Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251920 | XP_003596038.1 | 87.773 | 458 | 8 | 3 | 1 | 450 | 1 | 418 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251920 | sp|Q9SAJ6|G3PP1_ARATH | 77.340 | 406 | 45 | 2 | 53 | 450 | 56 | 422 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251920 | G7IQT1 | 87.773 | 458 | 8 | 3 | 1 | 450 | 1 | 418 | 0.0 | 791 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021290 | Msa0251920 | 0.809539 | 1.800255e-50 | -8.615850e-47 |
| Msa0021320 | Msa0251920 | 0.803556 | 3.294672e-49 | -8.615850e-47 |
| Msa0037180 | Msa0251920 | 0.804741 | 1.867760e-49 | -8.615850e-47 |
| Msa0040860 | Msa0251920 | -0.800251 | 1.572971e-48 | -8.615850e-47 |
| Msa0066680 | Msa0251920 | -0.818780 | 1.639397e-52 | -8.615850e-47 |
| Msa0092220 | Msa0251920 | 0.830993 | 2.147864e-55 | -8.615850e-47 |
| Msa0127910 | Msa0251920 | -0.809238 | 2.088261e-50 | -8.615850e-47 |
| Msa0192050 | Msa0251920 | 0.805373 | 1.377402e-49 | -8.615850e-47 |
| Msa0251920 | Msa0265250 | 0.801747 | 7.781582e-49 | -8.615850e-47 |
| Msa0251920 | Msa0290800 | 0.836974 | 6.830080e-57 | -8.615850e-47 |
| Msa0251920 | Msa0328870 | 0.810227 | 1.280025e-50 | -8.615850e-47 |
| Msa0251920 | Msa0358470 | 0.830856 | 2.320224e-55 | -8.615850e-47 |
| Msa0251920 | Msa0390590 | -0.812049 | 5.153529e-51 | -8.615850e-47 |
| Msa0251920 | Msa0397130 | 0.819028 | 1.440261e-52 | -8.615850e-47 |
| Msa0251920 | Msa0427260 | -0.801359 | 9.346921e-49 | -8.615850e-47 |
| Msa0251920 | Msa0452770 | 0.818109 | 2.326310e-52 | -8.615850e-47 |
| Msa0251920 | Msa0468660 | 0.806255 | 8.991277e-50 | -8.615850e-47 |
| Msa0251920 | Msa0545750 | -0.802167 | 6.380583e-49 | -8.615850e-47 |
| Msa0251920 | Msa0563440 | 0.823081 | 1.678611e-53 | -8.615850e-47 |
| Msa0251920 | Msa0592170 | 0.801003 | 1.105311e-48 | -8.615850e-47 |
| Msa0251920 | Msa0601380 | 0.815839 | 7.527487e-52 | -8.615850e-47 |
| Msa0251920 | Msa0610240 | -0.808052 | 3.743102e-50 | -8.615850e-47 |
| Msa0251920 | Msa0660150 | 0.802491 | 5.470803e-49 | -8.615850e-47 |
| Msa0251920 | Msa0703430 | -0.811321 | 7.423066e-51 | -8.615850e-47 |
| Msa0251920 | Msa0721930 | 0.800376 | 1.483673e-48 | -8.615850e-47 |
| Msa0251920 | Msa0805390 | 0.800761 | 1.238140e-48 | -8.615850e-47 |
| Msa0251920 | Msa0807870 | -0.816933 | 4.282882e-52 | -8.615850e-47 |
| Msa0251920 | Msa0868050 | -0.801284 | 9.684272e-49 | -8.615850e-47 |
| Msa0251920 | Msa0898830 | -0.816863 | 4.441895e-52 | -8.615850e-47 |
| Msa0251920 | Msa0931550 | -0.803228 | 3.852902e-49 | -8.615850e-47 |
| Msa0251920 | Msa1055520 | -0.814602 | 1.417091e-51 | -8.615850e-47 |
| Msa0251920 | Msa1063190 | 0.819947 | 8.886723e-53 | -8.615850e-47 |
| Msa0251920 | Msa1213470 | -0.833756 | 4.442349e-56 | -8.615850e-47 |
| Msa0251920 | Msa1300370 | -0.832683 | 8.219966e-56 | -8.615850e-47 |
| Msa0251920 | Msa1364110 | 0.822843 | 1.906717e-53 | -8.615850e-47 |
| Msa0251920 | Msa1384410 | -0.810536 | 1.098046e-50 | -8.615850e-47 |
| Msa0251920 | Msa1462780 | 0.801037 | 1.087832e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251920 | MtrunA17_Chr2g0310421 | 87.773 | 458 | 8 | 3 | 1 | 450 | 1 | 418 | 0.0 | 791 |
| Msa0251920 | MtrunA17_Chr6g0458861 | 63.733 | 375 | 88 | 3 | 82 | 447 | 2 | 337 | 6.87e-164 | 465 |
| Msa0251920 | MtrunA17_Chr4g0057861 | 61.725 | 371 | 94 | 3 | 83 | 444 | 5 | 336 | 2.38e-156 | 446 |
| Msa0251920 | MtrunA17_Chr3g0122971 | 60.904 | 376 | 80 | 3 | 79 | 446 | 2 | 318 | 2.40e-155 | 442 |
| Msa0251920 | MtrunA17_Chr8g0357071 | 54.795 | 292 | 79 | 3 | 163 | 443 | 59 | 308 | 2.18e-92 | 282 |
| Msa0251920 | MtrunA17_Chr3g0144151 | 43.850 | 374 | 155 | 8 | 80 | 439 | 82 | 414 | 2.70e-77 | 248 |
| Msa0251920 | MtrunA17_Chr7g0252641 | 42.391 | 368 | 160 | 6 | 83 | 439 | 69 | 395 | 4.52e-72 | 233 |
| Msa0251920 | MtrunA17_Chr8g0360951 | 72.727 | 132 | 28 | 1 | 302 | 433 | 8 | 131 | 3.37e-58 | 187 |
| Msa0251920 | MtrunA17_Chr2g0316821 | 75.510 | 49 | 12 | 0 | 335 | 383 | 7 | 55 | 1.14e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251920 | AT1G79530.1 | 77.340 | 406 | 45 | 2 | 53 | 450 | 56 | 422 | 0.0 | 625 |
| Msa0251920 | AT1G16300.1 | 70.172 | 466 | 73 | 6 | 1 | 448 | 1 | 418 | 0.0 | 617 |
| Msa0251920 | AT1G13440.1 | 62.534 | 371 | 91 | 3 | 83 | 444 | 5 | 336 | 5.43e-161 | 458 |
| Msa0251920 | AT3G04120.1 | 62.264 | 371 | 92 | 3 | 83 | 444 | 5 | 336 | 3.08e-160 | 456 |
| Msa0251920 | AT1G13440.2 | 57.143 | 371 | 83 | 4 | 83 | 444 | 5 | 308 | 3.34e-138 | 399 |
| Msa0251920 | AT1G42970.1 | 42.416 | 389 | 166 | 9 | 65 | 439 | 66 | 410 | 4.37e-82 | 260 |
| Msa0251920 | AT1G12900.3 | 43.127 | 371 | 159 | 6 | 80 | 439 | 12 | 341 | 1.02e-75 | 241 |
| Msa0251920 | AT1G12900.4 | 43.127 | 371 | 159 | 6 | 80 | 439 | 12 | 341 | 1.02e-75 | 241 |
| Msa0251920 | AT1G12900.1 | 43.478 | 368 | 156 | 6 | 83 | 439 | 64 | 390 | 1.44e-75 | 242 |
| Msa0251920 | AT1G12900.5 | 43.127 | 371 | 159 | 6 | 80 | 439 | 103 | 432 | 1.66e-75 | 243 |
| Msa0251920 | AT3G26650.1 | 42.391 | 368 | 160 | 6 | 83 | 439 | 61 | 387 | 2.89e-73 | 236 |
| Msa0251920 | AT1G12900.2 | 42.294 | 279 | 112 | 4 | 170 | 439 | 70 | 308 | 1.70e-48 | 169 |
Find 139 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTACTGTGTTCTCAATTT+TGG | 0.050097 | 2_2:+42357398 | None:intergenic |
| TTCTTCCTCCGATCGCTTTC+AGG | 0.138089 | 2_2:-42363102 | Msa0251920:intron |
| CTGCTTAGGTTCTCAGATTT+TGG | 0.157529 | 2_2:-42357317 | Msa0251920:three_prime_UTR |
| GACACTACTTTGGAAATTAA+TGG | 0.219682 | 2_2:-42359953 | Msa0251920:CDS |
| CAAGGGAACTATTAAGGTTT+TGG | 0.236598 | 2_2:-42359978 | Msa0251920:CDS |
| GAGATCCCTTGGGGTGATTT+TGG | 0.243709 | 2_2:-42359754 | Msa0251920:CDS |
| AGGTTGCAAAACAACATATT+TGG | 0.249949 | 2_2:-42361881 | Msa0251920:CDS |
| ACCATTCAAGGGAACTATTA+AGG | 0.249959 | 2_2:-42359984 | Msa0251920:CDS |
| TATAAGATTGCAGACATATC+TGG | 0.257462 | 2_2:-42357277 | Msa0251920:three_prime_UTR |
| TTTCTCAGCGGAGGTTCTTA+TGG | 0.301926 | 2_2:+42363287 | None:intergenic |
| CATTGTCCTGGTTACCTGTT+TGG | 0.319707 | 2_2:-42357189 | Msa0251920:three_prime_UTR |
| TTCATAGTTGTTGTTGTTGT+TGG | 0.333825 | 2_2:-42363225 | Msa0251920:five_prime_UTR |
| ACACTACTTTGGAAATTAAT+GGG | 0.345611 | 2_2:-42359952 | Msa0251920:CDS |
| GGACAATTGAAGGGAATTCT+TGG | 0.359064 | 2_2:-42358210 | Msa0251920:CDS |
| GTTAAAATTAGTGGCTGCTT+AGG | 0.363077 | 2_2:-42357331 | Msa0251920:three_prime_UTR |
| AAAGTCCTTCCTGAACTAAA+TGG | 0.364181 | 2_2:-42358463 | Msa0251920:CDS |
| AAAACCAGAGAACACATTCT+AGG | 0.370927 | 2_2:-42363194 | Msa0251920:five_prime_UTR |
| ATATATTTAGCATCAATAAA+AGG | 0.371726 | 2_2:+42360775 | None:intergenic |
| CCTCTCCAGTCCTTCATTGA+AGG | 0.373035 | 2_2:+42358629 | None:intergenic |
| ATGAGTTAGGTTAAAATTAG+TGG | 0.375145 | 2_2:-42357340 | Msa0251920:three_prime_UTR |
| GCATTGAGAATATAATAAAA+AGG | 0.377456 | 2_2:-42357213 | Msa0251920:three_prime_UTR |
| TCCGTTGCTGTAGCCTTGAT+AGG | 0.388359 | 2_2:+42361694 | None:intergenic |
