Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592170 | XP_003604990.1 | 96.804 | 219 | 7 | 0 | 1 | 219 | 1 | 219 | 2.24e-156 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592170 | sp|Q9MAS5|VA726_ARATH | 78.995 | 219 | 46 | 0 | 1 | 219 | 1 | 219 | 1.44e-129 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0251920 | Msa0592170 | 0.801003 | 1.105311e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592170 | MtrunA17_Chr4g0010271 | 96.804 | 219 | 7 | 0 | 1 | 219 | 1 | 219 | 2.06e-160 | 442 |
| Msa0592170 | MtrunA17_Chr1g0169861 | 77.626 | 219 | 49 | 0 | 1 | 219 | 51 | 269 | 4.75e-135 | 380 |
| Msa0592170 | MtrunA17_Chr7g0237561 | 82.648 | 219 | 38 | 0 | 1 | 219 | 1 | 219 | 8.62e-127 | 357 |
| Msa0592170 | MtrunA17_Chr2g0296021 | 70.320 | 219 | 65 | 0 | 1 | 219 | 1 | 219 | 1.62e-119 | 338 |
| Msa0592170 | MtrunA17_Chr4g0043521 | 78.756 | 193 | 41 | 0 | 3 | 195 | 5 | 197 | 1.98e-118 | 335 |
| Msa0592170 | MtrunA17_Chr2g0291651 | 73.196 | 194 | 52 | 0 | 2 | 195 | 6 | 199 | 2.58e-112 | 320 |
| Msa0592170 | MtrunA17_Chr7g0237521 | 74.359 | 195 | 50 | 0 | 1 | 195 | 1 | 195 | 1.65e-108 | 310 |
| Msa0592170 | MtrunA17_Chr1g0210521 | 56.723 | 238 | 84 | 1 | 1 | 219 | 1 | 238 | 1.75e-100 | 291 |
| Msa0592170 | MtrunA17_Chr4g0010211 | 94.444 | 108 | 6 | 0 | 64 | 171 | 3 | 110 | 4.86e-71 | 211 |
| Msa0592170 | MtrunA17_Chr1g0169851 | 68.027 | 147 | 32 | 1 | 57 | 188 | 8 | 154 | 5.79e-70 | 211 |
| Msa0592170 | MtrunA17_Chr5g0441741 | 39.151 | 212 | 126 | 3 | 6 | 216 | 3 | 212 | 6.88e-50 | 162 |
| Msa0592170 | MtrunA17_Chr4g0026121 | 35.814 | 215 | 135 | 3 | 5 | 218 | 2 | 214 | 1.74e-46 | 153 |
| Msa0592170 | MtrunA17_Chr4g0064371 | 33.180 | 217 | 136 | 5 | 6 | 216 | 3 | 216 | 2.11e-41 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592170 | AT1G04760.2 | 78.995 | 219 | 46 | 0 | 1 | 219 | 1 | 219 | 1.46e-130 | 367 |
| Msa0592170 | AT1G04760.1 | 78.995 | 219 | 46 | 0 | 1 | 219 | 1 | 219 | 1.46e-130 | 367 |
| Msa0592170 | AT1G04750.1 | 81.735 | 219 | 40 | 0 | 1 | 219 | 1 | 219 | 1.54e-126 | 356 |
| Msa0592170 | AT2G32670.1 | 80.822 | 219 | 42 | 0 | 1 | 219 | 66 | 284 | 4.04e-126 | 358 |
| Msa0592170 | AT2G33120.1 | 81.735 | 219 | 40 | 0 | 1 | 219 | 1 | 219 | 5.64e-126 | 355 |
| Msa0592170 | AT2G33120.2 | 78.414 | 227 | 41 | 1 | 1 | 219 | 1 | 227 | 8.59e-123 | 347 |
| Msa0592170 | AT3G54300.3 | 55.882 | 238 | 86 | 1 | 1 | 219 | 1 | 238 | 4.40e-99 | 288 |
| Msa0592170 | AT3G54300.2 | 55.882 | 238 | 86 | 1 | 1 | 219 | 1 | 238 | 4.40e-99 | 288 |
| Msa0592170 | AT3G54300.1 | 55.882 | 238 | 86 | 1 | 1 | 219 | 1 | 238 | 4.40e-99 | 288 |
| Msa0592170 | AT2G33110.1 | 67.580 | 219 | 67 | 1 | 1 | 219 | 1 | 215 | 2.69e-98 | 285 |
| Msa0592170 | AT4G15780.1 | 70.391 | 179 | 52 | 1 | 1 | 178 | 1 | 179 | 1.84e-93 | 271 |
| Msa0592170 | AT2G33110.2 | 70.370 | 162 | 48 | 0 | 1 | 162 | 1 | 162 | 1.84e-86 | 254 |
| Msa0592170 | AT1G04750.2 | 82.979 | 141 | 24 | 0 | 79 | 219 | 1 | 141 | 8.75e-74 | 220 |
| Msa0592170 | AT1G04750.4 | 82.979 | 141 | 24 | 0 | 79 | 219 | 1 | 141 | 8.75e-74 | 220 |
| Msa0592170 | AT1G04750.3 | 82.979 | 141 | 24 | 0 | 79 | 219 | 1 | 141 | 8.75e-74 | 220 |
| Msa0592170 | AT5G11150.1 | 39.631 | 217 | 125 | 4 | 5 | 218 | 2 | 215 | 1.21e-52 | 169 |
| Msa0592170 | AT5G11150.2 | 39.631 | 217 | 125 | 4 | 5 | 218 | 2 | 215 | 1.97e-52 | 169 |
| Msa0592170 | AT5G22360.1 | 37.500 | 216 | 131 | 3 | 5 | 218 | 2 | 215 | 3.04e-51 | 166 |
| Msa0592170 | AT4G32150.1 | 38.498 | 213 | 128 | 3 | 5 | 216 | 2 | 212 | 8.76e-49 | 159 |
| Msa0592170 | AT2G25340.1 | 37.850 | 214 | 128 | 4 | 5 | 216 | 2 | 212 | 6.91e-44 | 147 |
| Msa0592170 | AT2G33120.3 | 87.209 | 86 | 11 | 0 | 134 | 219 | 52 | 137 | 3.74e-36 | 124 |
| Msa0592170 | AT3G24890.2 | 53.191 | 94 | 38 | 2 | 113 | 200 | 14 | 107 | 5.66e-25 | 95.5 |
| Msa0592170 | AT3G24890.1 | 54.839 | 62 | 24 | 1 | 113 | 174 | 14 | 71 | 2.25e-15 | 68.9 |
| Msa0592170 | AT3G24890.4 | 54.839 | 62 | 24 | 1 | 113 | 174 | 14 | 71 | 2.25e-15 | 68.9 |
| Msa0592170 | AT3G24890.3 | 54.839 | 62 | 24 | 1 | 113 | 174 | 14 | 71 | 2.25e-15 | 68.9 |
| Msa0592170 | AT3G24890.5 | 54.839 | 62 | 24 | 1 | 113 | 174 | 14 | 71 | 2.25e-15 | 68.9 |
Find 59 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGTATTGTTTCATTTA+TGG | 0.070672 | 4_2:-17365741 | Msa0592170:three_prime_UTR |
| AAAAGTCTTAACAAAGAATT+TGG | 0.112791 | 4_2:-17368044 | Msa0592170:CDS |
| GAGAGAGGTGTTGTCAAATT+TGG | 0.177201 | 4_2:+17371137 | None:intergenic |
| CTAGATTTGTCACTACATTT+TGG | 0.205103 | 4_2:-17365920 | Msa0592170:three_prime_UTR |
| GGGAGAGAAGATTGAGGTTT+TGG | 0.245399 | 4_2:-17366770 | Msa0592170:CDS |
