AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0601330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601330 MtrunA17_Chr4g0026321 96.601 353 12 0 1 353 1 353 0.0 699
Msa0601330 MtrunA17_Chr2g0321511 67.139 353 114 1 1 353 1 351 8.17e-174 489
Msa0601330 MtrunA17_Chr1g0189111 59.062 320 130 1 28 347 30 348 3.01e-140 405
Msa0601330 MtrunA17_Chr4g0043851 51.462 342 164 1 10 351 15 354 9.24e-129 375
Msa0601330 MtrunA17_Chr2g0285901 51.553 322 155 1 26 347 21 341 6.73e-123 360
Msa0601330 MtrunA17_Chr4g0003281 44.348 345 186 2 9 347 15 359 2.87e-108 323
Msa0601330 MtrunA17_Chr4g0064021 44.598 361 185 3 28 373 25 385 3.19e-108 322
Msa0601330 MtrunA17_Chr3g0119541 46.471 340 170 5 25 360 22 353 8.85e-99 298
Msa0601330 MtrunA17_Chr4g0034901 44.575 341 187 2 9 347 8 348 1.27e-97 298
Msa0601330 MtrunA17_Chr1g0177171 47.059 323 166 4 28 347 37 357 7.10e-96 295
Msa0601330 MtrunA17_Chr5g0439251 46.483 327 168 4 25 347 21 344 5.20e-95 292
Msa0601330 MtrunA17_Chr3g0144531 43.529 340 189 3 10 347 9 347 9.46e-95 290
Msa0601330 MtrunA17_Chr1g0146831 43.917 337 178 5 10 344 17 344 1.23e-94 288
Msa0601330 MtrunA17_Chr1g0155001 43.925 321 178 2 29 347 24 344 1.43e-94 289
Msa0601330 MtrunA17_Chr8g0389741 45.201 323 175 2 24 345 23 344 5.99e-94 290
Msa0601330 MtrunA17_Chr6g0487261 43.519 324 175 3 26 345 24 343 9.92e-89 276
Msa0601330 MtrunA17_Chr7g0234821 39.938 323 188 5 30 347 27 348 9.58e-84 262
Msa0601330 MtrunA17_Chr7g0223961 41.925 322 179 6 28 347 22 337 5.86e-83 260
Msa0601330 MtrunA17_Chr4g0046311 37.500 344 204 6 11 347 8 347 9.28e-78 247
Msa0601330 MtrunA17_Chr1g0161011 38.192 343 203 5 10 347 7 345 2.44e-77 247
Msa0601330 MtrunA17_Chr8g0339191 37.758 339 202 7 14 347 17 351 4.47e-77 245
Msa0601330 MtrunA17_Chr4g0043511 41.875 320 181 5 30 347 63 379 3.32e-76 245
Msa0601330 MtrunA17_Chr8g0378621 37.059 340 209 3 8 343 5 343 1.27e-74 240
Msa0601330 MtrunA17_Chr4g0039011 37.612 335 193 6 15 346 26 347 1.15e-72 231
Msa0601330 MtrunA17_Chr3g0110371 37.538 325 194 4 29 347 24 345 9.78e-72 232
Msa0601330 MtrunA17_Chr4g0075031 37.846 325 197 3 23 343 39 362 1.13e-71 233
Msa0601330 MtrunA17_Chr4g0038981 37.313 335 193 7 10 343 6 324 2.54e-71 226
Msa0601330 MtrunA17_Chr4g0038971 37.870 338 196 8 9 345 2 326 4.44e-71 225
Msa0601330 MtrunA17_Chr4g0038941 38.365 318 183 5 28 345 51 355 1.95e-69 222
Msa0601330 MtrunA17_Chr3g0121271 34.718 337 213 5 12 343 10 344 9.37e-69 224
Msa0601330 MtrunA17_Chr5g0434591 34.795 342 213 5 9 343 2 340 1.08e-68 224
Msa0601330 MtrunA17_Chr4g0039071 39.062 320 187 5 28 346 24 336 7.90e-68 219
Msa0601330 MtrunA17_Chr4g0038961 36.765 340 197 9 9 345 2 326 2.68e-67 216
Msa0601330 MtrunA17_Chr2g0294591 37.576 330 194 8 22 348 23 343 5.56e-64 208
Msa0601330 MtrunA17_Chr7g0250301 33.962 318 200 6 27 343 6 314 4.52e-63 204
Msa0601330 MtrunA17_Chr1g0174261 40.411 292 162 8 58 346 1 283 8.09e-63 204
Msa0601330 MtrunA17_Chr2g0294601 34.694 343 214 7 7 347 37 371 9.07e-62 203
Msa0601330 MtrunA17_Chr4g0039021 37.762 286 168 5 55 339 7 283 4.20e-59 193
Msa0601330 MtrunA17_Chr8g0383311 33.025 324 202 10 30 345 44 360 3.56e-54 186
Msa0601330 MtrunA17_Chr1g0148391 32.665 349 214 12 7 345 6 343 9.42e-52 179
Msa0601330 MtrunA17_Chr7g0250321 31.399 293 192 5 7 298 6 290 1.74e-48 166
Msa0601330 MtrunA17_Chr3g0138741 33.129 326 203 10 30 347 32 350 6.64e-48 169
Msa0601330 MtrunA17_Chr2g0290821 33.435 329 204 10 28 347 27 349 1.34e-47 168
Msa0601330 MtrunA17_Chr5g0436361 33.951 324 201 9 26 344 34 349 2.44e-46 162
Msa0601330 MtrunA17_Chr6g0461601 32.011 353 214 13 5 343 4 344 6.69e-46 164
Msa0601330 MtrunA17_Chr4g0069801 29.859 355 228 13 4 347 3 347 9.73e-46 163
Msa0601330 MtrunA17_Chr7g0253091 31.928 332 204 13 28 347 25 346 2.60e-44 159
Msa0601330 MtrunA17_Chr4g0062771 31.956 363 220 14 2 350 6 355 4.25e-44 159
Msa0601330 MtrunA17_Chr3g0129341 30.793 328 206 14 28 345 33 349 1.33e-42 155
Msa0601330 MtrunA17_Chr4g0076581 32.424 330 206 11 28 347 32 354 2.27e-42 154
Msa0601330 MtrunA17_Chr2g0306311 28.610 374 221 12 10 348 16 378 5.69e-40 148
Msa0601330 MtrunA17_Chr3g0105981 30.183 328 212 10 28 347 26 344 1.09e-38 143
Msa0601330 MtrunA17_Chr2g0294581 28.037 214 136 5 22 225 69 274 2.66e-19 87.0
