Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0410530 | Msa0597060 | 0.886875 | 2.336106e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0597060 | MtrunA17_Chr4g0019051 | 91.667 | 36 | 1 | 1 | 1 | 34 | 1 | 36 | 2.44e-14 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 49 sgRNAs with CRISPR-Local
Find 504 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGTCATTGAAACTATTT+TGG | 0.085833 | 4_2:+28891913 | Msa0597060:three_prime_UTR |
| TGATTGTCAGGTGCAATTTC+TGG | 0.125651 | 4_2:-28891360 | None:intergenic |
| TAGACGCTCATGCGAGTTTC+AGG | 0.207083 | 4_2:+28888863 | Msa0597060:intron |
| GGTCGTATTAGTACTCAATT+AGG | 0.259017 | 4_2:+28891955 | Msa0597060:three_prime_UTR |
| AAACTTATGACATGTTTAAT+AGG | 0.265647 | 4_2:+28891984 | Msa0597060:three_prime_UTR |
| AGCAATTGACCAGGTTGTTC+AGG | 0.276989 | 4_2:+28888887 | Msa0597060:CDS |
| TCCACTTCAGTTGCAGTTGC+AGG | 0.333680 | 4_2:-28891803 | None:intergenic |
| CTGAGGAAAAGCATAGAAAA+TGG | 0.336021 | 4_2:+28885180 | Msa0597060:exon |
| AAACTGTTGTACAAAGAAAA+TGG | 0.337235 | 4_2:+28891427 | Msa0597060:CDS |
| TATGTCAAACTCCTCTTAAC+AGG | 0.355223 | 4_2:-28891841 | None:intergenic |
| TGGCTGAGGCTTAGGTTTAT+CGG | 0.365334 | 4_2:-28885269 | None:intergenic |
| GACTTTGATGCAGGTTCCTT+AGG | 0.389244 | 4_2:-28891665 | None:intergenic |
| TGCCACCAAAGTAAGGCGTT+TGG | 0.433735 | 4_2:+28885237 | Msa0597060:CDS |
| TTAATCTCCACAATCAAAAT+CGG | 0.437259 | 4_2:-28892055 | None:intergenic |
| GACTTGGATGGCTGAGGCTT+AGG | 0.438229 | 4_2:-28885277 | None:intergenic |
| AACCAAACGCCTTACTTTGG+TGG | 0.446021 | 4_2:-28885239 | None:intergenic |
| AAATAAAAGCACAATCTCAT+AGG | 0.447751 | 4_2:-28891876 | None:intergenic |
| CGAAACCAAACGCCTTACTT+TGG | 0.455332 | 4_2:-28885242 | None:intergenic |
| GTTGCAGGCACTTCAACATA+AGG | 0.458120 | 4_2:-28891788 | None:intergenic |
| AAGTAAGGCGTTTGGTTTCG+AGG | 0.463141 | 4_2:+28885245 | Msa0597060:CDS |
| CTACTCTTGCCACCAAAGTA+AGG | 0.464918 | 4_2:+28885230 | Msa0597060:CDS |
| TTGCAACCTCCTTGGTGCTG+TGG | 0.465444 | 4_2:+28892014 | Msa0597060:three_prime_UTR |
| GGTTTAAAACTTACGAGACT+TGG | 0.471834 | 4_2:-28885293 | None:intergenic |
| TGTCCGCTATTCTGATTGTC+AGG | 0.478136 | 4_2:-28891372 | None:intergenic |
| GCTGATGTGCTCCTGTTAAG+AGG | 0.482144 | 4_2:+28891830 | Msa0597060:CDS |
| TTAACAGTAGTTTCTTGAAG+TGG | 0.495080 | 4_2:-28891549 | None:intergenic |
| GATTTGACAGACTTTGATGC+AGG | 0.507167 | 4_2:-28891674 | None:intergenic |
| ATCAAAGTCTGTCAAATCAA+AGG | 0.509063 | 4_2:+28891679 | Msa0597060:CDS |
| GTCGTATTAGTACTCAATTA+GGG | 0.510588 | 4_2:+28891956 | Msa0597060:three_prime_UTR |
| GCAATTGACCAGGTTGTTCA+GGG | 0.516407 | 4_2:+28888888 | Msa0597060:CDS |
| GAGCGCTTCCCTGAACAACC+TGG | 0.529553 | 4_2:-28888896 | None:intergenic |
| TCAAAGTCTGTCAAATCAAA+GGG | 0.530956 | 4_2:+28891680 | Msa0597060:CDS |
| CGGACAAGCTGCTGTAGAGT+TGG | 0.531235 | 4_2:+28891389 | Msa0597060:CDS |
| GCCTGCAACTGCAACTGAAG+TGG | 0.534825 | 4_2:+28891802 | Msa0597060:CDS |
| TCACAATGCTAGGACATGTA+AGG | 0.554869 | 4_2:+28891311 | Msa0597060:intron |
| TAAAACTTACGAGACTTGGA+TGG | 0.558322 | 4_2:-28885289 | None:intergenic |
| CTTACTTTGGTGGCAAGAGT+AGG | 0.562699 | 4_2:-28885229 | None:intergenic |
| ACTGATGTTGCTGTTGCTAA+CGG | 0.569270 | 4_2:+28891749 | Msa0597060:CDS |
| TGAAACATGCTGATTATCAA+TGG | 0.576217 | 4_2:+28888962 | Msa0597060:CDS |
| TTACGAGACTTGGATGGCTG+AGG | 0.579124 | 4_2:-28885283 | None:intergenic |
| GTTTCAGGAAGCAATTGACC+AGG | 0.593308 | 4_2:+28888878 | Msa0597060:CDS |
| CAATGCTAGGACATGTAAGG+AGG | 0.606632 | 4_2:+28891314 | Msa0597060:intron |
| GCTGTAGAGTTGGCAACACA+AGG | 0.607943 | 4_2:+28891399 | Msa0597060:CDS |
| ATTTAATTAAGGGAGACCTA+AGG | 0.625686 | 4_2:+28891649 | Msa0597060:intron |
| AATGCTAGGACATGTAAGGA+GGG | 0.645012 | 4_2:+28891315 | Msa0597060:intron |
| TAGAAGACTCATCTTGACTG+AGG | 0.653604 | 4_2:+28885163 | Msa0597060:five_prime_UTR |
| TTTACAGCACCACAGCACCA+AGG | 0.695010 | 4_2:-28892023 | None:intergenic |
| GCACCTGACAATCAGAATAG+CGG | 0.695985 | 4_2:+28891369 | Msa0597060:CDS |
| ACAGCACCACAGCACCAAGG+AGG | 0.717756 | 4_2:-28892020 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAATTATATGAAAG+TGG | - | chr4_2:28885330-28885349 | None:intergenic | 10.0% |
| !! | AAAAAAACGAAAATAAAAAA+TGG | - | chr4_2:28885658-28885677 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTCGTTTTTTTA+TGG | + | chr4_2:28885659-28885678 | Msa0597060:intron | 10.0% |
| !! | ATTAAAATATGATTATGATT+AGG | - | chr4_2:28885904-28885923 | None:intergenic | 10.0% |
| !!! | AATCATAATCATATTTTAAT+TGG | + | chr4_2:28885904-28885923 | Msa0597060:intron | 10.0% |
| !!! | ATCATAATCATATTTTAATT+GGG | + | chr4_2:28885905-28885924 | Msa0597060:intron | 10.0% |
| !!! | TAAAGTATTTTTTTACATTT+GGG | - | chr4_2:28886506-28886525 | None:intergenic | 10.0% |
| !!! | ATAAAGTATTTTTTTACATT+TGG | - | chr4_2:28886507-28886526 | None:intergenic | 10.0% |
| !!! | TTTTTATAAACTTTCAATTT+TGG | - | chr4_2:28887250-28887269 | None:intergenic | 10.0% |
| !!! | AGTTTAATATTTTTGTTAAT+TGG | - | chr4_2:28887561-28887580 | None:intergenic | 10.0% |
| !! | AATTAACAAAAATATTAAAC+TGG | + | chr4_2:28887560-28887579 | Msa0597060:intron | 10.0% |
| !! | ATTAACAAAAATATTAAACT+GGG | + | chr4_2:28887561-28887580 | Msa0597060:intron | 10.0% |
| !!! | TATTTTCCATTTATATATTA+AGG | - | chr4_2:28887802-28887821 | None:intergenic | 10.0% |
| !! | CAAAAATATTTGAATAAATT+TGG | - | chr4_2:28888766-28888785 | None:intergenic | 10.0% |
| !!! | TTATTCAAATATTTTTGTTT+TGG | + | chr4_2:28888769-28888788 | Msa0597060:intron | 10.0% |
| !!! | TATTCAAATATTTTTGTTTT+GGG | + | chr4_2:28888770-28888789 | Msa0597060:intron | 10.0% |
| !!! | TATAATTTGCTTTTTAATTA+TGG | + | chr4_2:28889748-28889767 | Msa0597060:intron | 10.0% |
| !!! | ATGGTTTAATAATTTTTTTT+TGG | + | chr4_2:28890420-28890439 | Msa0597060:intron | 10.0% |
| !! | AATAAATAAAAATAAATGCA+TGG | - | chr4_2:28891032-28891051 | None:intergenic | 10.0% |
| !! | ATTGAAATATTTGTTTGTAT+TGG | + | chr4_2:28885987-28886006 | Msa0597060:intron | 15.0% |
| !! | AAAGTTTATAAAAAAGAAGA+AGG | + | chr4_2:28887256-28887275 | Msa0597060:intron | 15.0% |
| !! | TAGTGTAATTAAAAAAAGTA+TGG | + | chr4_2:28887753-28887772 | Msa0597060:intron | 15.0% |
| !!! | AGTGTAATTAAAAAAAGTAT+GGG | + | chr4_2:28887754-28887773 | Msa0597060:intron | 15.0% |
| !! | TTTATATATTAAGGATTCAT+GGG | - | chr4_2:28887793-28887812 | None:intergenic | 15.0% |
| !! | ATTTATATATTAAGGATTCA+TGG | - | chr4_2:28887794-28887813 | None:intergenic | 15.0% |