| TTGTGCAGGCACAAGATTTC+AGG | 0.249513 | 4_2:-17366087 | Msa0592170:intron |
| ACCACATCTTTCTTCTCAAT+TGG | 0.287559 | 4_2:+17366053 | None:intergenic |
| TGCAGAGATTGTTTGTGTTT+TGG | 0.302915 | 4_2:-17365657 | Msa0592170:three_prime_UTR |
| TTCAACTTCCTCGTCGATAA+TGG | 0.321321 | 4_2:-17370837 | Msa0592170:CDS |
| TGCATCTGCTCCTTCAACTT+TGG | 0.346126 | 4_2:+17367935 | None:intergenic |
| ATACGTTCAAGAAAAGCTAT+TGG | 0.353729 | 4_2:+17368122 | None:intergenic |
| TTTGTTTATTAGACATTCAA+TGG | 0.373984 | 4_2:-17365849 | Msa0592170:three_prime_UTR |
| ATCATTGATCTATAGCTTTG+TGG | 0.397799 | 4_2:-17370988 | Msa0592170:CDS |
| CCACATCTTTCTTCTCAATT+GGG | 0.397994 | 4_2:+17366054 | None:intergenic |
| CTGAAAAGAGCAAGGTAGTC+AGG | 0.403692 | 4_2:+17371163 | None:intergenic |
| AACTGAGAACCTTCGCTCTC+AGG | 0.417900 | 4_2:-17366740 | Msa0592170:intron |
| TCTGCAACAGGTTCAATAGA+AGG | 0.429967 | 4_2:+17371044 | None:intergenic |
| GCAATATTGTGTGGAACATC+CGG | 0.435244 | 4_2:-17367915 | Msa0592170:CDS |
| GGCACAAGATTTCAGGCAGC+AGG | 0.435566 | 4_2:-17366080 | Msa0592170:CDS |
| GTTATTTGCAGGTTATTGAC+AGG | 0.439122 | 4_2:-17366792 | Msa0592170:intron |
| GCAAGTTTGCTAACTTCCTC+CGG | 0.449150 | 4_2:+17367896 | None:intergenic |
| AATTCACAACTCTCTGCAAC+AGG | 0.452229 | 4_2:+17371032 | None:intergenic |
| ATCATAAAGTTCATTGTATG+AGG | 0.452764 | 4_2:+17365871 | None:intergenic |
| TTGTGAATTGTGATCATTCA+TGG | 0.455075 | 4_2:-17371018 | Msa0592170:exon |
| TGAAGTCAAAGGAGTTATGA+TGG | 0.459537 | 4_2:-17367852 | Msa0592170:CDS |
| TTATTTGAGTTAAATATACT+AGG | 0.476525 | 4_2:+17365632 | None:intergenic |
| ATCTATAGCTTTGTGGCTCG+TGG | 0.480841 | 4_2:-17370981 | Msa0592170:CDS |
| AGCTTACTGTGTTGTGGCAG+TGG | 0.485476 | 4_2:-17368165 | Msa0592170:CDS |
| ATTGTTCTTTCTGTGTGCCA+TGG | 0.487473 | 4_2:-17365971 | Msa0592170:CDS |
| ATGCTTTAGACCAAAGTTGA+AGG | 0.496438 | 4_2:-17367945 | Msa0592170:intron |
| AAAGTCTTAACAAAGAATTT+GGG | 0.498770 | 4_2:-17368043 | Msa0592170:intron |
| TGACAGGGGAGAGAAGATTG+AGG | 0.506422 | 4_2:-17366776 | Msa0592170:CDS |
| TTGAAGATACTGTAAAGCTA+TGG | 0.508013 | 4_2:+17370911 | None:intergenic |
| AACAATACAGTTTATAGAGC+AGG | 0.512949 | 4_2:+17365751 | None:intergenic |
| AGAGGTGTTGTCAAATTTGG+AGG | 0.533211 | 4_2:+17371140 | None:intergenic |
| AGGTTTACTTACAACTGTGA+TGG | 0.540715 | 4_2:-17370867 | Msa0592170:CDS |
| TTTAATAAAAGATATGGTGG+AGG | 0.542291 | 4_2:-17368089 | Msa0592170:CDS |
| GCGGAGTACACCGACTTCAC+AGG | 0.545642 | 4_2:-17370945 | Msa0592170:CDS |
| ATTATCGACGAGGAAGTTGA+AGG | 0.566398 | 4_2:+17370839 | None:intergenic |
| AAGGATAGAGATATAGAGAG+AGG | 0.568341 | 4_2:+17371122 | None:intergenic |
| TCAATGCAATTATGATAGCA+AGG | 0.574702 | 4_2:+17366002 | None:intergenic |
| GGAAGTGAATAAGTTGTGGT+AGG | 0.578539 | 4_2:-17365802 | Msa0592170:three_prime_UTR |
| GAAGGGAAGTGAATAAGTTG+TGG | 0.578830 | 4_2:-17365806 | Msa0592170:three_prime_UTR |
| TTATTTGCAGGTTATTGACA+GGG | 0.579398 | 4_2:-17366791 | Msa0592170:intron |
| GCTCAAGTTTCTGAAGTCAA+AGG | 0.586109 | 4_2:-17367863 | Msa0592170:CDS |
| ATAGTTAACAACTGAAGCCA+TGG | 0.593585 | 4_2:+17365954 | None:intergenic |
| TGTGAATTGTGATCATTCAT+GGG | 0.599877 | 4_2:-17371017 | Msa0592170:exon |
| TGTGAAGTTTCCTGTGAAGT+CGG | 0.612990 | 4_2:+17370935 | None:intergenic |
| GCACAAGATTTCAGGCAGCA+GGG | 0.625497 | 4_2:-17366079 | Msa0592170:CDS |
| AGCATCTAACCTGAGAGCGA+AGG | 0.629350 | 4_2:+17366731 | None:intergenic |
| GTTGTGGCAGTGGAGTCAGT+TGG | 0.632341 | 4_2:-17368155 | Msa0592170:CDS |
| TATTTGCAGGTTATTGACAG+GGG | 0.645793 | 4_2:-17366790 | Msa0592170:intron |
| TCGTGGCACAGTGATTCTTG+CGG | 0.647154 | 4_2:-17370964 | Msa0592170:CDS |
| TTTGGAGGCTGAAAAGAGCA+AGG | 0.657353 | 4_2:+17371155 | None:intergenic |
| CCCAATTGAGAAGAAAGATG+TGG | 0.657791 | 4_2:-17366054 | Msa0592170:CDS |
| GGAGCAGATGCAATATTGTG+TGG | 0.680494 | 4_2:-17367924 | Msa0592170:CDS |
| ATATTGTGTGGAACATCCGG+AGG | 0.702619 | 4_2:-17367912 | Msa0592170:CDS |
| TACTAAGTCCATTATCGACG+AGG | 0.707735 | 4_2:+17370829 | None:intergenic |
| TATGATGGAAAATATCGACA+AGG | 0.735916 | 4_2:-17367837 | Msa0592170:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTTTATTTTATTTT+TGG | + | chr4_2:17365728-17365747 | None:intergenic | 0.0% |
| !!! | TTAAAATAAAATGTGATTTT+AGG | - | chr4_2:17368079-17368098 | Msa0592170:CDS | 10.0% |
| !! | TTATTAATGTAAATTGAAAT+AGG | - | chr4_2:17370133-17370152 | Msa0592170:intron | 10.0% |
| !!! | TTTTATTTTTGGAAAAGAAA+TGG | + | chr4_2:17365717-17365736 | None:intergenic | 15.0% |
| !! | TTGAACAAAATATTATTCAA+GGG | + | chr4_2:17366044-17366063 | None:intergenic | 15.0% |