Msa0601330 MtrunA17_Chr4g0018771 41.667 96 49 4 251 345 86 175 7.57e-15 73.2
Msa0601330 MtrunA17_Chr4g0018861 41.304 92 47 4 255 345 88 173 2.56e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601330 AT2G27500.1 64.545 330 116 1 23 351 23 352 4.92e-168 475
Msa0601330 AT2G27500.2 64.545 330 116 1 23 351 23 352 6.04e-168 474
Msa0601330 AT1G32860.1 53.803 355 160 2 1 351 1 355 3.41e-139 403
Msa0601330 AT2G27500.3 63.504 274 99 1 79 351 1 274 1.70e-137 395
Msa0601330 AT5G42100.2 53.704 324 147 2 28 348 26 349 9.43e-125 366
Msa0601330 AT5G42100.1 53.704 324 147 2 28 348 26 349 1.04e-124 366
Msa0601330 AT4G18340.1 48.424 349 175 3 3 347 5 352 4.86e-122 358
Msa0601330 AT4G18340.2 48.424 349 175 3 3 347 5 352 6.71e-122 358
Msa0601330 AT1G30080.1 48.071 337 175 0 10 346 17 353 3.03e-116 344
Msa0601330 AT1G30080.2 48.071 337 175 0 10 346 17 353 3.35e-116 343
Msa0601330 AT3G15800.1 47.493 339 176 2 28 364 42 380 4.45e-115 341
Msa0601330 AT2G26600.1 44.578 332 180 2 23 350 25 356 4.03e-109 325
Msa0601330 AT4G26830.1 46.154 338 178 3 10 345 6 341 2.21e-103 313
Msa0601330 AT4G26830.2 47.799 318 162 3 30 345 30 345 5.38e-103 312
Msa0601330 AT5G55180.2 44.478 335 177 4 15 347 19 346 2.26e-96 295
Msa0601330 AT5G55180.1 44.478 335 177 4 15 347 19 346 3.39e-96 295
Msa0601330 AT2G05790.1 46.894 322 164 4 28 345 24 342 4.20e-95 292
Msa0601330 AT2G16230.1 45.231 325 176 2 25 347 20 344 3.37e-94 291
Msa0601330 AT4G34480.2 44.248 339 187 2 11 347 7 345 1.33e-93 285
Msa0601330 AT4G34480.1 44.248 339 187 2 11 347 7 345 1.80e-91 284
Msa0601330 AT5G24318.4 42.857 322 178 3 28 347 29 346 1.95e-91 280
Msa0601330 AT5G24318.2 42.424 330 184 3 28 355 29 354 1.44e-90 280
Msa0601330 AT5G42720.1 43.023 344 185 4 6 347 12 346 1.74e-90 279
Msa0601330 AT5G24318.1 42.424 330 184 3 28 355 29 354 2.87e-90 279
Msa0601330 AT2G26600.2 46.538 260 139 0 91 350 3 262 3.07e-90 274
Msa0601330 AT5G56590.1 41.615 322 186 2 26 345 23 344 2.59e-86 271
Msa0601330 AT4G29360.1 42.899 338 190 3 10 345 7 343 2.79e-83 263
Msa0601330 AT4G29360.2 42.775 346 193 4 4 345 9 353 3.06e-83 264
Msa0601330 AT3G07320.1 40.299 335 190 6 22 347 14 347 3.26e-82 259
Msa0601330 AT2G01630.2 39.319 323 191 3 29 347 23 344 2.40e-78 246
Msa0601330 AT2G01630.3 39.319 323 191 3 29 347 23 344 6.72e-78 247
Msa0601330 AT2G01630.1 39.319 323 191 3 29 347 23 344 6.34e-77 246
Msa0601330 AT4G16260.1 38.690 336 198 4 10 345 5 332 1.19e-76 241
Msa0601330 AT2G39640.1 39.118 340 197 5 10 347 9 340 8.31e-76 244
Msa0601330 AT4G14080.1 38.415 328 194 5 30 353 43 366 7.70e-75 240
Msa0601330 AT3G23770.1 39.009 323 189 5 30 345 38 359 1.44e-73 237
Msa0601330 AT4G16260.2 39.355 310 180 4 36 345 2 303 1.38e-72 229
Msa0601330 AT3G13560.4 35.913 323 202 3 25 343 22 343 2.82e-72 234
Msa0601330 AT3G13560.1 35.913 323 202 3 25 343 22 343 2.82e-72 234
Msa0601330 AT3G13560.2 35.913 323 202 3 25 343 22 343 2.82e-72 234
Msa0601330 AT3G13560.5 35.913 323 202 3 25 343 22 343 2.82e-72 234
Msa0601330 AT3G13560.3 35.913 323 202 3 25 343 22 343 2.82e-72 234
Msa0601330 AT3G55430.1 39.385 325 183 10 28 347 28 343 9.90e-72 231
Msa0601330 AT1G11820.1 37.736 318 193 3 30 343 45 361 1.62e-70 226
Msa0601330 AT1G11820.3 37.736 318 193 3 30 343 45 361 9.51e-70 227
Msa0601330 AT3G57270.1 37.152 323 191 7 26 345 24 337 1.08e-69 223
Msa0601330 AT1G11820.2 37.736 318 193 3 30 343 45 361 2.24e-69 227
Msa0601330 AT4G34480.3 48.707 232 119 0 116 347 3 234 1.02e-66 216
Msa0601330 AT1G66250.1 35.366 328 206 4 26 349 29 354 1.06e-66 219
Msa0601330 AT3G46570.1 37.791 344 201 9 10 348 10 345 5.10e-66 214
Msa0601330 AT3G61810.1 34.259 324 197 5 29 345 55 369 1.16e-61 203
Msa0601330 AT5G24318.3 44.292 219 117 2 138 355 1 215 7.66e-59 194
Msa0601330 AT3G57260.1 32.938 337 212 7 10 345 13 336 3.86e-58 192
Msa0601330 AT3G57260.2 32.938 337 212 7 10 345 29 352 6.23e-58 192
Msa0601330 AT1G77790.1 35.423 319 195 7 30 345 31 341 6.39e-57 190
Msa0601330 AT1G77780.1 34.018 341 214 8 6 345 2 332 7.98e-57 190
Msa0601330 AT5G20340.1 36.137 321 193 9 28 345 42 353 5.58e-56 187
Msa0601330 AT5G20390.1 34.226 336 209 8 13 345 17 343 3.18e-54 182
Msa0601330 AT3G57240.1 33.968 315 193 8 30 343 36 336 7.49e-54 181