| !! | ATGAATCCTTAATATATAAA+TGG | + | chr4_2:28887793-28887812 | Msa0597060:intron | 15.0% |
| !! | TCCATAAATATTAAAGAATA+TGG | + | chr4_2:28889364-28889383 | Msa0597060:intron | 15.0% |
| !! | ACCATATTCTTTAATATTTA+TGG | - | chr4_2:28889368-28889387 | None:intergenic | 15.0% |
| !!! | AACTATAAAAGTACTTATAT+AGG | + | chr4_2:28889488-28889507 | Msa0597060:intron | 15.0% |
| !! | TATTTCAAAAACATGTAAAA+TGG | - | chr4_2:28890341-28890360 | None:intergenic | 15.0% |
| !!! | TTAGATTTAGAATTTGAAAT+TGG | + | chr4_2:28891168-28891187 | Msa0597060:intron | 15.0% |
| !! | TTCAAATAGATATTAAGAAA+GGG | + | chr4_2:28891466-28891485 | Msa0597060:intron | 15.0% |
| !! | TGTATGTATGTATTTAATTA+AGG | + | chr4_2:28891638-28891657 | Msa0597060:intron | 15.0% |
| !! | GTATGTATGTATTTAATTAA+GGG | + | chr4_2:28891639-28891658 | Msa0597060:intron | 15.0% |
| !! | TTATAACATCTATTGAACAT+GGG | + | chr4_2:28885395-28885414 | Msa0597060:intron | 20.0% |
| !! | GGAAAATAAGTAAAAATTAG+AGG | + | chr4_2:28885613-28885632 | Msa0597060:intron | 20.0% |
| !! | TGAATCTAATTGAAATGAAT+TGG | - | chr4_2:28885694-28885713 | None:intergenic | 20.0% |
| !! | TCAAAAAAAAAAAAAGAGAC+TGG | - | chr4_2:28885756-28885775 | None:intergenic | 20.0% |
| !!! | GTCTCTTTTTTTTTTTTTGA+CGG | + | chr4_2:28885756-28885775 | Msa0597060:intron | 20.0% |
| !! | CCATAAAAAATATTGTTTCA+AGG | - | chr4_2:28885807-28885826 | None:intergenic | 20.0% |
| !!! | CCTTGAAACAATATTTTTTA+TGG | + | chr4_2:28885804-28885823 | Msa0597060:intron | 20.0% |
| !! | ATAATAAGTTACTGTATCTT+AGG | + | chr4_2:28886127-28886146 | Msa0597060:intron | 20.0% |
| !! | GTTGATCATTTAAATATCAA+TGG | - | chr4_2:28886580-28886599 | None:intergenic | 20.0% |
| !! | AAAATTATTTAATGTTGGGA+CGG | + | chr4_2:28886699-28886718 | Msa0597060:intron | 20.0% |
| !!! | ATTTTAATTTCCATAACCAA+AGG | + | chr4_2:28886879-28886898 | Msa0597060:intron | 20.0% |
| !!! | CATTTAATTTAATTAGCCTT+TGG | - | chr4_2:28886898-28886917 | None:intergenic | 20.0% |
| !! | CAAAGGCTAATTAAATTAAA+TGG | + | chr4_2:28886896-28886915 | Msa0597060:intron | 20.0% |
| !! | TCATATTCAAACTATTATCT+GGG | - | chr4_2:28886968-28886987 | None:intergenic | 20.0% |
| !!! | TTGAAATTGATTTTAGCTTT+TGG | - | chr4_2:28887213-28887232 | None:intergenic | 20.0% |
| !! | TATAAAAAAGAAGAAGGAAA+AGG | + | chr4_2:28887262-28887281 | Msa0597060:intron | 20.0% |
| !! | CACTATAAATACTAATTCAT+GGG | - | chr4_2:28887738-28887757 | None:intergenic | 20.0% |
| !! | ACACTATAAATACTAATTCA+TGG | - | chr4_2:28887739-28887758 | None:intergenic | 20.0% |
| !!! | TTTCACATTTTCAAAAGTTA+GGG | - | chr4_2:28887901-28887920 | None:intergenic | 20.0% |
| !!! | TTTTCACATTTTCAAAAGTT+AGG | - | chr4_2:28887902-28887921 | None:intergenic | 20.0% |
| !! | GAACATATAATCAATTAAAC+AGG | - | chr4_2:28888494-28888513 | None:intergenic | 20.0% |
| !!! | AGATTGTTATTAATTCTGTT+TGG | + | chr4_2:28888579-28888598 | Msa0597060:intron | 20.0% |
| !! | CTGTAAAATGAAATAAATGA+TGG | + | chr4_2:28888812-28888831 | Msa0597060:intron | 20.0% |
| !! | ATTCTTTAATATTTATGGAC+AGG | - | chr4_2:28889363-28889382 | None:intergenic | 20.0% |
| !!! | ATGAATTTTGTCTATATACT+TGG | + | chr4_2:28889416-28889435 | Msa0597060:intron | 20.0% |
| !!! | TTTTATTGTTATATGATCCT+TGG | + | chr4_2:28889928-28889947 | Msa0597060:intron | 20.0% |
| !! | TTATCAATAAAAAAACACCA+AGG | - | chr4_2:28889948-28889967 | None:intergenic | 20.0% |
| !! | TTGAAATGAATAATATAGCA+AGG | - | chr4_2:28890254-28890273 | None:intergenic | 20.0% |
| !! | TCAAAGATATCTACAAATAA+GGG | - | chr4_2:28890762-28890781 | None:intergenic | 20.0% |
| !! | ATCAAAGATATCTACAAATA+AGG | - | chr4_2:28890763-28890782 | None:intergenic | 20.0% |
| !! | ATTGAAATAGAAAATGAGAT+TGG | - | chr4_2:28890791-28890810 | None:intergenic | 20.0% |
| !! | AGATAATAAACTTCAACAAA+AGG | - | chr4_2:28891057-28891076 | None:intergenic | 20.0% |
| !! | AATTACTAAAACACACATTT+AGG | - | chr4_2:28891219-28891238 | None:intergenic | 20.0% |
| !!! | GGTAATTTTTATCTACAAAT+AGG | + | chr4_2:28891265-28891284 | Msa0597060:intron | 20.0% |
| !! | CTTCAAATAGATATTAAGAA+AGG | + | chr4_2:28891465-28891484 | Msa0597060:intron | 20.0% |
| !! | TACTGTTAATATATCCAAAA+GGG | + | chr4_2:28891563-28891582 | Msa0597060:intron | 20.0% |
| !!! | TTTATTAAAATGTACCCTTT+TGG | - | chr4_2:28891580-28891599 | None:intergenic | 20.0% |
| !! | GATAGTATATAGTAAAATGT+TGG | - | chr4_2:28891608-28891627 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTGAAACTATTT+TGG | + | chr4_2:28891913-28891932 | Msa0597060:three_prime_UTR | 20.0% |
| !!! | TTTGTCATTGAAACTATTTT+GGG | + | chr4_2:28891914-28891933 | Msa0597060:three_prime_UTR | 20.0% |
| !! | AAACTTATGACATGTTTAAT+AGG | + | chr4_2:28891984-28892003 | Msa0597060:three_prime_UTR | 20.0% |
| ! | CTTATAACATCTATTGAACA+TGG | + | chr4_2:28885394-28885413 | Msa0597060:intron | 25.0% |
| !! | CTTATTTAAGTTCTATTGAG+AGG | + | chr4_2:28885457-28885476 | Msa0597060:intron | 25.0% |
| !!! | TCAAAATATTTTTTCAGCCT+TGG | + | chr4_2:28885500-28885519 | Msa0597060:intron | 25.0% |
| ! | AGTAACTTATTATCAACCTA+GGG | - | chr4_2:28886120-28886139 | None:intergenic | 25.0% |
| !!! | TATTTTTTTACATTTGGGAC+GGG | - | chr4_2:28886501-28886520 | None:intergenic | 25.0% |
| !!! | GTATTTTTTTACATTTGGGA+CGG | - | chr4_2:28886502-28886521 | None:intergenic | 25.0% |
| ! | AAATTATTTAATGTTGGGAC+GGG | + | chr4_2:28886700-28886719 | Msa0597060:intron | 25.0% |
| ! | ATAAGATTGTAATTGCAGAT+AGG | - | chr4_2:28886853-28886872 | None:intergenic | 25.0% |
| !!! | ATTTAATTAGCCTTTGGTTA+TGG | - | chr4_2:28886892-28886911 | None:intergenic | 25.0% |
| ! | CATATTCAAACTATTATCTG+GGG | - | chr4_2:28886967-28886986 | None:intergenic | 25.0% |
| ! | CTCATATTCAAACTATTATC+TGG | - | chr4_2:28886969-28886988 | None:intergenic | 25.0% |
| !!! | AAGTTAAGACATTTAGTTTG+AGG | - | chr4_2:28887015-28887034 | None:intergenic | 25.0% |
| ! | CTTAACTTATTTGATCTTGT+CGG | + | chr4_2:28887027-28887046 | Msa0597060:intron | 25.0% |
| !!! | TTTGTTTTTTGGTAATATGC+AGG | - | chr4_2:28887335-28887354 | None:intergenic | 25.0% |
| !!! | AGTGTTGAGATTTTGTTTTT+TGG | - | chr4_2:28887346-28887365 | None:intergenic | 25.0% |
| ! | AAAACAAAATCTCAACACTA+AGG | + | chr4_2:28887347-28887366 | Msa0597060:intron | 25.0% |
| !!! | GCTAATTTTAATACATTGAG+AGG | + | chr4_2:28887401-28887420 | Msa0597060:intron | 25.0% |
| !! | ATGTAGCGTAAAAAAAGTAT+GGG | + | chr4_2:28887699-28887718 | Msa0597060:intron | 25.0% |
| !! | ATTTTCAAAAGTTAGGGTTT+TGG | - | chr4_2:28887895-28887914 | None:intergenic | 25.0% |
