAAATGCAATTTGCCGG+TGG + chr4_2:8799689-8799708 None:intergenic 40.0%
AACAGAAAAGCGAAATCACG+AGG + chr4_2:8799784-8799803 None:intergenic 40.0%
CAGTTCTTCCCTAAGAAGAA+AGG - chr4_2:8800041-8800060 Msa0587310:intron 40.0%
!! CTTGGTGTTCCTTTCTTCTT+AGG + chr4_2:8800053-8800072 None:intergenic 40.0%
! AAAGCGATCTCAGGTTTTCT+TGG + chr4_2:8800071-8800090 None:intergenic 40.0%
GAACTTATCTCTTCTCCAGT+TGG + chr4_2:8800101-8800120 None:intergenic 40.0%
GATTCCCAGAATGGTTATTC+AGG + chr4_2:8800145-8800164 None:intergenic 40.0%
ATATGTCAGGATTCCCAGAA+TGG + chr4_2:8800154-8800173 None:intergenic 40.0%
! TCATCTGGTTCAAAGAAGGA+TGG - chr4_2:8800290-8800309 Msa0587310:intron 40.0%
TGAAACTGAAACTCCTTCAG+AGG - chr4_2:8800322-8800341 Msa0587310:intron 40.0%
! AGAAGACTTTCCCTTTTCCT+TGG + chr4_2:8800351-8800370 None:intergenic 40.0%
! ACAGGCGAAACAACATTTTG+AGG - chr4_2:8800518-8800537 Msa0587310:CDS 40.0%
ATAGATGTGTCTTCCACTTC+AGG + chr4_2:8800588-8800607 None:intergenic 40.0%
ACCAGTGAAACAAGTTTCTG+AGG - chr4_2:8800614-8800633 Msa0587310:CDS 40.0%
! TCCTCAGAAACTTGTTTCAC+TGG + chr4_2:8800618-8800637 None:intergenic 40.0%
!! GAAGCTTTGAATGCAGCAAT+AGG - chr4_2:8800636-8800655 Msa0587310:CDS 40.0%
ACCGACAGAAAAACTTCTTG+AGG - chr4_2:8800693-8800712 Msa0587310:CDS 40.0%
ATCGATATTTCTTCCACTCG+AGG + chr4_2:8800763-8800782 None:intergenic 40.0%
TCGAGTGGAAGAAATATCGA+TGG - chr4_2:8800762-8800781 Msa0587310:CDS 40.0%
AGTGGAAGAAATATCGATGG+CGG - chr4_2:8800765-8800784 Msa0587310:CDS 40.0%
TGTTGAAAAACTATCAGGGG+AGG - chr4_2:8800831-8800850 Msa0587310:exon 40.0%
TGAATTGGAAAAGCCTCAAG+TGG - chr4_2:8800888-8800907 Msa0587310:five_prime_UTR 40.0%
ACAGATGTTTCTTCCACTTG+AGG + chr4_2:8800904-8800923 None:intergenic 40.0%
TCAAGTGGAAGAAACATCTG+TGG - chr4_2:8800903-8800922 Msa0587310:five_prime_UTR 40.0%
ACAACTTTCTGTGGAAGCTT+TGG - chr4_2:8800939-8800958 Msa0587310:five_prime_UTR 40.0%
AAACCCAAAGAGGAAGAACA+AGG - chr4_2:8800979-8800998 Msa0587310:five_prime_UTR 40.0%
GAATCCTTGTTCTTCCTCTT+TGG + chr4_2:8800986-8801005 None:intergenic 40.0%
AACAAGGATTCCATCGCAAA+TGG - chr4_2:8800995-8801014 Msa0587310:five_prime_UTR 40.0%
AGTTACAAGCAGGAGAAATC+CGG - chr4_2:8801031-8801050 Msa0587310:five_prime_UTR 40.0%
!! GTTTGCTTTTCATCACTTGC+TGG + chr4_2:8801130-8801149 None:intergenic 40.0%
TGTCTATGAAATCCGGTGGA+TGG + chr4_2:8792673-8792692 None:intergenic 45.0%
GAGGCAGCCTTACTACAAAA+AGG + chr4_2:8792856-8792875 None:intergenic 45.0%
TTGAAGACCGCCTCTACTAA+GGG + chr4_2:8792892-8792911 None:intergenic 45.0%
ATTGAAGACCGCCTCTACTA+AGG + chr4_2:8792893-8792912 None:intergenic 45.0%
TTAGTAGAGGCGGTCTTCAA+TGG - chr4_2:8792892-8792911 Msa0587310:CDS 45.0%
CAATGGAGCTATTCACTGGT+TGG - chr4_2:8792909-8792928 Msa0587310:CDS 45.0%
!! GGTTATGGTGGACGAGTATA+CGG - chr4_2:8793077-8793096 Msa0587310:intron 45.0%
TACAGGGGAAACACCATCAA+TGG + chr4_2:8793178-8793197 None:intergenic 45.0%
GTTGGAACAGATTGCGTTAC+TGG - chr4_2:8793222-8793241 Msa0587310:intron 45.0%
AGTCTTTGCTTTCACTCCCA+TGG - chr4_2:8793337-8793356 Msa0587310:intron 45.0%
GCTCTACTTGTTTGTGCCAT+GGG + chr4_2:8793356-8793375 None:intergenic 45.0%
TGCTCTACTTGTTTGTGCCA+TGG + chr4_2:8793357-8793376 None:intergenic 45.0%
TCCTCCCAATTGGAAGAAAC+TGG - chr4_2:8793944-8793963 Msa0587310:intron 45.0%
ACCAGTTTCTTCCAATTGGG+AGG + chr4_2:8793948-8793967 None:intergenic 45.0%
CTTAACTACTTGGGCCCTTT+GGG + chr4_2:8794101-8794120 None:intergenic 45.0%