| !!! | ATTCTTAAACTTCTATTTTT+GGG | + | chr4_2:17366230-17366249 | None:intergenic | 15.0% |
| !! | ATTGAAAAAAACAAAATGTA+AGG | + | chr4_2:17368353-17368372 | None:intergenic | 15.0% |
| !!! | TCATAAATTTTAAGATAAGA+GGG | + | chr4_2:17368508-17368527 | None:intergenic | 15.0% |
| !!! | ATCATAAATTTTAAGATAAG+AGG | + | chr4_2:17368509-17368528 | None:intergenic | 15.0% |
| !!! | GATGATTTTAATAAAAGATA+TGG | - | chr4_2:17368700-17368719 | Msa0592170:intron | 15.0% |
| !! | AACATTGTTTAACATTATTA+TGG | - | chr4_2:17369605-17369624 | Msa0592170:intron | 15.0% |
| !!! | TATTATTATATGTTATTTGC+AGG | - | chr4_2:17369992-17370011 | Msa0592170:intron | 15.0% |
| !! | ATTTACATTAATAAAACTGT+TGG | + | chr4_2:17370127-17370146 | None:intergenic | 15.0% |
| !!! | GTTTCAAAATTTTATTTAAC+TGG | + | chr4_2:17370545-17370564 | None:intergenic | 15.0% |
| !! | CATACAATATTCATAATTAA+TGG | + | chr4_2:17370645-17370664 | None:intergenic | 15.0% |
| !! | TTAATTATGAATATTGTATG+AGG | - | chr4_2:17370645-17370664 | Msa0592170:intron | 15.0% |
| !!! | TATTTTGTTGTAGAATTAAT+TGG | - | chr4_2:17371099-17371118 | Msa0592170:five_prime_UTR | 15.0% |
| !!! | TTATTTGAGTTAAATATACT+AGG | + | chr4_2:17371166-17371185 | None:intergenic | 15.0% |
| !! | GAAATGATGAAAAAATGAAA+AGG | + | chr4_2:17365695-17365714 | None:intergenic | 20.0% |
| !! | GTTGAACAAAATATTATTCA+AGG | + | chr4_2:17366045-17366064 | None:intergenic | 20.0% |
| !! | TTTAATAATATCGACATTGT+CGG | + | chr4_2:17366067-17366086 | None:intergenic | 20.0% |
| !!! | TTAAACTGAACATTTTTACT+AGG | - | chr4_2:17366082-17366101 | Msa0592170:CDS | 20.0% |
| !!! | TAAACTGAACATTTTTACTA+GGG | - | chr4_2:17366083-17366102 | Msa0592170:intron | 20.0% |
| !!! | GATTCTTAAACTTCTATTTT+TGG | + | chr4_2:17366231-17366250 | None:intergenic | 20.0% |
| !!! | TTTTAATTGTGATGATGAAA+TGG | - | chr4_2:17366380-17366399 | Msa0592170:intron | 20.0% |
| !! | AGAATGATAAATCAAAGATA+AGG | + | chr4_2:17366593-17366612 | None:intergenic | 20.0% |
| !! | GATTTATCATTCTTAACTTA+TGG | - | chr4_2:17366600-17366619 | Msa0592170:intron | 20.0% |
| !! | TATCTTTCAAATTGCATAAT+TGG | - | chr4_2:17366778-17366797 | Msa0592170:CDS | 20.0% |
| !!! | ATATAGGACTTTTTGATATA+CGG | + | chr4_2:17366823-17366842 | None:intergenic | 20.0% |
| !!! | TTTTCATGCAAAATAAATCA+TGG | + | chr4_2:17366867-17366886 | None:intergenic | 20.0% |
| !! | CTAGTAATTTAATTATGCAA+CGG | - | chr4_2:17366900-17366919 | Msa0592170:intron | 20.0% |
| !! | ATTGAAGAATAACAAATGTA+TGG | + | chr4_2:17367134-17367153 | None:intergenic | 20.0% |
| !!! | AGAATTATTGTTTAAGATAG+TGG | - | chr4_2:17367188-17367207 | Msa0592170:intron | 20.0% |
| !!! | GAATTATTGTTTAAGATAGT+GGG | - | chr4_2:17367189-17367208 | Msa0592170:intron | 20.0% |
| !!! | AATTATTGTTTAAGATAGTG+GGG | - | chr4_2:17367190-17367209 | Msa0592170:intron | 20.0% |
| !! | TTTATGTTAGAAAGATTGTT+AGG | - | chr4_2:17367323-17367342 | Msa0592170:intron | 20.0% |
| !! | TTATGTTAGAAAGATTGTTA+GGG | - | chr4_2:17367324-17367343 | Msa0592170:intron | 20.0% |
| !!! | GATTTTTTCTTCTTTTTTTC+TGG | - | chr4_2:17368146-17368165 | Msa0592170:CDS | 20.0% |
| !! | CATAATATATATAAGGTATG+GGG | + | chr4_2:17368179-17368198 | None:intergenic | 20.0% |
| !! | GCATAATATATATAAGGTAT+GGG | + | chr4_2:17368180-17368199 | None:intergenic | 20.0% |
| !! | TGCATAATATATATAAGGTA+TGG | + | chr4_2:17368181-17368200 | None:intergenic | 20.0% |
| !! | GACAATGCATAATATATATA+AGG | + | chr4_2:17368186-17368205 | None:intergenic | 20.0% |
| !!! | TAATCTGATTTTATGAATTG+AGG | + | chr4_2:17368282-17368301 | None:intergenic | 20.0% |
| !! | AAACATGTTCAACAAAAAAA+AGG | + | chr4_2:17368589-17368608 | None:intergenic | 20.0% |
| !!! | GATTTTAATAAAAGATATGG+TGG | - | chr4_2:17368703-17368722 | Msa0592170:intron | 20.0% |
| !! | AAAAGTCTTAACAAAGAATT+TGG | - | chr4_2:17368751-17368770 | Msa0592170:intron | 20.0% |
| !! | AAAGTCTTAACAAAGAATTT+GGG | - | chr4_2:17368752-17368771 | Msa0592170:intron | 20.0% |
| !! | AATGTGTGTATCAATATATA+TGG | + | chr4_2:17368998-17369017 | None:intergenic | 20.0% |
| !!! | TGGATTTTAATATTTATGTC+GGG | + | chr4_2:17369105-17369124 | None:intergenic | 20.0% |
| !!! | CTGGATTTTAATATTTATGT+CGG | + | chr4_2:17369106-17369125 | None:intergenic | 20.0% |
| !! | ATTGAGTAGTATCATAAAAA+TGG | + | chr4_2:17369269-17369288 | None:intergenic | 20.0% |
| !!! | CTTTTATGTATTTATAGAAC+CGG | + | chr4_2:17369333-17369352 | None:intergenic | 20.0% |
| !! | CAAAGAAATCATCAATTATA+TGG | + | chr4_2:17369441-17369460 | None:intergenic | 20.0% |
| !! | TTAAACCATTTATGACTATA+TGG | - | chr4_2:17369680-17369699 | Msa0592170:intron | 20.0% |
| !! | AAATTCCATATAGTCATAAA+TGG | + | chr4_2:17369688-17369707 | None:intergenic | 20.0% |
