AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0781030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0781030 MtrunA17_Chr5g0441201 92.277 505 25 3 1 505 1 491 0.0 868
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0781030 AT5G19500.1 73.585 424 91 5 88 504 91 500 0.0 579
Msa0781030 AT2G33260.2 23.762 505 301 16 35 488 60 531 1.05e-23 104
Msa0781030 AT2G33260.1 24.658 438 258 15 102 488 11 427 1.13e-19 92.0

Find 113 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTTATTGGTGCAATTAA+TGG 0.137815 5_2:+63270759 Msa0781030:CDS
ACCACTTATACTCTCATTAT+TGG 0.145271 5_2:+63272691 Msa0781030:CDS
TAAATTTCATCCAATATTTA+AGG 0.148372 5_2:-63273393 None:intergenic
AAACAGTGTAAAGTTATTTA+AGG 0.149158 5_2:+63273295 Msa0781030:three_prime_UTR
ATCTTACATTGGATTTGTTT+TGG 0.161342 5_2:+63272059 Msa0781030:CDS
CTTCCTCCTGGAACTATTTC+AGG 0.169530 5_2:-63273106 None:intergenic
CGCTTATTCTGTTCCTAGTT+TGG 0.199834 5_2:+63271811 Msa0781030:CDS
AAACTTTGTTCCTTAAATAT+TGG 0.215235 5_2:+63273383 Msa0781030:three_prime_UTR
TCCTTAACCCTCCAGTTTCT+TGG 0.222339 5_2:+63272819 Msa0781030:intron
TCTTTAAAGTGGCTTGATTA+AGG 0.258605 5_2:-63268234 None:intergenic
CTAATGGTTCTTGGTTGTTC+AGG 0.261901 5_2:+63273139 Msa0781030:CDS
GCTTTATTGGTGCAATTAAT+GGG 0.276183 5_2:+63270760 Msa0781030:CDS
CCTTAACCCTCCAGTTTCTT+GGG 0.280799 5_2:+63272820 Msa0781030:intron
TACTGTCCCTAAAGTTCTTC+TGG 0.295009 5_2:-63270046 None:intergenic
CATTCTTTGTTGGGCATTCA+TGG 0.297126 5_2:+63269419 Msa0781030:CDS
TCAATGGCCAGAAGAACTTT+AGG 0.325642 5_2:+63270039 Msa0781030:CDS
TTTAAAGCCTTGGACTTTGC+TGG 0.326378 5_2:+63272727 Msa0781030:CDS
ATTTGTAGCCAGCGCTTTAT+TGG 0.335131 5_2:+63270747 Msa0781030:intron
TTGGACTTTGCTGGAACATA+TGG 0.347713 5_2:+63272736 Msa0781030:CDS
CATAGTAGTTGTGTCTTCCT+TGG 0.350883 5_2:-63268019 None:intergenic
ATAACCCTACTAATGGTTCT+TGG 0.355239 5_2:+63273130 Msa0781030:CDS
CAGACGAACTCCGGATTCTC+AGG 0.355632 5_2:-63272852 None:intergenic
AACAGTGTAAAGTTATTTAA+GGG 0.356671 5_2:+63273296 Msa0781030:three_prime_UTR
CGCACTCTCATTTGTTTACC+AGG 0.361529 5_2:+63271516 Msa0781030:CDS
TGTATGGAAGAGGCCTGTTT+TGG 0.367187 5_2:-63272652 None:intergenic
AGATCTTCAAATGGAACAAT+TGG 0.371731 5_2:+63271897 Msa0781030:CDS
ACAAACAGAAACAAACAAAA+AGG 0.374448 5_2:-63273245 None:intergenic
AAACTACCTGAAATAGTTCC+AGG 0.375276 5_2:+63273100 Msa0781030:CDS
CAGTTACTTGCATTCTTTGT+TGG 0.386325 5_2:+63269409 Msa0781030:CDS
CAGTAGGAGTTCAAATTTCA+TGG 0.400109 5_2:+63270064 Msa0781030:CDS
ATTAATGGGGTTCTAGTAGT+TGG 0.405738 5_2:+63270774 Msa0781030:CDS
GAAGATCTCAACTGTTGTAA+TGG 0.406888 5_2:-63271882 None:intergenic
AAGGAGACTTGTTAAAAGTA+AGG 0.407800 5_2:+63271643 Msa0781030:CDS
ATCTCCCAACAGGCCAAAAC+AGG 0.411214 5_2:+63272639 Msa0781030:CDS
GTTCTTTGTACAAATCTTGA+AGG 0.411816 5_2:+63271624 Msa0781030:CDS
ATCTGAAGAACGAGCTATAT+AGG 0.422804 5_2:-63270370 None:intergenic
TCAAGATTTGTACAAAGAAC+AGG 0.422918 5_2:-63271621 None:intergenic
GGAACTAAAGTCAGTATGTA+TGG 0.423140 5_2:-63272668 None:intergenic
CCTGCAGTGACACAAGAATC+AGG 0.423818 5_2:+63269372 Msa0781030:CDS
AGTTACTTGCATTCTTTGTT+GGG 0.425510 5_2:+63269410 Msa0781030:CDS
CGGCTCTGGCGGTGTATCAT+TGG 0.428881 5_2:+63269631 Msa0781030:CDS
CATTGGAGCTGCTTGGAAGT+TGG 0.446073 5_2:-63271479 None:intergenic
GAAGGTCAATAGAAACAGAT+TGG 0.449338 5_2:-63273360 None:intergenic
CAATGGCCAGAAGAACTTTA+GGG 0.450193 5_2:+63270040 Msa0781030:CDS
GAAATATTGCAGGTAGGTGC+AGG 0.453044 5_2:+63269336 Msa0781030:intron
GATTGTCACCAACAGTTCCT+AGG 0.453386 5_2:-63271845 None:intergenic
CTGCAATGTCTTGGTCAGAT+AGG 0.453502 5_2:+63273053 Msa0781030:CDS
GGAAGGAGGCCCTGAGAATC+CGG 0.455832 5_2:+63272842 Msa0781030:CDS
GAAGACACAACTACTATGTA+AGG 0.458123 5_2:+63268024 Msa0781030:CDS
TTTGGAGGCATATGCTACTT+TGG 0.460980 5_2:+63270537 Msa0781030:CDS
TCAGTGTTAAATCTCCCAAC+AGG 0.465991 5_2:+63272629 Msa0781030:intron