| ! | ATGAAAATTGAAGAGAAGAA+AGG | - | chr4_2:28888076-28888095 | None:intergenic | 25.0% |
| !! | GTGAATTTGAATTTGGAATT+TGG | - | chr4_2:28888106-28888125 | None:intergenic | 25.0% |
| !! | ATTTGGAGTGAATTTGAATT+TGG | - | chr4_2:28888113-28888132 | None:intergenic | 25.0% |
| ! | TGATGAACTTACTTATCATA+TGG | - | chr4_2:28888732-28888751 | None:intergenic | 25.0% |
| !!! | TGAAAGTCTAATTTTAGAGT+TGG | + | chr4_2:28889114-28889133 | Msa0597060:intron | 25.0% |
| !!! | TGAAAGTCTAATTTTAGAGT+TGG | + | chr4_2:28889114-28889133 | Msa0597060:intron | 25.0% |
| ! | CACAAACTAAATACTTCTTT+AGG | - | chr4_2:28889318-28889337 | None:intergenic | 25.0% |
| !!! | CTAAAGAAGTATTTAGTTTG+TGG | + | chr4_2:28889316-28889335 | Msa0597060:intron | 25.0% |
| ! | AGTTTGTGGAATCATATTAA+AGG | + | chr4_2:28889330-28889349 | Msa0597060:intron | 25.0% |
| ! | TGGAATCATATTAAAGGAAT+TGG | + | chr4_2:28889336-28889355 | Msa0597060:intron | 25.0% |
| !!! | TAAAGAATATGGTGTTTTGA+AGG | + | chr4_2:28889375-28889394 | Msa0597060:intron | 25.0% |
| !! | TTTTGTCTATATACTTGGTA+TGG | + | chr4_2:28889421-28889440 | Msa0597060:intron | 25.0% |
| !!! | AAAAGTACTTATATAGGATG+AGG | + | chr4_2:28889494-28889513 | Msa0597060:intron | 25.0% |
| ! | CTTAAGAAGAATTATCTACT+TGG | + | chr4_2:28889609-28889628 | Msa0597060:intron | 25.0% |
| ! | AATTGCGTATATTAAAGTGT+TGG | + | chr4_2:28889825-28889844 | Msa0597060:intron | 25.0% |
| !! | TTGTTTATGTTTAGCCATTT+TGG | + | chr4_2:28890214-28890233 | Msa0597060:intron | 25.0% |
| ! | ATGAATAATATAGCAAGGTA+AGG | - | chr4_2:28890249-28890268 | None:intergenic | 25.0% |
| ! | ATTTCAATCTAAAGAAACCA+TGG | + | chr4_2:28890267-28890286 | Msa0597060:intron | 25.0% |
| !! | TTTGAAATAGATGATGTCAT+AGG | + | chr4_2:28890352-28890371 | Msa0597060:intron | 25.0% |
| !! | CTCTTTCAGATTTGATAATT+TGG | + | chr4_2:28890389-28890408 | Msa0597060:intron | 25.0% |
| ! | TGATAATTTGGTCATTTACA+TGG | + | chr4_2:28890401-28890420 | Msa0597060:intron | 25.0% |
| !!! | AAGCTTTTTGAAACCTTTTT+CGG | - | chr4_2:28890848-28890867 | None:intergenic | 25.0% |
| ! | CATTAATTTCATTACTCTCA+TGG | + | chr4_2:28890874-28890893 | Msa0597060:intron | 25.0% |
| ! | AAAAATAAATGCATGGAAGA+AGG | - | chr4_2:28891025-28891044 | None:intergenic | 25.0% |
| ! | CATTCAATCAAACATGTAAA+AGG | - | chr4_2:28891092-28891111 | None:intergenic | 25.0% |
| ! | TGTTTGATTGAATGTTTGAT+TGG | + | chr4_2:28891098-28891117 | Msa0597060:intron | 25.0% |
| !! | ATTTTCTTTGTACAACAGTT+TGG | - | chr4_2:28891428-28891447 | None:intergenic | 25.0% |
| ! | AAACTGTTGTACAAAGAAAA+TGG | + | chr4_2:28891427-28891446 | Msa0597060:CDS | 25.0% |
| ! | CTACTGTTAATATATCCAAA+AGG | + | chr4_2:28891562-28891581 | Msa0597060:intron | 25.0% |
| !!! | TTTTTAGGCTTTTTCTGATT+TGG | - | chr4_2:28891707-28891726 | None:intergenic | 25.0% |
| ! | AATCAGAAAAAGCCTAAAAA+AGG | + | chr4_2:28891707-28891726 | Msa0597060:CDS | 25.0% |
| !! | AAATAAAAGCACAATCTCAT+AGG | - | chr4_2:28891879-28891898 | None:intergenic | 25.0% |
| !!! | ATGAGATTGTGCTTTTATTT+TGG | + | chr4_2:28891879-28891898 | Msa0597060:three_prime_UTR | 25.0% |
| ! | TTAATCTCCACAATCAAAAT+CGG | - | chr4_2:28892058-28892077 | None:intergenic | 25.0% |
| ATGAAAGTGGAAGAATTGAA+AGG | - | chr4_2:28885317-28885336 | None:intergenic | 30.0% | |
| TTAAGTTCTATTGAGAGGAA+AGG | + | chr4_2:28885462-28885481 | Msa0597060:intron | 30.0% | |
| AAAAACCCTAATTTGATCCA+AGG | - | chr4_2:28885520-28885539 | None:intergenic | 30.0% | |
| AGCATTAACTATTGCAGATA+GGG | + | chr4_2:28886019-28886038 | Msa0597060:intron | 30.0% | |
| ATAGAAATGTCACAAGATTC+AGG | + | chr4_2:28886081-28886100 | Msa0597060:intron | 30.0% | |
| CAGTAACTTATTATCAACCT+AGG | - | chr4_2:28886121-28886140 | None:intergenic | 30.0% | |
| !!! | GGTTTTTTTCCGTTTTGATT+AGG | + | chr4_2:28886382-28886401 | Msa0597060:intron | 30.0% |
| !!! | TTTTCCGTTTTGATTAGGTT+TGG | + | chr4_2:28886387-28886406 | Msa0597060:intron | 30.0% |
| !!! | TTTCCGTTTTGATTAGGTTT+GGG | + | chr4_2:28886388-28886407 | Msa0597060:intron | 30.0% |
| ATACCCAAACCTAATCAAAA+CGG | - | chr4_2:28886394-28886413 | None:intergenic | 30.0% | |
| !! | TTTTGATTAGGTTTGGGTAT+GGG | + | chr4_2:28886394-28886413 | Msa0597060:intron | 30.0% |
| AATTATTTAATGTTGGGACG+GGG | + | chr4_2:28886701-28886720 | Msa0597060:intron | 30.0% | |
| GTATTAAAATTAGCCGATGT+GGG | - | chr4_2:28887395-28887414 | None:intergenic | 30.0% | |
| TGTATTAAAATTAGCCGATG+TGG | - | chr4_2:28887396-28887415 | None:intergenic | 30.0% | |
| TAAGTAAACAAAGCTTTGCT+TGG | + | chr4_2:28887466-28887485 | Msa0597060:intron | 30.0% | |
| TGTTAAAAGTAACACACCAA+TGG | - | chr4_2:28887497-28887516 | None:intergenic | 30.0% | |
| GATGTAGCGTAAAAAAAGTA+TGG | + | chr4_2:28887698-28887717 | Msa0597060:intron | 30.0% | |
| ! | AAAAAAAGTATGGGTACATG+AGG | + | chr4_2:28887708-28887727 | Msa0597060:intron | 30.0% |
| ! | AAAAAAAGTATGGGTACATG+AGG | + | chr4_2:28887708-28887727 | Msa0597060:intron | 30.0% |
| AAAATTGAAGAAGATGCCTA+GGG | - | chr4_2:28887850-28887869 | None:intergenic | 30.0% | |
| TAAAATTGAAGAAGATGCCT+AGG | - | chr4_2:28887851-28887870 | None:intergenic | 30.0% | |
| ! | AATTAGCCAATAGAAGCATA+AGG | + | chr4_2:28887974-28887993 | Msa0597060:intron | 30.0% |
| ACAACAGAAAATTGAGCAAT+TGG | + | chr4_2:28888037-28888056 | Msa0597060:intron | 30.0% | |
| GATCGTAAATCTGACATAAA+GGG | + | chr4_2:28888402-28888421 | Msa0597060:intron | 30.0% | |
| GATGGTTATGTTACCAAAAA+TGG | - | chr4_2:28888449-28888468 | None:intergenic | 30.0% | |
| AATATGAGCAATGAAAGAGA+TGG | - | chr4_2:28888467-28888486 | None:intergenic | 30.0% | |
| TTGTATGTTATGATCATGAG+CGG | + | chr4_2:28888515-28888534 | Msa0597060:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr4_2:28888628-28888647 | Msa0597060:intron | 30.0% | |
| CAACCTTATGTTGCAAAAAA+TGG | + | chr4_2:28888937-28888956 | Msa0597060:CDS | 30.0% | |
| !!! | ACACCATTTTTTGCAACATA+AGG | - | chr4_2:28888943-28888962 | None:intergenic | 30.0% |
| ! | TGAAACATGCTGATTATCAA+TGG | + | chr4_2:28888962-28888981 | Msa0597060:CDS | 30.0% |
| CCTAATTGAACTCATTCATT+GGG | + | chr4_2:28889275-28889294 | Msa0597060:intron | 30.0% | |
| !!! | GGATGAATCTTTTTTTGTTG+CGG | + | chr4_2:28889515-28889534 | Msa0597060:intron | 30.0% |
| GAATACACAAGAAGTTTATG+AGG | + | chr4_2:28889802-28889821 | Msa0597060:intron | 30.0% | |
| GTCTTCACTTATTCATAACA+AGG | + | chr4_2:28889857-28889876 | Msa0597060:intron | 30.0% | |
| AGTTATGATGCTTCACAATA+AGG | - | chr4_2:28890113-28890132 | None:intergenic | 30.0% | |
| !! | CTTTTTGTTTGTTTAGCACT+AGG | + | chr4_2:28890135-28890154 | Msa0597060:intron | 30.0% |