| !! | GAATTTCATTTAATATCATG+TGG | - | chr4_2:17369959-17369978 | Msa0592170:intron | 20.0% |
| !!! | ATCCAAAACTTTAAAACATT+GGG | + | chr4_2:17370324-17370343 | None:intergenic | 20.0% |
| !!! | TATCCAAAACTTTAAAACAT+TGG | + | chr4_2:17370325-17370344 | None:intergenic | 20.0% |
| !! | AAAATTAGATGTGAGAATTT+GGG | + | chr4_2:17370396-17370415 | None:intergenic | 20.0% |
| !! | TTAACTGGAATTATTGAATT+TGG | + | chr4_2:17370530-17370549 | None:intergenic | 20.0% |
| !! | TTACCAGTTATTTATTATCT+AGG | - | chr4_2:17370588-17370607 | Msa0592170:intron | 20.0% |
| !! | TATTAGAATGTCAATTGAAA+TGG | - | chr4_2:17370677-17370696 | Msa0592170:intron | 20.0% |
| !! | TTTGTTTATTAGACATTCAA+TGG | - | chr4_2:17370946-17370965 | Msa0592170:CDS | 20.0% |
| !! | AAACTGTATTGTTTCATTTA+TGG | - | chr4_2:17371054-17371073 | Msa0592170:five_prime_UTR | 20.0% |
| ! | AACAAACATCACATAAAACT+GGG | + | chr4_2:17366125-17366144 | None:intergenic | 25.0% |
| ! | TAACAAACATCACATAAAAC+TGG | + | chr4_2:17366126-17366145 | None:intergenic | 25.0% |
| ! | TTAAGACAAAACAAGAAACA+AGG | - | chr4_2:17366153-17366172 | Msa0592170:intron | 25.0% |
| ! | AAAGCTAACATAATTAACGT+AGG | - | chr4_2:17366202-17366221 | Msa0592170:intron | 25.0% |
| ! | TCACAAAAGAAGAAAAACTA+TGG | - | chr4_2:17366495-17366514 | Msa0592170:intron | 25.0% |
| ! | AAGAATAAAGATTAGTGACT+AGG | - | chr4_2:17366536-17366555 | Msa0592170:intron | 25.0% |
| !! | GTTATACTCTTTTGTAAGTA+TGG | - | chr4_2:17366566-17366585 | Msa0592170:intron | 25.0% |
| ! | AGTATTAACATTGCTTCATA+TGG | + | chr4_2:17366674-17366693 | None:intergenic | 25.0% |
| ! | TTGCATGAGAAAAATGATAT+AGG | + | chr4_2:17366839-17366858 | None:intergenic | 25.0% |
| ! | TGCATGAAAATATGATTCAA+CGG | - | chr4_2:17366877-17366896 | Msa0592170:intron | 25.0% |
| ! | ATCAATATCACTCTAACAAA+TGG | + | chr4_2:17367099-17367118 | None:intergenic | 25.0% |
| !! | ATTATTGTTTAAGATAGTGG+GGG | - | chr4_2:17367191-17367210 | Msa0592170:intron | 25.0% |
| ! | TATCTTGTGATTGTTGTAAA+AGG | - | chr4_2:17367217-17367236 | Msa0592170:intron | 25.0% |
| ! | TTGTAAAAGGTTCTTTGATT+CGG | - | chr4_2:17367230-17367249 | Msa0592170:intron | 25.0% |
| ! | TATGTTAGAAAGATTGTTAG+GGG | - | chr4_2:17367325-17367344 | Msa0592170:intron | 25.0% |
| !! | TTAATATGAAGGTATGAATG+CGG | + | chr4_2:17367498-17367517 | None:intergenic | 25.0% |
| !! | TTTCTGGAAACTTAATATGA+AGG | + | chr4_2:17367509-17367528 | None:intergenic | 25.0% |
| !! | AATTAGGTTTCTAGGAATAT+TGG | + | chr4_2:17367565-17367584 | None:intergenic | 25.0% |
| !!! | TGTATTTTGAGCAATGTATA+AGG | - | chr4_2:17367628-17367647 | Msa0592170:intron | 25.0% |
| !!! | TTTTAATTGTGATGATGAAG+TGG | - | chr4_2:17367851-17367870 | Msa0592170:CDS | 25.0% |
| ! | AAAATAATCCAATGATGCTT+TGG | - | chr4_2:17368112-17368131 | Msa0592170:CDS | 25.0% |
| ! | TTTAATAAAAGATATGGTGG+AGG | - | chr4_2:17368706-17368725 | Msa0592170:intron | 25.0% |
| ! | ATAACATGTAGATACCAATT+CGG | + | chr4_2:17369059-17369078 | None:intergenic | 25.0% |
| ! | TGAAAAAAGTCGTAAAATTC+TGG | + | chr4_2:17369125-17369144 | None:intergenic | 25.0% |
| !!! | GATACTACTCAATTTTAACT+CGG | - | chr4_2:17369276-17369295 | Msa0592170:intron | 25.0% |
| ! | AACTGAGACAAAATACTTAA+AGG | + | chr4_2:17369581-17369600 | None:intergenic | 25.0% |
| !! | AATGAAATTCTAGAGACAAT+TGG | + | chr4_2:17369949-17369968 | None:intergenic | 25.0% |
| !! | CATTAATAAAACTGTTGGTT+TGG | + | chr4_2:17370122-17370141 | None:intergenic | 25.0% |
| ! | ATGCATATAATAGATAGTTC+TGG | - | chr4_2:17370196-17370215 | Msa0592170:intron | 25.0% |
| !!! | ATCCCAATGTTTTAAAGTTT+TGG | - | chr4_2:17370319-17370338 | Msa0592170:intron | 25.0% |
| ! | GAAAATTAGATGTGAGAATT+TGG | + | chr4_2:17370397-17370416 | None:intergenic | 25.0% |
| ! | TAGCCTAGATAATAAATAAC+TGG | + | chr4_2:17370594-17370613 | None:intergenic | 25.0% |
| ! | ATCATAAAGTTCATTGTATG+AGG | + | chr4_2:17370927-17370946 | None:intergenic | 25.0% |
| ! | GGATTCATGTAAAAAAAGTT+AGG | - | chr4_2:17370967-17370986 | Msa0592170:CDS | 25.0% |
| ! | TCATGTAAAAAAAGTTAGGA+AGG | - | chr4_2:17370971-17370990 | Msa0592170:CDS | 25.0% |
| ! | CATGTAAAAAAAGTTAGGAA+GGG | - | chr4_2:17370972-17370991 | Msa0592170:CDS | 25.0% |
| TTGTGAATTGTGATCATTCA+TGG | - | chr4_2:17365777-17365796 | Msa0592170:three_prime_UTR | 30.0% | |
| TGTGAATTGTGATCATTCAT+GGG | - | chr4_2:17365778-17365797 | Msa0592170:three_prime_UTR | 30.0% | |
| ! | ATCATTGATCTATAGCTTTG+TGG | - | chr4_2:17365807-17365826 | Msa0592170:three_prime_UTR | 30.0% |
| TTGAAGATACTGTAAAGCTA+TGG | + | chr4_2:17365887-17365906 | None:intergenic | 30.0% | |
| ! | AACTTCCTGCTTCTAAAAAT+AGG | - | chr4_2:17365908-17365927 | Msa0592170:three_prime_UTR | 30.0% |