ACAAATGAGAGTGCGATAAT+CGG 0.466385 5_2:-63271508 None:intergenic
GTTTGGAATGGTGTTATCCT+AGG 0.466536 5_2:+63271828 Msa0781030:CDS
AACAACCAAGAACCATTAGT+AGG 0.469226 5_2:-63273135 None:intergenic
AGTAGGGTTATCCTTCCTCC+TGG 0.469240 5_2:-63273118 None:intergenic
AGATTATGTCCAGGTATCAA+TGG 0.471981 5_2:+63270023 Msa0781030:intron
ACCCTCCAGTTTCTTGGGGA+AGG 0.472191 5_2:+63272825 Msa0781030:intron
ATTTAAGGAACAAAGTTTGA+AGG 0.474256 5_2:-63273378 None:intergenic
TTAAAAGAGCATCAAAATGC+AGG 0.476813 5_2:-63271453 None:intergenic
GTCAACACCATGTGTGATCT+CGG 0.477231 5_2:+63269611 Msa0781030:CDS
GGATAACACCATTCCAAACT+AGG 0.477436 5_2:-63271824 None:intergenic
GCGATAATCGGTATACTCAT+TGG 0.479827 5_2:-63271496 None:intergenic
ATTCTGTTCCTAGTTTGGAA+TGG 0.481698 5_2:+63271816 Msa0781030:CDS
TGCAGGAGTGCAATAATACT+AGG 0.483245 5_2:+63271777 Msa0781030:intron
AGTGAGAAGATCTCAACTAT+AGG 0.484893 5_2:-63272021 None:intergenic
GAGGCATATGCTACTTTGGA+AGG 0.486837 5_2:+63270541 Msa0781030:CDS
ACCATGTGTGATCTCGGCTC+TGG 0.490461 5_2:+63269617 Msa0781030:CDS
TCCAATAATGAGAGTATAAG+TGG 0.490618 5_2:-63272692 None:intergenic
AGGAAGGATAACCCTACTAA+TGG 0.492382 5_2:+63273123 Msa0781030:CDS
GAAATCCTGCAGGTTGTGAC+AGG 0.502128 5_2:+63269566 Msa0781030:intron
TTATTCCAGCTGCAATGTCT+TGG 0.502595 5_2:+63273044 Msa0781030:CDS
AAATTTGGAATATGGAAGAA+TGG 0.508684 5_2:-63267986 None:intergenic
ACCAGGTTCTCTCTTTAAAG+TGG 0.513763 5_2:-63268245 None:intergenic
CCTGATTCTTGTGTCACTGC+AGG 0.516721 5_2:-63269372 None:intergenic
TGTAATGGATCTAATCCCAT+TGG 0.516758 5_2:-63271867 None:intergenic
GTATACTCATTGGAGCTGCT+TGG 0.518050 5_2:-63271486 None:intergenic
CTTAACCCTCCAGTTTCTTG+GGG 0.520726 5_2:+63272821 Msa0781030:intron
CAACAGTTGAGATCTTCAAA+TGG 0.523385 5_2:+63271888 Msa0781030:CDS
CTGAAATAGTTCCAGGAGGA+AGG 0.527976 5_2:+63273107 Msa0781030:CDS
AGGCAATCAGAAGGGCGTAA+TGG 0.529231 5_2:-63270350 None:intergenic
CTCCAGTTTCTTGGGGAAGG+AGG 0.542218 5_2:+63272828 Msa0781030:intron
GCAATTGCTACATCTTACAT+TGG 0.543378 5_2:+63272048 Msa0781030:CDS
TTTATCTCACAGACGAACTC+CGG 0.543556 5_2:-63272861 None:intergenic
GCCACTTTAAAGAGAGAACC+TGG 0.543559 5_2:+63268244 Msa0781030:CDS
AAAGTCAGTATGTATGGAAG+AGG 0.544155 5_2:-63272662 None:intergenic
TCTGACCAAGACATTGCAGC+TGG 0.549499 5_2:-63273049 None:intergenic
AGAAGAACTTTAGGGACAGT+AGG 0.553655 5_2:+63270048 Msa0781030:CDS
ACTGTTGGTGACAATCCAAT+GGG 0.561349 5_2:+63271852 Msa0781030:CDS
AACTGTTGGTGACAATCCAA+TGG 0.566366 5_2:+63271851 Msa0781030:CDS
GACTTTGCTGGAACATATGG+AGG 0.569015 5_2:+63272739 Msa0781030:CDS
TTTCCTGGTTGCAGGCACTA+CGG 0.571197 5_2:+63268419 Msa0781030:CDS
ACAGTGTAAAGTTATTTAAG+GGG 0.575409 5_2:+63273297 Msa0781030:three_prime_UTR
TATAATACATACAGTCTGCA+AGG 0.577013 5_2:-63272095 None:intergenic
AGAAGGAAGATACAAAGAAG+AGG 0.582114 5_2:-63268077 None:intergenic
AAACCGTAGTGCCTGCAACC+AGG 0.585575 5_2:-63268422 None:intergenic
CAGTGTAAAGTTATTTAAGG+GGG 0.592473 5_2:+63273298 Msa0781030:three_prime_UTR
GGTGTTATCCTAGGAACTGT+TGG 0.594469 5_2:+63271837 Msa0781030:CDS
CTTTATTGGTGCAATTAATG+GGG 0.594696 5_2:+63270761 Msa0781030:CDS
AAATATTGCAGGTAGGTGCA+GGG 0.597429 5_2:+63269337 Msa0781030:intron
GAGCTATATAGGCAATCAGA+AGG 0.598567 5_2:-63270359 None:intergenic
CTATATTAGACAGTTGCAAG+TGG 0.602825 5_2:+63271427 Msa0781030:intron
AGTGCAATAATACTAGGCAC+TGG 0.606834 5_2:+63271783 Msa0781030:CDS
ACAACCAAGAACCATTAGTA+GGG 0.608420 5_2:-63273134 None:intergenic
ATGTGTGATCTCGGCTCTGG+CGG 0.610785 5_2:+63269620 Msa0781030:CDS
TAATTGCACCAATAAAGCGC+TGG 0.615464 5_2:-63270755 None:intergenic
ATATGTTCCAGCAAAGTCCA+AGG 0.621878 5_2:-63272734 None:intergenic
GCCAGAGCCGAGATCACACA+TGG 0.623234 5_2:-63269618 None:intergenic
GTTGTGAGAAACATTTGTGA+AGG 0.625827 5_2:-63268117 None:intergenic
AGCTATATAGGCAATCAGAA+GGG 0.643728 5_2:-63270358 None:intergenic
AATAATGAGAGTATAAGTGG+TGG 0.643933 5_2:-63272689 None:intergenic