| TCATCTATTTCTTCCTCTGT+TGG | 0.390292 | 2_2:+42357247 | None:intergenic |
| TGTAGGGCACATGGCATTGG+TGG | 0.391459 | 2_2:-42357425 | Msa0251920:CDS |
| TGCTGCTTTGACATCTTCAT+AGG | 0.396446 | 2_2:+42358357 | None:intergenic |
| ATCTCTTACCTTTGCAGCAC+CGG | 0.404038 | 2_2:+42358568 | None:intergenic |
| GACTATGTCATTGAGTCTTC+AGG | 0.404219 | 2_2:-42359727 | Msa0251920:CDS |
| TTCTGATATTTCCATGAGTT+AGG | 0.404414 | 2_2:-42357353 | Msa0251920:three_prime_UTR |
| CTATTTCTTCCTCTGTTGGA+GGG | 0.407388 | 2_2:+42357251 | None:intergenic |
| TGTTCAGACTCAAGCAGCAC+TGG | 0.408024 | 2_2:-42361574 | Msa0251920:intron |
| TGCTTCAGAGGGACAATTGA+AGG | 0.410485 | 2_2:-42358220 | Msa0251920:CDS |
| AGGGCACATGGCATTGGTGG+GGG | 0.418998 | 2_2:-42357422 | Msa0251920:CDS |
| ATGACTTCGTTGGTGATTCA+AGG | 0.419617 | 2_2:-42358161 | Msa0251920:intron |
| TTTGATGCTAAGGCAGGGAT+TGG | 0.422198 | 2_2:-42357795 | Msa0251920:CDS |
| GAGGAGTTTGGTATAGTTGA+AGG | 0.431859 | 2_2:-42358821 | Msa0251920:CDS |
| TTTGCAGCACCGGTTGAACT+TGG | 0.432818 | 2_2:+42358578 | None:intergenic |
| TGCTGATGCACCTATGTTTG+TGG | 0.433580 | 2_2:-42359517 | Msa0251920:CDS |
| GAAAGCTTCATCGCATTTGA+AGG | 0.438996 | 2_2:-42359686 | Msa0251920:intron |
| ACCTTAATAGTTCCCTTGAA+TGG | 0.439866 | 2_2:+42359983 | None:intergenic |
| TCTATTTCTTCCTCTGTTGG+AGG | 0.442263 | 2_2:+42357250 | None:intergenic |
| AATATAATTCCAAGTTCAAC+CGG | 0.443199 | 2_2:-42358587 | Msa0251920:CDS |
| GCTCCTTTCACCTTCTCCAA+TGG | 0.454079 | 2_2:-42363165 | Msa0251920:exon |
| TAGGTGGTTCACGAGGAGTT+TGG | 0.457879 | 2_2:-42358833 | Msa0251920:CDS |
| AGATCCCGTGGAGATCCCTT+GGG | 0.460691 | 2_2:-42359764 | Msa0251920:CDS |
| TGTTACGTGTAGCTACTTCC+CGG | 0.461798 | 2_2:-42360828 | Msa0251920:CDS |
| TTTGGAAATTAATGGGAAGC+AGG | 0.462994 | 2_2:-42359945 | Msa0251920:CDS |
| TACAAAGACTAATTCCAAAC+AGG | 0.464567 | 2_2:+42357175 | None:intergenic |
| TAGCAAGTCTTTCGTGAAGC+TGG | 0.466758 | 2_2:-42357769 | Msa0251920:CDS |
| GAGATCCCGTGGAGATCCCT+TGG | 0.467742 | 2_2:-42359765 | Msa0251920:CDS |
| GTGATTCAGGTGCTTGGCAA+TGG | 0.469384 | 2_2:-42361929 | Msa0251920:intron |
| TTCCACTCATGGACCATTCA+AGG | 0.469698 | 2_2:-42359996 | Msa0251920:CDS |
| AAGACAAGGGTTGGAATTAA+CGG | 0.470607 | 2_2:-42361550 | Msa0251920:intron |
| CCTTGATAGGCTGCATACTC+CGG | 0.471067 | 2_2:+42361707 | None:intergenic |
| CCTTGTAGGGCACATGGCAT+TGG | 0.471246 | 2_2:-42357428 | Msa0251920:CDS |
| GTAGGGCACATGGCATTGGT+GGG | 0.474551 | 2_2:-42357424 | Msa0251920:CDS |
| AGGTTAAAGTTGTGAGCAAA+AGG | 0.476874 | 2_2:-42359925 | Msa0251920:intron |
| GTTTCTGTGATTCAGGTGCT+TGG | 0.477598 | 2_2:-42361935 | Msa0251920:intron |
| CTTGTAAACATGTAAAGTAA+TGG | 0.477738 | 2_2:+42358713 | None:intergenic |
| ACAACTGTGCATGCAACAAC+AGG | 0.478163 | 2_2:-42358791 | Msa0251920:CDS |
| GCAACACAAAAGACTGTAGA+TGG | 0.480151 | 2_2:-42358653 | Msa0251920:CDS |
| GTATTATACTGACTTTGTAC+AGG | 0.481565 | 2_2:+42361661 | None:intergenic |
| TATTTCTTCCTCTGTTGGAG+GGG | 0.488605 | 2_2:+42357252 | None:intergenic |
| TGCTCAGAAACTGCAATGCC+CGG | 0.488935 | 2_2:-42361726 | Msa0251920:intron |
| TTGATGCTAAGGCAGGGATT+GGG | 0.489330 | 2_2:-42357794 | Msa0251920:CDS |
| GAACCCTAGAATGTGTTCTC+TGG | 0.490183 | 2_2:+42363190 | None:intergenic |
| TAGGGCACATGGCATTGGTG+GGG | 0.502489 | 2_2:-42357423 | Msa0251920:CDS |
| GTCGAGTATCTTTGATGCTA+AGG | 0.502777 | 2_2:-42357805 | Msa0251920:CDS |
| ACCGAGTGTTGGACCTTGTA+GGG | 0.506658 | 2_2:-42357441 | Msa0251920:CDS |
| AGTATCTTTGATGCTAAGGC+AGG | 0.509425 | 2_2:-42357801 | Msa0251920:CDS |
| CTTCAATGAAGGACTGGAGA+GGG | 0.510255 | 2_2:-42358628 | Msa0251920:CDS |
| TTCAAGTATGATTCCACTCA+TGG | 0.511189 | 2_2:-42360007 | Msa0251920:CDS |
| AGAAGAGAAGAAGCGGCCAT+TGG | 0.511286 | 2_2:+42363149 | None:intergenic |
| GAACTAAATGGAAAACTCAC+TGG | 0.516497 | 2_2:-42358451 | Msa0251920:CDS |
| AAACCAGAGAACACATTCTA+GGG | 0.522408 | 2_2:-42363193 | Msa0251920:five_prime_UTR |
| AAAATGAAGGCTTGCTTCAG+AGG | 0.524629 | 2_2:-42358232 | Msa0251920:intron |
| TGCTTTGACATCTTCATAGG+AGG | 0.524744 | 2_2:+42358360 | None:intergenic |
| TTGTCTTGCACCTCTTGCCA+AGG | 0.529996 | 2_2:-42359427 | Msa0251920:intron |
| CCGGAGTATGCAGCCTATCA+AGG | 0.530927 | 2_2:-42361707 | Msa0251920:CDS |
| GAAGAAGCGGCCATTGGAGA+AGG | 0.532216 | 2_2:+42363155 | None:intergenic |
| TACTGACTTTGTACAGGGAG+AGG | 0.536453 | 2_2:+42361667 | None:intergenic |
| TTCAATGAAGGACTGGAGAG+GGG | 0.536458 | 2_2:-42358627 | Msa0251920:CDS |
| AAGTTCAACCGGTGCTGCAA+AGG | 0.540468 | 2_2:-42358576 | Msa0251920:intron |
| CCAATGCCATGTGCCCTACA+AGG | 0.542207 | 2_2:+42357428 | None:intergenic |
| CAAGCAGCACTGGGAAGACA+AGG | 0.543034 | 2_2:-42361564 | Msa0251920:CDS |
| CTGTCGTGGACTTAACCTGC+CGG | 0.543870 | 2_2:-42358396 | Msa0251920:CDS |
| TTTATGAAATCCCAGGCTGT+TGG | 0.545504 | 2_2:-42358487 | Msa0251920:intron |
| CTTGATAGGCTGCATACTCC+GGG | 0.548665 | 2_2:+42361708 | None:intergenic |
| CGGCCATTGGAGAAGGTGAA+AGG | 0.548721 | 2_2:+42363162 | None:intergenic |
| ATGGTCCTTCAATGAAGGAC+TGG | 0.549721 | 2_2:-42358634 | Msa0251920:CDS |
| CTAATTCCAAACAGGTAACC+AGG | 0.553135 | 2_2:+42357183 | None:intergenic |
| GCCTATCAAGGCTACAGCAA+CGG | 0.553472 | 2_2:-42361695 | Msa0251920:CDS |
| CCATTGCAGCAACCGAGTGT+TGG | 0.556820 | 2_2:-42357452 | Msa0251920:intron |
| AAATGGAAAACTCACTGGAA+TGG | 0.557070 | 2_2:-42358446 | Msa0251920:CDS |
| TGAAAGCGATCGGAGGAAGA+AGG | 0.558306 | 2_2:+42363104 | None:intergenic |
| AACCGAGTGTTGGACCTTGT+AGG | 0.560181 | 2_2:-42357442 | Msa0251920:CDS |
| GTTCAGACTCAAGCAGCACT+GGG | 0.562033 | 2_2:-42361573 | Msa0251920:intron |
| ACTGACTTTGTACAGGGAGA+GGG | 0.564116 | 2_2:+42361668 | None:intergenic |
| CAACAACATCAATATCATCC+CGG | 0.566243 | 2_2:+42360809 | None:intergenic |
| TGTAGATGGTCCTTCAATGA+AGG | 0.566615 | 2_2:-42358639 | Msa0251920:CDS |
| TCCACTCATGGACCATTCAA+GGG | 0.568117 | 2_2:-42359995 | Msa0251920:CDS |
| ACAGTAGTGTCTCTTACTGT+TGG | 0.570601 | 2_2:-42357384 | Msa0251920:three_prime_UTR |
| AGCACTGGGAAGACAAGGGT+TGG | 0.575636 | 2_2:-42361559 | Msa0251920:CDS |
| TACTGCTAATGTTTCTGTCG+TGG | 0.577340 | 2_2:-42358410 | Msa0251920:CDS |
| GCCCTACAAGGTCCAACACT+CGG | 0.580688 | 2_2:+42357440 | None:intergenic |
| TACTTTCTGTAGAGATCCCG+TGG | 0.585583 | 2_2:-42359776 | Msa0251920:intron |
| AGAAGAGACCTGAAAGCGAT+CGG | 0.585617 | 2_2:+42363094 | None:intergenic |
| GTTACGTGTAGCTACTTCCC+GGG | 0.586207 | 2_2:-42360827 | Msa0251920:CDS |
| AACATAGGTGCATCAGCAGA+TGG | 0.588893 | 2_2:+42359522 | None:intergenic |
| ATCTGGAACCCCTCCAACAG+AGG | 0.589131 | 2_2:-42357260 | Msa0251920:three_prime_UTR |
| TCCCTTGAATGGTCCATGAG+TGG | 0.590101 | 2_2:+42359994 | None:intergenic |
| AAATGAAGGCTTGCTTCAGA+GGG | 0.591059 | 2_2:-42358231 | Msa0251920:intron |
| TCACCCCAAGGGATCTCCAC+GGG | 0.591324 | 2_2:+42359760 | None:intergenic |
| AACAACATCAATATCATCCC+GGG | 0.598146 | 2_2:+42360810 | None:intergenic |
| TGCAAACAAACCTTGGCAAG+AGG | 0.603999 | 2_2:+42359417 | None:intergenic |