| !!! | GTAAACCTATTTTTAGAAGC+AGG | + | chr4_2:17365916-17365935 | None:intergenic | 30.0% |
| CAAAAGAAGAAAAACTATGG+AGG | - | chr4_2:17366498-17366517 | Msa0592170:intron | 30.0% | |
| TGGAGACTTAGAAAAATGTT+AGG | + | chr4_2:17366654-17366673 | None:intergenic | 30.0% | |
| ! | TATGCAACGGCAAATTATTT+TGG | - | chr4_2:17366913-17366932 | Msa0592170:intron | 30.0% |
| ACAATAATTCTCACCAACAA+TGG | + | chr4_2:17367179-17367198 | None:intergenic | 30.0% | |
| TGTAAAAGGTTCTTTGATTC+GGG | - | chr4_2:17367231-17367250 | Msa0592170:intron | 30.0% | |
| ATGTTAGAAAGATTGTTAGG+GGG | - | chr4_2:17367326-17367345 | Msa0592170:intron | 30.0% | |
| AAGACACAAGAGAATTATAG+TGG | + | chr4_2:17367448-17367467 | None:intergenic | 30.0% | |
| GCGGAAAAATAAAAGAGTAA+GGG | + | chr4_2:17367479-17367498 | None:intergenic | 30.0% | |
| TGCGGAAAAATAAAAGAGTA+AGG | + | chr4_2:17367480-17367499 | None:intergenic | 30.0% | |
| !! | AGCGTTCTTGATAATTTTTC+TGG | + | chr4_2:17367525-17367544 | None:intergenic | 30.0% |
| TAGATGGAACAATAACTAGT+TGG | - | chr4_2:17367673-17367692 | Msa0592170:intron | 30.0% | |
| TATTAGTGAGCTTCAACATA+TGG | + | chr4_2:17368387-17368406 | None:intergenic | 30.0% | |
| ATCCTTGCTTAAATTGCTTA+TGG | - | chr4_2:17368462-17368481 | Msa0592170:intron | 30.0% | |
| TGAACATGTTTCATGATTAG+TGG | - | chr4_2:17368598-17368617 | Msa0592170:intron | 30.0% | |
| ATACGTTCAAGAAAAGCTAT+TGG | + | chr4_2:17368676-17368695 | None:intergenic | 30.0% | |
| ! | AGCTTTTCTTGAACGTATTA+AGG | - | chr4_2:17368678-17368697 | Msa0592170:intron | 30.0% |
| ! | TATGATGGAAAATATCGACA+AGG | - | chr4_2:17368958-17368977 | Msa0592170:intron | 30.0% |
| !!! | AAATGTAGGTGCTATTTTGT+TGG | + | chr4_2:17369024-17369043 | None:intergenic | 30.0% |
| ! | GGTTCTTCAATCTAAAATGT+AGG | + | chr4_2:17369038-17369057 | None:intergenic | 30.0% |
| TTTAGATTGAAGAACCGAAT+TGG | - | chr4_2:17369042-17369061 | Msa0592170:intron | 30.0% | |
| TTTAATTCTTTCACACCACA+CGG | - | chr4_2:17369362-17369381 | Msa0592170:intron | 30.0% | |
| ! | TCTTTTGCCTTGAAACTTAA+TGG | - | chr4_2:17369507-17369526 | Msa0592170:intron | 30.0% |
| TAAGTGACCATTAAGTTTCA+AGG | + | chr4_2:17369517-17369536 | None:intergenic | 30.0% | |
| TATGGCTACTAAAGAATATC+TGG | - | chr4_2:17369623-17369642 | Msa0592170:intron | 30.0% | |
| AAAATCGCAAGCAAAATTGA+TGG | + | chr4_2:17369749-17369768 | None:intergenic | 30.0% | |
| AAAATCGCAATCAAAATCGA+AGG | + | chr4_2:17369820-17369839 | None:intergenic | 30.0% | |
| TTATTTGCAGGTTATTGACA+GGG | - | chr4_2:17370004-17370023 | Msa0592170:intron | 30.0% | |
| ATTGAAATAGGAGATGAGTA+TGG | - | chr4_2:17370145-17370164 | Msa0592170:intron | 30.0% | |
| ! | AATTTTCTTGTTGATGCCTT+AGG | - | chr4_2:17370410-17370429 | Msa0592170:intron | 30.0% |
| ! | ATTTTCTTGTTGATGCCTTA+GGG | - | chr4_2:17370411-17370430 | Msa0592170:intron | 30.0% |
| !!! | TTTTGAAACTCTAGCACTAT+CGG | - | chr4_2:17370556-17370575 | Msa0592170:intron | 30.0% |
| GAATGTCAATTGAAATGGTA+TGG | - | chr4_2:17370682-17370701 | Msa0592170:intron | 30.0% | |
| TCAATGCAATTATGATAGCA+AGG | + | chr4_2:17370796-17370815 | None:intergenic | 30.0% | |
| ! | CTAGATTTGTCACTACATTT+TGG | - | chr4_2:17370875-17370894 | Msa0592170:CDS | 30.0% |
| AACAATACAGTTTATAGAGC+AGG | + | chr4_2:17371047-17371066 | None:intergenic | 30.0% | |
| AAGGATAGAGATATAGAGAG+AGG | + | chr4_2:17365676-17365695 | None:intergenic | 35.0% | |
| AGGTTTACTTACAACTGTGA+TGG | - | chr4_2:17365928-17365947 | Msa0592170:three_prime_UTR | 35.0% | |
| ! | TTTTACTAGGGTTCGAACTT+AGG | - | chr4_2:17366095-17366114 | Msa0592170:intron | 35.0% |
| CATCCAATAATAGAAGTGGA+CGG | + | chr4_2:17366407-17366426 | None:intergenic | 35.0% | |
| GAAGATTTCCTTCTTAGACT+TGG | - | chr4_2:17366445-17366464 | Msa0592170:intron | 35.0% | |
| GTAAAGTTTCTTGCCATTGT+TGG | - | chr4_2:17367163-17367182 | Msa0592170:intron | 35.0% | |
| ! | ACACAAACACCAAACACTTT+TGG | + | chr4_2:17367272-17367291 | None:intergenic | 35.0% |
| TTGTGTTGAAATCAAGAGAG+AGG | - | chr4_2:17367286-17367305 | Msa0592170:intron | 35.0% | |
| TGTGTTGAAATCAAGAGAGA+GGG | - | chr4_2:17367287-17367306 | Msa0592170:intron | 35.0% | |
| GTTCAGATTGTAACCTAAGA+GGG | + | chr4_2:17367593-17367612 | None:intergenic | 35.0% | |
| AGTTCAGATTGTAACCTAAG+AGG | + | chr4_2:17367594-17367613 | None:intergenic | 35.0% | |
| TGAGCAATGTATAAGGTCAA+TGG | - | chr4_2:17367635-17367654 | Msa0592170:intron | 35.0% | |
| TAAGGTCAATGGTTCAAACT+TGG | - | chr4_2:17367646-17367665 | Msa0592170:intron | 35.0% | |
| GTTCAAACTTGGCTAATAGA+TGG | - | chr4_2:17367657-17367676 | Msa0592170:intron | 35.0% | |