| GGCTAAACATAAACAACAAA+AGG | - | chr4_2:28890210-28890229 | None:intergenic | 30.0% | |
| ! | ATGAGTATAGTGTAGTGTTT+TGG | + | chr4_2:28890450-28890469 | Msa0597060:intron | 30.0% |
| ATATCTACAAATAAGGGAGA+AGG | - | chr4_2:28890756-28890775 | None:intergenic | 30.0% | |
| GAAATAGAAAATGAGATTGG+TGG | - | chr4_2:28890788-28890807 | None:intergenic | 30.0% | |
| TAATTTCATTACTCTCATGG+TGG | + | chr4_2:28890877-28890896 | Msa0597060:intron | 30.0% | |
| TTAGGCATGAAGAATGTAAT+AGG | - | chr4_2:28891201-28891220 | None:intergenic | 30.0% | |
| GATATTAAGAAAGGGAAACA+AGG | + | chr4_2:28891474-28891493 | Msa0597060:intron | 30.0% | |
| TTAACAGTAGTTTCTTGAAG+TGG | - | chr4_2:28891552-28891571 | None:intergenic | 30.0% | |
| ATTTAATTAAGGGAGACCTA+AGG | + | chr4_2:28891649-28891668 | Msa0597060:intron | 30.0% | |
| ATCAAAGTCTGTCAAATCAA+AGG | + | chr4_2:28891679-28891698 | Msa0597060:CDS | 30.0% | |
| TCAAAGTCTGTCAAATCAAA+GGG | + | chr4_2:28891680-28891699 | Msa0597060:CDS | 30.0% | |
| !!! | GAAACTATTTTGGGATTGTA+AGG | + | chr4_2:28891923-28891942 | Msa0597060:three_prime_UTR | 30.0% |
| GTCGTATTAGTACTCAATTA+GGG | + | chr4_2:28891956-28891975 | Msa0597060:three_prime_UTR | 30.0% | |
| ! | CTGAGGAAAAGCATAGAAAA+TGG | + | chr4_2:28885180-28885199 | Msa0597060:exon | 35.0% |
| TAAAACTTACGAGACTTGGA+TGG | - | chr4_2:28885292-28885311 | None:intergenic | 35.0% | |
| ! | GGTTTAAAACTTACGAGACT+TGG | - | chr4_2:28885296-28885315 | None:intergenic | 35.0% |
| TTTCAGCCTTGGATCAAATT+AGG | + | chr4_2:28885511-28885530 | Msa0597060:intron | 35.0% | |
| TTCAGCCTTGGATCAAATTA+GGG | + | chr4_2:28885512-28885531 | Msa0597060:intron | 35.0% | |
| TGCAATAGTTAATGCTGCAA+AGG | - | chr4_2:28886015-28886034 | None:intergenic | 35.0% | |
| CAGCATTAACTATTGCAGAT+AGG | + | chr4_2:28886018-28886037 | Msa0597060:intron | 35.0% | |
| AACTTATTATCAACCTAGGG+AGG | - | chr4_2:28886117-28886136 | None:intergenic | 35.0% | |
| TGTTTCTTTACTCCGCAATT+AGG | + | chr4_2:28886289-28886308 | Msa0597060:intron | 35.0% | |
| GGAAAAAAACCCGTCAAATT+GGG | - | chr4_2:28886373-28886392 | None:intergenic | 35.0% | |
| !!! | GTTTTGATTAGGTTTGGGTA+TGG | + | chr4_2:28886393-28886412 | Msa0597060:intron | 35.0% |
| ! | TTTTCCCCGATTTCAAAACA+CGG | + | chr4_2:28886423-28886442 | Msa0597060:intron | 35.0% |
| ATTGTAATTGCAGATAGGCA+TGG | - | chr4_2:28886848-28886867 | None:intergenic | 35.0% | |
| ATTCAAACTATTATCTGGGG+TGG | - | chr4_2:28886964-28886983 | None:intergenic | 35.0% | |
| !! | ATTTAGTTTGAGGTAGCTGA+TGG | - | chr4_2:28887005-28887024 | None:intergenic | 35.0% |
| ! | ACCTGGACTTACAATTTTAG+TGG | + | chr4_2:28887151-28887170 | Msa0597060:intron | 35.0% |
| !! | CCTGGACTTACAATTTTAGT+GGG | + | chr4_2:28887152-28887171 | Msa0597060:intron | 35.0% |
| !! | CTGGACTTACAATTTTAGTG+GGG | + | chr4_2:28887153-28887172 | Msa0597060:intron | 35.0% |
| GATTAAACTTAGTCCCACAT+CGG | + | chr4_2:28887379-28887398 | Msa0597060:intron | 35.0% | |
| TAAACAAAGCTTTGCTTGGT+GGG | + | chr4_2:28887470-28887489 | Msa0597060:intron | 35.0% | |
| CAAAAATATTAAACTGGGCC+TGG | + | chr4_2:28887566-28887585 | Msa0597060:intron | 35.0% | |
| ! | TTTAAACTGCAAACCCCTTT+TGG | + | chr4_2:28887867-28887886 | Msa0597060:intron | 35.0% |
| ! | GTTATCTTGCAGTGTTGAAT+TGG | - | chr4_2:28887945-28887964 | None:intergenic | 35.0% |
| AATTGAGCAATTGGAGCATA+AGG | + | chr4_2:28888046-28888065 | Msa0597060:intron | 35.0% | |
| AAAGACAGAGGAGTTTATGT+CGG | + | chr4_2:28888311-28888330 | Msa0597060:intron | 35.0% | |
| TCAGATTTACGATCCAAACA+TGG | - | chr4_2:28888396-28888415 | None:intergenic | 35.0% | |
| GGATCGTAAATCTGACATAA+AGG | + | chr4_2:28888401-28888420 | Msa0597060:intron | 35.0% | |
| GGTTATGTTACCAAAAATGG+TGG | - | chr4_2:28888446-28888465 | None:intergenic | 35.0% | |
| TGTTTGATGAAATGCTCAAG+TGG | + | chr4_2:28888552-28888571 | Msa0597060:intron | 35.0% | |
| TGAGATGAAATCCAAACAGA+GGG | - | chr4_2:28889014-28889033 | None:intergenic | 35.0% | |
| GCCTAATTGAACTCATTCAT+TGG | + | chr4_2:28889274-28889293 | Msa0597060:intron | 35.0% | |
| CCCAATGAATGAGTTCAATT+AGG | - | chr4_2:28889278-28889297 | None:intergenic | 35.0% | |
| TTTGCCTTTCTCAGCTTAAT+AGG | + | chr4_2:28889983-28890002 | Msa0597060:intron | 35.0% | |
| GTTAGTTCGAAGTGACAAAT+CGG | - | chr4_2:28890032-28890051 | None:intergenic | 35.0% | |
| TAAGGCAATATGACGTACAT+TGG | - | chr4_2:28890095-28890114 | None:intergenic | 35.0% | |
| ATTGAAGTAGCAGTGGAAAA+AGG | - | chr4_2:28890177-28890196 | None:intergenic | 35.0% | |
| !! | TTCCACTGCTACTTCAATTT+TGG | + | chr4_2:28890179-28890198 | Msa0597060:intron | 35.0% |
| !! | TCCACTGCTACTTCAATTTT+GGG | + | chr4_2:28890180-28890199 | Msa0597060:intron | 35.0% |
| AAAGAAACCATGGCTTAACA+TGG | + | chr4_2:28890277-28890296 | Msa0597060:intron | 35.0% | |
| AAGAAAACCATGTTAAGCCA+TGG | - | chr4_2:28890287-28890306 | None:intergenic | 35.0% | |
| !!! | AGTGTAGTGTTTTGGTTGAT+TGG | + | chr4_2:28890458-28890477 | Msa0597060:intron | 35.0% |
| ! | TTGACTGATTCAAGTTCTGT+TGG | + | chr4_2:28890483-28890502 | Msa0597060:intron | 35.0% |
| CTTGAATCAGTCAACATAAC+TGG | - | chr4_2:28890531-28890550 | None:intergenic | 35.0% | |
| GATCCGTTGACAATATTTCT+TGG | + | chr4_2:28890613-28890632 | Msa0597060:intron | 35.0% | |
| CGTCCAAGAAATATTGTCAA+CGG | - | chr4_2:28890619-28890638 | None:intergenic | 35.0% | |
| ACATCAAAACATCGACACAA+CGG | - | chr4_2:28890713-28890732 | None:intergenic | 35.0% | |
| GAAATCACCACCACATAAAA+CGG | - | chr4_2:28890926-28890945 | None:intergenic | 35.0% | |
| CATGAAGAATGTAATAGGAG+TGG | - | chr4_2:28891196-28891215 | None:intergenic | 35.0% | |
| ATTCACATGTCGAAAAGAAC+AGG | + | chr4_2:28891244-28891263 | Msa0597060:intron | 35.0% | |
| AAATAGGTGTAATGTGTGCT+TGG | + | chr4_2:28891281-28891300 | Msa0597060:intron | 35.0% | |
| TGTAATGTGTGCTTGGAATA+TGG | + | chr4_2:28891288-28891307 | Msa0597060:intron | 35.0% | |
| GGGAAAAAAAGAAGTTGCTA+AGG | + | chr4_2:28891335-28891354 | Msa0597060:CDS | 35.0% | |
| ! | ACAACAACTTCAGTAGGTTT+TGG | - | chr4_2:28891522-28891541 | None:intergenic | 35.0% |
| TATGTCAAACTCCTCTTAAC+AGG | - | chr4_2:28891844-28891863 | None:intergenic | 35.0% | |
| GGTCGTATTAGTACTCAATT+AGG | + | chr4_2:28891955-28891974 | Msa0597060:three_prime_UTR | 35.0% | |
| !!! | TTAGACACCGATTTTGATTG+TGG | + | chr4_2:28892048-28892067 | Msa0597060:three_prime_UTR | 35.0% |
| TAGAAGACTCATCTTGACTG+AGG | + | chr4_2:28885163-28885182 | Msa0597060:five_prime_UTR | 40.0% | |
| ATTGTTTCAAGGACAGAGAC+TGG | - | chr4_2:28885796-28885815 | None:intergenic | 40.0% | |