GGGGAATACAGATCATTCAG+TGG - chr4_2:8794167-8794186 Msa0587310:intron 45.0%
!! GTGGTTTTACTTCTGTGGGT+TGG - chr4_2:8794186-8794205 Msa0587310:intron 45.0%
TCCTATCATCCTCAAACGGA+TGG + chr4_2:8794541-8794560 None:intergenic 45.0%
GGATGTGCTGAACTTAAGCT+TGG - chr4_2:8794558-8794577 Msa0587310:intron 45.0%
GTCCATACTTGAGTGGGAAT+AGG - chr4_2:8794832-8794851 Msa0587310:intron 45.0%
ACTTGAGTGGGAATAGGAAG+GGG - chr4_2:8794838-8794857 Msa0587310:intron 45.0%
TATCAGACCTTATCTCCTGC+AGG + chr4_2:8794874-8794893 None:intergenic 45.0%
GATTGGGAGCCTTGGTTTAT+TGG + chr4_2:8794960-8794979 None:intergenic 45.0%
TTACAAACGATTGGGAGCCT+TGG + chr4_2:8794968-8794987 None:intergenic 45.0%
CTCCCAATCGTTTGTAAGTG+CGG - chr4_2:8794971-8794990 Msa0587310:intron 45.0%
AAATCCAGAATGGCCACCAA+CGG - chr4_2:8794996-8795015 Msa0587310:intron 45.0%
GAATATCACTCTTCACCCGT+TGG + chr4_2:8795015-8795034 None:intergenic 45.0%
! TGATATTCCCGGAGAAGTGT+TGG - chr4_2:8795027-8795046 Msa0587310:intron 45.0%
!! AGGGAAGTTAGTCTTACCTC+GGG + chr4_2:8795067-8795086 None:intergenic 45.0%
CATGGTGCATTTCACAGACA+TGG + chr4_2:8795208-8795227 None:intergenic 45.0%
CATGTCTGTGAAATGCACCA+TGG - chr4_2:8795206-8795225 Msa0587310:intron 45.0%
TGGGTGAAGACCAATTCAAG+TGG + chr4_2:8795335-8795354 None:intergenic 45.0%
AGATTTCTTCTGAGCCCTGT+CGG - chr4_2:8795482-8795501 Msa0587310:intron 45.0%
GACAGCTCCTAAACCTTTAC+CGG - chr4_2:8795551-8795570 Msa0587310:intron 45.0%
GATGCTTCCGGTAAAGGTTT+AGG + chr4_2:8795561-8795580 None:intergenic 45.0%
AAGTCAGGAACAGTGAGAAG+AGG - chr4_2:8795606-8795625 Msa0587310:intron 45.0%
AGATCTTTGCGGGGATTTCT+AGG + chr4_2:8795777-8795796 None:intergenic 45.0%
TGATTCAATGCTCACTTGGC+CGG + chr4_2:8795814-8795833 None:intergenic 45.0%
GGGCACATTATTTCAGCACA+AGG + chr4_2:8795861-8795880 None:intergenic 45.0%
GTGCTGAAATAATGTGCCCA+AGG - chr4_2:8795862-8795881 Msa0587310:intron 45.0%
AGCCACAGTTGGAATACCTT+GGG + chr4_2:8795881-8795900 None:intergenic 45.0%
TAGCTAAAACAGCTCCAAGG+TGG - chr4_2:8795952-8795971 Msa0587310:intron 45.0%
!! CAATGCACCATCCACTTTTC+AGG + chr4_2:8796078-8796097 None:intergenic 45.0%
CTGAAAAGTGGATGGTGCAT+TGG - chr4_2:8796076-8796095 Msa0587310:intron 45.0%
! ACAGCTTTTCGCACACATGA+AGG + chr4_2:8796137-8796156 None:intergenic 45.0%
TGTGTGCGAAAAGCTGTCTT+AGG - chr4_2:8796140-8796159 Msa0587310:intron 45.0%
CGATCCTCATACGGATTTGA+TGG - chr4_2:8796171-8796190 Msa0587310:intron 45.0%
GCTACCATCAAATCCGTATG+AGG + chr4_2:8796178-8796197 None:intergenic 45.0%
!! GGTTCTGGAATCACATCATG+AGG + chr4_2:8796558-8796577 None:intergenic 45.0%
CAGAACCTCTTTGAGCCATT+GGG - chr4_2:8796571-8796590 Msa0587310:intron 45.0%
AGAACCTCTTTGAGCCATTG+GGG - chr4_2:8796572-8796591 Msa0587310:intron 45.0%
! TTGTGTTGCTGCTGCAGAAT+TGG - chr4_2:8796607-8796626 Msa0587310:intron 45.0%
ACAAAGCCTTACAAGCAGCA+GGG + chr4_2:8796659-8796678 None:intergenic 45.0%
TACAAAGCCTTACAAGCAGC+AGG + chr4_2:8796660-8796679 None:intergenic 45.0%
! AGGGGTGCATGTCTTAAAAG+GGG + chr4_2:8796724-8796743 None:intergenic 45.0%
! CAGGGGTGCATGTCTTAAAA+GGG + chr4_2:8796725-8796744 None:intergenic 45.0%
! ACAGGGGTGCATGTCTTAAA+AGG + chr4_2:8796726-8796745 None:intergenic 45.0%
CAAAGTTCCCACACAAACAG+GGG + chr4_2:8796742-8796761 None:intergenic 45.0%
CTCAAAGTTCCCACACAAAC+AGG + chr4_2:8796744-8796763 None:intergenic 45.0%
GGAGAAATTCGAGCCAACTT+TGG + chr4_2:8796777-8796796 None:intergenic 45.0%