Msa0601330 AT5G20330.1 33.913 345 216 9 4 345 9 344 1.22e-52 178
Msa0601330 AT3G55780.1 35.443 316 188 9 42 349 48 355 1.66e-49 171
Msa0601330 AT1G64760.1 32.849 344 212 12 13 347 11 344 4.48e-49 172
Msa0601330 AT1G64760.2 32.849 344 212 12 13 347 11 344 4.48e-49 172
Msa0601330 AT1G33220.1 33.025 324 207 7 4 325 9 324 3.14e-48 167
Msa0601330 AT2G19440.2 33.134 335 205 12 22 347 16 340 9.23e-48 169
Msa0601330 AT2G19440.1 33.134 335 205 12 22 347 16 340 9.23e-48 169
Msa0601330 AT5G20870.1 32.698 367 216 15 1 347 1 356 2.72e-46 166
Msa0601330 AT5G18220.1 29.499 339 225 10 11 343 13 343 7.68e-45 161
Msa0601330 AT4G31140.1 29.855 345 227 10 11 347 9 346 5.07e-44 159
Msa0601330 AT5G58090.1 31.707 328 209 10 28 347 21 341 5.20e-44 159
Msa0601330 AT3G04010.1 31.214 346 217 10 9 343 13 348 1.87e-42 155
Msa0601330 AT5G58480.1 31.385 325 208 9 28 344 25 342 7.47e-41 150
Msa0601330 AT3G24330.1 32.000 350 219 12 10 348 20 361 1.10e-40 150
Msa0601330 AT5G64790.1 28.107 338 225 11 28 357 27 354 2.83e-40 149
Msa0601330 AT5G20560.1 30.240 334 219 8 10 337 11 336 1.63e-38 141
Msa0601330 AT4G17180.1 29.607 331 209 12 28 347 24 341 2.10e-36 138

Find 77 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGTTATGCAATTTATTT+TGG 0.148253 4_2:-43920345 None:intergenic
TCAAATGTTGAATTTGTTAT+AGG 0.179247 4_2:+43920233 Msa0601330:CDS
ACCCTTCTAAAGCTCAAAAT+TGG 0.203490 4_2:+43920288 Msa0601330:CDS
GTTGAATTTGTTATAGGAAT+TGG 0.226002 4_2:+43920239 Msa0601330:CDS
CACCTTGAATAACTTTCTAT+TGG 0.237106 4_2:-43921491 None:intergenic
CAAATCAATGGCCTAAGTTT+TGG 0.237417 4_2:+43920080 Msa0601330:CDS
AACAAATTCAACATTTGATT+TGG 0.238369 4_2:-43920228 None:intergenic
TTCTTTCTTCTCACCATATC+AGG 0.241529 4_2:+43919957 Msa0601330:CDS
TAGTTTAAAGATACCTCATT+AGG 0.279200 4_2:-43920647 None:intergenic
ATCTGATCTTTGATTATAAT+AGG 0.301017 4_2:-43919893 None:intergenic
GAGAATGCAAGTAGAACATT+TGG 0.330768 4_2:-43920206 None:intergenic
AATGGCGACACCGATGAAAT+TGG 0.356366 4_2:+43920827 Msa0601330:CDS
TCATCAAGAAATTCAACAAT+TGG 0.359860 4_2:-43920569 None:intergenic
ATTGGAACCAATGGATTTCC+AGG 0.366015 4_2:-43920920 None:intergenic
TTATACCAATGTTGAAGTTA+AGG 0.367370 4_2:+43920781 Msa0601330:CDS
TCATAATGTAAATTTGTGTT+TGG 0.368318 4_2:-43920704 None:intergenic
AAATATTAAGGAACCTGATA+TGG 0.368766 4_2:-43919970 None:intergenic
ATTTCAACCAAATGAAGGTT+TGG 0.371282 4_2:+43920676 Msa0601330:CDS
GGATCAACCAAACCTTCATT+TGG 0.387383 4_2:-43920683 None:intergenic
TGTAATCCAATGTTATAAAC+TGG 0.399547 4_2:-43921034 None:intergenic
CCTGCTTCAGAAAGAAACTA+TGG 0.401079 4_2:+43920989 Msa0601330:CDS
AGTTTAAAGATACCTCATTA+GGG 0.402444 4_2:-43920646 None:intergenic
TATGCTGCAATCAAAGTGAT+AGG 0.404460 4_2:+43920758 Msa0601330:CDS
CATAATTCACTTGTTAAGCT+TGG 0.409029 4_2:+43920437 Msa0601330:CDS
GATTCATTTATGCAAATCAA+TGG 0.436820 4_2:+43920068 Msa0601330:intron
CCATAGTTTCTTTCTGAAGC+AGG 0.437326 4_2:-43920989 None:intergenic
TTCCAATAGAAAGTTATTCA+AGG 0.441517 4_2:+43921489 Msa0601330:three_prime_UTR
TATAATAGGCAACAATATCT+AGG 0.443305 4_2:-43919879 None:intergenic
GAAGTTAAGGTTTCTGAGAC+AGG 0.447516 4_2:+43920794 Msa0601330:CDS
CTGTTGTAACAGTAATTACT+TGG 0.448483 4_2:-43920466 None:intergenic
AAGTGATTTGAAGAAGGAAA+AGG 0.449912 4_2:-43919931 None:intergenic
TGGAAAATAGAATAATGTAT+AGG 0.450457 4_2:-43921471 None:intergenic
AATTCTTACCCTCCTTCGTC+CGG 0.452125 4_2:+43920512 Msa0601330:CDS
GAGGAAAGACATGGAACTCC+TGG 0.456953 4_2:+43920902 Msa0601330:CDS
ATTTAAAGTCTTAGACTCTC+AGG 0.458332 4_2:+43921714 Msa0601330:three_prime_UTR
AAAATAAATTGCATAACTGT+TGG 0.468767 4_2:+43920347 Msa0601330:CDS
CAAATCTGACCTAAAAGAAC+CGG 0.469027 4_2:-43920531 None:intergenic
GAGACAGGTTGGCCTTCAAA+TGG 0.474442 4_2:+43920809 Msa0601330:CDS
TGTGAATGCTGAATCTATAG+TGG 0.475035 4_2:+43921641 Msa0601330:three_prime_UTR
GCATTATTTCAACCAAATGA+AGG 0.475383 4_2:+43920671 Msa0601330:CDS
CATAGTTTATTCCAAAACTT+AGG 0.484241 4_2:-43920091 None:intergenic
GGTAGACCAGTTTATAACAT+TGG 0.488178 4_2:+43921028 Msa0601330:CDS
GAAAAGAAGTGATTTGAAGA+AGG 0.488719 4_2:-43919937 None:intergenic
TTTCTTTCTGAAGCAGGACC+AGG 0.491860 4_2:-43920983 None:intergenic
AAATTTGCTTAGAAGAATTG+AGG 0.496626 4_2:+43920883 Msa0601330:CDS
TTATAAACTGGTCTACCATC+AGG 0.497918 4_2:-43921022 None:intergenic
TCTTGAATGAGATGGTAGAT+TGG 0.499562 4_2:-43920126 None:intergenic