AGACGAACTCCGGATTCTCA+GGG 0.659793 5_2:-63272851 None:intergenic
CAAACTAGGAACAGAATAAG+CGG 0.669435 5_2:-63271810 None:intergenic
CTACCTGAAATAGTTCCAGG+AGG 0.717690 5_2:+63273103 Msa0781030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAAAATGTAAATAAAG+TGG - chr5_2:63268574-63268593 None:intergenic 10.0%
!!! TCTTAAAAAAATGATTAGTT+TGG + chr5_2:63268677-63268696 Msa0781030:intron 15.0%
!!! TAGATATTTAGAGATATTTT+AGG - chr5_2:63269802-63269821 None:intergenic 15.0%
!! TTACTAATACTAATCTAAAT+AGG - chr5_2:63269995-63270014 None:intergenic 15.0%
!! TATAGTTTATGAATTCTATT+AGG - chr5_2:63271094-63271113 None:intergenic 15.0%
!! TGTAAAAAAATAACTTATTG+CGG + chr5_2:63272397-63272416 Msa0781030:intron 15.0%
!! AATTAAAATTAACATGGAAA+TGG - chr5_2:63272789-63272808 None:intergenic 15.0%
!! AATTGCAATTAAAATTAACA+TGG - chr5_2:63272795-63272814 None:intergenic 15.0%
!! TAAATTTCATCCAATATTTA+AGG - chr5_2:63273396-63273415 None:intergenic 15.0%
!!! TGATCAAAAAATTTGGAATA+TGG - chr5_2:63267997-63268016 None:intergenic 20.0%
!!! TTTTTTCTATTCATAGAAGA+AGG - chr5_2:63268097-63268116 None:intergenic 20.0%
!! GATAAATATAAGAGAAAAAG+AGG - chr5_2:63268292-63268311 None:intergenic 20.0%
!! ACTTATAAGTTGTAAAGAAA+TGG + chr5_2:63268890-63268909 Msa0781030:intron 20.0%
!! GAATTACATTCAAATGAAAA+GGG - chr5_2:63269189-63269208 None:intergenic 20.0%
!! TGAATTACATTCAAATGAAA+AGG - chr5_2:63269190-63269209 None:intergenic 20.0%
!! TTTCATTTGAATGTAATTCA+AGG + chr5_2:63269190-63269209 Msa0781030:intron 20.0%
!!! TTATATTAATTTTTCAGCAG+AGG - chr5_2:63269529-63269548 None:intergenic 20.0%
!!! AGATATTTTAGGAACTAATA+TGG - chr5_2:63269791-63269810 None:intergenic 20.0%
!!! TTTTCAATTATGCAATAGTT+AGG + chr5_2:63270219-63270238 Msa0781030:intron 20.0%
!! TTTCAATTATGCAATAGTTA+GGG + chr5_2:63270220-63270239 Msa0781030:intron 20.0%
!! GAAAATTAAGACATAATTTG+AGG - chr5_2:63270444-63270463 None:intergenic 20.0%
!!! TAATTTTCATATACTTTGTC+AGG + chr5_2:63270456-63270475 Msa0781030:intron 20.0%
!!! ACTTTGTTTTCATTGATTTT+TGG + chr5_2:63270519-63270538 Msa0781030:CDS 20.0%
!!! CTATTTTCCTAAATTATTAC+CGG - chr5_2:63270648-63270667 None:intergenic 20.0%
!!! AAGTTTTTCATGTCAAAATT+AGG + chr5_2:63270827-63270846 Msa0781030:intron 20.0%
!! GATAACATTGTTCTTATAAA+TGG + chr5_2:63271029-63271048 Msa0781030:intron 20.0%
!!! TCAAATTGATTTAGATTAGA+CGG + chr5_2:63271250-63271269 Msa0781030:intron 20.0%
!! ATATAAAATAAAATAACCGC+TGG - chr5_2:63271322-63271341 None:intergenic 20.0%
!!! TATGATAACGAAATATTACA+TGG + chr5_2:63271339-63271358 Msa0781030:intron 20.0%
!! TGCAAAAGAAAAAAACATTA+GGG - chr5_2:63271761-63271780 None:intergenic 20.0%
!!! AAGGCTTTAAAAATATTTCA+GGG - chr5_2:63272718-63272737 None:intergenic 20.0%
!!! AATGATGAATACTTTTTCAA+AGG - chr5_2:63273204-63273223 None:intergenic 20.0%
!!! AAAGTATTCATCATTTTACA+TGG + chr5_2:63273209-63273228 Msa0781030:three_prime_UTR 20.0%
!! AAACAGTGTAAAGTTATTTA+AGG + chr5_2:63273295-63273314 Msa0781030:three_prime_UTR 20.0%
!! AACAGTGTAAAGTTATTTAA+GGG + chr5_2:63273296-63273315 Msa0781030:three_prime_UTR 20.0%
!! AAACTTTGTTCCTTAAATAT+TGG + chr5_2:63273383-63273402 Msa0781030:three_prime_UTR 20.0%
! GAGCTACAAAAACATATAAA+TGG + chr5_2:63267934-63267953 Msa0781030:exon 25.0%
!! AAATTTGGAATATGGAAGAA+TGG - chr5_2:63267989-63268008 None:intergenic 25.0%
!! CTTGGTTTGATCAAAAAATT+TGG - chr5_2:63268004-63268023 None:intergenic 25.0%
!!! CAAATTTTTTGATCAAACCA+AGG + chr5_2:63268002-63268021 Msa0781030:CDS 25.0%
!!! ACTTGTGTTTTAACATTAAC+AGG + chr5_2:63268378-63268397 Msa0781030:intron 25.0%
! CATATGAAATTGCAATACAT+AGG - chr5_2:63268527-63268546 None:intergenic 25.0%
! TATAAGTTGTAAAGAAATGG+AGG + chr5_2:63268893-63268912 Msa0781030:intron 25.0%
! ATAAGTTGTAAAGAAATGGA+GGG + chr5_2:63268894-63268913 Msa0781030:intron 25.0%