TGGCTCGAATTTCTCCAAGT+TGG - chr4_2:8796781-8796800 Msa0587310:intron 45.0%
GGCTCGAATTTCTCCAAGTT+GGG - chr4_2:8796782-8796801 Msa0587310:intron 45.0%
! CAGCTGGTTCTCAACATTCA+AGG + chr4_2:8796882-8796901 None:intergenic 45.0%
ACTTCCTTCACTGTTGAGGT+GGG + chr4_2:8796942-8796961 None:intergenic 45.0%
AACTTCCTTCACTGTTGAGG+TGG + chr4_2:8796943-8796962 None:intergenic 45.0%
CACAACTTCCTTCACTGTTG+AGG + chr4_2:8796946-8796965 None:intergenic 45.0%
CTCAACAGTGAAGGAAGTTG+TGG - chr4_2:8796944-8796963 Msa0587310:intron 45.0%
AGACATGGGTTTAGCATTGC+AGG + chr4_2:8796970-8796989 None:intergenic 45.0%
!! TCCAGGTTGGTGAAAGACAT+GGG + chr4_2:8796984-8797003 None:intergenic 45.0%
!! GTTCTTGTCTTGGTGGATTG+TGG + chr4_2:8797029-8797048 None:intergenic 45.0%
TGACCACAAGGTTCTTGTCT+TGG + chr4_2:8797039-8797058 None:intergenic 45.0%
AAGATCACCCCACAACTTGA+GGG - chr4_2:8797061-8797080 Msa0587310:intron 45.0%
! AAACGAACCCTCAAGTTGTG+GGG + chr4_2:8797071-8797090 None:intergenic 45.0%
! CTAAACGAACCCTCAAGTTG+TGG + chr4_2:8797073-8797092 None:intergenic 45.0%
GGTTCGTTTAGATGTGAAGC+CGG - chr4_2:8797082-8797101 Msa0587310:intron 45.0%
!! GGTGTTGATCATGGAAGAAG+AGG + chr4_2:8797189-8797208 None:intergenic 45.0%
TTATTGGGGCATATATGGCC+TGG - chr4_2:8797218-8797237 Msa0587310:intron 45.0%
ACAACGGAAACACAAGCCTT+TGG - chr4_2:8797256-8797275 Msa0587310:intron 45.0%
ACAGTGGACACAACGAACAA+AGG + chr4_2:8797404-8797423 None:intergenic 45.0%
TTGTGTCCACTGTAACAGTG+CGG - chr4_2:8797411-8797430 Msa0587310:intron 45.0%
ACTGTATGCTGGACCTCTTA+GGG + chr4_2:8797639-8797658 None:intergenic 45.0%
AACTGTATGCTGGACCTCTT+AGG + chr4_2:8797640-8797659 None:intergenic 45.0%
TAAACAAACCAGTTCCGTCG+AGG + chr4_2:8797681-8797700 None:intergenic 45.0%
!! CGACGGAACTGGTTTGTTTA+AGG - chr4_2:8797681-8797700 Msa0587310:intron 45.0%
! TCAAGGCTGCATTGATCAAG+AGG + chr4_2:8797751-8797770 None:intergenic 45.0%
AATTCCTCCCAGGTAGGATT+TGG - chr4_2:8797770-8797789 Msa0587310:intron 45.0%
TCTCACATGGTATCAGTGGT+GGG + chr4_2:8797807-8797826 None:intergenic 45.0%
AAGCTCTCACATGGTATCAG+TGG + chr4_2:8797811-8797830 None:intergenic 45.0%
TGGAAGGAAAAGCTCTCACA+TGG + chr4_2:8797820-8797839 None:intergenic 45.0%
! TGTGAGAGCTTTTCCTTCCA+TGG - chr4_2:8797820-8797839 Msa0587310:intron 45.0%
AGAAAAGATTCAGGCCGCTA+TGG + chr4_2:8797849-8797868 None:intergenic 45.0%
GCATCATCTCCCTCAAACAT+AGG - chr4_2:8797926-8797945 Msa0587310:intron 45.0%
AATTTCCGCCATTTGTCCTC+CGG - chr4_2:8797956-8797975 Msa0587310:intron 45.0%
TTAACAGTGCGAGCAGATTC+AGG + chr4_2:8798013-8798032 None:intergenic 45.0%
ACGCAGATTTGACGAACTTC+TGG + chr4_2:8798050-8798069 None:intergenic 45.0%
GGAATTGCGACAAATCTTGG+AGG + chr4_2:8798092-8798111 None:intergenic 45.0%
GCAATTCCTTTACCTCATCG+CGG - chr4_2:8798104-8798123 Msa0587310:intron 45.0%
CAATTCCTTTACCTCATCGC+GGG - chr4_2:8798105-8798124 Msa0587310:intron 45.0%
!! GTTCCATTTGCTGTCGTGTA+TGG - chr4_2:8798173-8798192 Msa0587310:intron 45.0%
GTCGTGTATGGACCATAAAC+AGG - chr4_2:8798185-8798204 Msa0587310:intron 45.0%
CCCAAGAAATTCGAGAGTCT+TGG - chr4_2:8798287-8798306 Msa0587310:intron 45.0%
AAGCTCTCGAATTCTTGGAG+GGG + chr4_2:8798319-8798338 None:intergenic 45.0%
CAAGCTCTCGAATTCTTGGA+GGG + chr4_2:8798320-8798339 None:intergenic 45.0%
AGACCAAGCTCTCGAATTCT+TGG + chr4_2:8798324-8798343 None:intergenic 45.0%