GGAGGGCTCAAAGGAAGTAT+AGG 0.500223 4_2:+43921444 Msa0601330:CDS
TCATCGGTGTCGCCATTTGA+AGG 0.506564 4_2:-43920821 None:intergenic
TATACATCAATTGGAACCAA+TGG 0.507282 4_2:-43920929 None:intergenic
GTTTATAACATTGGATTACA+AGG 0.510666 4_2:+43921037 Msa0601330:CDS
AGAGTGAGGTGATGCAAAGT+TGG 0.517909 4_2:-43919851 None:intergenic
TGGTGTAGCACCAATTTCAT+CGG 0.522068 4_2:-43920837 None:intergenic
AGAAACCTTAACTTCAACAT+TGG 0.523456 4_2:-43920786 None:intergenic
AATGACTATATATATGAGCT+TGG 0.524066 4_2:+43921670 Msa0601330:three_prime_UTR
AAGGTGAGGGAATATTCAAA+TGG 0.528346 4_2:+43921508 Msa0601330:three_prime_UTR
CAGTACAAGGGAGGGCTCAA+AGG 0.544450 4_2:+43921435 Msa0601330:CDS
TATGGACTTTATTATCCTGA+TGG 0.553442 4_2:+43921007 Msa0601330:CDS
ATCATGATCAGTACAAGGGA+GGG 0.554297 4_2:+43921427 Msa0601330:CDS
TTTAATGAAGATTTGAAACC+TGG 0.554891 4_2:+43920965 Msa0601330:CDS
TGGAACTCCTGGAAATCCAT+TGG 0.557029 4_2:+43920913 Msa0601330:CDS
TTAAGGTTTCTGAGACAGGT+TGG 0.560373 4_2:+43920798 Msa0601330:CDS
TAAAAGAACCGGACGAAGGA+GGG 0.563985 4_2:-43920520 None:intergenic
TAGAAAGTTATTCAAGGTGA+GGG 0.577665 4_2:+43921495 Msa0601330:three_prime_UTR
TTAGAATCATGATCAGTACA+AGG 0.578763 4_2:+43921422 Msa0601330:CDS
ATAGAAAGTTATTCAAGGTG+AGG 0.582915 4_2:+43921494 Msa0601330:three_prime_UTR
ACAGCTACTCTTGAATGAGA+TGG 0.605234 4_2:-43920134 None:intergenic
CTAAAAGAACCGGACGAAGG+AGG 0.620046 4_2:-43920521 None:intergenic
ATATAAAGATAACCCTAATG+AGG 0.620782 4_2:+43920634 Msa0601330:CDS
AGAAGAATTGAGGAAAGACA+TGG 0.624353 4_2:+43920893 Msa0601330:CDS
CAAAATGCAAAATTGTACAA+TGG 0.632067 4_2:+43920860 Msa0601330:CDS
ATATCTAGGCACAGAGAGTG+AGG 0.635298 4_2:-43919865 None:intergenic
AATCATGATCAGTACAAGGG+AGG 0.644884 4_2:+43921426 Msa0601330:CDS
TAGAATCATGATCAGTACAA+GGG 0.645176 4_2:+43921423 Msa0601330:CDS
GACCTAAAAGAACCGGACGA+AGG 0.662778 4_2:-43920524 None:intergenic
CAGCATTCACATGATCCATG+TGG 0.705785 4_2:-43921629 None:intergenic
GTATTTCTGAGAATACCACA+TGG 0.752552 4_2:+43921614 Msa0601330:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTTTTTATTTATGCT+TGG + chr4_2:43921258-43921277 Msa0601330:intron 10.0%
!!! TTTAAAACTATTACATAAAT+TGG - chr4_2:43921303-43921322 None:intergenic 10.0%
!!! TATTATTTTTTATTTATGCT+TGG + chr4_2:43921258-43921277 Msa0601330:intron 10.0%
!!! TTTAAAACTATTACATAAAT+TGG - chr4_2:43921303-43921322 None:intergenic 10.0%
!! TATCTTTATATGCAAAAAAA+GGG - chr4_2:43920625-43920644 None:intergenic 15.0%
!! TTATCTTTATATGCAAAAAA+AGG - chr4_2:43920626-43920645 None:intergenic 15.0%
!! ACATAAAAATTAATCTCAAA+AGG - chr4_2:43921119-43921138 None:intergenic 15.0%
!! AAATTACAAAAACAATATTC+AGG - chr4_2:43921536-43921555 None:intergenic 15.0%
!! TATCTTTATATGCAAAAAAA+GGG - chr4_2:43920625-43920644 None:intergenic 15.0%
!! TTATCTTTATATGCAAAAAA+AGG - chr4_2:43920626-43920645 None:intergenic 15.0%
!! ACATAAAAATTAATCTCAAA+AGG - chr4_2:43921119-43921138 None:intergenic 15.0%
!! AAATTACAAAAACAATATTC+AGG - chr4_2:43921536-43921555 None:intergenic 15.0%
!! ATCTGATCTTTGATTATAAT+AGG - chr4_2:43919896-43919915 None:intergenic 20.0%
!! TAGAGAGAAGATAAATATTA+AGG - chr4_2:43919985-43920004 None:intergenic 20.0%
!! AACAAATTCAACATTTGATT+TGG - chr4_2:43920231-43920250 None:intergenic 20.0%
!!! TCAAATGTTGAATTTGTTAT+AGG + chr4_2:43920233-43920252 Msa0601330:CDS 20.0%
!!! AATTTATTTTGGTTTGTGAA+AGG - chr4_2:43920337-43920356 None:intergenic 20.0%
!!! AACAGTTATGCAATTTATTT+TGG - chr4_2:43920348-43920367 None:intergenic 20.0%
!! AAAATAAATTGCATAACTGT+TGG + chr4_2:43920347-43920366 Msa0601330:CDS 20.0%
!! TCATAATGTAAATTTGTGTT+TGG - chr4_2:43920707-43920726 None:intergenic 20.0%
!!! AATTTTGCTTACATTAGATT+TGG - chr4_2:43921089-43921108 None:intergenic 20.0%
!! TGGAAAATAGAATAATGTAT+AGG - chr4_2:43921474-43921493 None:intergenic 20.0%
!!! TAATTTCCTTGCAATTTTTT+GGG + chr4_2:43921550-43921569 Msa0601330:three_prime_UTR 20.0%
!! ATCTGATCTTTGATTATAAT+AGG - chr4_2:43919896-43919915 None:intergenic 20.0%
!! TAGAGAGAAGATAAATATTA+AGG - chr4_2:43919985-43920004 None:intergenic 20.0%
!! AACAAATTCAACATTTGATT+TGG - chr4_2:43920231-43920250 None:intergenic 20.0%
!!! TCAAATGTTGAATTTGTTAT+AGG + chr4_2:43920233-43920252 Msa0601330:CDS 20.0%
!!! AATTTATTTTGGTTTGTGAA+AGG - chr4_2:43920337-43920356 None:intergenic 20.0%