| TTTGTTGCCATGCCTAATTG+CGG | - | chr4_2:28886304-28886323 | None:intergenic | 40.0% | |
| ! | TAACCACGGATATGGGTTTT+GGG | - | chr4_2:28886335-28886354 | None:intergenic | 40.0% |
| AAAACCCGTCAAATTGGGTT+TGG | - | chr4_2:28886368-28886387 | None:intergenic | 40.0% | |
| CGGAAAAAAACCCGTCAAAT+TGG | - | chr4_2:28886374-28886393 | None:intergenic | 40.0% | |
| ATTAGGTTTGGGTATGGGTA+TGG | + | chr4_2:28886399-28886418 | Msa0597060:intron | 40.0% | |
| TTTCCCCGATTTCAAAACAC+GGG | + | chr4_2:28886424-28886443 | Msa0597060:intron | 40.0% | |
| !!! | ATACCCGTGTTTTGAAATCG+GGG | - | chr4_2:28886430-28886449 | None:intergenic | 40.0% |
| !!! | CATACCCGTGTTTTGAAATC+GGG | - | chr4_2:28886431-28886450 | None:intergenic | 40.0% |
| !!! | CCATACCCGTGTTTTGAAAT+CGG | - | chr4_2:28886432-28886451 | None:intergenic | 40.0% |
| CGATTTCAAAACACGGGTAT+GGG | + | chr4_2:28886430-28886449 | Msa0597060:intron | 40.0% | |
| ! | TTTACATTTGGGACGGGTTT+GGG | - | chr4_2:28886495-28886514 | None:intergenic | 40.0% |
| !! | TTTTACATTTGGGACGGGTT+TGG | - | chr4_2:28886496-28886515 | None:intergenic | 40.0% |
| TGATTACAACGTTGCTCTTG+AGG | + | chr4_2:28886648-28886667 | Msa0597060:intron | 40.0% | |
| ATTCAATTTCTCATCCCCGT+TGG | + | chr4_2:28886765-28886784 | Msa0597060:intron | 40.0% | |
| TTCAATTTCTCATCCCCGTT+GGG | + | chr4_2:28886766-28886785 | Msa0597060:intron | 40.0% | |
| GTGTTGAATGACCTTTGAGT+AGG | + | chr4_2:28887071-28887090 | Msa0597060:intron | 40.0% | |
| ! | AAGAGAAAGGTTGTTGTTGG+AGG | - | chr4_2:28887103-28887122 | None:intergenic | 40.0% |
| CTGAAGAGAAAGGTTGTTGT+TGG | - | chr4_2:28887106-28887125 | None:intergenic | 40.0% | |
| ACAACAACCTTTCTCTTCAG+TGG | + | chr4_2:28887106-28887125 | Msa0597060:intron | 40.0% | |
| AACCTTTCTCTTCAGTGGAT+GGG | + | chr4_2:28887111-28887130 | Msa0597060:intron | 40.0% | |
| CCCACTAAAATTGTAAGTCC+AGG | - | chr4_2:28887155-28887174 | None:intergenic | 40.0% | |
| GTAAACAAAGCTTTGCTTGG+TGG | + | chr4_2:28887469-28887488 | Msa0597060:intron | 40.0% | |
| GAGTATGAGCCAAAAGCAAA+AGG | + | chr4_2:28887529-28887548 | Msa0597060:intron | 40.0% | |
| CTCAAGTCAATAGACATCGT+GGG | + | chr4_2:28887667-28887686 | Msa0597060:intron | 40.0% | |
| !!! | TTAGGGTTTTGGAGCCAAAA+GGG | - | chr4_2:28887884-28887903 | None:intergenic | 40.0% |
| ! | CAGTGTTGAATTGGTCAAAC+GGG | - | chr4_2:28887936-28887955 | None:intergenic | 40.0% |
| ! | GCAGTGTTGAATTGGTCAAA+CGG | - | chr4_2:28887937-28887956 | None:intergenic | 40.0% |
| ! | AGCCAATAGAAGCATAAGGT+CGG | + | chr4_2:28887978-28887997 | Msa0597060:intron | 40.0% |
| AACCGACCTTATGCTTCTAT+TGG | - | chr4_2:28887983-28888002 | None:intergenic | 40.0% | |
| AAGGGTGACGAGTTTGAATT+TGG | - | chr4_2:28888130-28888149 | None:intergenic | 40.0% | |
| !!! | TTTTTTTGCCAGAGAAGGAG+AGG | - | chr4_2:28888158-28888177 | None:intergenic | 40.0% |
| !!! | GCTGATTTTTTTGCCAGAGA+AGG | - | chr4_2:28888163-28888182 | None:intergenic | 40.0% |
| TGTCAAATTCGCGATTTCGA+CGG | + | chr4_2:28888197-28888216 | Msa0597060:intron | 40.0% | |
| GAATACGGTTGCGATTTCAA+CGG | + | chr4_2:28888221-28888240 | Msa0597060:intron | 40.0% | |
| GAATTTGGGGATGAGTTTGA+GGG | + | chr4_2:28888282-28888301 | Msa0597060:intron | 40.0% | |
| AATTTGGGGATGAGTTTGAG+GGG | + | chr4_2:28888283-28888302 | Msa0597060:intron | 40.0% | |
| AGTTTATGTCGGCGATGAAA+AGG | + | chr4_2:28888322-28888341 | Msa0597060:intron | 40.0% | |
| CTGACATAAAGGGAAATCGA+TGG | + | chr4_2:28888412-28888431 | Msa0597060:intron | 40.0% | |
| ! | GTTACCAAAAATGGTGGAGA+AGG | - | chr4_2:28888440-28888459 | None:intergenic | 40.0% |
| ! | AGTTTTACAAGCGTTTGTGC+AGG | + | chr4_2:28888687-28888706 | Msa0597060:intron | 40.0% |
| TCATATGGTATCTCTCCTTC+AGG | - | chr4_2:28888717-28888736 | None:intergenic | 40.0% | |
| CGATTCATTTACCCTCTGTT+TGG | + | chr4_2:28889000-28889019 | Msa0597060:intron | 40.0% | |
| CTGAGATGAAATCCAAACAG+AGG | - | chr4_2:28889015-28889034 | None:intergenic | 40.0% | |
| ATCTCAAGACTGGAAAAGCT+TGG | - | chr4_2:28889584-28889603 | None:intergenic | 40.0% | |
| ! | CTTTTCCAGTCTTGAGATCT+TGG | + | chr4_2:28889586-28889605 | Msa0597060:intron | 40.0% |
| TTAAGCCAAGATCTCAAGAC+TGG | - | chr4_2:28889594-28889613 | None:intergenic | 40.0% | |
| AGCTTAATAGGCCTGATCAA+TGG | + | chr4_2:28889995-28890014 | Msa0597060:intron | 40.0% | |
| TTAATAGGCCTGATCAATGG+TGG | + | chr4_2:28889998-28890017 | Msa0597060:intron | 40.0% | |
| TGGTTGTATCGAATTCGATG+TGG | - | chr4_2:28890075-28890094 | None:intergenic | 40.0% | |
| ACCCAAAATTGAAGTAGCAG+TGG | - | chr4_2:28890184-28890203 | None:intergenic | 40.0% | |
| TAAGGTAGCAGACACCAAAA+TGG | - | chr4_2:28890231-28890250 | None:intergenic | 40.0% | |
| TATTGTCAACGGATCTCCTT+CGG | - | chr4_2:28890608-28890627 | None:intergenic | 40.0% | |
| TTTCTTGGACGTTGAGTTAG+AGG | + | chr4_2:28890628-28890647 | Msa0597060:intron | 40.0% | |
| TTCTTGGACGTTGAGTTAGA+GGG | + | chr4_2:28890629-28890648 | Msa0597060:intron | 40.0% | |
| CAAATAAGGGAGAAGGCAAA+GGG | - | chr4_2:28890749-28890768 | None:intergenic | 40.0% | |
| ACAAATAAGGGAGAAGGCAA+AGG | - | chr4_2:28890750-28890769 | None:intergenic | 40.0% | |
| TTGATTCTCCCATCTATGCT+AGG | + | chr4_2:28890819-28890838 | Msa0597060:intron | 40.0% | |
| TCATGGTGGTTGTCTGAAAA+AGG | + | chr4_2:28890891-28890910 | Msa0597060:intron | 40.0% | |
| !! | ATTTCCTTTAGCGGATTGAG+TGG | + | chr4_2:28890941-28890960 | Msa0597060:intron | 40.0% |
| TTGAGTGGCAGTTTATGTGA+TGG | + | chr4_2:28890956-28890975 | Msa0597060:intron | 40.0% | |
| TGGAATATGGTCACAATGCT+AGG | + | chr4_2:28891301-28891320 | Msa0597060:intron | 40.0% | |
| TCACAATGCTAGGACATGTA+AGG | + | chr4_2:28891311-28891330 | Msa0597060:intron | 40.0% | |
| AATGCTAGGACATGTAAGGA+GGG | + | chr4_2:28891315-28891334 | Msa0597060:intron | 40.0% | |
| TGATTGTCAGGTGCAATTTC+TGG | - | chr4_2:28891363-28891382 | None:intergenic | 40.0% | |
| AAGAAAGGGAAACAAGGTGA+TGG | + | chr4_2:28891480-28891499 | Msa0597060:intron | 40.0% | |
| GCTTCAACAACAACTTCAGT+AGG | - | chr4_2:28891528-28891547 | None:intergenic | 40.0% | |
| GATTTGACAGACTTTGATGC+AGG | - | chr4_2:28891677-28891696 | None:intergenic | 40.0% | |
| !!! | GCATCAGCAGATCCTTTTTT+AGG | - | chr4_2:28891722-28891741 | None:intergenic | 40.0% |
| ! | ACTGATGTTGCTGTTGCTAA+CGG | + | chr4_2:28891749-28891768 | Msa0597060:CDS | 40.0% |
| ! | CTTACTTTGGTGGCAAGAGT+AGG | - | chr4_2:28885232-28885251 | None:intergenic | 45.0% |
| CTACTCTTGCCACCAAAGTA+AGG | + | chr4_2:28885230-28885249 | Msa0597060:CDS | 45.0% | |
| AACCAAACGCCTTACTTTGG+TGG | - | chr4_2:28885242-28885261 | None:intergenic | 45.0% | |