!! ATTATTTCTTAACTCCCTAA+AGG + chr5_2:63269656-63269675 Msa0781030:intron 25.0%
!!! ATTTTAGTATCGTTCCTTTA+GGG - chr5_2:63269673-63269692 None:intergenic 25.0%
!!! TATTCTCATAATTTTTTCGC+TGG - chr5_2:63269696-63269715 None:intergenic 25.0%
! ACTAATCTAAATAGGTAGAA+TGG - chr5_2:63269987-63270006 None:intergenic 25.0%
! ATTTAATGCAAGCAAACTAT+TGG + chr5_2:63270111-63270130 Msa0781030:intron 25.0%
!!! TTGTTTTCATTGATTTTTGG+AGG + chr5_2:63270522-63270541 Msa0781030:CDS 25.0%
!! ATACGTCTAATTTTTGTTGA+GGG - chr5_2:63271006-63271025 None:intergenic 25.0%
!! AATACGTCTAATTTTTGTTG+AGG - chr5_2:63271007-63271026 None:intergenic 25.0%
! CAACAAAAATTAGACGTATT+CGG + chr5_2:63271007-63271026 Msa0781030:intron 25.0%
! GCAAAATCACAAATAACAAA+TGG + chr5_2:63271125-63271144 Msa0781030:intron 25.0%
! TTACACACTATAAACAATCT+CGG + chr5_2:63271182-63271201 Msa0781030:intron 25.0%
! CGAAATATTACATGGTTTAT+AGG + chr5_2:63271347-63271366 Msa0781030:intron 25.0%
! TGTTCAAAAATTGGAGATTA+AGG - chr5_2:63271548-63271567 None:intergenic 25.0%
!! AATCTCCAATTTTTGAACAA+TGG + chr5_2:63271549-63271568 Msa0781030:intron 25.0%
! TTTGTCCATTGTTCAAAAAT+TGG - chr5_2:63271557-63271576 None:intergenic 25.0%
! TTTAAGCAAAGAACAAAGAT+TGG - chr5_2:63271677-63271696 None:intergenic 25.0%
!!! TTTTTTTCCTCTTTAAGACT+TGG + chr5_2:63271704-63271723 Msa0781030:intron 25.0%
! AAATATTCCAAGTCTTAAAG+AGG - chr5_2:63271714-63271733 None:intergenic 25.0%
! CTGCAAAAGAAAAAAACATT+AGG - chr5_2:63271762-63271781 None:intergenic 25.0%
!!! CTAATGTTTTTTTCTTTTGC+AGG + chr5_2:63271760-63271779 Msa0781030:intron 25.0%
!!! ATCTTACATTGGATTTGTTT+TGG + chr5_2:63272059-63272078 Msa0781030:CDS 25.0%
!!! TCTTACATTGGATTTGTTTT+GGG + chr5_2:63272060-63272079 Msa0781030:CDS 25.0%
! CAATAGATAAGAAAGAAGTT+GGG - chr5_2:63272124-63272143 None:intergenic 25.0%
! TCAATAGATAAGAAAGAAGT+TGG - chr5_2:63272125-63272144 None:intergenic 25.0%
!! TCTATTGATTAAAGCTAATG+CGG + chr5_2:63272137-63272156 Msa0781030:intron 25.0%
! TCATTAGATAAAATGCAAGT+GGG - chr5_2:63272240-63272259 None:intergenic 25.0%
! TTCATTAGATAAAATGCAAG+TGG - chr5_2:63272241-63272260 None:intergenic 25.0%
! TACAAATTGATGTCAAATAG+AGG - chr5_2:63272381-63272400 None:intergenic 25.0%
!! TTTAAAATGTGCAACATACT+TGG - chr5_2:63272550-63272569 None:intergenic 25.0%
!!! TGTTGCACATTTTAAAGATT+AGG + chr5_2:63272554-63272573 Msa0781030:intron 25.0%
!!! CAAGGCTTTAAAAATATTTC+AGG - chr5_2:63272719-63272738 None:intergenic 25.0%
!!! CTGAAATATTTTTAAAGCCT+TGG + chr5_2:63272717-63272736 Msa0781030:CDS 25.0%
! TCTGTGAGATAAATAAAGTT+AGG + chr5_2:63272871-63272890 Msa0781030:intron 25.0%
! ACAAACAGAAACAAACAAAA+AGG - chr5_2:63273248-63273267 None:intergenic 25.0%
! ACAGTGTAAAGTTATTTAAG+GGG + chr5_2:63273297-63273316 Msa0781030:three_prime_UTR 25.0%
! ATTTAAGGAACAAAGTTTGA+AGG - chr5_2:63273381-63273400 None:intergenic 25.0%
! CTTCATCATTCTTTTCTTCT+TGG - chr5_2:63268162-63268181 None:intergenic 30.0%
!! TCTTTAAAGTGGCTTGATTA+AGG - chr5_2:63268237-63268256 None:intergenic 30.0%
AGAAAAAGAAAGAGCAAAAG+TGG - chr5_2:63268449-63268468 None:intergenic 30.0%
AAATGACACTTATTGTGAGA+CGG - chr5_2:63268642-63268661 None:intergenic 30.0%
!!! CTCACAATAAGTGTCATTTT+AGG + chr5_2:63268643-63268662 Msa0781030:intron 30.0%
!!! TTTCGACTTTTTCGTAATTG+CGG + chr5_2:63269258-63269277 Msa0781030:intron 30.0%
TTAGCATTTGAGTGAAATGA+TGG - chr5_2:63269316-63269335 None:intergenic 30.0%
CAAATGCTAAGAAATATTGC+AGG + chr5_2:63269326-63269345 Msa0781030:intron 30.0%
AGTTACTTGCATTCTTTGTT+GGG + chr5_2:63269410-63269429 Msa0781030:CDS 30.0%
TTGTAAGAAGCAAAATCATG+AGG - chr5_2:63269457-63269476 None:intergenic 30.0%
!! GATTTTAGTATCGTTCCTTT+AGG - chr5_2:63269674-63269693 None:intergenic 30.0%
TAGGAACTAATATGGTAAAG+TGG - chr5_2:63269783-63269802 None:intergenic 30.0%
TCTAAATAGGTAGAATGGAA+AGG - chr5_2:63269982-63270001 None:intergenic 30.0%