!!! AACAGTTATGCAATTTATTT+TGG - chr4_2:43920348-43920367 None:intergenic 20.0%
!! AAAATAAATTGCATAACTGT+TGG + chr4_2:43920347-43920366 Msa0601330:CDS 20.0%
!! TCATAATGTAAATTTGTGTT+TGG - chr4_2:43920707-43920726 None:intergenic 20.0%
!!! AATTTTGCTTACATTAGATT+TGG - chr4_2:43921089-43921108 None:intergenic 20.0%
!! TGGAAAATAGAATAATGTAT+AGG - chr4_2:43921474-43921493 None:intergenic 20.0%
!!! TAATTTCCTTGCAATTTTTT+GGG + chr4_2:43921550-43921569 Msa0601330:three_prime_UTR 20.0%
! TATAATAGGCAACAATATCT+AGG - chr4_2:43919882-43919901 None:intergenic 25.0%
! AAATATTAAGGAACCTGATA+TGG - chr4_2:43919973-43919992 None:intergenic 25.0%
! GATTCATTTATGCAAATCAA+TGG + chr4_2:43920068-43920087 Msa0601330:intron 25.0%
! CATAGTTTATTCCAAAACTT+AGG - chr4_2:43920094-43920113 None:intergenic 25.0%
!!! CTAAGTTTTGGAATAAACTA+TGG + chr4_2:43920092-43920111 Msa0601330:CDS 25.0%
!!! GTTGAATTTGTTATAGGAAT+TGG + chr4_2:43920239-43920258 Msa0601330:CDS 25.0%
!! TTATGAACATTTTGCATTGA+AGG - chr4_2:43920422-43920441 None:intergenic 25.0%
!! AGCTCATTCTTTTAACATTT+TGG + chr4_2:43920487-43920506 Msa0601330:CDS 25.0%
! TCATCAAGAAATTCAACAAT+TGG - chr4_2:43920572-43920591 None:intergenic 25.0%
! ATATAAAGATAACCCTAATG+AGG + chr4_2:43920634-43920653 Msa0601330:CDS 25.0%
! AGTTTAAAGATACCTCATTA+GGG - chr4_2:43920649-43920668 None:intergenic 25.0%
! TAGTTTAAAGATACCTCATT+AGG - chr4_2:43920650-43920669 None:intergenic 25.0%
! TTATACCAATGTTGAAGTTA+AGG + chr4_2:43920781-43920800 Msa0601330:CDS 25.0%
!! TTGTACAATTTTGCATTTTG+TGG - chr4_2:43920860-43920879 None:intergenic 25.0%
! CAAAATGCAAAATTGTACAA+TGG + chr4_2:43920860-43920879 Msa0601330:CDS 25.0%
!! AAATTTGCTTAGAAGAATTG+AGG + chr4_2:43920883-43920902 Msa0601330:CDS 25.0%
! GCAAAAACATATACATCAAT+TGG - chr4_2:43920941-43920960 None:intergenic 25.0%
!! TTTAATGAAGATTTGAAACC+TGG + chr4_2:43920965-43920984 Msa0601330:CDS 25.0%
! TGTAATCCAATGTTATAAAC+TGG - chr4_2:43921037-43921056 None:intergenic 25.0%
! GTTTATAACATTGGATTACA+AGG + chr4_2:43921037-43921056 Msa0601330:CDS 25.0%
!! GATTAATTTTTATGTACCGA+CGG + chr4_2:43921124-43921143 Msa0601330:intron 25.0%
! TTCCAATAGAAAGTTATTCA+AGG + chr4_2:43921489-43921508 Msa0601330:three_prime_UTR 25.0%
!!! GTAATTTCCTTGCAATTTTT+TGG + chr4_2:43921549-43921568 Msa0601330:three_prime_UTR 25.0%
! AATGACTATATATATGAGCT+TGG + chr4_2:43921670-43921689 Msa0601330:three_prime_UTR 25.0%
! TATAATAGGCAACAATATCT+AGG - chr4_2:43919882-43919901 None:intergenic 25.0%
! AAATATTAAGGAACCTGATA+TGG - chr4_2:43919973-43919992 None:intergenic 25.0%
! GATTCATTTATGCAAATCAA+TGG + chr4_2:43920068-43920087 Msa0601330:intron 25.0%
! CATAGTTTATTCCAAAACTT+AGG - chr4_2:43920094-43920113 None:intergenic 25.0%
!!! CTAAGTTTTGGAATAAACTA+TGG + chr4_2:43920092-43920111 Msa0601330:CDS 25.0%
!!! GTTGAATTTGTTATAGGAAT+TGG + chr4_2:43920239-43920258 Msa0601330:CDS 25.0%
!! TTATGAACATTTTGCATTGA+AGG - chr4_2:43920422-43920441 None:intergenic 25.0%
!! AGCTCATTCTTTTAACATTT+TGG + chr4_2:43920487-43920506 Msa0601330:CDS 25.0%
! TCATCAAGAAATTCAACAAT+TGG - chr4_2:43920572-43920591 None:intergenic 25.0%
! ATATAAAGATAACCCTAATG+AGG + chr4_2:43920634-43920653 Msa0601330:CDS 25.0%
! AGTTTAAAGATACCTCATTA+GGG - chr4_2:43920649-43920668 None:intergenic 25.0%
! TAGTTTAAAGATACCTCATT+AGG - chr4_2:43920650-43920669 None:intergenic 25.0%
! TTATACCAATGTTGAAGTTA+AGG + chr4_2:43920781-43920800 Msa0601330:CDS 25.0%
!! TTGTACAATTTTGCATTTTG+TGG - chr4_2:43920860-43920879 None:intergenic 25.0%
! CAAAATGCAAAATTGTACAA+TGG + chr4_2:43920860-43920879 Msa0601330:CDS 25.0%
!! AAATTTGCTTAGAAGAATTG+AGG + chr4_2:43920883-43920902 Msa0601330:CDS 25.0%
! GCAAAAACATATACATCAAT+TGG - chr4_2:43920941-43920960 None:intergenic 25.0%
!! TTTAATGAAGATTTGAAACC+TGG + chr4_2:43920965-43920984 Msa0601330:CDS 25.0%
! TGTAATCCAATGTTATAAAC+TGG - chr4_2:43921037-43921056 None:intergenic 25.0%
! GTTTATAACATTGGATTACA+AGG + chr4_2:43921037-43921056 Msa0601330:CDS 25.0%
!! GATTAATTTTTATGTACCGA+CGG + chr4_2:43921124-43921143 Msa0601330:intron 25.0%
! TTCCAATAGAAAGTTATTCA+AGG + chr4_2:43921489-43921508 Msa0601330:three_prime_UTR 25.0%
!!! GTAATTTCCTTGCAATTTTT+TGG + chr4_2:43921549-43921568 Msa0601330:three_prime_UTR 25.0%