CAGGGATTGGGATAAAGGAT+TGG + chr4_2:8798354-8798373 None:intergenic 45.0%
ATCCCAATCCCTGAATCAGT+TGG - chr4_2:8798361-8798380 Msa0587310:intron 45.0%
ACAAGCACACAGACCACAAA+TGG + chr4_2:8799393-8799412 None:intergenic 45.0%
TTCTGTGCCCTGTTTGATTC+AGG - chr4_2:8799491-8799510 Msa0587310:intron 45.0%
CTTCTTAGGGAAGAACTGCA+TGG + chr4_2:8800039-8800058 None:intergenic 45.0%
TCAGAGTTTGATTGGGGAAC+CGG - chr4_2:8800173-8800192 Msa0587310:intron 45.0%
! CTAATCCTTGATGATCGCCT+TGG + chr4_2:8800206-8800225 None:intergenic 45.0%
TTTCGACTACGTTTCTTCGG+AGG + chr4_2:8800269-8800288 None:intergenic 45.0%
TGGTTCAAAGAAGGATGGCA+AGG - chr4_2:8800295-8800314 Msa0587310:intron 45.0%
! TTTTCCTTGGCTTCCTCTGA+AGG + chr4_2:8800338-8800357 None:intergenic 45.0%
TTCAGAGGAAGCCAAGGAAA+AGG - chr4_2:8800337-8800356 Msa0587310:intron 45.0%
TCAGAGGAAGCCAAGGAAAA+GGG - chr4_2:8800338-8800357 Msa0587310:intron 45.0%
TCGACGTTATCAGCATCACT+GGG + chr4_2:8800395-8800414 None:intergenic 45.0%
ATCGACGTTATCAGCATCAC+TGG + chr4_2:8800396-8800415 None:intergenic 45.0%
!! TTCCAGTTGCGGTTTTTCAG+CGG + chr4_2:8800562-8800581 None:intergenic 45.0%
! ACTTCAGGCTTTTCCAGTTG+CGG + chr4_2:8800573-8800592 None:intergenic 45.0%
GCAATAGGAAAATCCTCGAG+TGG - chr4_2:8800651-8800670 Msa0587310:CDS 45.0%
ATCAATGTGTCTTCCACTCG+AGG + chr4_2:8800667-8800686 None:intergenic 45.0%
TCGAGTGGAAGACACATTGA+TGG - chr4_2:8800666-8800685 Msa0587310:CDS 45.0%
TGTCACTGAAAAGCCGCAAT+TGG - chr4_2:8800732-8800751 Msa0587310:CDS 45.0%
! ACTCGAGGCTTTTCCAATTG+CGG + chr4_2:8800748-8800767 None:intergenic 45.0%
!! AGAAATATCGATGGCGGAAC+CGG - chr4_2:8800771-8800790 Msa0587310:CDS 45.0%
AGTGGAAGAAACATCTGTGG+CGG - chr4_2:8800906-8800925 Msa0587310:five_prime_UTR 45.0%
TCCACAGAAAGTTGTTCCAC+CGG + chr4_2:8800934-8800953 None:intergenic 45.0%
TGTCGCTGAAAAACCCAAAG+AGG - chr4_2:8800969-8800988 Msa0587310:five_prime_UTR 45.0%
ATCAGCTGTACCATTTGCGA+TGG + chr4_2:8801008-8801027 None:intergenic 45.0%
AGCTGATAGCAGTTACAAGC+AGG - chr4_2:8801021-8801040 Msa0587310:five_prime_UTR 45.0%
!! AATTCATAAATTAAAAAAAA+TGG + chr4_2:8794015-8794034 None:intergenic 5.0%
AACTCTCTGCTCCTCCCAAT+TGG - chr4_2:8793934-8793953 Msa0587310:intron 50.0%
TATGCTAGGCGTAAGCCCAA+AGG - chr4_2:8794083-8794102 Msa0587310:intron 50.0%
ATGCTAGGCGTAAGCCCAAA+GGG - chr4_2:8794084-8794103 Msa0587310:intron 50.0%
GCTTAACTACTTGGGCCCTT+TGG + chr4_2:8794102-8794121 None:intergenic 50.0%
CTAGGCTCTCTAAGTCCTAG+AGG - chr4_2:8794220-8794239 Msa0587310:intron 50.0%
!!! GGTTGGGTTGGGCTGAATTT+TGG + chr4_2:8794438-8794457 None:intergenic 50.0%
GTGGGTGAAATGGTTGGGTT+GGG + chr4_2:8794449-8794468 None:intergenic 50.0%
TGTGGGTGAAATGGTTGGGT+TGG + chr4_2:8794450-8794469 None:intergenic 50.0%
TCAAACGGATGGCCAAACAG+AGG + chr4_2:8794530-8794549 None:intergenic 50.0%
TCTGTTTGGCCATCCGTTTG+AGG - chr4_2:8794529-8794548 Msa0587310:intron 50.0%
GCCATCCGTTTGAGGATGAT+AGG - chr4_2:8794537-8794556 Msa0587310:intron 50.0%
GGTCAGACACAATAGTCGCT+GGG - chr4_2:8794635-8794654 Msa0587310:intron 50.0%
TAATGCCAAAACTGTGGCCG+AGG + chr4_2:8794695-8794714 None:intergenic 50.0%
GTGTCCTTACCTTGACTCCT+AGG - chr4_2:8794778-8794797 Msa0587310:intron 50.0%
CTTGCCTAGGAGTCAAGGTA+AGG + chr4_2:8794785-8794804 None:intergenic 50.0%
CAAGAGACCTGCAGGAGATA+AGG - chr4_2:8794864-8794883 Msa0587310:intron 50.0%
GGAGCCTTGGTTTATTGGGA+TGG + chr4_2:8794955-8794974 None:intergenic 50.0%