ACTTGATTTAGATTATGTCC+AGG + chr5_2:63270014-63270033 Msa0781030:intron 30.0%
! CACTTTGATTTAAGAGAAAC+GGG - chr5_2:63270188-63270207 None:intergenic 30.0%
! CCACTTTGATTTAAGAGAAA+CGG - chr5_2:63270189-63270208 None:intergenic 30.0%
! GATATCTTGACGAATTTTCT+TGG + chr5_2:63270390-63270409 Msa0781030:CDS 30.0%
! TTTTCATATACTTTGTCAGG+AGG + chr5_2:63270459-63270478 Msa0781030:intron 30.0%
! GCTTTATTGGTGCAATTAAT+GGG + chr5_2:63270760-63270779 Msa0781030:CDS 30.0%
CTTTATTGGTGCAATTAATG+GGG + chr5_2:63270761-63270780 Msa0781030:CDS 30.0%
AGTAAACTTCATATGATCTG+TGG + chr5_2:63270928-63270947 Msa0781030:intron 30.0%
! TACGTCTAATTTTTGTTGAG+GGG - chr5_2:63271005-63271024 None:intergenic 30.0%
ACATTGTTCTTATAAATGGC+AGG + chr5_2:63271033-63271052 Msa0781030:intron 30.0%
TACACACTATAAACAATCTC+GGG + chr5_2:63271183-63271202 Msa0781030:intron 30.0%
!! AATCTCGGGATATTATTTTG+CGG + chr5_2:63271197-63271216 Msa0781030:intron 30.0%
!! TTAAAAGAGCATCAAAATGC+AGG - chr5_2:63271456-63271475 None:intergenic 30.0%
TCAAGATTTGTACAAAGAAC+AGG - chr5_2:63271624-63271643 None:intergenic 30.0%
GTTCTTTGTACAAATCTTGA+AGG + chr5_2:63271624-63271643 Msa0781030:CDS 30.0%
!! AAGGAGACTTGTTAAAAGTA+AGG + chr5_2:63271643-63271662 Msa0781030:CDS 30.0%
AGATCTTCAAATGGAACAAT+TGG + chr5_2:63271897-63271916 Msa0781030:CDS 30.0%
TGCAGTAGTAGCTAAAAAAA+TGG - chr5_2:63271942-63271961 None:intergenic 30.0%
TATAATACATACAGTCTGCA+AGG - chr5_2:63272098-63272117 None:intergenic 30.0%
AATAACTTATTGCGGAACAA+TGG + chr5_2:63272405-63272424 Msa0781030:intron 30.0%
! AATAATGAGAGTATAAGTGG+TGG - chr5_2:63272692-63272711 None:intergenic 30.0%
ACCACTTATACTCTCATTAT+TGG + chr5_2:63272691-63272710 Msa0781030:CDS 30.0%
! TCCAATAATGAGAGTATAAG+TGG - chr5_2:63272695-63272714 None:intergenic 30.0%
TTAGTTAAGAGCGAATTGTT+CGG - chr5_2:63272936-63272955 None:intergenic 30.0%
TTCGCTCTTAACTAAAGTTT+AGG + chr5_2:63272941-63272960 Msa0781030:intron 30.0%
CAGTGTAAAGTTATTTAAGG+GGG + chr5_2:63273298-63273317 Msa0781030:three_prime_UTR 30.0%
GAAGACACAACTACTATGTA+AGG + chr5_2:63268024-63268043 Msa0781030:CDS 35.0%
AGAAGGAAGATACAAAGAAG+AGG - chr5_2:63268080-63268099 None:intergenic 35.0%
GTTGTGAGAAACATTTGTGA+AGG - chr5_2:63268120-63268139 None:intergenic 35.0%
AAAATAGCAATGCACTAACC+AGG - chr5_2:63268265-63268284 None:intergenic 35.0%
! CTTATCTAGTGCAATTTTCC+TGG + chr5_2:63268404-63268423 Msa0781030:CDS 35.0%
TGCTTATATAAGCCTGTTCA+TGG + chr5_2:63268545-63268564 Msa0781030:intron 35.0%
ATAAAGTGGTTTCCATGAAC+AGG - chr5_2:63268560-63268579 None:intergenic 35.0%
AGTAAGAGTAGTGCTATAGT+TGG + chr5_2:63268760-63268779 Msa0781030:intron 35.0%
AGTGTTTATCAGACTATGCA+GGG + chr5_2:63268940-63268959 Msa0781030:intron 35.0%
TCCGATATCGATATCTTATG+CGG + chr5_2:63269095-63269114 Msa0781030:intron 35.0%
ACCGCATAAGATATCGATAT+CGG - chr5_2:63269099-63269118 None:intergenic 35.0%
TGCTAAGAAATATTGCAGGT+AGG + chr5_2:63269330-63269349 Msa0781030:intron 35.0%
CAGTTACTTGCATTCTTTGT+TGG + chr5_2:63269409-63269428 Msa0781030:CDS 35.0%
AATATGGTAAAGTGGCATCA+TGG - chr5_2:63269775-63269794 None:intergenic 35.0%
! CACTTGTGCATTCTATCTTT+TGG + chr5_2:63269931-63269950 Msa0781030:intron 35.0%
AGATTATGTCCAGGTATCAA+TGG + chr5_2:63270023-63270042 Msa0781030:intron 35.0%
CAGTAGGAGTTCAAATTTCA+TGG + chr5_2:63270064-63270083 Msa0781030:CDS 35.0%
TCAACATGCGTAACATAACA+CGG + chr5_2:63270137-63270156 Msa0781030:intron 35.0%
CCGTTTCTCTTAAATCAAAG+TGG + chr5_2:63270186-63270205 Msa0781030:intron 35.0%
! CAATGTGATTTTGTTGCAGT+TGG + chr5_2:63270313-63270332 Msa0781030:intron 35.0%
AGCTATATAGGCAATCAGAA+GGG - chr5_2:63270361-63270380 None:intergenic 35.0%
ATCTGAAGAACGAGCTATAT+AGG - chr5_2:63270373-63270392 None:intergenic 35.0%
! ATAATTTGAGGCCTAGTTAG+TGG - chr5_2:63270432-63270451 None:intergenic 35.0%
TTGAATGTAAGCACATGCTT+CGG + chr5_2:63270674-63270693 Msa0781030:intron 35.0%