! AATGACTATATATATGAGCT+TGG + chr4_2:43921670-43921689 Msa0601330:three_prime_UTR 25.0%
AAGTGATTTGAAGAAGGAAA+AGG - chr4_2:43919934-43919953 None:intergenic 30.0%
GAAAAGAAGTGATTTGAAGA+AGG - chr4_2:43919940-43919959 None:intergenic 30.0%
!!! TCCAATTTTGAGCTTTAGAA+GGG - chr4_2:43920292-43920311 None:intergenic 30.0%
!!! ATCCAATTTTGAGCTTTAGA+AGG - chr4_2:43920293-43920312 None:intergenic 30.0%
!!! ATTTTGGTTTGTGAAAGGTA+AGG - chr4_2:43920332-43920351 None:intergenic 30.0%
! CATAATTCACTTGTTAAGCT+TGG + chr4_2:43920437-43920456 Msa0601330:CDS 30.0%
CTGTTGTAACAGTAATTACT+TGG - chr4_2:43920469-43920488 None:intergenic 30.0%
GCATTATTTCAACCAAATGA+AGG + chr4_2:43920671-43920690 Msa0601330:CDS 30.0%
ATTTCAACCAAATGAAGGTT+TGG + chr4_2:43920676-43920695 Msa0601330:CDS 30.0%
AGAAACCTTAACTTCAACAT+TGG - chr4_2:43920789-43920808 None:intergenic 30.0%
TATACATCAATTGGAACCAA+TGG - chr4_2:43920932-43920951 None:intergenic 30.0%
TATGGACTTTATTATCCTGA+TGG + chr4_2:43921007-43921026 Msa0601330:CDS 30.0%
TTGCTTACATTAGATTTGGA+TGG - chr4_2:43921085-43921104 None:intergenic 30.0%
ATGCTTGGCTATTAGATTAT+AGG + chr4_2:43921273-43921292 Msa0601330:intron 30.0%
TTAGAATCATGATCAGTACA+AGG + chr4_2:43921422-43921441 Msa0601330:CDS 30.0%
TAGAATCATGATCAGTACAA+GGG + chr4_2:43921423-43921442 Msa0601330:CDS 30.0%
CACCTTGAATAACTTTCTAT+TGG - chr4_2:43921494-43921513 None:intergenic 30.0%
ATAGAAAGTTATTCAAGGTG+AGG + chr4_2:43921494-43921513 Msa0601330:three_prime_UTR 30.0%
TAGAAAGTTATTCAAGGTGA+GGG + chr4_2:43921495-43921514 Msa0601330:three_prime_UTR 30.0%
AAGTGATTTGAAGAAGGAAA+AGG - chr4_2:43919934-43919953 None:intergenic 30.0%
GAAAAGAAGTGATTTGAAGA+AGG - chr4_2:43919940-43919959 None:intergenic 30.0%
!!! TCCAATTTTGAGCTTTAGAA+GGG - chr4_2:43920292-43920311 None:intergenic 30.0%
!!! ATCCAATTTTGAGCTTTAGA+AGG - chr4_2:43920293-43920312 None:intergenic 30.0%
!!! ATTTTGGTTTGTGAAAGGTA+AGG - chr4_2:43920332-43920351 None:intergenic 30.0%
! CATAATTCACTTGTTAAGCT+TGG + chr4_2:43920437-43920456 Msa0601330:CDS 30.0%
CTGTTGTAACAGTAATTACT+TGG - chr4_2:43920469-43920488 None:intergenic 30.0%
GCATTATTTCAACCAAATGA+AGG + chr4_2:43920671-43920690 Msa0601330:CDS 30.0%
ATTTCAACCAAATGAAGGTT+TGG + chr4_2:43920676-43920695 Msa0601330:CDS 30.0%
AGAAACCTTAACTTCAACAT+TGG - chr4_2:43920789-43920808 None:intergenic 30.0%
TATACATCAATTGGAACCAA+TGG - chr4_2:43920932-43920951 None:intergenic 30.0%
TATGGACTTTATTATCCTGA+TGG + chr4_2:43921007-43921026 Msa0601330:CDS 30.0%
TTGCTTACATTAGATTTGGA+TGG - chr4_2:43921085-43921104 None:intergenic 30.0%
ATGCTTGGCTATTAGATTAT+AGG + chr4_2:43921273-43921292 Msa0601330:intron 30.0%
TTAGAATCATGATCAGTACA+AGG + chr4_2:43921422-43921441 Msa0601330:CDS 30.0%
TAGAATCATGATCAGTACAA+GGG + chr4_2:43921423-43921442 Msa0601330:CDS 30.0%
CACCTTGAATAACTTTCTAT+TGG - chr4_2:43921494-43921513 None:intergenic 30.0%
ATAGAAAGTTATTCAAGGTG+AGG + chr4_2:43921494-43921513 Msa0601330:three_prime_UTR 30.0%
TAGAAAGTTATTCAAGGTGA+GGG + chr4_2:43921495-43921514 Msa0601330:three_prime_UTR 30.0%
TTCTTTCTTCTCACCATATC+AGG + chr4_2:43919957-43919976 Msa0601330:CDS 35.0%
! CAAATCAATGGCCTAAGTTT+TGG + chr4_2:43920080-43920099 Msa0601330:CDS 35.0%
TCTTGAATGAGATGGTAGAT+TGG - chr4_2:43920129-43920148 None:intergenic 35.0%
GAGAATGCAAGTAGAACATT+TGG - chr4_2:43920209-43920228 None:intergenic 35.0%
!! ACCCTTCTAAAGCTCAAAAT+TGG + chr4_2:43920288-43920307 Msa0601330:CDS 35.0%
CAAATCTGACCTAAAAGAAC+CGG - chr4_2:43920534-43920553 None:intergenic 35.0%
TATGCTGCAATCAAAGTGAT+AGG + chr4_2:43920758-43920777 Msa0601330:CDS 35.0%
AGAAGAATTGAGGAAAGACA+TGG + chr4_2:43920893-43920912 Msa0601330:CDS 35.0%
! TTATAAACTGGTCTACCATC+AGG - chr4_2:43921025-43921044 None:intergenic 35.0%
GGTAGACCAGTTTATAACAT+TGG + chr4_2:43921028-43921047 Msa0601330:CDS 35.0%
ACAAGGTTATCTACCACAAA+TGG + chr4_2:43921054-43921073 Msa0601330:intron 35.0%
AAGGTGAGGGAATATTCAAA+TGG + chr4_2:43921508-43921527 Msa0601330:three_prime_UTR 35.0%
! GTATTTCTGAGAATACCACA+TGG + chr4_2:43921614-43921633 Msa0601330:three_prime_UTR 35.0%
TGTGAATGCTGAATCTATAG+TGG + chr4_2:43921641-43921660 Msa0601330:three_prime_UTR 35.0%
TTCTTTCTTCTCACCATATC+AGG + chr4_2:43919957-43919976 Msa0601330:CDS 35.0%
! CAAATCAATGGCCTAAGTTT+TGG + chr4_2:43920080-43920099 Msa0601330:CDS 35.0%