| CGAAACCAAACGCCTTACTT+TGG | - | chr4_2:28885245-28885264 | None:intergenic | 45.0% | |
| ! | AAGTAAGGCGTTTGGTTTCG+AGG | + | chr4_2:28885245-28885264 | Msa0597060:CDS | 45.0% |
| TGGCTGAGGCTTAGGTTTAT+CGG | - | chr4_2:28885272-28885291 | None:intergenic | 45.0% | |
| ! | AGAGGAGTACATACAGCAAG+AGG | + | chr4_2:28885631-28885650 | Msa0597060:intron | 45.0% |
| TTGCAGATAGGGACTTTCCA+AGG | + | chr4_2:28886030-28886049 | Msa0597060:intron | 45.0% | |
| TGCAGATAGGGACTTTCCAA+GGG | + | chr4_2:28886031-28886050 | Msa0597060:intron | 45.0% | |
| TCCAAGGGGACACAACTATT+AGG | + | chr4_2:28886046-28886065 | Msa0597060:intron | 45.0% | |
| TCCTAATAGTTGTGTCCCCT+TGG | - | chr4_2:28886050-28886069 | None:intergenic | 45.0% | |
| CTTTACTCCGCAATTAGGCA+TGG | + | chr4_2:28886294-28886313 | Msa0597060:intron | 45.0% | |
| !!! | GGATATGGGTTTTGGGGTAT+GGG | - | chr4_2:28886328-28886347 | None:intergenic | 45.0% |
| ! | AACCACGGATATGGGTTTTG+GGG | - | chr4_2:28886334-28886353 | None:intergenic | 45.0% |
| ! | GTAACCACGGATATGGGTTT+TGG | - | chr4_2:28886336-28886355 | None:intergenic | 45.0% |
| ! | CGTCAAATTGGGTTTGGTTC+GGG | - | chr4_2:28886362-28886381 | None:intergenic | 45.0% |
| ! | CCGTCAAATTGGGTTTGGTT+CGG | - | chr4_2:28886363-28886382 | None:intergenic | 45.0% |
| CCGAACCAAACCCAATTTGA+CGG | + | chr4_2:28886360-28886379 | Msa0597060:intron | 45.0% | |
| CGAACCAAACCCAATTTGAC+GGG | + | chr4_2:28886361-28886380 | Msa0597060:intron | 45.0% | |
| CCGATTTCAAAACACGGGTA+TGG | + | chr4_2:28886429-28886448 | Msa0597060:intron | 45.0% | |
| TTCAAAACACGGGTATGGGA+CGG | + | chr4_2:28886434-28886453 | Msa0597060:intron | 45.0% | |
| TTTAATGTTGGGACGGGGAT+AGG | + | chr4_2:28886706-28886725 | Msa0597060:intron | 45.0% | |
| TTGCAGATAGGCATGGCAAT+GGG | - | chr4_2:28886841-28886860 | None:intergenic | 45.0% | |
| ATTGCAGATAGGCATGGCAA+TGG | - | chr4_2:28886842-28886861 | None:intergenic | 45.0% | |
| ! | AGAAAGGTTGTTGTTGGAGG+AGG | - | chr4_2:28887100-28887119 | None:intergenic | 45.0% |
| CAACCTTTCTCTTCAGTGGA+TGG | + | chr4_2:28887110-28887129 | Msa0597060:intron | 45.0% | |
| ACCTTTCTCTTCAGTGGATG+GGG | + | chr4_2:28887112-28887131 | Msa0597060:intron | 45.0% | |
| ! | TGGACACTGCCTTTTGCTTT+TGG | - | chr4_2:28887541-28887560 | None:intergenic | 45.0% |
| ATATTAAACTGGGCCTGGAC+TGG | + | chr4_2:28887571-28887590 | Msa0597060:intron | 45.0% | |
| TGTACAAGTATACCACCCAG+GGG | - | chr4_2:28887637-28887656 | None:intergenic | 45.0% | |
| GTGTACAAGTATACCACCCA+GGG | - | chr4_2:28887638-28887657 | None:intergenic | 45.0% | |
| TGTGTACAAGTATACCACCC+AGG | - | chr4_2:28887639-28887658 | None:intergenic | 45.0% | |
| GCTCAAGTCAATAGACATCG+TGG | + | chr4_2:28887666-28887685 | Msa0597060:intron | 45.0% | |
| ! | TAGGGTTTTGCTAGGGCTTT+GGG | - | chr4_2:28887832-28887851 | None:intergenic | 45.0% |
| ! | AGATGCCTAGGGTTTTGCTA+GGG | - | chr4_2:28887839-28887858 | None:intergenic | 45.0% |
| ! | AAGATGCCTAGGGTTTTGCT+AGG | - | chr4_2:28887840-28887859 | None:intergenic | 45.0% |
| !!! | TAGGGTTTTGGAGCCAAAAG+GGG | - | chr4_2:28887883-28887902 | None:intergenic | 45.0% |
| !!! | GTTAGGGTTTTGGAGCCAAA+AGG | - | chr4_2:28887885-28887904 | None:intergenic | 45.0% |
| GGAATTTGGGGATGAGTTTG+AGG | + | chr4_2:28888281-28888300 | Msa0597060:intron | 45.0% | |
| TTATGTCGGCGATGAAAAGG+TGG | + | chr4_2:28888325-28888344 | Msa0597060:intron | 45.0% | |
| TATGTCGGCGATGAAAAGGT+GGG | + | chr4_2:28888326-28888345 | Msa0597060:intron | 45.0% | |
| ACTTTCCCTCTCACCATGTT+TGG | + | chr4_2:28888380-28888399 | Msa0597060:intron | 45.0% | |
| ACGATCCAAACATGGTGAGA+GGG | - | chr4_2:28888388-28888407 | None:intergenic | 45.0% | |
| TACGATCCAAACATGGTGAG+AGG | - | chr4_2:28888389-28888408 | None:intergenic | 45.0% | |
| ! | GGTTCCTTCTCCACCATTTT+TGG | + | chr4_2:28888433-28888452 | Msa0597060:intron | 45.0% |
| GTTTGTGCAGGTATTCCTGA+AGG | + | chr4_2:28888699-28888718 | Msa0597060:intron | 45.0% | |
| GTTTCAGGAAGCAATTGACC+AGG | + | chr4_2:28888878-28888897 | Msa0597060:CDS | 45.0% | |
| AGCAATTGACCAGGTTGTTC+AGG | + | chr4_2:28888887-28888906 | Msa0597060:CDS | 45.0% | |
| GCAATTGACCAGGTTGTTCA+GGG | + | chr4_2:28888888-28888907 | Msa0597060:CDS | 45.0% | |
| GAGTCCATGCAGCAGAATTT+CGG | + | chr4_2:28889770-28889789 | Msa0597060:intron | 45.0% | |
| CAGGCCTATTAAGCTGAGAA+AGG | - | chr4_2:28889990-28890009 | None:intergenic | 45.0% | |
| GGTAAGTGCGCAGTTTCAAA+AGG | - | chr4_2:28890054-28890073 | None:intergenic | 45.0% | |
| TCGTTATGTTGAGACGACAG+CGG | + | chr4_2:28890564-28890583 | Msa0597060:intron | 45.0% | |
| TGAGTTAGAGGGAGCAAAGA+CGG | + | chr4_2:28890640-28890659 | Msa0597060:intron | 45.0% | |
| TTCGGCAACCTAGCATAGAT+GGG | - | chr4_2:28890830-28890849 | None:intergenic | 45.0% | |
| TTTCGGCAACCTAGCATAGA+TGG | - | chr4_2:28890831-28890850 | None:intergenic | 45.0% | |
| CTATGCTAGGTTGCCGAAAA+AGG | + | chr4_2:28890832-28890851 | Msa0597060:intron | 45.0% | |
| GGTTGTCTGAAAAAGGCCAA+TGG | + | chr4_2:28890898-28890917 | Msa0597060:intron | 45.0% | |
| ACCACATAAAACGGCACCAT+TGG | - | chr4_2:28890917-28890936 | None:intergenic | 45.0% | |
| !!! | AATGGTGCCGTTTTATGTGG+TGG | + | chr4_2:28890916-28890935 | Msa0597060:intron | 45.0% |
| ! | GTGGTGGTGATTTCCTTTAG+CGG | + | chr4_2:28890932-28890951 | Msa0597060:intron | 45.0% |
| GGAAACACTCACTCTAGATC+AGG | - | chr4_2:28891004-28891023 | None:intergenic | 45.0% | |
| CAATGCTAGGACATGTAAGG+AGG | + | chr4_2:28891314-28891333 | Msa0597060:intron | 45.0% | |
| GCACCTGACAATCAGAATAG+CGG | + | chr4_2:28891369-28891388 | Msa0597060:CDS | 45.0% | |
| TGTCCGCTATTCTGATTGTC+AGG | - | chr4_2:28891375-28891394 | None:intergenic | 45.0% | |
| GACTTTGATGCAGGTTCCTT+AGG | - | chr4_2:28891668-28891687 | None:intergenic | 45.0% | |
| GTTGCAGGCACTTCAACATA+AGG | - | chr4_2:28891791-28891810 | None:intergenic | 45.0% | |
| ! | GGGATTGTAAGGCTCTTTTG+TGG | + | chr4_2:28891934-28891953 | Msa0597060:three_prime_UTR | 45.0% |
| !!! | TATTTTTAAATAATACAAAA+TGG | + | chr4_2:28885591-28885610 | Msa0597060:intron | 5.0% |
| !!! | ATTTTTAAATAATACAAAAT+GGG | + | chr4_2:28885592-28885611 | Msa0597060:intron | 5.0% |
| !! | ATTAAAAAATTATTTAATGT+TGG | + | chr4_2:28886694-28886713 | Msa0597060:intron | 5.0% |
| !! | TTAAAAAATTATTTAATGTT+GGG | + | chr4_2:28886695-28886714 | Msa0597060:intron | 5.0% |
| !! | AAAAATATTTGAATAAATTT+GGG | - | chr4_2:28888765-28888784 | None:intergenic | 5.0% |
| ! | TGCCACCAAAGTAAGGCGTT+TGG | + | chr4_2:28885237-28885256 | Msa0597060:CDS | 50.0% |