! CGCTTTATTGGTGCAATTAA+TGG + chr5_2:63270759-63270778 Msa0781030:CDS 35.0%
! ATTAATGGGGTTCTAGTAGT+TGG + chr5_2:63270774-63270793 Msa0781030:CDS 35.0%
TCACAGATATATAGCCATAC+AGG + chr5_2:63270978-63270997 Msa0781030:intron 35.0%
TTAGATTAGACGGTTGAGAT+TGG + chr5_2:63271260-63271279 Msa0781030:intron 35.0%
CTATATTAGACAGTTGCAAG+TGG + chr5_2:63271427-63271446 Msa0781030:intron 35.0%
! ACAAATGAGAGTGCGATAAT+CGG - chr5_2:63271511-63271530 None:intergenic 35.0%
CAAACTAGGAACAGAATAAG+CGG - chr5_2:63271813-63271832 None:intergenic 35.0%
ATTCTGTTCCTAGTTTGGAA+TGG + chr5_2:63271816-63271835 Msa0781030:CDS 35.0%
!! TGTAATGGATCTAATCCCAT+TGG - chr5_2:63271870-63271889 None:intergenic 35.0%
GAAGATCTCAACTGTTGTAA+TGG - chr5_2:63271885-63271904 None:intergenic 35.0%
CAACAGTTGAGATCTTCAAA+TGG + chr5_2:63271888-63271907 Msa0781030:CDS 35.0%
AGGCTGCAGAATCAAATTAA+GGG - chr5_2:63272004-63272023 None:intergenic 35.0%
TAGGCTGCAGAATCAAATTA+AGG - chr5_2:63272005-63272024 None:intergenic 35.0%
AGTGAGAAGATCTCAACTAT+AGG - chr5_2:63272024-63272043 None:intergenic 35.0%
GCAATTGCTACATCTTACAT+TGG + chr5_2:63272048-63272067 Msa0781030:CDS 35.0%
TATCTAATGAAAGCGAGTGT+CGG + chr5_2:63272250-63272269 Msa0781030:intron 35.0%
! AATTTGCTCAAATACCACTG+TGG + chr5_2:63272429-63272448 Msa0781030:intron 35.0%
AGCCTAAAGTTGTCAAATAG+CGG - chr5_2:63272490-63272509 None:intergenic 35.0%
TTGGTTATTAAGCATGCAAG+AGG - chr5_2:63272531-63272550 None:intergenic 35.0%
AAAGTCAGTATGTATGGAAG+AGG - chr5_2:63272665-63272684 None:intergenic 35.0%
GGAACTAAAGTCAGTATGTA+TGG - chr5_2:63272671-63272690 None:intergenic 35.0%
TTTCAGCCTGAATTTGAACT+CGG + chr5_2:63272904-63272923 Msa0781030:intron 35.0%
TAGTTAAGAGCGAATTGTTC+GGG - chr5_2:63272935-63272954 None:intergenic 35.0%
AAACTACCTGAAATAGTTCC+AGG + chr5_2:63273100-63273119 Msa0781030:CDS 35.0%
ATAACCCTACTAATGGTTCT+TGG + chr5_2:63273130-63273149 Msa0781030:CDS 35.0%
ACAACCAAGAACCATTAGTA+GGG - chr5_2:63273137-63273156 None:intergenic 35.0%
AACAACCAAGAACCATTAGT+AGG - chr5_2:63273138-63273157 None:intergenic 35.0%
!!! AGGGGGTATTTTAGAGAAAA+TGG + chr5_2:63273315-63273334 Msa0781030:three_prime_UTR 35.0%
GAAGGTCAATAGAAACAGAT+TGG - chr5_2:63273363-63273382 None:intergenic 35.0%
CATAGTAGTTGTGTCTTCCT+TGG - chr5_2:63268022-63268041 None:intergenic 40.0%
! ACCAGGTTCTCTCTTTAAAG+TGG - chr5_2:63268248-63268267 None:intergenic 40.0%
TAGTCTGATAAACACTGCTC+AGG - chr5_2:63268936-63268955 None:intergenic 40.0%
CAGTGTTTATCAGACTATGC+AGG + chr5_2:63268939-63268958 Msa0781030:intron 40.0%
GTTGAGTACACTTCAGATGA+AGG + chr5_2:63268962-63268981 Msa0781030:intron 40.0%
!! GAAGGCGTATTTGTTGTTTG+AGG + chr5_2:63268980-63268999 Msa0781030:intron 40.0%
! ATGATGCACTGACACAAACA+TGG - chr5_2:63269124-63269143 None:intergenic 40.0%
AATGCATAGCTGCAAAACGT+GGG + chr5_2:63269230-63269249 Msa0781030:intron 40.0%
AAATATTGCAGGTAGGTGCA+GGG + chr5_2:63269337-63269356 Msa0781030:intron 40.0%
CATTCTTTGTTGGGCATTCA+TGG + chr5_2:63269419-63269438 Msa0781030:CDS 40.0%
TCAATGGCCAGAAGAACTTT+AGG + chr5_2:63270039-63270058 Msa0781030:CDS 40.0%
CAATGGCCAGAAGAACTTTA+GGG + chr5_2:63270040-63270059 Msa0781030:CDS 40.0%
TACTGTCCCTAAAGTTCTTC+TGG - chr5_2:63270049-63270068 None:intergenic 40.0%
! AGAAGAACTTTAGGGACAGT+AGG + chr5_2:63270048-63270067 Msa0781030:CDS 40.0%
TTAAGAGAAACGGGAACAAC+TGG - chr5_2:63270179-63270198 None:intergenic 40.0%
TGCAATAGTTAGGGTTACAG+AGG + chr5_2:63270229-63270248 Msa0781030:intron 40.0%
GCAATAGTTAGGGTTACAGA+GGG + chr5_2:63270230-63270249 Msa0781030:intron 40.0%
GAGCTATATAGGCAATCAGA+AGG - chr5_2:63270362-63270381 None:intergenic 40.0%
! CTAGTTAGTGGCTTGTACAT+GGG - chr5_2:63270420-63270439 None:intergenic 40.0%
! TTTGGAGGCATATGCTACTT+TGG + chr5_2:63270537-63270556 Msa0781030:CDS 40.0%
GGAGACACCGGTAATAATTT+AGG + chr5_2:63270638-63270657 Msa0781030:intron 40.0%