| AGATCTGAGAAGAGAAGAAG+CGG | 0.606427 | 2_2:+42363142 | None:intergenic |
| TATTATACTGACTTTGTACA+GGG | 0.606576 | 2_2:+42361662 | None:intergenic |
| GCTTCAGAGGGACAATTGAA+GGG | 0.606877 | 2_2:-42358219 | Msa0251920:CDS |
| GATGCACCTATGTTTGTGGT+AGG | 0.612197 | 2_2:-42359513 | Msa0251920:CDS |
| GTTAGAAACAATGTCCATGT+TGG | 0.613153 | 2_2:+42359467 | None:intergenic |
| TCAATGAAGGACTGGAGAGG+GGG | 0.616736 | 2_2:-42358626 | Msa0251920:CDS |
| GTATCTTTGATGCTAAGGCA+GGG | 0.617944 | 2_2:-42357800 | Msa0251920:CDS |
| CTTTCGTGAAGCTGGTCTCG+TGG | 0.621248 | 2_2:-42357761 | Msa0251920:intron |
| CCTTCAATGAAGGACTGGAG+AGG | 0.623553 | 2_2:-42358629 | Msa0251920:CDS |
| TTCACTCCTACCACAAACAT+AGG | 0.625799 | 2_2:+42359507 | None:intergenic |
| GTTGGACCTTGTAGGGCACA+TGG | 0.628754 | 2_2:-42357434 | Msa0251920:CDS |
| GTTGTCTCTAATGACTTCGT+TGG | 0.630337 | 2_2:-42358171 | Msa0251920:CDS |
| ATCACCCCAAGGGATCTCCA+CGG | 0.651353 | 2_2:+42359759 | None:intergenic |
| TCAGCACCAAAATCACCCCA+AGG | 0.653762 | 2_2:+42359748 | None:intergenic |
| ACGACAGAAACATTAGCAGT+AGG | 0.663380 | 2_2:+42358412 | None:intergenic |
| TATTCGTTAGGTGGTTCACG+AGG | 0.668429 | 2_2:-42358840 | Msa0251920:intron |
| GGAAGAAGGTGAAGAAACGA+TGG | 0.669878 | 2_2:+42363118 | None:intergenic |
| AGAGACCTGAAAGCGATCGG+AGG | 0.670276 | 2_2:+42363097 | None:intergenic |
| GATCCCGTGGAGATCCCTTG+GGG | 0.670881 | 2_2:-42359763 | Msa0251920:CDS |
| TGTAAGACTAATGAATCACA+TGG | 0.671569 | 2_2:+42361848 | None:intergenic |
| GAAGACATACAACTCCAACA+TGG | 0.678082 | 2_2:-42359481 | Msa0251920:CDS |
| AATTCTTGGATACACAGATG+AGG | 0.683849 | 2_2:-42358196 | Msa0251920:CDS |
| CAGCACCAAAATCACCCCAA+GGG | 0.691447 | 2_2:+42359749 | None:intergenic |
| AAGCAGCACTGGGAAGACAA+GGG | 0.707230 | 2_2:-42361563 | Msa0251920:CDS |
| GTATTAGTTCAATGTCTACG+AGG | 0.774170 | 2_2:-42361901 | Msa0251920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAAACCATTTTTTA+TGG | - | chr2_2:42358307-42358326 | Msa0251920:intron | 10.0% |
| !!! | TTTTTAAAACCATTTTTTAT+GGG | - | chr2_2:42358308-42358327 | Msa0251920:intron | 10.0% |
| !! | GAATATGATAAAATATTATA+TGG | + | chr2_2:42359043-42359062 | None:intergenic | 10.0% |
| !! | AAAATATAACATGAAATATT+AGG | + | chr2_2:42359402-42359421 | None:intergenic | 10.0% |
| !!! | TTTCATGTTATATTTTAATT+TGG | - | chr2_2:42359406-42359425 | Msa0251920:intron | 10.0% |
| !!! | AATCTAAAATATTAACATAA+CGG | + | chr2_2:42359865-42359884 | None:intergenic | 10.0% |
| !! | ATATTAAAATAAAAACCTAT+AGG | - | chr2_2:42361296-42361315 | Msa0251920:intron | 10.0% |
| !! | ATCATATACATTTATTAAAT+TGG | - | chr2_2:42361916-42361935 | Msa0251920:CDS | 10.0% |
| !!! | TGATTTTGAAATTAAGTTAA+GGG | - | chr2_2:42357482-42357501 | Msa0251920:intron | 15.0% |
| !!! | AAATGATTGTATTTGTTTTT+AGG | - | chr2_2:42357803-42357822 | Msa0251920:CDS | 15.0% |
| !!! | TAAAAATGACAAAAAAGTTT+TGG | - | chr2_2:42358226-42358245 | Msa0251920:CDS | 15.0% |
| !!! | AAGTTATTTCTTTATATTTC+TGG | - | chr2_2:42359147-42359166 | Msa0251920:intron | 15.0% |
| !!! | AGTTATTTCTTTATATTTCT+GGG | - | chr2_2:42359148-42359167 | Msa0251920:intron | 15.0% |
| !! | ATATATTTAGCATCAATAAA+AGG | + | chr2_2:42359662-42359681 | None:intergenic | 15.0% |
| !!! | TTTTATTGATGCTAAATATA+TGG | - | chr2_2:42359661-42359680 | Msa0251920:intron | 15.0% |
| !!! | ATCTAAAATATTAACATAAC+GGG | + | chr2_2:42359864-42359883 | None:intergenic | 15.0% |
| !!! | TATTCTTTTTATTTCAGTTA+TGG | - | chr2_2:42360310-42360329 | Msa0251920:intron | 15.0% |
| !! | ATACATTTATTAAATTGGTT+TGG | - | chr2_2:42361921-42361940 | Msa0251920:CDS | 15.0% |
| !! | AAAGAGTTACATTTAAATTA+AGG | + | chr2_2:42362602-42362621 | None:intergenic | 15.0% |
| !! | TTTGTATTACAGTAAAATAA+GGG | + | chr2_2:42362862-42362881 | None:intergenic | 15.0% |
| !! | ATTTGTATTACAGTAAAATA+AGG | + | chr2_2:42362863-42362882 | None:intergenic | 15.0% |
| !!! | CTGATTTTGAAATTAAGTTA+AGG | - | chr2_2:42357481-42357500 | Msa0251920:intron | 20.0% |
| !!! | AAATCTATATTTTGTCTTTG+AGG | - | chr2_2:42357630-42357649 | Msa0251920:intron | 20.0% |
| !!! | ATTGTATTTGTTTTTAGGTT+CGG | - | chr2_2:42357808-42357827 | Msa0251920:CDS | 20.0% |
| !!! | AAAAATTGGTTTAAGAAAGT+TGG | - | chr2_2:42357872-42357891 | Msa0251920:intron | 20.0% |
| !! | TCTCAAATATAAGCAAAAAT+TGG | + | chr2_2:42357925-42357944 | None:intergenic | 20.0% |
| !! | ACTACACTACAATAAAAAAA+GGG | + | chr2_2:42358109-42358128 | None:intergenic | 20.0% |
| !! | TTTCTTAGTTTATAAGTATC+TGG | + | chr2_2:42359002-42359021 | None:intergenic | 20.0% |
| !!! | AAATTTTAAGGATATATTCC+AGG | + | chr2_2:42359521-42359540 | None:intergenic | 20.0% |
| !! | TATAAAAATCATAGCAAAGA+TGG | + | chr2_2:42360130-42360149 | None:intergenic | 20.0% |
| !!! | ATCTTTGCTATGATTTTTAT+AGG | - | chr2_2:42360129-42360148 | Msa0251920:intron | 20.0% |
| !!! | TCTTTGCTATGATTTTTATA+GGG | - | chr2_2:42360130-42360149 | Msa0251920:intron | 20.0% |
| !!! | TCTAAAACATGAAAAGAAAT+TGG | - | chr2_2:42360225-42360244 | Msa0251920:intron | 20.0% |
| !! | AGAGTAGAAAAAAATTAAAG+AGG | + | chr2_2:42360357-42360376 | None:intergenic | 20.0% |
| !!! | CTTATCTTTTTCTACTATAT+AGG | - | chr2_2:42360860-42360879 | Msa0251920:intron | 20.0% |
| !!! | AGCTGATATTATGATTTTTT+TGG | + | chr2_2:42360892-42360911 | None:intergenic | 20.0% |
| !! | TTGAGAAAAATGTATATTTC+AGG | + | chr2_2:42361178-42361197 | None:intergenic | 20.0% |
| !! | GATCTATTTGAATCAATATA+AGG | - | chr2_2:42361427-42361446 | Msa0251920:intron | 20.0% |
| !! | ATTTCATGATACAAATGATT+TGG | - | chr2_2:42362403-42362422 | Msa0251920:intron | 20.0% |
| !! | TTTCATGATACAAATGATTT+GGG | - | chr2_2:42362404-42362423 | Msa0251920:intron | 20.0% |
| !! | ACTCAAACTAATAAGATTAT+AGG | + | chr2_2:42362537-42362556 | None:intergenic | 20.0% |
| !!! | TTTAAATTAAGGTGTTCATT+TGG | + | chr2_2:42362591-42362610 | None:intergenic | 20.0% |
| !! | GCATTGAGAATATAATAAAA+AGG | - | chr2_2:42363221-42363240 | Msa0251920:five_prime_UTR | 20.0% |
| ! | TAGAAAATGAAGAATACAAG+AGG | + | chr2_2:42357382-42357401 | None:intergenic | 25.0% |
| ! | TTCTCTATTACGATTATTTG+TGG | - | chr2_2:42357444-42357463 | Msa0251920:CDS | 25.0% |
| !! | TCGAAATTTAAGCTTACTTT+TGG | - | chr2_2:42357598-42357617 | Msa0251920:intron | 25.0% |
| !!! | TTTAAGCTTACTTTTGGATT+TGG | - | chr2_2:42357604-42357623 | Msa0251920:intron | 25.0% |
| ! | TTGAGGAAGTGAAAATTTAT+TGG | - | chr2_2:42357647-42357666 | Msa0251920:intron | 25.0% |
| !! | AACATTGCAATATTTTCCTT+TGG | - | chr2_2:42357706-42357725 | Msa0251920:intron | 25.0% |
| ! | TAAACTATATTTCAAGCCAA+AGG | + | chr2_2:42357725-42357744 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTTCGGAAAATAT+AGG | - | chr2_2:42357818-42357837 | Msa0251920:intron | 25.0% |
| ! | TCTCAATTATGAGCAAAAAT+TGG | - | chr2_2:42357858-42357877 | Msa0251920:intron | 25.0% |
| ! | TGTAGTGTTAGTTAAAAAAC+AGG | - | chr2_2:42358001-42358020 | Msa0251920:intron | 25.0% |
| ! | GTAGTGTTAGTTAAAAAACA+GGG | - | chr2_2:42358002-42358021 | Msa0251920:intron | 25.0% |