TCTTGAATGAGATGGTAGAT+TGG - chr4_2:43920129-43920148 None:intergenic 35.0%
GAGAATGCAAGTAGAACATT+TGG - chr4_2:43920209-43920228 None:intergenic 35.0%
!! ACCCTTCTAAAGCTCAAAAT+TGG + chr4_2:43920288-43920307 Msa0601330:CDS 35.0%
CAAATCTGACCTAAAAGAAC+CGG - chr4_2:43920534-43920553 None:intergenic 35.0%
TATGCTGCAATCAAAGTGAT+AGG + chr4_2:43920758-43920777 Msa0601330:CDS 35.0%
AGAAGAATTGAGGAAAGACA+TGG + chr4_2:43920893-43920912 Msa0601330:CDS 35.0%
! TTATAAACTGGTCTACCATC+AGG - chr4_2:43921025-43921044 None:intergenic 35.0%
GGTAGACCAGTTTATAACAT+TGG + chr4_2:43921028-43921047 Msa0601330:CDS 35.0%
ACAAGGTTATCTACCACAAA+TGG + chr4_2:43921054-43921073 Msa0601330:intron 35.0%
AAGGTGAGGGAATATTCAAA+TGG + chr4_2:43921508-43921527 Msa0601330:three_prime_UTR 35.0%
! GTATTTCTGAGAATACCACA+TGG + chr4_2:43921614-43921633 Msa0601330:three_prime_UTR 35.0%
TGTGAATGCTGAATCTATAG+TGG + chr4_2:43921641-43921660 Msa0601330:three_prime_UTR 35.0%
ACAGCTACTCTTGAATGAGA+TGG - chr4_2:43920137-43920156 None:intergenic 40.0%
GGATCAACCAAACCTTCATT+TGG - chr4_2:43920686-43920705 None:intergenic 40.0%
!! GAAGTTAAGGTTTCTGAGAC+AGG + chr4_2:43920794-43920813 Msa0601330:CDS 40.0%
!! TTAAGGTTTCTGAGACAGGT+TGG + chr4_2:43920798-43920817 Msa0601330:CDS 40.0%
TGGTGTAGCACCAATTTCAT+CGG - chr4_2:43920840-43920859 None:intergenic 40.0%
! ATTGGAACCAATGGATTTCC+AGG - chr4_2:43920923-43920942 None:intergenic 40.0%
!! CCATAGTTTCTTTCTGAAGC+AGG - chr4_2:43920992-43921011 None:intergenic 40.0%
CCTGCTTCAGAAAGAAACTA+TGG + chr4_2:43920989-43921008 Msa0601330:CDS 40.0%
TTAAAAAACGTGCACACCGT+CGG - chr4_2:43921143-43921162 None:intergenic 40.0%
ACCTGCATCAAATCACATCT+CGG - chr4_2:43921206-43921225 None:intergenic 40.0%
AATCATGATCAGTACAAGGG+AGG + chr4_2:43921426-43921445 Msa0601330:CDS 40.0%
ATCATGATCAGTACAAGGGA+GGG + chr4_2:43921427-43921446 Msa0601330:CDS 40.0%
!!! TCCTTGCAATTTTTTGGGCA+AGG + chr4_2:43921555-43921574 Msa0601330:three_prime_UTR 40.0%
ACCTTGCCCAAAAAATTGCA+AGG - chr4_2:43921559-43921578 None:intergenic 40.0%
ACAGCTACTCTTGAATGAGA+TGG - chr4_2:43920137-43920156 None:intergenic 40.0%
GGATCAACCAAACCTTCATT+TGG - chr4_2:43920686-43920705 None:intergenic 40.0%
!! GAAGTTAAGGTTTCTGAGAC+AGG + chr4_2:43920794-43920813 Msa0601330:CDS 40.0%
!! TTAAGGTTTCTGAGACAGGT+TGG + chr4_2:43920798-43920817 Msa0601330:CDS 40.0%
TGGTGTAGCACCAATTTCAT+CGG - chr4_2:43920840-43920859 None:intergenic 40.0%
! ATTGGAACCAATGGATTTCC+AGG - chr4_2:43920923-43920942 None:intergenic 40.0%
!! CCATAGTTTCTTTCTGAAGC+AGG - chr4_2:43920992-43921011 None:intergenic 40.0%
CCTGCTTCAGAAAGAAACTA+TGG + chr4_2:43920989-43921008 Msa0601330:CDS 40.0%
TTAAAAAACGTGCACACCGT+CGG - chr4_2:43921143-43921162 None:intergenic 40.0%
ACCTGCATCAAATCACATCT+CGG - chr4_2:43921206-43921225 None:intergenic 40.0%
AATCATGATCAGTACAAGGG+AGG + chr4_2:43921426-43921445 Msa0601330:CDS 40.0%
ATCATGATCAGTACAAGGGA+GGG + chr4_2:43921427-43921446 Msa0601330:CDS 40.0%
!!! TCCTTGCAATTTTTTGGGCA+AGG + chr4_2:43921555-43921574 Msa0601330:three_prime_UTR 40.0%
ACCTTGCCCAAAAAATTGCA+AGG - chr4_2:43921559-43921578 None:intergenic 40.0%
AGAGTGAGGTGATGCAAAGT+TGG - chr4_2:43919854-43919873 None:intergenic 45.0%
ATATCTAGGCACAGAGAGTG+AGG - chr4_2:43919868-43919887 None:intergenic 45.0%
AATTCTTACCCTCCTTCGTC+CGG + chr4_2:43920512-43920531 Msa0601330:CDS 45.0%
TAAAAGAACCGGACGAAGGA+GGG - chr4_2:43920523-43920542 None:intergenic 45.0%
AATGGCGACACCGATGAAAT+TGG + chr4_2:43920827-43920846 Msa0601330:CDS 45.0%
TGGAACTCCTGGAAATCCAT+TGG + chr4_2:43920913-43920932 Msa0601330:CDS 45.0%
!! TTTCTTTCTGAAGCAGGACC+AGG - chr4_2:43920986-43921005 None:intergenic 45.0%
TTGGATGGCACAACCATTTG+TGG - chr4_2:43921070-43921089 None:intergenic 45.0%
TCCGAGATGTGATTTGATGC+AGG + chr4_2:43921202-43921221 Msa0601330:intron 45.0%
CAGCATTCACATGATCCATG+TGG - chr4_2:43921632-43921651 None:intergenic 45.0%
AGAGTGAGGTGATGCAAAGT+TGG - chr4_2:43919854-43919873 None:intergenic 45.0%
ATATCTAGGCACAGAGAGTG+AGG - chr4_2:43919868-43919887 None:intergenic 45.0%
AATTCTTACCCTCCTTCGTC+CGG + chr4_2:43920512-43920531 Msa0601330:CDS 45.0%
TAAAAGAACCGGACGAAGGA+GGG - chr4_2:43920523-43920542 None:intergenic 45.0%
AATGGCGACACCGATGAAAT+TGG + chr4_2:43920827-43920846 Msa0601330:CDS 45.0%