CTCTAGTCTCTCACACATAA+CGG - chr5_2:63270707-63270726 None:intergenic 40.0%
ATTTGTAGCCAGCGCTTTAT+TGG + chr5_2:63270747-63270766 Msa0781030:intron 40.0%
TAATTGCACCAATAAAGCGC+TGG - chr5_2:63270758-63270777 None:intergenic 40.0%
!! GATATTATTTTGCGGCTGGA+CGG + chr5_2:63271205-63271224 Msa0781030:intron 40.0%
GCGATAATCGGTATACTCAT+TGG - chr5_2:63271499-63271518 None:intergenic 40.0%
TGGAGATTAAGGAAGTTACC+TGG - chr5_2:63271537-63271556 None:intergenic 40.0%
! TGCAGGAGTGCAATAATACT+AGG + chr5_2:63271777-63271796 Msa0781030:intron 40.0%
AGTGCAATAATACTAGGCAC+TGG + chr5_2:63271783-63271802 Msa0781030:CDS 40.0%
CGCTTATTCTGTTCCTAGTT+TGG + chr5_2:63271811-63271830 Msa0781030:CDS 40.0%
GGATAACACCATTCCAAACT+AGG - chr5_2:63271827-63271846 None:intergenic 40.0%
!! GTTTGGAATGGTGTTATCCT+AGG + chr5_2:63271828-63271847 Msa0781030:CDS 40.0%
!! AACTGTTGGTGACAATCCAA+TGG + chr5_2:63271851-63271870 Msa0781030:CDS 40.0%
!! ACTGTTGGTGACAATCCAAT+GGG + chr5_2:63271852-63271871 Msa0781030:CDS 40.0%
GAGTGTGTCAGACATATTTC+TGG - chr5_2:63272191-63272210 None:intergenic 40.0%
TTATGCAGTGTTGTCAACTG+TGG + chr5_2:63272312-63272331 Msa0781030:intron 40.0%
!! CTGTGGATAGTGGAAAATAG+CGG + chr5_2:63272329-63272348 Msa0781030:intron 40.0%
TCAAATACCACTGTGGTCTA+CGG + chr5_2:63272436-63272455 Msa0781030:intron 40.0%
AGCCGCTATTTGACAACTTT+AGG + chr5_2:63272485-63272504 Msa0781030:intron 40.0%
TCAGTGTTAAATCTCCCAAC+AGG + chr5_2:63272629-63272648 Msa0781030:intron 40.0%
! TTTAAAGCCTTGGACTTTGC+TGG + chr5_2:63272727-63272746 Msa0781030:CDS 40.0%
ATATGTTCCAGCAAAGTCCA+AGG - chr5_2:63272737-63272756 None:intergenic 40.0%
TTGGACTTTGCTGGAACATA+TGG + chr5_2:63272736-63272755 Msa0781030:CDS 40.0%
TTTATCTCACAGACGAACTC+CGG - chr5_2:63272864-63272883 None:intergenic 40.0%
TTCAGCCTGAATTTGAACTC+GGG + chr5_2:63272905-63272924 Msa0781030:intron 40.0%
GAAAACCCGAGTTCAAATTC+AGG - chr5_2:63272913-63272932 None:intergenic 40.0%
TTATTCCAGCTGCAATGTCT+TGG + chr5_2:63273044-63273063 Msa0781030:CDS 40.0%
AGGAAGGATAACCCTACTAA+TGG + chr5_2:63273123-63273142 Msa0781030:CDS 40.0%
CTAATGGTTCTTGGTTGTTC+AGG + chr5_2:63273139-63273158 Msa0781030:CDS 40.0%
! GCCACTTTAAAGAGAGAACC+TGG + chr5_2:63268244-63268263 Msa0781030:CDS 45.0%
! AGTGCAATTTTCCTGGTTGC+AGG + chr5_2:63268411-63268430 Msa0781030:CDS 45.0%
CAATGCATAGCTGCAAAACG+TGG + chr5_2:63269229-63269248 Msa0781030:intron 45.0%
GAAATATTGCAGGTAGGTGC+AGG + chr5_2:63269336-63269355 Msa0781030:intron 45.0%
CATCTGATGAGAAATCCTGC+AGG + chr5_2:63269556-63269575 Msa0781030:intron 45.0%
GTCAACACCATGTGTGATCT+CGG + chr5_2:63269611-63269630 Msa0781030:CDS 45.0%
TTCTTCTGGCCATTGATACC+TGG - chr5_2:63270035-63270054 None:intergenic 45.0%
! CCTAGTTAGTGGCTTGTACA+TGG - chr5_2:63270421-63270440 None:intergenic 45.0%
CCATGTACAAGCCACTAACT+AGG + chr5_2:63270418-63270437 Msa0781030:intron 45.0%
CTTTGTCAGGAGGCTAATAC+CGG + chr5_2:63270469-63270488 Msa0781030:intron 45.0%
!!! ACCGGCATTTTGGTTACAGA+TGG + chr5_2:63270487-63270506 Msa0781030:intron 45.0%
CCCATCTGTAACCAAAATGC+CGG - chr5_2:63270491-63270510 None:intergenic 45.0%
!!! CCGGCATTTTGGTTACAGAT+GGG + chr5_2:63270488-63270507 Msa0781030:intron 45.0%
!! GAGGCATATGCTACTTTGGA+AGG + chr5_2:63270541-63270560 Msa0781030:CDS 45.0%
!!! CAGCTTTTTTGCAGCTCTTG+TGG + chr5_2:63270803-63270822 Msa0781030:CDS 45.0%
! TTTTGTTGAGGGGTCCTGTA+TGG - chr5_2:63270995-63271014 None:intergenic 45.0%
!! TCGGGATATTATTTTGCGGC+TGG + chr5_2:63271201-63271220 Msa0781030:intron 45.0%
TGCGTGATGAAGTTACTGCA+TGG + chr5_2:63271287-63271306 Msa0781030:intron 45.0%
TGCATGGAATCTGTTTCCAG+CGG + chr5_2:63271303-63271322 Msa0781030:intron 45.0%
GTATACTCATTGGAGCTGCT+TGG - chr5_2:63271489-63271508 None:intergenic 45.0%
CGCACTCTCATTTGTTTACC+AGG + chr5_2:63271516-63271535 Msa0781030:CDS 45.0%
! GGTGTTATCCTAGGAACTGT+TGG + chr5_2:63271837-63271856 Msa0781030:CDS 45.0%