| ! | CTACACTACAATAAAAAAAG+GGG | + | chr2_2:42358108-42358127 | None:intergenic | 25.0% |
| ! | CACTACACTACAATAAAAAA+AGG | + | chr2_2:42358110-42358129 | None:intergenic | 25.0% |
| ! | TACAATAGGAACTTCTATAT+TGG | + | chr2_2:42358185-42358204 | None:intergenic | 25.0% |
| ! | AATATAGAAGTTCCTATTGT+AGG | - | chr2_2:42358184-42358203 | Msa0251920:CDS | 25.0% |
| ! | ATATAGAAGTTCCTATTGTA+GGG | - | chr2_2:42358185-42358204 | Msa0251920:CDS | 25.0% |
| !!! | AAAAGTTTTGGAGACTAAAA+TGG | - | chr2_2:42358238-42358257 | Msa0251920:intron | 25.0% |
| !!! | AAAGTTTTGGAGACTAAAAT+GGG | - | chr2_2:42358239-42358258 | Msa0251920:intron | 25.0% |
| !! | TATTTTGCTTATCATTTCGT+AGG | - | chr2_2:42358427-42358446 | Msa0251920:CDS | 25.0% |
| ! | ATTTAACATGCATAAAAGTC+AGG | + | chr2_2:42358464-42358483 | None:intergenic | 25.0% |
| ! | ACAATTGAAACAACAAAAAC+CGG | + | chr2_2:42358662-42358681 | None:intergenic | 25.0% |
| !!! | TATTATACTGACTTTGTACA+GGG | + | chr2_2:42358775-42358794 | None:intergenic | 25.0% |
| !!! | ACAATTATTTTGCGTGTATT+TGG | - | chr2_2:42358794-42358813 | Msa0251920:CDS | 25.0% |
| !!! | CAATTATTTTGCGTGTATTT+GGG | - | chr2_2:42358795-42358814 | Msa0251920:CDS | 25.0% |
| ! | ATCATATTCCTGTTTCATTT+AGG | - | chr2_2:42359054-42359073 | Msa0251920:intron | 25.0% |
| ! | ATGACTACAATTAAAAGATG+CGG | + | chr2_2:42359333-42359352 | None:intergenic | 25.0% |
| !! | ACGCAAGCTTAAAAATTTTA+AGG | + | chr2_2:42359533-42359552 | None:intergenic | 25.0% |
| ! | TATATTTAAACAATGCTGCT+CGG | - | chr2_2:42359891-42359910 | Msa0251920:intron | 25.0% |
| !!! | TGGAAAATTGAGTTTTTCAA+AGG | + | chr2_2:42360110-42360129 | None:intergenic | 25.0% |
| !! | TTTATAGGGTGTTTAAAGTT+TGG | - | chr2_2:42360144-42360163 | Msa0251920:intron | 25.0% |
| !! | TTATAGGGTGTTTAAAGTTT+GGG | - | chr2_2:42360145-42360164 | Msa0251920:intron | 25.0% |
| !!! | TTTTAGAATATCTATCCTCA+TGG | + | chr2_2:42360212-42360231 | None:intergenic | 25.0% |
| !!! | TTTTTATTTCAGTTATGGTC+AGG | - | chr2_2:42360315-42360334 | Msa0251920:intron | 25.0% |
| !! | ACACTACTTTGGAAATTAAT+GGG | - | chr2_2:42360482-42360501 | Msa0251920:intron | 25.0% |
| !! | TAGAAAATTCTTAGTGCTTT+TGG | - | chr2_2:42361101-42361120 | Msa0251920:intron | 25.0% |
| !! | AGAAAATTCTTAGTGCTTTT+GGG | - | chr2_2:42361102-42361121 | Msa0251920:intron | 25.0% |
| ! | AAGTCTGATATCATCTATTT+AGG | - | chr2_2:42361140-42361159 | Msa0251920:intron | 25.0% |
| ! | AGTCTGATATCATCTATTTA+GGG | - | chr2_2:42361141-42361160 | Msa0251920:intron | 25.0% |
| ! | GATCTATTATTCTTTCCTTA+AGG | - | chr2_2:42361229-42361248 | Msa0251920:intron | 25.0% |
| ! | GTAATATCTCTTTCAATACA+AGG | - | chr2_2:42361362-42361381 | Msa0251920:intron | 25.0% |
| ! | AGGTTGAATCAAAACATAAT+GGG | + | chr2_2:42361475-42361494 | None:intergenic | 25.0% |
| ! | TTTCTGACATGAACAAAATA+AGG | + | chr2_2:42361539-42361558 | None:intergenic | 25.0% |
| ! | TCCATAAACTATTATTCGTT+AGG | - | chr2_2:42361582-42361601 | Msa0251920:intron | 25.0% |
| ! | ACCTAACGAATAATAGTTTA+TGG | + | chr2_2:42361586-42361605 | None:intergenic | 25.0% |
| ! | ATAAACTATTATTCGTTAGG+TGG | - | chr2_2:42361585-42361604 | Msa0251920:intron | 25.0% |
| ! | AAAAGAGAAAAAGAAAGCAA+AGG | + | chr2_2:42361694-42361713 | None:intergenic | 25.0% |
| !! | TTTGCTTTCTTTTTCTCTTT+TGG | - | chr2_2:42361693-42361712 | Msa0251920:CDS | 25.0% |
| ! | CTTGTAAACATGTAAAGTAA+TGG | + | chr2_2:42361724-42361743 | None:intergenic | 25.0% |
| ! | AATATAATTCCAAGTTCAAC+CGG | - | chr2_2:42361847-42361866 | Msa0251920:intron | 25.0% |
| ! | AATAATAGAAAACAACCGAA+GGG | + | chr2_2:42362169-42362188 | None:intergenic | 25.0% |
| ! | AAATAATAGAAAACAACCGA+AGG | + | chr2_2:42362170-42362189 | None:intergenic | 25.0% |
| !!! | TTGGGTTATATTACTTTTGT+TGG | - | chr2_2:42362422-42362441 | Msa0251920:intron | 25.0% |
| !!! | AAAACAAAGGTCTTGTTTTA+TGG | + | chr2_2:42362504-42362523 | None:intergenic | 25.0% |
| ! | TTGAGTTTGTATTATTGTCT+TGG | - | chr2_2:42362551-42362570 | Msa0251920:intron | 25.0% |
| ! | TGAGTTTGTATTATTGTCTT+GGG | - | chr2_2:42362552-42362571 | Msa0251920:intron | 25.0% |
| !! | TAAATGTAACTCTTTTGAAC+AGG | - | chr2_2:42362607-42362626 | Msa0251920:intron | 25.0% |
| ! | CAGTAAAATAAGGGAAAATT+TGG | + | chr2_2:42362853-42362872 | None:intergenic | 25.0% |
| !!! | ACTAATTTTAACCTAACTCA+TGG | + | chr2_2:42363095-42363114 | None:intergenic | 25.0% |
| ! | ATGAGTTAGGTTAAAATTAG+TGG | - | chr2_2:42363094-42363113 | Msa0251920:intron | 25.0% |
| !!! | TAAACACTCTTTTTTCTCAG+CGG | + | chr2_2:42357162-42357181 | None:intergenic | 30.0% |
| ! | TTCATAGTTGTTGTTGTTGT+TGG | - | chr2_2:42357209-42357228 | Msa0251920:three_prime_UTR | 30.0% |
| ATGCGAAAAATACACATTTC+AGG | + | chr2_2:42357751-42357770 | None:intergenic | 30.0% | |
| GTTAGTTAAAAAACAGGGTA+AGG | - | chr2_2:42358007-42358026 | Msa0251920:intron | 30.0% | |
| TATAGAAGTTCCTATTGTAG+GGG | - | chr2_2:42358186-42358205 | Msa0251920:CDS | 30.0% | |
| AGGTTGCAAAACAACATATT+TGG | - | chr2_2:42358553-42358572 | Msa0251920:intron | 30.0% | |
| TGTAAGACTAATGAATCACA+TGG | + | chr2_2:42358589-42358608 | None:intergenic | 30.0% | |
| GAGCACTAATTAAAATTGCT+GGG | + | chr2_2:42358621-42358640 | None:intergenic | 30.0% | |
| ! | AGAGCACTAATTAAAATTGC+TGG | + | chr2_2:42358622-42358641 | None:intergenic | 30.0% |
| !! | GTATTATACTGACTTTGTAC+AGG | + | chr2_2:42358776-42358795 | None:intergenic | 30.0% |
| CATTACATCCTAAATGAAAC+AGG | + | chr2_2:42359065-42359084 | None:intergenic | 30.0% | |
| !!! | ACACATTTTTTTCAATGTGC+AGG | - | chr2_2:42359560-42359579 | Msa0251920:intron | 30.0% |
| !!! | TTTTTTCAATGTGCAGGTTT+TGG | - | chr2_2:42359566-42359585 | Msa0251920:intron | 30.0% |
| CTTATAAGATGCTCATAGTT+TGG | - | chr2_2:42359714-42359733 | Msa0251920:CDS | 30.0% | |
| TATTTAGACATGTTGGCAAT+AGG | - | chr2_2:42359915-42359934 | Msa0251920:intron | 30.0% | |
| ACAACTGTAGAAAAGGTAAA+AGG | + | chr2_2:42360025-42360044 | None:intergenic | 30.0% | |
| CAATTGTACAACTGTAGAAA+AGG | + | chr2_2:42360032-42360051 | None:intergenic | 30.0% | |
| TGTACAATTGCACAAAACTT+AGG | - | chr2_2:42360042-42360061 | Msa0251920:intron | 30.0% | |
| ! | CGTCTTAACTTTTATCTTTC+AGG | - | chr2_2:42360396-42360415 | Msa0251920:intron | 30.0% |
| ! | GACACTACTTTGGAAATTAA+TGG | - | chr2_2:42360481-42360500 | Msa0251920:intron | 30.0% |
| CAACATCAATTTCAATTAGC+AGG | + | chr2_2:42360550-42360569 | None:intergenic | 30.0% | |
| ACGTACAGCTATAAAAACAT+TGG | - | chr2_2:42360610-42360629 | Msa0251920:intron | 30.0% | |
| AGAGAAAAAACTAAATGCAC+AGG | + | chr2_2:42360790-42360809 | None:intergenic | 30.0% | |
| AAGCTCAAATTAAGATCTGA+AGG | + | chr2_2:42360843-42360862 | None:intergenic | 30.0% | |
| ! | TCTTTTTCTACTATATAGGC+TGG | - | chr2_2:42360864-42360883 | Msa0251920:intron | 30.0% |
| ! | GAAAATTCTTAGTGCTTTTG+GGG | - | chr2_2:42361103-42361122 | Msa0251920:intron | 30.0% |
| GAAAGAATAATAGATCAAGC+GGG | + | chr2_2:42361225-42361244 | None:intergenic | 30.0% | |