| ATGAATCAAGTGTCAACAGT+TGG | - | chr4_2:17367743-17367762 | Msa0592170:intron | 35.0% | |
| TCAAAATACCATCACGGTTA+AGG | + | chr4_2:17367905-17367924 | None:intergenic | 35.0% | |
| CATTGCTCAAAATACCATCA+CGG | + | chr4_2:17367911-17367930 | None:intergenic | 35.0% | |
| !! | ATGGTATTTTGAGCAATGGA+TGG | - | chr4_2:17367913-17367932 | Msa0592170:CDS | 35.0% |
| !! | TGGTATTTTGAGCAATGGAT+GGG | - | chr4_2:17367914-17367933 | Msa0592170:CDS | 35.0% |
| TAGTTATTGTTCCGCCTATT+AGG | + | chr4_2:17367957-17367976 | None:intergenic | 35.0% | |
| ATAAATCAAGTGTCCACAGT+TGG | - | chr4_2:17368031-17368050 | Msa0592170:intron | 35.0% | |
| ! | CAAAATCTCCAAAGCATCAT+TGG | + | chr4_2:17368123-17368142 | None:intergenic | 35.0% |
| TGTCTCTAATAACTAAGCTC+AGG | - | chr4_2:17368202-17368221 | Msa0592170:intron | 35.0% | |
| CACCATAAGCAATTTAAGCA+AGG | + | chr4_2:17368467-17368486 | None:intergenic | 35.0% | |
| ! | ATGCTTTAGACCAAAGTTGA+AGG | - | chr4_2:17368850-17368869 | Msa0592170:intron | 35.0% |
| TGAAGTCAAAGGAGTTATGA+TGG | - | chr4_2:17368943-17368962 | Msa0592170:intron | 35.0% | |
| GAAAATCCATGCAAAATCGT+AGG | - | chr4_2:17369226-17369245 | Msa0592170:intron | 35.0% | |
| ! | CAAAATCCTACGATTTTGCA+TGG | + | chr4_2:17369235-17369254 | None:intergenic | 35.0% |
| ! | GCAAAATCGTAGGATTTTGA+AGG | - | chr4_2:17369236-17369255 | Msa0592170:intron | 35.0% |
| TATTTATAGAACCGGATCAC+GGG | + | chr4_2:17369325-17369344 | None:intergenic | 35.0% | |
| GTATTTATAGAACCGGATCA+CGG | + | chr4_2:17369326-17369345 | None:intergenic | 35.0% | |
| ! | TTTCTTTGTGATTTGCATCG+AGG | - | chr4_2:17369453-17369472 | Msa0592170:intron | 35.0% |
| AAGTATTTCGTCAGACATGT+AGG | - | chr4_2:17369550-17369569 | Msa0592170:intron | 35.0% | |
| CTAAAGAATATCTGGCATCT+AGG | - | chr4_2:17369631-17369650 | Msa0592170:intron | 35.0% | |
| ! | ATCTAGGCTTGAGTATTTTG+TGG | - | chr4_2:17369647-17369666 | Msa0592170:intron | 35.0% |
| ! | GACAGTAGGTTTTCAAAATC+GGG | + | chr4_2:17369886-17369905 | None:intergenic | 35.0% |
| ! | GGACAGTAGGTTTTCAAAAT+CGG | + | chr4_2:17369887-17369906 | None:intergenic | 35.0% |
| !! | GATTTTGAAAACCTACTGTC+CGG | - | chr4_2:17369886-17369905 | Msa0592170:intron | 35.0% |
| GTTATTTGCAGGTTATTGAC+AGG | - | chr4_2:17370003-17370022 | Msa0592170:intron | 35.0% | |
| TATTTGCAGGTTATTGACAG+GGG | - | chr4_2:17370005-17370024 | Msa0592170:intron | 35.0% | |
| ! | TTTGAAACTCTAGCACTATC+GGG | - | chr4_2:17370557-17370576 | Msa0592170:intron | 35.0% |
| CCACATCTTTCTTCTCAATT+GGG | + | chr4_2:17370744-17370763 | None:intergenic | 35.0% | |
| ACCACATCTTTCTTCTCAAT+TGG | + | chr4_2:17370745-17370764 | None:intergenic | 35.0% | |
| ATAGTTAACAACTGAAGCCA+TGG | + | chr4_2:17370844-17370863 | None:intergenic | 35.0% | |
| ! | TGCAGAGATTGTTTGTGTTT+TGG | - | chr4_2:17371138-17371157 | Msa0592170:five_prime_UTR | 35.0% |
| !! | AGAGGTGTTGTCAAATTTGG+AGG | + | chr4_2:17365658-17365677 | None:intergenic | 40.0% |
| !! | GAGAGAGGTGTTGTCAAATT+TGG | + | chr4_2:17365661-17365680 | None:intergenic | 40.0% |
| TCTGCAACAGGTTCAATAGA+AGG | + | chr4_2:17365754-17365773 | None:intergenic | 40.0% | |
| AATTCACAACTCTCTGCAAC+AGG | + | chr4_2:17365766-17365785 | None:intergenic | 40.0% | |
| TGTGAAGTTTCCTGTGAAGT+CGG | + | chr4_2:17365863-17365882 | None:intergenic | 40.0% | |
| ATTATCGACGAGGAAGTTGA+AGG | + | chr4_2:17365959-17365978 | None:intergenic | 40.0% | |
| TTCAACTTCCTCGTCGATAA+TGG | - | chr4_2:17365958-17365977 | Msa0592170:CDS | 40.0% | |
| TACTAAGTCCATTATCGACG+AGG | + | chr4_2:17365969-17365988 | None:intergenic | 40.0% | |
| TCTTCTTGTTGCAACGATGT+TGG | - | chr4_2:17366249-17366268 | Msa0592170:intron | 40.0% | |
| CGTCCACTTCTATTATTGGA+TGG | - | chr4_2:17366405-17366424 | Msa0592170:intron | 40.0% | |
| CCACCATCCAATAATAGAAG+TGG | + | chr4_2:17366411-17366430 | None:intergenic | 40.0% | |
| CCACTTCTATTATTGGATGG+TGG | - | chr4_2:17366408-17366427 | Msa0592170:intron | 40.0% | |
| ATTTCCTTCTTAGACTTGGC+TGG | - | chr4_2:17366449-17366468 | Msa0592170:intron | 40.0% | |
| TTTCCTTCTTAGACTTGGCT+GGG | - | chr4_2:17366450-17366469 | Msa0592170:intron | 40.0% | |
| AGATTAGTGACTAGGCTTCT+TGG | - | chr4_2:17366544-17366563 | Msa0592170:intron | 40.0% | |
| !! | CAAAGTCCACCAAAAGTGTT+TGG | - | chr4_2:17367260-17367279 | Msa0592170:intron | 40.0% |
| ! | CAAACACCAAACACTTTTGG+TGG | + | chr4_2:17367269-17367288 | None:intergenic | 40.0% |
| AAAGATTGTTAGGGGGTCTT+GGG | - | chr4_2:17367333-17367352 | Msa0592170:intron | 40.0% | |
| TAACACAGTGAATTCCTTCG+CGG | - | chr4_2:17367381-17367400 | Msa0592170:intron | 40.0% | |
| GACTGACCCTAAAGTTTAGA+GGG | - | chr4_2:17367419-17367438 | Msa0592170:intron | 40.0% | |