TGGAACTCCTGGAAATCCAT+TGG + chr4_2:43920913-43920932 Msa0601330:CDS 45.0%
!! TTTCTTTCTGAAGCAGGACC+AGG - chr4_2:43920986-43921005 None:intergenic 45.0%
TTGGATGGCACAACCATTTG+TGG - chr4_2:43921070-43921089 None:intergenic 45.0%
TCCGAGATGTGATTTGATGC+AGG + chr4_2:43921202-43921221 Msa0601330:intron 45.0%
CAGCATTCACATGATCCATG+TGG - chr4_2:43921632-43921651 None:intergenic 45.0%
CTAAAAGAACCGGACGAAGG+AGG - chr4_2:43920524-43920543 None:intergenic 50.0%
! CTCCTTCGTCCGGTTCTTTT+AGG + chr4_2:43920522-43920541 Msa0601330:CDS 50.0%
GACCTAAAAGAACCGGACGA+AGG - chr4_2:43920527-43920546 None:intergenic 50.0%
!! GAGACAGGTTGGCCTTCAAA+TGG + chr4_2:43920809-43920828 Msa0601330:CDS 50.0%
!! TCATCGGTGTCGCCATTTGA+AGG - chr4_2:43920824-43920843 None:intergenic 50.0%
GAGGAAAGACATGGAACTCC+TGG + chr4_2:43920902-43920921 Msa0601330:CDS 50.0%
! GGAGGGCTCAAAGGAAGTAT+AGG + chr4_2:43921444-43921463 Msa0601330:CDS 50.0%
CTAAAAGAACCGGACGAAGG+AGG - chr4_2:43920524-43920543 None:intergenic 50.0%
! CTCCTTCGTCCGGTTCTTTT+AGG + chr4_2:43920522-43920541 Msa0601330:CDS 50.0%
GACCTAAAAGAACCGGACGA+AGG - chr4_2:43920527-43920546 None:intergenic 50.0%
!! GAGACAGGTTGGCCTTCAAA+TGG + chr4_2:43920809-43920828 Msa0601330:CDS 50.0%
!! TCATCGGTGTCGCCATTTGA+AGG - chr4_2:43920824-43920843 None:intergenic 50.0%
GAGGAAAGACATGGAACTCC+TGG + chr4_2:43920902-43920921 Msa0601330:CDS 50.0%
! GGAGGGCTCAAAGGAAGTAT+AGG + chr4_2:43921444-43921463 Msa0601330:CDS 50.0%
CAGTACAAGGGAGGGCTCAA+AGG + chr4_2:43921435-43921454 Msa0601330:CDS 55.0%
CAGTACAAGGGAGGGCTCAA+AGG + chr4_2:43921435-43921454 Msa0601330:CDS 55.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 43919845 43921733 43919845 ID=Msa0601330;Name=Msa0601330
chr4_2 mRNA 43919845 43921733 43919845 ID=Msa0601330-mRNA-1;Parent=Msa0601330;Name=Msa0601330-mRNA-1;_AED=0.03;_eAED=0.03;_QI=79|0.5|0.66|1|1|1|3|268|382
chr4_2 exon 43919845 43919978 43919845 ID=Msa0601330-mRNA-1:exon:9610;Parent=Msa0601330-mRNA-1
chr4_2 exon 43920069 43921058 43920069 ID=Msa0601330-mRNA-1:exon:9611;Parent=Msa0601330-mRNA-1
chr4_2 exon 43921362 43921733 43921362 ID=Msa0601330-mRNA-1:exon:9612;Parent=Msa0601330-mRNA-1
chr4_2 five_prime_UTR 43919845 43919923 43919845 ID=Msa0601330-mRNA-1:five_prime_utr;Parent=Msa0601330-mRNA-1
chr4_2 CDS 43919924 43919978 43919924 ID=Msa0601330-mRNA-1:cds;Parent=Msa0601330-mRNA-1
chr4_2 CDS 43920069 43921058 43920069 ID=Msa0601330-mRNA-1:cds;Parent=Msa0601330-mRNA-1
chr4_2 CDS 43921362 43921465 43921362 ID=Msa0601330-mRNA-1:cds;Parent=Msa0601330-mRNA-1
chr4_2 three_prime_UTR 43921466 43921733 43921466 ID=Msa0601330-mRNA-1:three_prime_utr;Parent=Msa0601330-mRNA-1
Gene Sequence

>Msa0601330

ATGACAACCTTTTCCTTCTTCAAATCACTTCTTTTCTTTCTTCTCACCATATCAGATTCATTTATGCAAATCAATGGCCTAAGTTTTGGAATAAACTATGGACAAATAGCAACCAATCTACCATCTCATTCAAGAGTAGCTGTTCTTATAAGATCAATGAATGTGACAAGAATCAAACTCTATGATGCTGATCCAAATGTTCTACTTGCATTCTCCAAATCAAATGTTGAATTTGTTATAGGAATTGGAAATGAGCATTTACAAAATATGACAAACCCTTCTAAAGCTCAAAATTGGATTCAACATCATGTTCTACCTTACCTTTCACAAACCAAAATAAATTGCATAACTGTTGGAAATGAAGTTTTCAATAGCAATGATACTCAACTAATGTTGAATCTTCTACCTTCAATGCAAAATGTTCATAATTCACTTGTTAAGCTTGGATTAGACCAAGTAATTACTGTTACAACAGCTCATTCTTTTAACATTTTGGATAATTCTTACCCTCCTTCGTCCGGTTCTTTTAGGTCAGATTTGATTCAATATATTCAACCAATTGTTGAATTTCTTGATGAAATTAAATCATCTTTTCATATTAATGCTTACCCTTTTTTTGCATATAAAGATAACCCTAATGAGGTATCTTTAAACTATGCATTATTTCAACCAAATGAAGGTTTGGTTGATCCAAACACAAATTTACATTATGATAACATGTTGTATGCTCAAATTGATGCTGTTTATGCTGCAATCAAAGTGATAGGTTATACCAATGTTGAAGTTAAGGTTTCTGAGACAGGTTGGCCTTCAAATGGCGACACCGATGAAATTGGTGCTACACCACAAAATGCAAAATTGTACAATGGAAATTTGCTTAGAAGAATTGAGGAAAGACATGGAACTCCTGGAAATCCATTGGTTCCAATTGATGTATATGTTTTTGCACTTTTTAATGAAGATTTGAAACCTGGTCCTGCTTCAGAAAGAAACTATGGACTTTATTATCCTGATGGTAGACCAGTTTATAACATTGGATTACAAGATTTTGTCTTTCAATGTTCTTGCATGTATAGTTACATGCTTGATCTTTGCTTTAGAGATTTTAGAATCATGATCAGTACAAGGGAGGGCTCAAAGGAAGTATAG
Protein sequence

>Msa0601330

MTTFSFFKSLLFFLLTISDSFMQINGLSFGINYGQIATNLPSHSRVAVLIRSMNVTRIKLYDADPNVLLAFSKSNVEFVIGIGNEHLQNMTNPSKAQNWIQHHVLPYLSQTKINCITVGNEVFNSNDTQLMLNLLPSMQNVHNSLVKLGLDQVITVTTAHSFNILDNSYPPSSGSFRSDLIQYIQPIVEFLDEIKSSFHINAYPFFAYKDNPNEVSLNYALFQPNEGLVDPNTNLHYDNMLYAQIDAVYAAIKVIGYTNVEVKVSETGWPSNGDTDEIGATPQNAKLYNGNLLRRIEERHGTPGNPLVPIDVYVFALFNEDLKPGPASERNYGLYYPDGRPVYNIGLQDFVFQCSCMYSYMLDLCFRDFRIMISTREGSKEV*