| GGAAAGAATAATAGATCAAG+CGG | + | chr2_2:42361226-42361245 | None:intergenic | 30.0% | |
| TATTCCAGGATATATCCTTA+AGG | + | chr2_2:42361247-42361266 | None:intergenic | 30.0% | |
| !!! | ATCCTGGAATAGACTTTTTT+TGG | - | chr2_2:42361256-42361275 | Msa0251920:intron | 30.0% |
| !!! | TCCTGGAATAGACTTTTTTT+GGG | - | chr2_2:42361257-42361276 | Msa0251920:intron | 30.0% |
| TGTGAATTTCATGATCCTAT+AGG | + | chr2_2:42361314-42361333 | None:intergenic | 30.0% | |
| TATAGGATCATGAAATTCAC+AGG | - | chr2_2:42361313-42361332 | Msa0251920:intron | 30.0% | |
| ATTGATAGAAGTGAACTGTA+TGG | - | chr2_2:42361394-42361413 | Msa0251920:intron | 30.0% | |
| ! | GCTTTTGCATGATAATTATG+TGG | - | chr2_2:42361449-42361468 | Msa0251920:intron | 30.0% |
| ! | CAGGTTGAATCAAAACATAA+TGG | + | chr2_2:42361476-42361495 | None:intergenic | 30.0% |
| ! | TTGGTATTTTATGAAATCCC+AGG | - | chr2_2:42361940-42361959 | Msa0251920:intron | 30.0% |
| TTAGTACAAAACAACTCAAC+AGG | + | chr2_2:42362146-42362165 | None:intergenic | 30.0% | |
| TTGCGACTGAAAAAAAATGA+AGG | - | chr2_2:42362189-42362208 | Msa0251920:intron | 30.0% | |
| TTACTATCGACATCTTCAAT+TGG | - | chr2_2:42362328-42362347 | Msa0251920:intron | 30.0% | |
| CAGCATGTATACTTGATAAA+AGG | + | chr2_2:42362365-42362384 | None:intergenic | 30.0% | |
| !! | CAGGATCTGTTTTAAACAAA+AGG | + | chr2_2:42362476-42362495 | None:intergenic | 30.0% |
| !!! | ACAAGACCTTTGTTTTATCT+TGG | - | chr2_2:42362508-42362527 | Msa0251920:intron | 30.0% |
| ! | TTTTAAATTGTGGTTCGCAA+CGG | - | chr2_2:42362778-42362797 | Msa0251920:intron | 30.0% |
| ! | ACTACTGTGTTCTCAATTTT+GGG | + | chr2_2:42363038-42363057 | None:intergenic | 30.0% |
| TTCTGATATTTCCATGAGTT+AGG | - | chr2_2:42363081-42363100 | Msa0251920:intron | 30.0% | |
| TATAAGATTGCAGACATATC+TGG | - | chr2_2:42363157-42363176 | Msa0251920:exon | 30.0% | |
| TAATAAAAAGGACATTGTCC+TGG | - | chr2_2:42363233-42363252 | Msa0251920:five_prime_UTR | 30.0% | |
| TACAAAGACTAATTCCAAAC+AGG | + | chr2_2:42363262-42363281 | None:intergenic | 30.0% | |
| ! | ATAGTTGTTGTTGTTGTTGG+TGG | - | chr2_2:42357212-42357231 | Msa0251920:three_prime_UTR | 35.0% |
| AAAACCAGAGAACACATTCT+AGG | - | chr2_2:42357240-42357259 | Msa0251920:three_prime_UTR | 35.0% | |
| AAACCAGAGAACACATTCTA+GGG | - | chr2_2:42357241-42357260 | Msa0251920:three_prime_UTR | 35.0% | |
| ACAAGAGGATCAAAAAGAAG+AGG | + | chr2_2:42357367-42357386 | None:intergenic | 35.0% | |
| ! | TTGCTTATATTTGAGACCAG+AGG | - | chr2_2:42357929-42357948 | Msa0251920:intron | 35.0% |
| ! | TGCTTATATTTGAGACCAGA+GGG | - | chr2_2:42357930-42357949 | Msa0251920:intron | 35.0% |
| !!! | GGAGTATTGATTTTAGGTCT+TGG | - | chr2_2:42357951-42357970 | Msa0251920:intron | 35.0% |
| TTGCGTACAATACACCAAAA+TGG | - | chr2_2:42358030-42358049 | Msa0251920:intron | 35.0% | |
| GTACAATACACCAAAATGGT+GGG | - | chr2_2:42358034-42358053 | Msa0251920:intron | 35.0% | |
| TAGTTAATCCAGAACAGAAG+TGG | - | chr2_2:42358131-42358150 | Msa0251920:intron | 35.0% | |
| GACGAACATCCCATAAAAAA+TGG | + | chr2_2:42358320-42358339 | None:intergenic | 35.0% | |
| ACAGCATCTTTCAGATAATC+AGG | + | chr2_2:42358342-42358361 | None:intergenic | 35.0% | |
| TGATTATCTGAAAGATGCTG+TGG | - | chr2_2:42358341-42358360 | Msa0251920:intron | 35.0% | |
| AAACCTCTTCACAACAATGA+AGG | + | chr2_2:42358387-42358406 | None:intergenic | 35.0% | |
| TTTGCTTATCATTTCGTAGG+TGG | - | chr2_2:42358430-42358449 | Msa0251920:CDS | 35.0% | |
| GTATTAGTTCAATGTCTACG+AGG | - | chr2_2:42358533-42358552 | Msa0251920:intron | 35.0% | |
| ! | CTTCTTTTTCTCTCATTTGC+CGG | - | chr2_2:42358640-42358659 | Msa0251920:CDS | 35.0% |
| !! | TTATTTTGCGTGTATTTGGG+TGG | - | chr2_2:42358798-42358817 | Msa0251920:CDS | 35.0% |
| AAGACAAGGGTTGGAATTAA+CGG | - | chr2_2:42358884-42358903 | Msa0251920:intron | 35.0% | |
| ATAAGTATCTGGCACGAAAT+TGG | + | chr2_2:42358991-42359010 | None:intergenic | 35.0% | |
| ATATGGAATGCAAAGCTTGT+AGG | + | chr2_2:42359026-42359045 | None:intergenic | 35.0% | |
| TCCTGTTTAGAAGATTTGCA+TGG | - | chr2_2:42359289-42359308 | Msa0251920:intron | 35.0% | |
| ACCATGCAAATCTTCTAAAC+AGG | + | chr2_2:42359293-42359312 | None:intergenic | 35.0% | |
| !! | TTTTGGAAGAATTGGAAGGT+TGG | - | chr2_2:42359583-42359602 | Msa0251920:intron | 35.0% |
| AACAACATCAATATCATCCC+GGG | + | chr2_2:42359627-42359646 | None:intergenic | 35.0% | |
| CAACAACATCAATATCATCC+CGG | + | chr2_2:42359628-42359647 | None:intergenic | 35.0% | |
| ATTGAACAGAGTCTTTAACC+AGG | + | chr2_2:42359747-42359766 | None:intergenic | 35.0% | |
| !! | TGAGTTTTTCAAAGGACTAG+AGG | + | chr2_2:42360102-42360121 | None:intergenic | 35.0% |
| TTCAAGTATGATTCCACTCA+TGG | - | chr2_2:42360427-42360446 | Msa0251920:intron | 35.0% | |
| ACCATTCAAGGGAACTATTA+AGG | - | chr2_2:42360450-42360469 | Msa0251920:intron | 35.0% | |
| ACCTTAATAGTTCCCTTGAA+TGG | + | chr2_2:42360454-42360473 | None:intergenic | 35.0% | |
| ! | CAAGGGAACTATTAAGGTTT+TGG | - | chr2_2:42360456-42360475 | Msa0251920:intron | 35.0% |
| TTTGGAAATTAATGGGAAGC+AGG | - | chr2_2:42360489-42360508 | Msa0251920:intron | 35.0% | |
| AGGTTAAAGTTGTGAGCAAA+AGG | - | chr2_2:42360509-42360528 | Msa0251920:intron | 35.0% | |
| AGAGTAAGGTAAAGGAGAAT+AGG | + | chr2_2:42360815-42360834 | None:intergenic | 35.0% | |
| CTCAAATTAAGATCTGAAGG+TGG | + | chr2_2:42360840-42360859 | None:intergenic | 35.0% | |
| GTTAGAAACAATGTCCATGT+TGG | + | chr2_2:42360970-42360989 | None:intergenic | 35.0% | |
| CTTTCCTTAAGGATATATCC+TGG | - | chr2_2:42361240-42361259 | Msa0251920:intron | 35.0% | |
| !!! | CCTGGAATAGACTTTTTTTG+GGG | - | chr2_2:42361258-42361277 | Msa0251920:intron | 35.0% |
| AAAGTCCTTCCTGAACTAAA+TGG | - | chr2_2:42361971-42361990 | Msa0251920:intron | 35.0% | |
| !! | GTTTTCCATTTAGTTCAGGA+AGG | + | chr2_2:42361979-42361998 | None:intergenic | 35.0% |
| !! | GTGAGTTTTCCATTTAGTTC+AGG | + | chr2_2:42361983-42362002 | None:intergenic | 35.0% |
| GAACTAAATGGAAAACTCAC+TGG | - | chr2_2:42361983-42362002 | Msa0251920:intron | 35.0% | |
| AAATGGAAAACTCACTGGAA+TGG | - | chr2_2:42361988-42362007 | Msa0251920:intron | 35.0% | |
| !! | GTTGTTTTGTACTAACCCTT+CGG | - | chr2_2:42362151-42362170 | Msa0251920:intron | 35.0% |
| AATTCTTGGATACACAGATG+AGG | - | chr2_2:42362238-42362257 | Msa0251920:intron | 35.0% | |
| CAAGTATACATGCTGAAATG+TGG | - | chr2_2:42362370-42362389 | Msa0251920:intron | 35.0% | |
| !!! | GTCTTGTTTTATGGCAAATC+AGG | + | chr2_2:42362495-42362514 | None:intergenic | 35.0% |
| AGGAGACCAAGATAAAACAA+AGG | + | chr2_2:42362517-42362536 | None:intergenic | 35.0% | |
| !!! | GCACACATGGTTTTAAATTG+TGG | - | chr2_2:42362768-42362787 | Msa0251920:intron | 35.0% |
| CTTCAAAATCCACGATATTG+AGG | + | chr2_2:42362813-42362832 | None:intergenic | 35.0% | |
| ! | GAGATTTTAAATTGCAGTCG+TGG | + | chr2_2:42362899-42362918 | None:intergenic | 35.0% |
| ! | CACTACTGTGTTCTCAATTT+TGG | + | chr2_2:42363039-42363058 | None:intergenic | 35.0% |
| GTTAAAATTAGTGGCTGCTT+AGG | - | chr2_2:42363103-42363122 | Msa0251920:CDS | 35.0% | |