AATCCAGAATGGCCACCAAC+GGG - chr4_2:8794997-8795016 Msa0587310:intron 50.0%
TATCACTCTTCACCCGTTGG+TGG + chr4_2:8795012-8795031 None:intergenic 50.0%
CGGGTGAAGAGTGATATTCC+CGG - chr4_2:8795016-8795035 Msa0587310:intron 50.0%
! GGAATCTTTGATGATCCCCG+AGG - chr4_2:8795048-8795067 Msa0587310:intron 50.0%
!! GGGAAGTTAGTCTTACCTCG+GGG + chr4_2:8795066-8795085 None:intergenic 50.0%
GAAATGCACCATGGAGACAG+CGG - chr4_2:8795215-8795234 Msa0587310:intron 50.0%
GTAGGTCATACGACGGGATA+AGG - chr4_2:8795239-8795258 Msa0587310:intron 50.0%
AAGCCAACCACTATCCGACA+GGG + chr4_2:8795499-8795518 None:intergenic 50.0%
TAAGCCAACCACTATCCGAC+AGG + chr4_2:8795500-8795519 None:intergenic 50.0%
! CTGGTCTTCCTTGTTGCATG+AGG - chr4_2:8795529-8795548 Msa0587310:intron 50.0%
GAGACTGATGCTTCCGGTAA+AGG + chr4_2:8795567-8795586 None:intergenic 50.0%
GAGAAGAGGCAAATCAGCCA+TGG - chr4_2:8795620-8795639 Msa0587310:intron 50.0%
! TGCCCAAGGTATTCCAACTG+TGG - chr4_2:8795876-8795895 Msa0587310:intron 50.0%
CAGCCACAGTTGGAATACCT+TGG + chr4_2:8795882-8795901 None:intergenic 50.0%
! CAAGGTATTCCAACTGTGGC+TGG - chr4_2:8795880-8795899 Msa0587310:intron 50.0%
GATGATCACAAGAGCCACCT+TGG + chr4_2:8795969-8795988 None:intergenic 50.0%
! GGTGCATTGGTGAGACCAAA+AGG - chr4_2:8796089-8796108 Msa0587310:intron 50.0%
! TGGTGGATGGAGATTCTGTG+TGG + chr4_2:8796318-8796337 None:intergenic 50.0%
TACCTGTATGGTCGCAGGTT+GGG - chr4_2:8796455-8796474 Msa0587310:intron 50.0%
CCAATGGCTCAAAGAGGTTC+TGG + chr4_2:8796573-8796592 None:intergenic 50.0%
CCAGAACCTCTTTGAGCCAT+TGG - chr4_2:8796570-8796589 Msa0587310:intron 50.0%
TGTTCCCCAATGGCTCAAAG+AGG + chr4_2:8796579-8796598 None:intergenic 50.0%
CAAAGCCTTACAAGCAGCAG+GGG + chr4_2:8796658-8796677 None:intergenic 50.0%
GCAACTGCTCTTGACAACGT+GGG - chr4_2:8796696-8796715 Msa0587310:intron 50.0%
ACATGCACCCCTGTTTGTGT+GGG - chr4_2:8796732-8796751 Msa0587310:intron 50.0%
TTCACTGTTGAGGTGGGAGA+TGG + chr4_2:8796936-8796955 None:intergenic 50.0%
ATCTCCCACCTCAACAGTGA+AGG - chr4_2:8796935-8796954 Msa0587310:intron 50.0%
ACCCATGTCTTTCACCAACC+TGG - chr4_2:8796980-8796999 Msa0587310:intron 50.0%
!! GTCCAGGTTGGTGAAAGACA+TGG + chr4_2:8796985-8797004 None:intergenic 50.0%
CCACAAGGTTCTTGTCTTGG+TGG + chr4_2:8797036-8797055 None:intergenic 50.0%
CCACCAAGACAAGAACCTTG+TGG - chr4_2:8797033-8797052 Msa0587310:intron 50.0%
! GGGTGATCTTGATGACCACA+AGG + chr4_2:8797051-8797070 None:intergenic 50.0%
CAAGATCACCCCACAACTTG+AGG - chr4_2:8797060-8797079 Msa0587310:intron 50.0%
CCTGCAACAAACACTACAGC+AGG + chr4_2:8797368-8797387 None:intergenic 50.0%
! CCTGCTGTAGTGTTTGTTGC+AGG - chr4_2:8797365-8797384 Msa0587310:intron 50.0%
TCCACTGTAACAGTGCGGTT+GGG - chr4_2:8797416-8797435 Msa0587310:intron 50.0%
GCAGAGCCTGAGTATCTCAA+AGG + chr4_2:8797614-8797633 None:intergenic 50.0%
GCTCAGTTCGAACTGTATGC+TGG + chr4_2:8797650-8797669 None:intergenic 50.0%
!! ATACGGACTTTGGAGCATCG+AGG - chr4_2:8797718-8797737 Msa0587310:intron 50.0%
!! TACGGACTTTGGAGCATCGA+GGG - chr4_2:8797719-8797738 Msa0587310:intron 50.0%
TCCTACCTGGGAGGAATTCA+AGG + chr4_2:8797768-8797787 None:intergenic 50.0%
TTCTCCAAATCCTACCTGGG+AGG + chr4_2:8797777-8797796 None:intergenic 50.0%
CTCTCACATGGTATCAGTGG+TGG + chr4_2:8797808-8797827 None:intergenic 50.0%
AAAGATTCAGGCCGCTATGG+TGG + chr4_2:8797846-8797865 None:intergenic 50.0%
AGGGAGATGATGCATATGGG+TGG + chr4_2:8797919-8797938 None:intergenic 50.0%