| TTACGAGACTTGGATGGCTG+AGG | - | chr4_2:28885286-28885305 | None:intergenic | 50.0% | |
| GCAGATAGGGACTTTCCAAG+GGG | + | chr4_2:28886032-28886051 | Msa0597060:intron | 50.0% | |
| AGGATGTGATACTCCTCCCT+AGG | + | chr4_2:28886101-28886120 | Msa0597060:intron | 50.0% | |
| !!! | CGGATATGGGTTTTGGGGTA+TGG | - | chr4_2:28886329-28886348 | None:intergenic | 50.0% |
| TACCCCAAAACCCATATCCG+TGG | + | chr4_2:28886329-28886348 | Msa0597060:intron | 50.0% | |
| !! | AAATTGGGTTTGGTTCGGGC+GGG | - | chr4_2:28886358-28886377 | None:intergenic | 50.0% |
| !! | CAAATTGGGTTTGGTTCGGG+CGG | - | chr4_2:28886359-28886378 | None:intergenic | 50.0% |
| TCAAAACACGGGTATGGGAC+GGG | + | chr4_2:28886435-28886454 | Msa0597060:intron | 50.0% | |
| TTTGGGTATGGATTCGGGGT+GGG | - | chr4_2:28886478-28886497 | None:intergenic | 50.0% | |
| ACGGGTTTGGGTATGGATTC+GGG | - | chr4_2:28886483-28886502 | None:intergenic | 50.0% | |
| ! | GACGGGTTTGGGTATGGATT+CGG | - | chr4_2:28886484-28886503 | None:intergenic | 50.0% |
| ! | ATTTGGGACGGGTTTGGGTA+TGG | - | chr4_2:28886490-28886509 | None:intergenic | 50.0% |
| TTTCTCATCCCCGTTGGGTA+TGG | + | chr4_2:28886771-28886790 | Msa0597060:intron | 50.0% | |
| TTCTCATCCCCGTTGGGTAT+GGG | + | chr4_2:28886772-28886791 | Msa0597060:intron | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | - | chr4_2:28886783-28886802 | None:intergenic | 50.0% | |
| GTTACCCTACCCATACCCAA+CGG | - | chr4_2:28886784-28886803 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+CGG | + | chr4_2:28886783-28886802 | Msa0597060:intron | 50.0% | |
| ! | TATGGGTAGGGTAACGGTAC+AGG | + | chr4_2:28886789-28886808 | Msa0597060:intron | 50.0% |
| ! | ATGGGTAGGGTAACGGTACA+GGG | + | chr4_2:28886790-28886809 | Msa0597060:intron | 50.0% |
| TGCAGATAGGCATGGCAATG+GGG | - | chr4_2:28886840-28886859 | None:intergenic | 50.0% | |
| CTTGTCGGACCTGCAATCTT+TGG | + | chr4_2:28887042-28887061 | Msa0597060:intron | 50.0% | |
| TCGGACCTGCAATCTTTGGA+TGG | + | chr4_2:28887046-28887065 | Msa0597060:intron | 50.0% | |
| GACCTGCAATCTTTGGATGG+TGG | + | chr4_2:28887049-28887068 | Msa0597060:intron | 50.0% | |
| CACCACCATCCAAAGATTGC+AGG | - | chr4_2:28887054-28887073 | None:intergenic | 50.0% | |
| GGAGGAGGAATCCTACTCAA+AGG | - | chr4_2:28887085-28887104 | None:intergenic | 50.0% | |
| CCTTTCTCTTCAGTGGATGG+GGG | + | chr4_2:28887113-28887132 | Msa0597060:intron | 50.0% | |
| ! | AGGGTTTTGCTAGGGCTTTG+GGG | - | chr4_2:28887831-28887850 | None:intergenic | 50.0% |
| ! | CTAGGGTTTTGCTAGGGCTT+TGG | - | chr4_2:28887833-28887852 | None:intergenic | 50.0% |
| CAAAGCCCTAGCAAAACCCT+AGG | + | chr4_2:28887831-28887850 | Msa0597060:intron | 50.0% | |
| AGAGAAGGAGAGGAGTGGAA+GGG | - | chr4_2:28888148-28888167 | None:intergenic | 50.0% | |
| CGCGATTTCGACGGTGAATA+CGG | + | chr4_2:28888206-28888225 | Msa0597060:intron | 50.0% | |
| TACGGTTGCGATTTCAACGG+CGG | + | chr4_2:28888224-28888243 | Msa0597060:intron | 50.0% | |
| ! | ACGGTTGTGGTGGAGGAATT+TGG | + | chr4_2:28888267-28888286 | Msa0597060:intron | 50.0% |
| ! | CGGTTGTGGTGGAGGAATTT+GGG | + | chr4_2:28888268-28888287 | Msa0597060:intron | 50.0% |
| ! | GGTTGTGGTGGAGGAATTTG+GGG | + | chr4_2:28888269-28888288 | Msa0597060:intron | 50.0% |
| TGAGGGGAATGCAAAGACAG+AGG | + | chr4_2:28888299-28888318 | Msa0597060:intron | 50.0% | |
| ATGTCGGCGATGAAAAGGTG+GGG | + | chr4_2:28888327-28888346 | Msa0597060:intron | 50.0% | |
| TAGACGCTCATGCGAGTTTC+AGG | + | chr4_2:28888863-28888882 | Msa0597060:intron | 50.0% | |
| CATGCCGAAATTCTGCTGCA+TGG | - | chr4_2:28889777-28889796 | None:intergenic | 50.0% | |
| CATGCAGCAGAATTTCGGCA+TGG | + | chr4_2:28889775-28889794 | Msa0597060:intron | 50.0% | |
| AGCAGAATTTCGGCATGGCA+AGG | + | chr4_2:28889780-28889799 | Msa0597060:intron | 50.0% | |
| ACTCGTCTCCACCATTGATC+AGG | - | chr4_2:28890009-28890028 | None:intergenic | 50.0% | |
| GCATAACGAAGCAGAACCGA+AGG | + | chr4_2:28890589-28890608 | Msa0597060:intron | 50.0% | |
| GTCGAGATCATGACCACCTT+CGG | - | chr4_2:28890669-28890688 | None:intergenic | 50.0% | |
| !!! | GCCAATGGTGCCGTTTTATG+TGG | + | chr4_2:28890913-28890932 | Msa0597060:intron | 50.0% |
| ACTGCCACTCAATCCGCTAA+AGG | - | chr4_2:28890948-28890967 | None:intergenic | 50.0% | |
| GCTGTAGAGTTGGCAACACA+AGG | + | chr4_2:28891399-28891418 | Msa0597060:CDS | 50.0% | |
| TCCACTTCAGTTGCAGTTGC+AGG | - | chr4_2:28891806-28891825 | None:intergenic | 50.0% | |
| GCTGATGTGCTCCTGTTAAG+AGG | + | chr4_2:28891830-28891849 | Msa0597060:CDS | 50.0% | |
| ! | GCATGCTTTTGCAACCTCCT+TGG | + | chr4_2:28892006-28892025 | Msa0597060:three_prime_UTR | 50.0% |
| TTTACAGCACCACAGCACCA+AGG | - | chr4_2:28892026-28892045 | None:intergenic | 50.0% | |
| GACTTGGATGGCTGAGGCTT+AGG | - | chr4_2:28885280-28885299 | None:intergenic | 55.0% | |
| !! | GGGACGGGTAACGGGTATAT+AGG | + | chr4_2:28886450-28886469 | Msa0597060:intron | 55.0% |
| GTTTGGGTATGGATTCGGGG+TGG | - | chr4_2:28886479-28886498 | None:intergenic | 55.0% | |
| CGGGTTTGGGTATGGATTCG+GGG | - | chr4_2:28886482-28886501 | None:intergenic | 55.0% | |
| ATGTTGGGACGGGGATAGGT+CGG | + | chr4_2:28886710-28886729 | Msa0597060:intron | 55.0% | |
| ATCCCCGTTGGGTATGGGTA+GGG | + | chr4_2:28886777-28886796 | Msa0597060:intron | 55.0% | |
| TACCCTACCCATACCCAACG+GGG | - | chr4_2:28886782-28886801 | None:intergenic | 55.0% | |
| ! | GTAGGGTAACGGTACAGGGA+AGG | + | chr4_2:28886794-28886813 | Msa0597060:intron | 55.0% |
| AGATAGGCATGGCAATGGGG+CGG | - | chr4_2:28886837-28886856 | None:intergenic | 55.0% | |
| ! | TCTGGGGTGGTGCATGCATT+AGG | - | chr4_2:28886951-28886970 | None:intergenic | 55.0% |
| CCCCCATCCACTGAAGAGAA+AGG | - | chr4_2:28887116-28887135 | None:intergenic | 55.0% | |
| TTCTCTTCAGTGGATGGGGG+TGG | + | chr4_2:28887116-28887135 | Msa0597060:intron | 55.0% | |
| AGTGGATGGGGGTGGTATCA+GGG | + | chr4_2:28887124-28887143 | Msa0597060:intron | 55.0% | |
| ! | GCTTTGCTTGGTGGGTCCAT+TGG | + | chr4_2:28887478-28887497 | Msa0597060:intron | 55.0% |
| TGGTGTGACACTTGCCACAG+TGG | + | chr4_2:28887595-28887614 | Msa0597060:intron | 55.0% | |
| GGTGTGACACTTGCCACAGT+GGG | + | chr4_2:28887596-28887615 | Msa0597060:intron | 55.0% | |
| TGCCACAGTGGGCCTAGTTA+AGG | + | chr4_2:28887607-28887626 | Msa0597060:intron | 55.0% | |
| GACCTTAACTAGGCCCACTG+TGG | - | chr4_2:28887612-28887631 | None:intergenic | 55.0% | |
| ACAAGTATACCACCCAGGGG+CGG | - | chr4_2:28887634-28887653 | None:intergenic | 55.0% | |
| CAGAGAAGGAGAGGAGTGGA+AGG | - | chr4_2:28888149-28888168 | None:intergenic | 55.0% | |