| ! | TCATCTATTTCTTCCTCTGT+TGG | + | chr2_2:42363190-42363209 | None:intergenic | 35.0% |
| AGATCTGAGAAGAGAAGAAG+CGG | + | chr2_2:42357295-42357314 | None:intergenic | 40.0% | |
| CAGAAAGAAAACAACAGAGC+TGG | - | chr2_2:42357679-42357698 | Msa0251920:intron | 40.0% | |
| TGCTCATAATTGAGACCAGA+GGG | + | chr2_2:42357853-42357872 | None:intergenic | 40.0% | |
| TTGCTCATAATTGAGACCAG+AGG | + | chr2_2:42357854-42357873 | None:intergenic | 40.0% | |
| CCTAAAATCAATACTCCCTC+TGG | + | chr2_2:42357948-42357967 | None:intergenic | 40.0% | |
| !!! | CCAGAGGGAGTATTGATTTT+AGG | - | chr2_2:42357945-42357964 | Msa0251920:intron | 40.0% |
| CGTACAATACACCAAAATGG+TGG | - | chr2_2:42358033-42358052 | Msa0251920:intron | 40.0% | |
| CAATAAAAAAAGGGGCAGCT+TGG | + | chr2_2:42358100-42358119 | None:intergenic | 40.0% | |
| AGCTAAATCCACTTCTGTTC+TGG | + | chr2_2:42358142-42358161 | None:intergenic | 40.0% | |
| ! | AGAAGTGGATTTAGCTGACA+GGG | - | chr2_2:42358146-42358165 | Msa0251920:intron | 40.0% |
| ! | AAAAAGTGTGCCCCTACAAT+AGG | + | chr2_2:42358199-42358218 | None:intergenic | 40.0% |
| !!! | ATTGTAGGGGCACACTTTTT+TGG | - | chr2_2:42358199-42358218 | Msa0251920:CDS | 40.0% |
| !!! | TTGTAGGGGCACACTTTTTT+GGG | - | chr2_2:42358200-42358219 | Msa0251920:CDS | 40.0% |
| ! | TGCTGTGGAAATTTTTCTGC+TGG | - | chr2_2:42358356-42358375 | Msa0251920:CDS | 40.0% |
| ACTCCTTCATTGTTGTGAAG+AGG | - | chr2_2:42358381-42358400 | Msa0251920:CDS | 40.0% | |
| AAGCACCTGAATCACAGAAA+CGG | + | chr2_2:42358500-42358519 | None:intergenic | 40.0% | |
| GTAAACTTTGCTACAAAGCC+TGG | - | chr2_2:42359500-42359519 | Msa0251920:CDS | 40.0% | |
| !!! | TGTGCAGGTTTTGGAAGAAT+TGG | - | chr2_2:42359575-42359594 | Msa0251920:intron | 40.0% |
| !!! | CAGGTTTTGGAAGAATTGGA+AGG | - | chr2_2:42359579-42359598 | Msa0251920:intron | 40.0% |
| TCATAGTTTGGTTGTTGTCC+TGG | - | chr2_2:42359726-42359745 | Msa0251920:CDS | 40.0% | |
| ! | TAACATAACGGGAAACAACG+AGG | + | chr2_2:42359853-42359872 | None:intergenic | 40.0% |
| GCTCGGATATTTAGACATGT+TGG | - | chr2_2:42359908-42359927 | Msa0251920:intron | 40.0% | |
| TATGCTGATCCTGATTCAGT+TGG | - | chr2_2:42359965-42359984 | Msa0251920:CDS | 40.0% | |
| CAGAACATTCCAACTGAATC+AGG | + | chr2_2:42359977-42359996 | None:intergenic | 40.0% | |
| !! | GTTTTTCAAAGGACTAGAGG+AGG | + | chr2_2:42360099-42360118 | None:intergenic | 40.0% |
| TTCAGTTATGGTCAGGTACT+AGG | - | chr2_2:42360322-42360341 | Msa0251920:intron | 40.0% | |
| !!! | GGTTTTGGATGACACTACTT+TGG | - | chr2_2:42360471-42360490 | Msa0251920:intron | 40.0% |
| ATGTTGCAAGTATGCGTTAC+TGG | - | chr2_2:42360564-42360583 | Msa0251920:intron | 40.0% | |
| ! | TTACTGGTTGCCAGTATTTG+TGG | - | chr2_2:42360580-42360599 | Msa0251920:intron | 40.0% |
| CGTAACACTTCCACAAATAC+TGG | + | chr2_2:42360593-42360612 | None:intergenic | 40.0% | |
| GACTATGTCATTGAGTCTTC+AGG | - | chr2_2:42360707-42360726 | Msa0251920:intron | 40.0% | |
| GAAAGCTTCATCGCATTTGA+AGG | - | chr2_2:42360748-42360767 | Msa0251920:intron | 40.0% | |
| TTCACTCCTACCACAAACAT+AGG | + | chr2_2:42360930-42360949 | None:intergenic | 40.0% | |
| GAAGACATACAACTCCAACA+TGG | - | chr2_2:42360953-42360972 | Msa0251920:intron | 40.0% | |
| TACGCAATGCAAACAAACCT+TGG | + | chr2_2:42361027-42361046 | None:intergenic | 40.0% | |
| AGGAGGGAACTCAATAAAGA+TGG | + | chr2_2:42361053-42361072 | None:intergenic | 40.0% | |
| TTTATTGAGTTCCCTCCTCT+TGG | - | chr2_2:42361055-42361074 | Msa0251920:intron | 40.0% | |
| AGGACTTGGAAAATGACAAG+TGG | - | chr2_2:42361078-42361097 | Msa0251920:intron | 40.0% | |
| CCCCAAAAAAAGTCTATTCC+AGG | + | chr2_2:42361261-42361280 | None:intergenic | 40.0% | |
| GAGGAGTTTGGTATAGTTGA+AGG | - | chr2_2:42361613-42361632 | Msa0251920:intron | 40.0% | |
| GCAACACAAAAGACTGTAGA+TGG | - | chr2_2:42361781-42361800 | Msa0251920:intron | 40.0% | |
| TGTAGATGGTCCTTCAATGA+AGG | - | chr2_2:42361795-42361814 | Msa0251920:intron | 40.0% | |
| TTTATGAAATCCCAGGCTGT+TGG | - | chr2_2:42361947-42361966 | Msa0251920:intron | 40.0% | |
| ACGACAGAAACATTAGCAGT+AGG | + | chr2_2:42362025-42362044 | None:intergenic | 40.0% | |
| ! | TACTGCTAATGTTTCTGTCG+TGG | - | chr2_2:42362024-42362043 | Msa0251920:intron | 40.0% |
| TGCTTTGACATCTTCATAGG+AGG | + | chr2_2:42362077-42362096 | None:intergenic | 40.0% | |
| !! | TGCTGCTTTGACATCTTCAT+AGG | + | chr2_2:42362080-42362099 | None:intergenic | 40.0% |
| ! | AGTCTCTTGTTTATCTGCTC+TGG | - | chr2_2:42362108-42362127 | Msa0251920:intron | 40.0% |
| ! | AAAATGAAGGCTTGCTTCAG+AGG | - | chr2_2:42362202-42362221 | Msa0251920:intron | 40.0% |
| ! | AAATGAAGGCTTGCTTCAGA+GGG | - | chr2_2:42362203-42362222 | Msa0251920:intron | 40.0% |
| GGACAATTGAAGGGAATTCT+TGG | - | chr2_2:42362224-42362243 | Msa0251920:intron | 40.0% | |
| GTTGTCTCTAATGACTTCGT+TGG | - | chr2_2:42362263-42362282 | Msa0251920:intron | 40.0% | |
| !! | ATGACTTCGTTGGTGATTCA+AGG | - | chr2_2:42362273-42362292 | Msa0251920:intron | 40.0% |
| GTCGAGTATCTTTGATGCTA+AGG | - | chr2_2:42362629-42362648 | Msa0251920:intron | 40.0% | |
| AGTATCTTTGATGCTAAGGC+AGG | - | chr2_2:42362633-42362652 | Msa0251920:intron | 40.0% | |
| GTATCTTTGATGCTAAGGCA+GGG | - | chr2_2:42362634-42362653 | Msa0251920:intron | 40.0% | |
| ATAGACTAGTAGTGCACACA+TGG | - | chr2_2:42362755-42362774 | Msa0251920:intron | 40.0% | |
| !!! | GGATTTTGAAGTCTCAGCAA+CGG | - | chr2_2:42362822-42362841 | Msa0251920:intron | 40.0% |
| ACAGTAGTGTCTCTTACTGT+TGG | - | chr2_2:42363050-42363069 | Msa0251920:intron | 40.0% | |
| ! | CTGCTTAGGTTCTCAGATTT+TGG | - | chr2_2:42363117-42363136 | Msa0251920:CDS | 40.0% |
| TATTTCTTCCTCTGTTGGAG+GGG | + | chr2_2:42363185-42363204 | None:intergenic | 40.0% | |
| ! | CTATTTCTTCCTCTGTTGGA+GGG | + | chr2_2:42363186-42363205 | None:intergenic | 40.0% |
| ! | TCTATTTCTTCCTCTGTTGG+AGG | + | chr2_2:42363187-42363206 | None:intergenic | 40.0% |
| CTAATTCCAAACAGGTAACC+AGG | + | chr2_2:42363254-42363273 | None:intergenic | 40.0% | |
| TTTCTCAGCGGAGGTTCTTA+TGG | + | chr2_2:42357150-42357169 | None:intergenic | 45.0% | |
| !!! | ACACTCTTTTTTCTCAGCGG+AGG | + | chr2_2:42357159-42357178 | None:intergenic | 45.0% |
| GAACCCTAGAATGTGTTCTC+TGG | + | chr2_2:42357247-42357266 | None:intergenic | 45.0% | |
| GGAAGAAGGTGAAGAAACGA+TGG | + | chr2_2:42357319-42357338 | None:intergenic | 45.0% | |
| AGAAGAGACCTGAAAGCGAT+CGG | + | chr2_2:42357343-42357362 | None:intergenic | 45.0% | |
| ! | CAGAAGTGGATTTAGCTGAC+AGG | - | chr2_2:42358145-42358164 | Msa0251920:intron | 45.0% |
| !!! | TGTAGGGGCACACTTTTTTG+GGG | - | chr2_2:42358201-42358220 | Msa0251920:CDS | 45.0% |
| GTTTCTGTGATTCAGGTGCT+TGG | - | chr2_2:42358499-42358518 | Msa0251920:intron | 45.0% | |
| ! | ACTGACTTTGTACAGGGAGA+GGG | + | chr2_2:42358769-42358788 | None:intergenic | 45.0% |
| !! | TACTGACTTTGTACAGGGAG+AGG | + | chr2_2:42358770-42358789 | None:intergenic | 45.0% |
| TGTTACGTGTAGCTACTTCC+CGG | - | chr2_2:42359606-42359625 | Msa0251920:intron | 45.0% | |