TTCGCAATCCGGAGGACAAA+TGG + chr4_2:8797967-8797986 None:intergenic 50.0%
!! TGGTTCTGGCATTCGCAATC+CGG + chr4_2:8797978-8797997 None:intergenic 50.0%
GATTCAGGTGACACTGGTAG+TGG + chr4_2:8797998-8798017 None:intergenic 50.0%
! TTTTGTAGCAACCCGCGATG+AGG + chr4_2:8798119-8798138 None:intergenic 50.0%
GGTCCATACACGACAGCAAA+TGG + chr4_2:8798179-8798198 None:intergenic 50.0%
CCAAGCTCTCGAATTCTTGG+AGG + chr4_2:8798321-8798340 None:intergenic 50.0%
CCTCCAAGAATTCGAGAGCT+TGG - chr4_2:8798318-8798337 Msa0587310:intron 50.0%
ACCGGCACTCCATATTGAAC+TGG - chr4_2:8799817-8799836 Msa0587310:intron 50.0%
CCCAGTTCAATATGGAGTGC+CGG + chr4_2:8799821-8799840 None:intergenic 50.0%
CCGGCACTCCATATTGAACT+GGG - chr4_2:8799818-8799837 Msa0587310:intron 50.0%
CGGCACTCCATATTGAACTG+GGG - chr4_2:8799819-8799838 Msa0587310:intron 50.0%
GGCACTCCATATTGAACTGG+GGG - chr4_2:8799820-8799839 Msa0587310:intron 50.0%
GCACTCCATATTGAACTGGG+GGG - chr4_2:8799821-8799840 Msa0587310:intron 50.0%
TCGAACCCCCCAGTTCAATA+TGG + chr4_2:8799829-8799848 None:intergenic 50.0%
ATATTGAACTGGGGGGTTCG+AGG - chr4_2:8799828-8799847 Msa0587310:intron 50.0%
ATCGCTTTCGTTGCTCCAAC+TGG - chr4_2:8800083-8800102 Msa0587310:intron 50.0%
AGACACCAAGGCGATCATCA+AGG - chr4_2:8800198-8800217 Msa0587310:intron 50.0%
AACTCCTTCAGAGGAAGCCA+AGG - chr4_2:8800331-8800350 Msa0587310:intron 50.0%
GACTGCTGAGAAACCTCAAG+TGG - chr4_2:8800478-8800497 Msa0587310:CDS 50.0%
CCACTGATGTCTTCCACTTG+AGG + chr4_2:8800494-8800513 None:intergenic 50.0%
CCTCAAGTGGAAGACATCAG+TGG - chr4_2:8800491-8800510 Msa0587310:CDS 50.0%
GAAGACATCAGTGGCAGAAC+AGG - chr4_2:8800500-8800519 Msa0587310:CDS 50.0%
GCAACTGGAAAAGCCTGAAG+TGG - chr4_2:8800572-8800591 Msa0587310:CDS 50.0%
GCAATTGGAAAAGCCTCGAG+TGG - chr4_2:8800747-8800766 Msa0587310:CDS 50.0%
! AGAAACATCTGTGGCGGAAC+CGG - chr4_2:8800912-8800931 Msa0587310:five_prime_UTR 50.0%
ACCGGTGGAACAACTTTCTG+TGG - chr4_2:8800930-8800949 Msa0587310:five_prime_UTR 50.0%
!! GGGTTGGTTTGGGAGAGACT+AGG - chr4_2:8794202-8794221 Msa0587310:intron 55.0%
CGGTCAGACACAATAGTCGC+TGG - chr4_2:8794634-8794653 Msa0587310:intron 55.0%
! GAAGACCTCGGCCACAGTTT+TGG - chr4_2:8794687-8794706 Msa0587310:intron 55.0%
GAAGGCTTGCCTAGGAGTCA+AGG + chr4_2:8794790-8794809 None:intergenic 55.0%
TGGTCGCGAGAATCGAGTAG+CGG + chr4_2:8795268-8795287 None:intergenic 55.0%
TTCTGAGCCCTGTCGGATAG+TGG - chr4_2:8795489-8795508 Msa0587310:intron 55.0%
GGAGCTGTCCTCATGCAACA+AGG + chr4_2:8795540-8795559 None:intergenic 55.0%
! CGGGGATTTCTAGGTCTCAC+AGG + chr4_2:8795768-8795787 None:intergenic 55.0%
CACATTTGGCCAGCCACAGT+TGG + chr4_2:8795892-8795911 None:intergenic 55.0%
GTACCTGTATGGTCGCAGGT+TGG - chr4_2:8796454-8796473 Msa0587310:intron 55.0%
TTCCCAACCTGCGACCATAC+AGG + chr4_2:8796460-8796479 None:intergenic 55.0%
TTGAAGGGTTGCCACCTGCA+AGG + chr4_2:8796523-8796542 None:intergenic 55.0%
CCTTACAAGCAGCAGGGGAA+AGG + chr4_2:8796653-8796672 None:intergenic 55.0%
! CCTTTCCCCTGCTGCTTGTA+AGG - chr4_2:8796650-8796669 Msa0587310:intron 55.0%
GGCAACTGCTCTTGACAACG+TGG - chr4_2:8796695-8796714 Msa0587310:intron 55.0%
GACATGCACCCCTGTTTGTG+TGG - chr4_2:8796731-8796750 Msa0587310:intron 55.0%
TGCTGACACACCCCTTCACA+TGG - chr4_2:8796900-8796919 Msa0587310:intron 55.0%
ACTACAGCAGGTGACACCAG+TGG + chr4_2:8797356-8797375 None:intergenic 55.0%
GTCCACTGTAACAGTGCGGT+TGG - chr4_2:8797415-8797434 Msa0587310:intron 55.0%