| ACTGACCCTAAAGTTTAGAG+GGG | - | chr4_2:17367420-17367439 | Msa0592170:intron | 40.0% | |
| TGGTTCCCCTCTAAACTTTA+GGG | + | chr4_2:17367428-17367447 | None:intergenic | 40.0% | |
| AGATTGTAACCTAAGAGGGA+GGG | + | chr4_2:17367589-17367608 | None:intergenic | 40.0% | |
| CATCCAACAATAGAAGTGGA+CGG | + | chr4_2:17367878-17367897 | None:intergenic | 40.0% | |
| !! | CGTGATGGTATTTTGAGCAA+TGG | - | chr4_2:17367909-17367928 | Msa0592170:CDS | 40.0% |
| ATGGTCCAAACTTGCCTAAT+AGG | - | chr4_2:17367940-17367959 | Msa0592170:intron | 40.0% | |
| TAGGCGGAACAATAACTAGT+TGG | - | chr4_2:17367959-17367978 | Msa0592170:intron | 40.0% | |
| AAGTTGTCCTTATCCAACTG+TGG | + | chr4_2:17368047-17368066 | None:intergenic | 40.0% | |
| ! | TTTTGCAGCTTACTGTGTTG+TGG | - | chr4_2:17368624-17368643 | Msa0592170:intron | 40.0% |
| GCAATATTGTGTGGAACATC+CGG | - | chr4_2:17368880-17368899 | Msa0592170:intron | 40.0% | |
| !! | GCTCAAGTTTCTGAAGTCAA+AGG | - | chr4_2:17368932-17368951 | Msa0592170:intron | 40.0% |
| AGGCGAACATGTTGATATGA+TGG | - | chr4_2:17369407-17369426 | Msa0592170:intron | 40.0% | |
| ! | CAAAATCGGGATTTAGCTTC+AGG | + | chr4_2:17369873-17369892 | None:intergenic | 40.0% |
| ACCTAAACATACACAGACAC+CGG | + | chr4_2:17369908-17369927 | None:intergenic | 40.0% | |
| !! | AGAGAAGATTGAGGTTTTGG+TGG | - | chr4_2:17370028-17370047 | Msa0592170:intron | 40.0% |
| TCTTAGTCGTCCTGAATCAT+CGG | - | chr4_2:17370364-17370383 | Msa0592170:intron | 40.0% | |
| CCCAATTGAGAAGAAAGATG+TGG | - | chr4_2:17370741-17370760 | Msa0592170:intron | 40.0% | |
| ATTGTTCTTTCTGTGTGCCA+TGG | - | chr4_2:17370824-17370843 | Msa0592170:intron | 40.0% | |
| GAAGGGAAGTGAATAAGTTG+TGG | - | chr4_2:17370989-17371008 | Msa0592170:CDS | 40.0% | |
| GGAAGTGAATAAGTTGTGGT+AGG | - | chr4_2:17370993-17371012 | Msa0592170:CDS | 40.0% | |
| CTGAAAAGAGCAAGGTAGTC+AGG | + | chr4_2:17365635-17365654 | None:intergenic | 45.0% | |
| TTTGGAGGCTGAAAAGAGCA+AGG | + | chr4_2:17365643-17365662 | None:intergenic | 45.0% | |
| !! | ATCTATAGCTTTGTGGCTCG+TGG | - | chr4_2:17365814-17365833 | Msa0592170:three_prime_UTR | 45.0% |
| GGACCGTCCACTTCTATTAT+TGG | - | chr4_2:17366401-17366420 | Msa0592170:intron | 45.0% | |
| AAACCCAGCCAAGTCTAAGA+AGG | + | chr4_2:17366456-17366475 | None:intergenic | 45.0% | |
| GAAAGATTGTTAGGGGGTCT+TGG | - | chr4_2:17367332-17367351 | Msa0592170:intron | 45.0% | |
| AAGATTGTTAGGGGGTCTTG+GGG | - | chr4_2:17367334-17367353 | Msa0592170:intron | 45.0% | |
| AACACAGTGAATTCCTTCGC+GGG | - | chr4_2:17367382-17367401 | Msa0592170:intron | 45.0% | |
| GGACTGACCCTAAAGTTTAG+AGG | - | chr4_2:17367418-17367437 | Msa0592170:intron | 45.0% | |
| GTGGTTCCCCTCTAAACTTT+AGG | + | chr4_2:17367429-17367448 | None:intergenic | 45.0% | |
| GATTGTAACCTAAGAGGGAG+GGG | + | chr4_2:17367588-17367607 | None:intergenic | 45.0% | |
| CAGATTGTAACCTAAGAGGG+AGG | + | chr4_2:17367590-17367609 | None:intergenic | 45.0% | |
| CAAGTGTCAACAGTTGGCTA+AGG | - | chr4_2:17367749-17367768 | Msa0592170:intron | 45.0% | |
| CGTCCACTTCTATTGTTGGA+TGG | - | chr4_2:17367876-17367895 | Msa0592170:CDS | 45.0% | |
| CCACCATCCAACAATAGAAG+TGG | + | chr4_2:17367882-17367901 | None:intergenic | 45.0% | |
| CCACTTCTATTGTTGGATGG+TGG | - | chr4_2:17367879-17367898 | Msa0592170:CDS | 45.0% | |
| TTGAGCAATGGATGGGTCAA+TGG | - | chr4_2:17367921-17367940 | Msa0592170:CDS | 45.0% | |
| GTCCAAACTTGCCTAATAGG+CGG | - | chr4_2:17367943-17367962 | Msa0592170:intron | 45.0% | |
| TTCCGCCTATTAGGCAAGTT+TGG | + | chr4_2:17367948-17367967 | None:intergenic | 45.0% | |
| CAAGTGTCCACAGTTGGATA+AGG | - | chr4_2:17368037-17368056 | Msa0592170:intron | 45.0% | |
| ATAACTAAGCTCAGGTCTCG+AGG | - | chr4_2:17368210-17368229 | Msa0592170:intron | 45.0% | |
| TGCATCTGCTCCTTCAACTT+TGG | + | chr4_2:17368863-17368882 | None:intergenic | 45.0% | |
| GGAGCAGATGCAATATTGTG+TGG | - | chr4_2:17368871-17368890 | Msa0592170:intron | 45.0% | |
| ATATTGTGTGGAACATCCGG+AGG | - | chr4_2:17368883-17368902 | Msa0592170:intron | 45.0% | |
| !! | GCAAGTTTGCTAACTTCCTC+CGG | + | chr4_2:17368902-17368921 | None:intergenic | 45.0% |
| ACTCGGTTCATCAATTGACC+TGG | - | chr4_2:17369293-17369312 | Msa0592170:intron | 45.0% | |
| TCTGCACAAGAGATTGACGA+AGG | - | chr4_2:17369387-17369406 | Msa0592170:intron | 45.0% | |
| ! | GGATTTAGCTTCAGGTCAGA+AGG | + | chr4_2:17369865-17369884 | None:intergenic | 45.0% |
| TCCGGTGTCTGTGTATGTTT+AGG | - | chr4_2:17369904-17369923 | Msa0592170:intron | 45.0% | |
| ! | GGGAGAGAAGATTGAGGTTT+TGG | - | chr4_2:17370025-17370044 | Msa0592170:intron | 45.0% |
| ACTCACACTTGAACCACACA+AGG | + | chr4_2:17370241-17370260 | None:intergenic | 45.0% | |