| TCAGTACAGTACATGCCATG+AGG | - | chr2_2:42360194-42360213 | Msa0251920:intron | 45.0% | |
| TTCCACTCATGGACCATTCA+AGG | - | chr2_2:42360438-42360457 | Msa0251920:intron | 45.0% | |
| TCCACTCATGGACCATTCAA+GGG | - | chr2_2:42360439-42360458 | Msa0251920:intron | 45.0% | |
| TACTTTCTGTAGAGATCCCG+TGG | - | chr2_2:42360658-42360677 | Msa0251920:intron | 45.0% | |
| AGGTGGCAAGAGTAAGGTAA+AGG | + | chr2_2:42360823-42360842 | None:intergenic | 45.0% | |
| ATCTGAAGGTGGCAAGAGTA+AGG | + | chr2_2:42360829-42360848 | None:intergenic | 45.0% | |
| AACATAGGTGCATCAGCAGA+TGG | + | chr2_2:42360915-42360934 | None:intergenic | 45.0% | |
| TGCTGATGCACCTATGTTTG+TGG | - | chr2_2:42360917-42360936 | Msa0251920:intron | 45.0% | |
| GATGCACCTATGTTTGTGGT+AGG | - | chr2_2:42360921-42360940 | Msa0251920:intron | 45.0% | |
| TGCAAACAAACCTTGGCAAG+AGG | + | chr2_2:42361020-42361039 | None:intergenic | 45.0% | |
| ! | CATTTTCCAAGTCCTCCAAG+AGG | + | chr2_2:42361073-42361092 | None:intergenic | 45.0% |
| TTTGATTCAACCTGAGCCAC+TGG | - | chr2_2:42361482-42361501 | Msa0251920:intron | 45.0% | |
| TATTCGTTAGGTGGTTCACG+AGG | - | chr2_2:42361594-42361613 | Msa0251920:intron | 45.0% | |
| ACAACTGTGCATGCAACAAC+AGG | - | chr2_2:42361643-42361662 | Msa0251920:intron | 45.0% | |
| ATGGTCCTTCAATGAAGGAC+TGG | - | chr2_2:42361800-42361819 | Msa0251920:intron | 45.0% | |
| CTTCAATGAAGGACTGGAGA+GGG | - | chr2_2:42361806-42361825 | Msa0251920:intron | 45.0% | |
| TTCAATGAAGGACTGGAGAG+GGG | - | chr2_2:42361807-42361826 | Msa0251920:intron | 45.0% | |
| ATCTCTTACCTTTGCAGCAC+CGG | + | chr2_2:42361869-42361888 | None:intergenic | 45.0% | |
| !!! | AGGAGGCATTCTTTTGAAGC+CGG | + | chr2_2:42362060-42362079 | None:intergenic | 45.0% |
| TGCTTCAGAGGGACAATTGA+AGG | - | chr2_2:42362214-42362233 | Msa0251920:intron | 45.0% | |
| GCTTCAGAGGGACAATTGAA+GGG | - | chr2_2:42362215-42362234 | Msa0251920:intron | 45.0% | |
| AAAAGGCAGCTTGCGTTCTA+TGG | + | chr2_2:42362459-42362478 | None:intergenic | 45.0% | |
| TTTGATGCTAAGGCAGGGAT+TGG | - | chr2_2:42362639-42362658 | Msa0251920:intron | 45.0% | |
| TTGATGCTAAGGCAGGGATT+GGG | - | chr2_2:42362640-42362659 | Msa0251920:intron | 45.0% | |
| TAGCAAGTCTTTCGTGAAGC+TGG | - | chr2_2:42362665-42362684 | Msa0251920:intron | 45.0% | |
| TCTCGTGGTATGACAATGAG+TGG | - | chr2_2:42362688-42362707 | Msa0251920:intron | 45.0% | |
| CTCGTGGTATGACAATGAGT+GGG | - | chr2_2:42362689-42362708 | Msa0251920:intron | 45.0% | |
| TCGTGGTATGACAATGAGTG+GGG | - | chr2_2:42362690-42362709 | Msa0251920:intron | 45.0% | |
| ATGACAATGAGTGGGGTTAC+AGG | - | chr2_2:42362697-42362716 | Msa0251920:intron | 45.0% | |
| CAAATGTGGCCTCAATATCG+TGG | - | chr2_2:42362801-42362820 | Msa0251920:intron | 45.0% | |
| TCTCATGCATCTCATGCACA+TGG | - | chr2_2:42362915-42362934 | Msa0251920:intron | 45.0% | |
| CTCATGCATCTCATGCACAT+GGG | - | chr2_2:42362916-42362935 | Msa0251920:intron | 45.0% | |
| CATTGTCCTGGTTACCTGTT+TGG | - | chr2_2:42363245-42363264 | Msa0251920:five_prime_UTR | 45.0% | |
| !!! | ATTTTAAAAAAATTTACAAA+TGG | - | chr2_2:42359351-42359370 | Msa0251920:intron | 5.0% |
| !!! | TTTTAAAAAAATTTACAAAT+GGG | - | chr2_2:42359352-42359371 | Msa0251920:intron | 5.0% |
| !! | TTGAAAATATATTAAAAATA+TGG | + | chr2_2:42363287-42363306 | None:intergenic | 5.0% |
| GCTCCTTTCACCTTCTCCAA+TGG | - | chr2_2:42357269-42357288 | Msa0251920:three_prime_UTR | 50.0% | |
| AGAAGAGAAGAAGCGGCCAT+TGG | + | chr2_2:42357288-42357307 | None:intergenic | 50.0% | |
| TGAAAGCGATCGGAGGAAGA+AGG | + | chr2_2:42357333-42357352 | None:intergenic | 50.0% | |
| TTCTTCCTCCGATCGCTTTC+AGG | - | chr2_2:42357332-42357351 | Msa0251920:three_prime_UTR | 50.0% | |
| TATAGGCAGCATACTCCCTC+TGG | - | chr2_2:42357835-42357854 | Msa0251920:intron | 50.0% | |
| CTAAAGCTCCCGCATACACA+GGG | + | chr2_2:42358073-42358092 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACAC+AGG | + | chr2_2:42358074-42358093 | None:intergenic | 50.0% | |
| GTGGATTTAGCTGACAGGGT+AGG | - | chr2_2:42358150-42358169 | Msa0251920:intron | 50.0% | |
| CCTGAATCACAGAAACGGAC+AGG | + | chr2_2:42358495-42358514 | None:intergenic | 50.0% | |
| CCTGTCCGTTTCTGTGATTC+AGG | - | chr2_2:42358492-42358511 | Msa0251920:intron | 50.0% | |
| GTGATTCAGGTGCTTGGCAA+TGG | - | chr2_2:42358505-42358524 | Msa0251920:intron | 50.0% | |
| TGCTCAGAAACTGCAATGCC+CGG | - | chr2_2:42358708-42358727 | Msa0251920:CDS | 50.0% | |
| CTTGATAGGCTGCATACTCC+GGG | + | chr2_2:42358729-42358748 | None:intergenic | 50.0% | |
| CCTTGATAGGCTGCATACTC+CGG | + | chr2_2:42358730-42358749 | None:intergenic | 50.0% | |
| GCCTATCAAGGCTACAGCAA+CGG | - | chr2_2:42358739-42358758 | Msa0251920:CDS | 50.0% | |
| ! | TCCGTTGCTGTAGCCTTGAT+AGG | + | chr2_2:42358743-42358762 | None:intergenic | 50.0% |
| TGTTCAGACTCAAGCAGCAC+TGG | - | chr2_2:42358860-42358879 | Msa0251920:intron | 50.0% | |
| GTTCAGACTCAAGCAGCACT+GGG | - | chr2_2:42358861-42358880 | Msa0251920:intron | 50.0% | |
| ! | AAGCAGCACTGGGAAGACAA+GGG | - | chr2_2:42358871-42358890 | Msa0251920:intron | 50.0% |
| GGTGTATGCAAATCTGCGCA+TGG | - | chr2_2:42359427-42359446 | Msa0251920:intron | 50.0% | |
| GTTACGTGTAGCTACTTCCC+GGG | - | chr2_2:42359607-42359626 | Msa0251920:intron | 50.0% | |
| TCCCTTGAATGGTCCATGAG+TGG | + | chr2_2:42360443-42360462 | None:intergenic | 50.0% | |
| ! | GAGATCCCTTGGGGTGATTT+TGG | - | chr2_2:42360680-42360699 | Msa0251920:intron | 50.0% |
| CAGCACCAAAATCACCCCAA+GGG | + | chr2_2:42360688-42360707 | None:intergenic | 50.0% | |
| TCAGCACCAAAATCACCCCA+AGG | + | chr2_2:42360689-42360708 | None:intergenic | 50.0% | |
| TTGTCTTGCACCTCTTGCCA+AGG | - | chr2_2:42361007-42361026 | Msa0251920:intron | 50.0% | |
| ATTGAGTTCCCTCCTCTTGG+AGG | - | chr2_2:42361058-42361077 | Msa0251920:intron | 50.0% | |
| TTCCAAGTCCTCCAAGAGGA+GGG | + | chr2_2:42361069-42361088 | None:intergenic | 50.0% | |
| TTTCCAAGTCCTCCAAGAGG+AGG | + | chr2_2:42361070-42361089 | None:intergenic | 50.0% | |
| TAGGTGGTTCACGAGGAGTT+TGG | - | chr2_2:42361601-42361620 | Msa0251920:intron | 50.0% | |
| CCTCTCCAGTCCTTCATTGA+AGG | + | chr2_2:42361808-42361827 | None:intergenic | 50.0% | |
| CCTTCAATGAAGGACTGGAG+AGG | - | chr2_2:42361805-42361824 | Msa0251920:intron | 50.0% | |
| TCAATGAAGGACTGGAGAGG+GGG | - | chr2_2:42361808-42361827 | Msa0251920:intron | 50.0% | |
| !! | TTTGCAGCACCGGTTGAACT+TGG | + | chr2_2:42361859-42361878 | None:intergenic | 50.0% |
| !! | AAGTTCAACCGGTGCTGCAA+AGG | - | chr2_2:42361858-42361877 | Msa0251920:CDS | 50.0% |
| ! | GGTGCTGCAAAGGTAAGAGA+TGG | - | chr2_2:42361868-42361887 | Msa0251920:CDS | 50.0% |
| AAGGACTTTGCCAACAGCCT+GGG | + | chr2_2:42361960-42361979 | None:intergenic | 50.0% | |
| ! | TTGCAGTCGTGGTTGCTTTG+CGG | + | chr2_2:42362888-42362907 | None:intergenic | 50.0% |
| !! | AACCGAGTGTTGGACCTTGT+AGG | - | chr2_2:42362992-42363011 | Msa0251920:intron | 50.0% |
| !! | ACCGAGTGTTGGACCTTGTA+GGG | - | chr2_2:42362993-42363012 | Msa0251920:intron | 50.0% |