| CTTCCACTCCTCTCCTTCTC+TGG | + | chr4_2:28888147-28888166 | Msa0597060:intron | 55.0% | |
| TTGCCAGAGAAGGAGAGGAG+TGG | - | chr4_2:28888153-28888172 | None:intergenic | 55.0% | |
| GGTGAATACGGTTGTGGTGG+AGG | + | chr4_2:28888260-28888279 | Msa0597060:intron | 55.0% | |
| GGCGATGAAAAGGTGGGGAT+TGG | + | chr4_2:28888332-28888351 | Msa0597060:intron | 55.0% | |
| AAGGTGGGGATTGGATCCGA+CGG | + | chr4_2:28888341-28888360 | Msa0597060:intron | 55.0% | |
| GAGAGAGAGAGCTTCTCCGT+CGG | - | chr4_2:28888360-28888379 | None:intergenic | 55.0% | |
| GTTAGAGGGAGCAAAGACGG+TGG | + | chr4_2:28890643-28890662 | Msa0597060:intron | 55.0% | |
| CGGACAAGCTGCTGTAGAGT+TGG | + | chr4_2:28891389-28891408 | Msa0597060:CDS | 55.0% | |
| GCCTGCAACTGCAACTGAAG+TGG | + | chr4_2:28891802-28891821 | Msa0597060:CDS | 55.0% | |
| !! | TTGCAACCTCCTTGGTGCTG+TGG | + | chr4_2:28892014-28892033 | Msa0597060:three_prime_UTR | 55.0% |
| GGGCGGGTAACCACGGATAT+GGG | - | chr4_2:28886342-28886361 | None:intergenic | 60.0% | |
| !! | TTGGTTCGGGCGGGTAACCA+CGG | - | chr4_2:28886349-28886368 | None:intergenic | 60.0% |
| CACGGGTATGGGACGGGTAA+CGG | + | chr4_2:28886441-28886460 | Msa0597060:intron | 60.0% | |
| ACGGGTATGGGACGGGTAAC+GGG | + | chr4_2:28886442-28886461 | Msa0597060:intron | 60.0% | |
| TGTTGGGACGGGGATAGGTC+GGG | + | chr4_2:28886711-28886730 | Msa0597060:intron | 60.0% | |
| TCGGGAATACCCGAACCCGT+CGG | + | chr4_2:28886729-28886748 | Msa0597060:intron | 60.0% | |
| ATACCCGAACCCGTCGGAGA+CGG | + | chr4_2:28886735-28886754 | Msa0597060:intron | 60.0% | |
| AATCCCATCCCCGTCTCCGA+CGG | - | chr4_2:28886748-28886767 | None:intergenic | 60.0% | |
| CATCCCCGTTGGGTATGGGT+AGG | + | chr4_2:28886776-28886795 | Msa0597060:intron | 60.0% | |
| ATAGGCATGGCAATGGGGCG+GGG | - | chr4_2:28886835-28886854 | None:intergenic | 60.0% | |
| GATAGGCATGGCAATGGGGC+GGG | - | chr4_2:28886836-28886855 | None:intergenic | 60.0% | |
| CAGTGGATGGGGGTGGTATC+AGG | + | chr4_2:28887123-28887142 | Msa0597060:intron | 60.0% | |
| GTGGATGGGGGTGGTATCAG+GGG | + | chr4_2:28887125-28887144 | Msa0597060:intron | 60.0% | |
| !! | TAAACTGGGCCTGGACTGGC+TGG | + | chr4_2:28887575-28887594 | Msa0597060:intron | 60.0% |
| AGTGTCACACCAGCCAGTCC+AGG | - | chr4_2:28887587-28887606 | None:intergenic | 60.0% | |
| CCTAGTTAAGGTCCGCCCCT+GGG | + | chr4_2:28887619-28887638 | Msa0597060:intron | 60.0% | |
| GGTTGCGATTTCAACGGCGG+TGG | + | chr4_2:28888227-28888246 | Msa0597060:intron | 60.0% | |
| TGCGGCGGTGAATACGGTTG+TGG | + | chr4_2:28888254-28888273 | Msa0597060:intron | 60.0% | |
| GGCGGTGAATACGGTTGTGG+TGG | + | chr4_2:28888257-28888276 | Msa0597060:intron | 60.0% | |
| GAGCGCTTCCCTGAACAACC+TGG | - | chr4_2:28888899-28888918 | None:intergenic | 60.0% | |
| ACAGCACCACAGCACCAAGG+AGG | - | chr4_2:28892023-28892042 | None:intergenic | 60.0% | |
| CGGGCGGGTAACCACGGATA+TGG | - | chr4_2:28886343-28886362 | None:intergenic | 65.0% | |
| TACCCGAACCCGTCGGAGAC+GGG | + | chr4_2:28886736-28886755 | Msa0597060:intron | 65.0% | |
| ! | ATCCCCGTCTCCGACGGGTT+CGG | - | chr4_2:28886742-28886761 | None:intergenic | 65.0% |
| AACCCGTCGGAGACGGGGAT+GGG | + | chr4_2:28886742-28886761 | Msa0597060:intron | 65.0% | |
| ATCCCATCCCCGTCTCCGAC+GGG | - | chr4_2:28886747-28886766 | None:intergenic | 65.0% | |
| GATGGGGGTGGTATCAGGGG+CGG | + | chr4_2:28887128-28887147 | Msa0597060:intron | 65.0% | |
| GCCTAGTTAAGGTCCGCCCC+TGG | + | chr4_2:28887618-28887637 | Msa0597060:intron | 65.0% | |
| CCCAGGGGCGGACCTTAACT+AGG | - | chr4_2:28887622-28887641 | None:intergenic | 65.0% | |
| AGTTAAGGTCCGCCCCTGGG+TGG | + | chr4_2:28887622-28887641 | Msa0597060:intron | 65.0% | |
| TTCAACGGCGGTGGCGAGTG+CGG | + | chr4_2:28888236-28888255 | Msa0597060:intron | 65.0% | |
| GGCGAGTGCGGCGGTGAATA+CGG | + | chr4_2:28888248-28888267 | Msa0597060:intron | 65.0% | |
| GGAGCAAAGACGGTGGCCGA+AGG | + | chr4_2:28890650-28890669 | Msa0597060:intron | 65.0% | |
| GCAAAGACGGTGGCCGAAGG+TGG | + | chr4_2:28890653-28890672 | Msa0597060:intron | 65.0% | |
| ACCCGAACCCGTCGGAGACG+GGG | + | chr4_2:28886737-28886756 | Msa0597060:intron | 70.0% | |
| ! | TCCCCGTCTCCGACGGGTTC+GGG | - | chr4_2:28886741-28886760 | None:intergenic | 70.0% |
| GAACCCGTCGGAGACGGGGA+TGG | + | chr4_2:28886741-28886760 | Msa0597060:intron | 70.0% | |
| CATGGCAATGGGGCGGGGTG+GGG | - | chr4_2:28886830-28886849 | None:intergenic | 70.0% | |
| GCATGGCAATGGGGCGGGGT+GGG | - | chr4_2:28886831-28886850 | None:intergenic | 70.0% | |
| GGTGGTATCAGGGGCGGACC+TGG | + | chr4_2:28887134-28887153 | Msa0597060:intron | 70.0% | |
| CAATGGGGCGGGGTGGGGAC+GGG | - | chr4_2:28886825-28886844 | None:intergenic | 75.0% | |
| GCAATGGGGCGGGGTGGGGA+CGG | - | chr4_2:28886826-28886845 | None:intergenic | 75.0% | |
| GGCATGGCAATGGGGCGGGG+TGG | - | chr4_2:28886832-28886851 | None:intergenic | 75.0% | |
| AACGGCGGTGGCGAGTGCGG+CGG | + | chr4_2:28888239-28888258 | Msa0597060:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 28885151 | 28892094 | 28885151 | ID=Msa0597060;Name=Msa0597060 |
| chr4_2 | mRNA | 28885151 | 28892094 | 28885151 | ID=Msa0597060-mRNA-1;Parent=Msa0597060;Name=Msa0597060-mRNA-1;_AED=0.37;_eAED=0.45;_QI=48|0|0.6|0.8|1|1|5|235|188 |
| chr4_2 | exon | 28885151 | 28885301 | 28885151 | ID=Msa0597060-mRNA-1:exon:7382;Parent=Msa0597060-mRNA-1 |
| chr4_2 | exon | 28888866 | 28888983 | 28888866 | ID=Msa0597060-mRNA-1:exon:7383;Parent=Msa0597060-mRNA-1 |
| chr4_2 | exon | 28891323 | 28891448 | 28891323 | ID=Msa0597060-mRNA-1:exon:7384;Parent=Msa0597060-mRNA-1 |
| chr4_2 | exon | 28891547 | 28891566 | 28891547 | ID=Msa0597060-mRNA-1:exon:7385;Parent=Msa0597060-mRNA-1 |
| chr4_2 | exon | 28891660 | 28892094 | 28891660 | ID=Msa0597060-mRNA-1:exon:7386;Parent=Msa0597060-mRNA-1 |
| chr4_2 | five_prime_UTR | 28885151 | 28885198 | 28885151 | ID=Msa0597060-mRNA-1:five_prime_utr;Parent=Msa0597060-mRNA-1 |
| chr4_2 | CDS | 28885199 | 28885301 | 28885199 | ID=Msa0597060-mRNA-1:cds;Parent=Msa0597060-mRNA-1 |
| chr4_2 | CDS | 28888866 | 28888983 | 28888866 | ID=Msa0597060-mRNA-1:cds;Parent=Msa0597060-mRNA-1 |
| chr4_2 | CDS | 28891323 | 28891448 | 28891323 | ID=Msa0597060-mRNA-1:cds;Parent=Msa0597060-mRNA-1 |
| chr4_2 | CDS | 28891547 | 28891566 | 28891547 | ID=Msa0597060-mRNA-1:cds;Parent=Msa0597060-mRNA-1 |
| chr4_2 | CDS | 28891660 | 28891859 | 28891660 | ID=Msa0597060-mRNA-1:cds;Parent=Msa0597060-mRNA-1 |
| chr4_2 | three_prime_UTR | 28891860 | 28892094 | 28891860 | ID=Msa0597060-mRNA-1:three_prime_utr;Parent=Msa0597060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