ACCCAACCGCACTGTTACAG+TGG + chr4_2:8797420-8797439 None:intergenic 55.0%
ACTGTAACAGTGCGGTTGGG+TGG - chr4_2:8797419-8797438 Msa0587310:intron 55.0%
TTTGGGTGTGTGCAGTCCCT+TGG - chr4_2:8797468-8797487 Msa0587310:intron 55.0%
GTATGCTGGACCTCTTAGGG+CGG + chr4_2:8797636-8797655 None:intergenic 55.0%
CTGAGCTCTGTACTCCTCGA+CGG - chr4_2:8797664-8797683 Msa0587310:intron 55.0%
TCTGTACTCCTCGACGGAAC+TGG - chr4_2:8797670-8797689 Msa0587310:intron 55.0%
!! GACTTTGGAGCATCGAGGGT+TGG - chr4_2:8797723-8797742 Msa0587310:intron 55.0%
TGCAGCCTTGAATTCCTCCC+AGG - chr4_2:8797760-8797779 Msa0587310:intron 55.0%
GCCTTGAATTCCTCCCAGGT+AGG - chr4_2:8797764-8797783 Msa0587310:intron 55.0%
TCCTTCCATGGCCACCATAG+CGG - chr4_2:8797832-8797851 Msa0587310:intron 55.0%
GCAATCCGGAGGACAAATGG+CGG + chr4_2:8797964-8797983 None:intergenic 55.0%
TTCTGGCATTCGCAATCCGG+AGG + chr4_2:8797975-8797994 None:intergenic 55.0%
!! GGTGACACTGGTAGTGGTTC+TGG + chr4_2:8797992-8798011 None:intergenic 55.0%
CGAGCAGATTCAGGTGACAC+TGG + chr4_2:8798004-8798023 None:intergenic 55.0%
! AACTTCTGGAAACCGTCCGC+GGG + chr4_2:8798036-8798055 None:intergenic 55.0%
! GAACTTCTGGAAACCGTCCG+CGG + chr4_2:8798037-8798056 None:intergenic 55.0%
AGCAACCCGCGATGAGGTAA+AGG + chr4_2:8798113-8798132 None:intergenic 55.0%
GGAGCAACGAAAGCGATCTC+AGG + chr4_2:8800080-8800099 None:intergenic 55.0%
!!! TGCAGGTGGTGGGGTTGTTT+TGG + chr4_2:8800237-8800256 None:intergenic 55.0%
TGCCGCTGAAAAACCGCAAC+TGG - chr4_2:8800557-8800576 Msa0587310:CDS 55.0%
! TCCTTCGTTTTCCTCTGCGC+CGG + chr4_2:8801053-8801072 None:intergenic 55.0%
AGGGGTTGCAAGAGACCTGC+AGG - chr4_2:8794856-8794875 Msa0587310:intron 60.0%
!! TCACCCGTTGGTGGCCATTC+TGG + chr4_2:8795003-8795022 None:intergenic 60.0%
CAGCGGCGTAGGTCATACGA+CGG - chr4_2:8795232-8795251 Msa0587310:intron 60.0%
AGCGGCGTAGGTCATACGAC+GGG - chr4_2:8795233-8795252 Msa0587310:intron 60.0%
GCTACTCGATTCTCGCGACC+AGG - chr4_2:8795267-8795286 Msa0587310:intron 60.0%
! GAGCCCTGTCGGATAGTGGT+TGG - chr4_2:8795493-8795512 Msa0587310:intron 60.0%
GTGGGTACCTGTATGGTCGC+AGG - chr4_2:8796450-8796469 Msa0587310:intron 60.0%
GCATGGTCATGGGTCCTTGC+AGG - chr4_2:8796506-8796525 Msa0587310:intron 60.0%
TGGTCATGGGTCCTTGCAGG+TGG - chr4_2:8796509-8796528 Msa0587310:intron 60.0%
! TGAAGGGGTGTGTCAGCAGC+TGG + chr4_2:8796898-8796917 None:intergenic 60.0%
CTGCTCGCACTGTTAACCCG+CGG - chr4_2:8798017-8798036 Msa0587310:intron 60.0%
TCGCACTGTTAACCCGCGGA+CGG - chr4_2:8798021-8798040 Msa0587310:intron 60.0%
!! TGATCGCCTTGGTGTCTCGC+CGG + chr4_2:8800195-8800214 None:intergenic 60.0%
CTCAGCTTGTGCAGGTGGTG+GGG + chr4_2:8800246-8800265 None:intergenic 60.0%
GCTCAGCTTGTGCAGGTGGT+GGG + chr4_2:8800247-8800266 None:intergenic 60.0%
TTCGGAGGCTCAGCTTGTGC+AGG + chr4_2:8800254-8800273 None:intergenic 60.0%
!! AGGGGAGGCACCAGTTGAGT+TGG - chr4_2:8800846-8800865 Msa0587310:five_prime_UTR 60.0%
! AACATCTGTGGCGGAACCGG+TGG - chr4_2:8800915-8800934 Msa0587310:five_prime_UTR 60.0%
TCCGGCGCAGAGGAAAACGA+AGG - chr4_2:8801049-8801068 Msa0587310:five_prime_UTR 60.0%
CACCATGGAGACAGCGGCGT+AGG - chr4_2:8795221-8795240 Msa0587310:intron 65.0%
GACCTACGCCGCTGTCTCCA+TGG + chr4_2:8795226-8795245 None:intergenic 65.0%
TCAGGCTCTGCCGCCCTAAG+AGG - chr4_2:8797623-8797642 Msa0587310:intron 65.0%
GCCGCTATGGTGGCCATGGA+AGG + chr4_2:8797836-8797855 None:intergenic 65.0%