| CGGCCATTGGAGAAGGTGAA+AGG | + | chr2_2:42357275-42357294 | None:intergenic | 55.0% | |
| GAAGAAGCGGCCATTGGAGA+AGG | + | chr2_2:42357282-42357301 | None:intergenic | 55.0% | |
| AGAGACCTGAAAGCGATCGG+AGG | + | chr2_2:42357340-42357359 | None:intergenic | 55.0% | |
| CATACACAGGGTCTGGGAAG+GGG | + | chr2_2:42358061-42358080 | None:intergenic | 55.0% | |
| GCATACACAGGGTCTGGGAA+GGG | + | chr2_2:42358062-42358081 | None:intergenic | 55.0% | |
| CTTCCCAGACCCTGTGTATG+CGG | - | chr2_2:42358061-42358080 | Msa0251920:intron | 55.0% | |
| TTCCCAGACCCTGTGTATGC+GGG | - | chr2_2:42358062-42358081 | Msa0251920:intron | 55.0% | |
| CCGGAGTATGCAGCCTATCA+AGG | - | chr2_2:42358727-42358746 | Msa0251920:CDS | 55.0% | |
| ! | CAAGCAGCACTGGGAAGACA+AGG | - | chr2_2:42358870-42358889 | Msa0251920:intron | 55.0% |
| ! | AGCACTGGGAAGACAAGGGT+TGG | - | chr2_2:42358875-42358894 | Msa0251920:intron | 55.0% |
| AGATCCCGTGGAGATCCCTT+GGG | - | chr2_2:42360670-42360689 | Msa0251920:intron | 55.0% | |
| ATCACCCCAAGGGATCTCCA+CGG | + | chr2_2:42360678-42360697 | None:intergenic | 55.0% | |
| TTCCCTCCTCTTGGAGGACT+TGG | - | chr2_2:42361064-42361083 | Msa0251920:intron | 55.0% | |
| AGTTGAATCCCAGACGCCAG+TGG | + | chr2_2:42361501-42361520 | None:intergenic | 55.0% | |
| GAAGGACTTTGCCAACAGCC+TGG | + | chr2_2:42361961-42361980 | None:intergenic | 55.0% | |
| CTGTCGTGGACTTAACCTGC+CGG | - | chr2_2:42362038-42362057 | Msa0251920:intron | 55.0% | |
| !!! | GGCATTCTTTTGAAGCCGGC+AGG | + | chr2_2:42362056-42362075 | None:intergenic | 55.0% |
| ! | CTTTCGTGAAGCTGGTCTCG+TGG | - | chr2_2:42362673-42362692 | Msa0251920:intron | 55.0% |
| GTGGTTCGCAACGGCAAATG+TGG | - | chr2_2:42362787-42362806 | Msa0251920:intron | 55.0% | |
| CCAACACTCGGTTGCTGCAA+TGG | + | chr2_2:42362985-42363004 | None:intergenic | 55.0% | |
| CCATTGCAGCAACCGAGTGT+TGG | - | chr2_2:42362982-42363001 | Msa0251920:intron | 55.0% | |
| GCCCTACAAGGTCCAACACT+CGG | + | chr2_2:42362997-42363016 | None:intergenic | 55.0% | |
| GTTGGACCTTGTAGGGCACA+TGG | - | chr2_2:42363000-42363019 | Msa0251920:intron | 55.0% | |
| CCAATGCCATGTGCCCTACA+AGG | + | chr2_2:42363009-42363028 | None:intergenic | 55.0% | |
| CCTTGTAGGGCACATGGCAT+TGG | - | chr2_2:42363006-42363025 | Msa0251920:intron | 55.0% | |
| ! | TGTAGGGCACATGGCATTGG+TGG | - | chr2_2:42363009-42363028 | Msa0251920:intron | 55.0% |
| !! | GTAGGGCACATGGCATTGGT+GGG | - | chr2_2:42363010-42363029 | Msa0251920:intron | 55.0% |
| !! | TAGGGCACATGGCATTGGTG+GGG | - | chr2_2:42363011-42363030 | Msa0251920:intron | 55.0% |
| ! | ATCTGGAACCCCTCCAACAG+AGG | - | chr2_2:42363174-42363193 | Msa0251920:five_prime_UTR | 55.0% |
| ! | GGGAAGGGGTCCCACCATTT+TGG | + | chr2_2:42358047-42358066 | None:intergenic | 60.0% |
| CGCATACACAGGGTCTGGGA+AGG | + | chr2_2:42358063-42358082 | None:intergenic | 60.0% | |
| CTCCCGCATACACAGGGTCT+GGG | + | chr2_2:42358067-42358086 | None:intergenic | 60.0% | |
| GAGATCCCGTGGAGATCCCT+TGG | - | chr2_2:42360669-42360688 | Msa0251920:intron | 60.0% | |
| GATCCCGTGGAGATCCCTTG+GGG | - | chr2_2:42360671-42360690 | Msa0251920:intron | 60.0% | |
| TCACCCCAAGGGATCTCCAC+GGG | + | chr2_2:42360677-42360696 | None:intergenic | 60.0% | |
| AACCTGAGCCACTGGCGTCT+GGG | - | chr2_2:42361490-42361509 | Msa0251920:intron | 60.0% | |
| AAGGACTGGAGAGGGGGAAG+AGG | - | chr2_2:42361814-42361833 | Msa0251920:intron | 60.0% | |
| !! | AGGGCACATGGCATTGGTGG+GGG | - | chr2_2:42363012-42363031 | Msa0251920:intron | 60.0% |
| GCTCCCGCATACACAGGGTC+TGG | + | chr2_2:42358068-42358087 | None:intergenic | 65.0% | |
| CAACCTGAGCCACTGGCGTC+TGG | - | chr2_2:42361489-42361508 | Msa0251920:intron | 65.0% | |
| ATCCCAGACGCCAGTGGCTC+AGG | + | chr2_2:42361495-42361514 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 42357130 | 42363326 | 42357130 | ID=Msa0251920;Name=Msa0251920 |
| chr2_2 | mRNA | 42357130 | 42363326 | 42357130 | ID=Msa0251920-mRNA-1;Parent=Msa0251920;Name=Msa0251920-mRNA-1;_AED=0.09;_eAED=0.09;_QI=158|0.91|0.84|1|1|1|13|281|450 |
| chr2_2 | exon | 42357130 | 42357465 | 42357130 | ID=Msa0251920-mRNA-1:exon:13215;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42357762 | 42357827 | 42357762 | ID=Msa0251920-mRNA-1:exon:13214;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42358162 | 42358245 | 42358162 | ID=Msa0251920-mRNA-1:exon:13213;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42358352 | 42358494 | 42358352 | ID=Msa0251920-mRNA-1:exon:13212;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42358577 | 42358852 | 42358577 | ID=Msa0251920-mRNA-1:exon:13211;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42359428 | 42359574 | 42359428 | ID=Msa0251920-mRNA-1:exon:13210;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42359687 | 42359786 | 42359687 | ID=Msa0251920-mRNA-1:exon:13209;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42359926 | 42360038 | 42359926 | ID=Msa0251920-mRNA-1:exon:13208;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42360774 | 42360874 | 42360774 | ID=Msa0251920-mRNA-1:exon:13207;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42361551 | 42361589 | 42361551 | ID=Msa0251920-mRNA-1:exon:13206;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42361674 | 42361741 | 42361674 | ID=Msa0251920-mRNA-1:exon:13205;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42361848 | 42361942 | 42361848 | ID=Msa0251920-mRNA-1:exon:13204;Parent=Msa0251920-mRNA-1 |
| chr2_2 | exon | 42363103 | 42363326 | 42363103 | ID=Msa0251920-mRNA-1:exon:13203;Parent=Msa0251920-mRNA-1 |
| chr2_2 | five_prime_UTR | 42363169 | 42363326 | 42363169 | ID=Msa0251920-mRNA-1:five_prime_utr;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42363103 | 42363168 | 42363103 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42361848 | 42361942 | 42361848 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42361674 | 42361741 | 42361674 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42361551 | 42361589 | 42361551 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42360774 | 42360874 | 42360774 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42359926 | 42360038 | 42359926 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42359687 | 42359786 | 42359687 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42359428 | 42359574 | 42359428 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42358577 | 42358852 | 42358577 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42358352 | 42358494 | 42358352 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42358162 | 42358245 | 42358162 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42357762 | 42357827 | 42357762 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | CDS | 42357411 | 42357465 | 42357411 | ID=Msa0251920-mRNA-1:cds;Parent=Msa0251920-mRNA-1 |
| chr2_2 | three_prime_UTR | 42357130 | 42357410 | 42357130 | ID=Msa0251920-mRNA-1:three_prime_utr;Parent=Msa0251920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