| TTGTGTGGTTCAAGTGTGAG+TGG | - | chr4_2:17370240-17370259 | Msa0592170:intron | 45.0% | |
| CTTAGTCGTCCTGAATCATC+GGG | - | chr4_2:17370365-17370384 | Msa0592170:intron | 45.0% | |
| AAATGGTATGGCTGTTGTGC+AGG | - | chr4_2:17370694-17370713 | Msa0592170:intron | 45.0% | |
| TTGTGCAGGCACAAGATTTC+AGG | - | chr4_2:17370708-17370727 | Msa0592170:intron | 45.0% | |
| !! | TATATTTAATTAATGTTTAA+TGG | - | chr4_2:17367704-17367723 | Msa0592170:intron | 5.0% |
| !!! | TAATTTTAATTAATGTTTAA+TGG | - | chr4_2:17367990-17368009 | Msa0592170:intron | 5.0% |
| TCGTGGCACAGTGATTCTTG+CGG | - | chr4_2:17365831-17365850 | Msa0592170:three_prime_UTR | 50.0% | |
| ACACAGTGAATTCCTTCGCG+GGG | - | chr4_2:17367383-17367402 | Msa0592170:intron | 50.0% | |
| GGGAGGGGAATTAGGTTTCT+AGG | + | chr4_2:17367573-17367592 | None:intergenic | 50.0% | |
| ACCTAATTCCCCTCCCTCTT+AGG | - | chr4_2:17367577-17367596 | Msa0592170:intron | 50.0% | |
| ACCTAAGAGGGAGGGGAATT+AGG | + | chr4_2:17367581-17367600 | None:intergenic | 50.0% | |
| GGACCGTCCACTTCTATTGT+TGG | - | chr4_2:17367872-17367891 | Msa0592170:CDS | 50.0% | |
| AGCTTACTGTGTTGTGGCAG+TGG | - | chr4_2:17368630-17368649 | Msa0592170:intron | 50.0% | |
| ATACACAGACACCGGACAGT+AGG | + | chr4_2:17369900-17369919 | None:intergenic | 50.0% | |
| TGACAGGGGAGAGAAGATTG+AGG | - | chr4_2:17370019-17370038 | Msa0592170:intron | 50.0% | |
| AACTGAGAACCTTCGCTCTC+AGG | - | chr4_2:17370055-17370074 | Msa0592170:intron | 50.0% | |
| AGCATCTAACCTGAGAGCGA+AGG | + | chr4_2:17370067-17370086 | None:intergenic | 50.0% | |
| ACTCGAATGACGTCCTTGTG+TGG | - | chr4_2:17370225-17370244 | Msa0592170:intron | 50.0% | |
| TGGGACTAACCCGATGATTC+AGG | + | chr4_2:17370377-17370396 | None:intergenic | 50.0% | |
| GTTGATGCCTTAGGGTTCAC+TGG | - | chr4_2:17370419-17370438 | Msa0592170:intron | 50.0% | |
| GCTTGAACCAGTGAACCCTA+AGG | + | chr4_2:17370429-17370448 | None:intergenic | 50.0% | |
| GCACAAGATTTCAGGCAGCA+GGG | - | chr4_2:17370716-17370735 | Msa0592170:intron | 50.0% | |
| AATTCCTTCGCGGGGTGTGA+AGG | - | chr4_2:17367391-17367410 | Msa0592170:intron | 55.0% | |
| ATTCCTTCGCGGGGTGTGAA+GGG | - | chr4_2:17367392-17367411 | Msa0592170:intron | 55.0% | |
| ! | GATGGTGGCCTTAACCGTGA+TGG | - | chr4_2:17367894-17367913 | Msa0592170:CDS | 55.0% |
| GTTGTGGCAGTGGAGTCAGT+TGG | - | chr4_2:17368640-17368659 | Msa0592170:intron | 55.0% | |
| ! | CCTGGTTTGTACCCGTGATC+CGG | - | chr4_2:17369311-17369330 | Msa0592170:intron | 55.0% |
| TCTCTTGTGCAGAGACCGTG+TGG | + | chr4_2:17369380-17369399 | None:intergenic | 55.0% | |
| GGCACAAGATTTCAGGCAGC+AGG | - | chr4_2:17370715-17370734 | Msa0592170:intron | 55.0% | |
| !! | GCGGAGTACACCGACTTCAC+AGG | - | chr4_2:17365850-17365869 | Msa0592170:three_prime_UTR | 60.0% |
| CCGGATCACGGGTACAAACC+AGG | + | chr4_2:17369314-17369333 | None:intergenic | 60.0% | |
| ACTCCCTTCACACCCCGCGA+AGG | + | chr4_2:17367398-17367417 | None:intergenic | 65.0% | |
| TTCGCGGGGTGTGAAGGGAG+TGG | - | chr4_2:17367397-17367416 | Msa0592170:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 17365630 | 17371187 | 17365630 | ID=Msa0592170;Name=Msa0592170 |
| chr4_2 | mRNA | 17365630 | 17371187 | 17365630 | ID=Msa0592170-mRNA-1;Parent=Msa0592170;Name=Msa0592170-mRNA-1;_AED=0.09;_eAED=0.09;_QI=166|1|1|1|1|1|5|328|219 |
| chr4_2 | exon | 17365630 | 17366101 | 17365630 | ID=Msa0592170-mRNA-1:exon:5016;Parent=Msa0592170-mRNA-1 |
| chr4_2 | exon | 17366741 | 17366803 | 17366741 | ID=Msa0592170-mRNA-1:exon:5015;Parent=Msa0592170-mRNA-1 |
| chr4_2 | exon | 17367838 | 17367958 | 17367838 | ID=Msa0592170-mRNA-1:exon:5014;Parent=Msa0592170-mRNA-1 |
| chr4_2 | exon | 17368044 | 17368185 | 17368044 | ID=Msa0592170-mRNA-1:exon:5013;Parent=Msa0592170-mRNA-1 |
| chr4_2 | exon | 17370832 | 17371187 | 17370832 | ID=Msa0592170-mRNA-1:exon:5012;Parent=Msa0592170-mRNA-1 |
| chr4_2 | five_prime_UTR | 17371022 | 17371187 | 17371022 | ID=Msa0592170-mRNA-1:five_prime_utr;Parent=Msa0592170-mRNA-1 |
| chr4_2 | CDS | 17370832 | 17371021 | 17370832 | ID=Msa0592170-mRNA-1:cds;Parent=Msa0592170-mRNA-1 |
| chr4_2 | CDS | 17368044 | 17368185 | 17368044 | ID=Msa0592170-mRNA-1:cds;Parent=Msa0592170-mRNA-1 |
| chr4_2 | CDS | 17367838 | 17367958 | 17367838 | ID=Msa0592170-mRNA-1:cds;Parent=Msa0592170-mRNA-1 |
| chr4_2 | CDS | 17366741 | 17366803 | 17366741 | ID=Msa0592170-mRNA-1:cds;Parent=Msa0592170-mRNA-1 |
| chr4_2 | CDS | 17365958 | 17366101 | 17365958 | ID=Msa0592170-mRNA-1:cds;Parent=Msa0592170-mRNA-1 |
| chr4_2 | three_prime_UTR | 17365630 | 17365957 | 17365630 | ID=Msa0592170-mRNA-1:three_prime_utr;Parent=Msa0592170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