TCAGGCCGCTATGGTGGCCA+TGG + chr4_2:8797840-8797859 None:intergenic 65.0%
GGCTCAGCTTGTGCAGGTGG+TGG + chr4_2:8800248-8800267 None:intergenic 65.0%
GGAGGCTCAGCTTGTGCAGG+TGG + chr4_2:8800251-8800270 None:intergenic 65.0%
GCAGGAGAAATCCGGCGCAG+AGG - chr4_2:8801039-8801058 Msa0587310:five_prime_UTR 65.0%
GGGGAACCGGCGAGACACCA+AGG - chr4_2:8800186-8800205 Msa0587310:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 8792598 8801219 8792598 ID=Msa0587310;Name=Msa0587310
chr4_2 mRNA 8792598 8801219 8792598 ID=Msa0587310-mRNA-1;Parent=Msa0587310;Name=Msa0587310-mRNA-1;_AED=0.14;_eAED=0.15;_QI=381|0.66|0.5|1|0.33|0.25|4|0|452
chr4_2 exon 8792598 8793086 8792598 ID=Msa0587310-mRNA-1:exon:2445;Parent=Msa0587310-mRNA-1
chr4_2 exon 8793375 8793773 8793375 ID=Msa0587310-mRNA-1:exon:2444;Parent=Msa0587310-mRNA-1
chr4_2 exon 8799852 8799923 8799852 ID=Msa0587310-mRNA-1:exon:2443;Parent=Msa0587310-mRNA-1
chr4_2 exon 8800440 8801219 8800440 ID=Msa0587310-mRNA-1:exon:2442;Parent=Msa0587310-mRNA-1
chr4_2 five_prime_UTR 8800839 8801219 8800839 ID=Msa0587310-mRNA-1:five_prime_utr;Parent=Msa0587310-mRNA-1
chr4_2 CDS 8800440 8800838 8800440 ID=Msa0587310-mRNA-1:cds;Parent=Msa0587310-mRNA-1
chr4_2 CDS 8799852 8799923 8799852 ID=Msa0587310-mRNA-1:cds;Parent=Msa0587310-mRNA-1
chr4_2 CDS 8793375 8793773 8793375 ID=Msa0587310-mRNA-1:cds;Parent=Msa0587310-mRNA-1
chr4_2 CDS 8792598 8793086 8792598 ID=Msa0587310-mRNA-1:cds;Parent=Msa0587310-mRNA-1
Gene Sequence

>Msa0587310

ATGGAAAGGAAACTTGTAGAGATTCCTCTCCCAGATGATATTGATTATCGTTCTACGGATTTTGATTTATGGGTATTTAGAGGATTTCTAAGTCTATGGGTTATGGTGGACGAGTATACGGTTGATATATGGGTAATGAAAGAATACAAAGTGCAGTCATCTTGGACTAAAACTCTTGTTCTTACTACTGATGATACCATTGATGGTGTTTCCCCTGTATGTTGCACAAAAAGTGGTGATATTGTTGGAACAGATTGCGTTACTGGATTGGTGAGATATGATGACAAAGGAGAGTTTTTAGAGCATACCAACTATTGCAAAGATTCACGAAATGGATTCCGATTGGCTATGTATACAGAGTCTTTGCTTTCACTCCCATGGCACAAACAAGTAGAGCAAGGTTTTTGTTTTTCTTCTGCTGCTGAAGTCTTGTCTGTTGAACTCTCTGCTCCTCCCAATTGGAAGAAACTGTTCTTCCCTAAGAAGAAAGGAACACCAAGAAAACCTGAGATCGCTTTCGTTGCTCCAACTGGAGAAGAGATAAGTTCCAAAAGACAATTGAAGAAGTACCTGAATAACCATTCTGGGAATCCTGACATATCAGAGTTTGATTGGGGAACCGGCGAGACACCAAGGCGATCATCAAGGATTAGAGAGATTGCCAAAACAACCCCACCACCTGCACAAGCTGAGCCTCCGAAGAAACGTAGTCGAAAATCATCTGGTTCAAAGAAGGATGGCAAGGATACTGAAACTGAAACTCCTTCAGAGGAAGCCAAGGAAAAGGGAAAGTCTTCTGCTGAAGAACTGAAAGCTGATCCCAGTGATGCTGATAACGTCGATGATGAAACAAAGATTGACAATGCAGAGCTGTCACTGAAAAGCCGCAATTGGAAAAGCCTCGAGTGGAAGAAATATCGATGGCGGAACCGGCAGAACAACTTTTTGAGAAATCTTTGGATGCTGTTGTTGTTGAAAAACTATCAGGGGAGGCACCAGTTGAGTTGGAAAAAGAAAATAGTACAGCTGAATTGGAAAAGCCTCAAGTGGAAGAAACATCTGTGGCGGAACCGGTGGAACAACTTTCTGTGGAAGCTTTGGACGCTGTTGTCGCTGAAAAACCCAAAGAGGAAGAACAAGGATTCCATCGCAAATGGTACAGCTGATAGCAGTTACAAGCAGGAGAAATCCGGCGCAGAGGAAAACGAAGGAGCTGAGAAAGTGAGTCTCAATGTTGAAGATATCATTAATGGTAAGAATGAAATTCCAGCAAGTGATGAAAAGCAAACAATTCAAGGTGATGAACAAGTGAAGAAAATGGTTGATAATGAAAGTGTTATTTGGAGCTTTGCTCAATGA
Protein sequence

>Msa0587310

MERKLVEIPLPDDIDYRSTDFDLWVFRGFLSLWVMVDEYTVDIWVMKEYKVQSSWTKTLVLTTDDTIDGVSPVCCTKSGDIVGTDCVTGLVRYDDKGEFLEHTNYCKDSRNGFRLAMYTESLLSLPWHKQVEQGFCFSSAAEVLSVELSAPPNWKKLFFPKKKGTPRKPEIAFVAPTGEEISSKRQLKKYLNNHSGNPDISEFDWGTGETPRRSSRIREIAKTTPPPAQAEPPKKRSRKSSGSKKDGKDTETETPSEEAKEKGKSSAEELKADPSDADNVDDETKIDNAELSLKSRNWKSLEWKKYRWRNRQNNFLRNLWMLLLLKNYQGRHQLSWKKKIVQLNWKSLKWKKHLWRNRWNNFLWKLWTLLSLKNPKRKNKDSIANGTADSSYKQEKSGAEENEGAEKVSLNVEDIINGKNEIPASDEKQTIQGDEQVKKMVDNESVIWSFAQ*