GATTGTCACCAACAGTTCCT+AGG - chr5_2:63271848-63271867 None:intergenic 45.0%
GTGTTGTCAACTGTGGATAG+TGG + chr5_2:63272319-63272338 Msa0781030:intron 45.0%
! TGTATGGAAGAGGCCTGTTT+TGG - chr5_2:63272655-63272674 None:intergenic 45.0%
GACTTTGCTGGAACATATGG+AGG + chr5_2:63272739-63272758 Msa0781030:CDS 45.0%
TCCTTAACCCTCCAGTTTCT+TGG + chr5_2:63272819-63272838 Msa0781030:intron 45.0%
CCTTAACCCTCCAGTTTCTT+GGG + chr5_2:63272820-63272839 Msa0781030:intron 45.0%
CTTAACCCTCCAGTTTCTTG+GGG + chr5_2:63272821-63272840 Msa0781030:intron 45.0%
!!! CTGATAGTGCTGCTGCTTTT+CGG + chr5_2:63273019-63273038 Msa0781030:intron 45.0%
CTGCAATGTCTTGGTCAGAT+AGG + chr5_2:63273053-63273072 Msa0781030:CDS 45.0%
CTACCTGAAATAGTTCCAGG+AGG + chr5_2:63273103-63273122 Msa0781030:CDS 45.0%
CTTCCTCCTGGAACTATTTC+AGG - chr5_2:63273109-63273128 None:intergenic 45.0%
CTGAAATAGTTCCAGGAGGA+AGG + chr5_2:63273107-63273126 Msa0781030:CDS 45.0%
TTTCCTGGTTGCAGGCACTA+CGG + chr5_2:63268419-63268438 Msa0781030:CDS 50.0%
! CCTGATTCTTGTGTCACTGC+AGG - chr5_2:63269375-63269394 None:intergenic 50.0%
CCTGCAGTGACACAAGAATC+AGG + chr5_2:63269372-63269391 Msa0781030:CDS 50.0%
GAAATCCTGCAGGTTGTGAC+AGG + chr5_2:63269566-63269585 Msa0781030:intron 50.0%
AACACGGCTTCATCAGAGCT+CGG + chr5_2:63270153-63270172 Msa0781030:intron 50.0%
! AGGCAATCAGAAGGGCGTAA+TGG - chr5_2:63270353-63270372 None:intergenic 50.0%
! GGAGGCTAATACCGGCATTT+TGG + chr5_2:63270477-63270496 Msa0781030:intron 50.0%
CTGACACAGTGACACTGACA+CGG + chr5_2:63270617-63270636 Msa0781030:intron 50.0%
CATTGGAGCTGCTTGGAAGT+TGG - chr5_2:63271482-63271501 None:intergenic 50.0%
ATACCACTGTGGTCTACGGA+CGG + chr5_2:63272440-63272459 Msa0781030:intron 50.0%
ATCTCCCAACAGGCCAAAAC+AGG + chr5_2:63272639-63272658 Msa0781030:CDS 50.0%
CCCAAGAAACTGGAGGGTTA+AGG - chr5_2:63272823-63272842 None:intergenic 50.0%
TCCTTCCCCAAGAAACTGGA+GGG - chr5_2:63272829-63272848 None:intergenic 50.0%
AGACGAACTCCGGATTCTCA+GGG - chr5_2:63272854-63272873 None:intergenic 50.0%
TCTGACCAAGACATTGCAGC+TGG - chr5_2:63273052-63273071 None:intergenic 50.0%
AGTAGGGTTATCCTTCCTCC+TGG - chr5_2:63273121-63273140 None:intergenic 50.0%
AAACCGTAGTGCCTGCAACC+AGG - chr5_2:63268425-63268444 None:intergenic 55.0%
GCAAACCTGTCACAACCTGC+AGG - chr5_2:63269574-63269593 None:intergenic 55.0%
ACCATGTGTGATCTCGGCTC+TGG + chr5_2:63269617-63269636 Msa0781030:CDS 55.0%
! ATGTGTGATCTCGGCTCTGG+CGG + chr5_2:63269620-63269639 Msa0781030:CDS 55.0%
TGACACTGACACGGAGACAC+CGG + chr5_2:63270626-63270645 Msa0781030:intron 55.0%
ATACCGTCCGTAGACCACAG+TGG - chr5_2:63272446-63272465 None:intergenic 55.0%
!!! GAGGCCTGTTTTGGCCTGTT+GGG - chr5_2:63272646-63272665 None:intergenic 55.0%
!!! AGAGGCCTGTTTTGGCCTGT+TGG - chr5_2:63272647-63272666 None:intergenic 55.0%
ACCCTCCAGTTTCTTGGGGA+AGG + chr5_2:63272825-63272844 Msa0781030:intron 55.0%
CTCCTTCCCCAAGAAACTGG+AGG - chr5_2:63272830-63272849 None:intergenic 55.0%
CTCCAGTTTCTTGGGGAAGG+AGG + chr5_2:63272828-63272847 Msa0781030:intron 55.0%
CAGACGAACTCCGGATTCTC+AGG - chr5_2:63272855-63272874 None:intergenic 55.0%
GCCAGAGCCGAGATCACACA+TGG - chr5_2:63269621-63269640 None:intergenic 60.0%
! CGGCTCTGGCGGTGTATCAT+TGG + chr5_2:63269631-63269650 Msa0781030:CDS 60.0%
GGCCTCCTTCCCCAAGAAAC+TGG - chr5_2:63272833-63272852 None:intergenic 60.0%
GGAAGGAGGCCCTGAGAATC+CGG + chr5_2:63272842-63272861 Msa0781030:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 63267901 63273424 63267901 ID=Msa0781030;Name=Msa0781030
chr5_2 mRNA 63267901 63273424 63267901 ID=Msa0781030-mRNA-1;Parent=Msa0781030;Name=Msa0781030-mRNA-1;_AED=0.22;_eAED=0.22;_QI=52|0.85|0.93|0.93|1|1|15|217|505
chr5_2 exon 63267901 63268265 63267901 ID=Msa0781030-mRNA-1:exon:18818;Parent=Msa0781030-mRNA-1
chr5_2 exon 63268400 63268440 63268400 ID=Msa0781030-mRNA-1:exon:18819;Parent=Msa0781030-mRNA-1
chr5_2 exon 63269348 63269440 63269348 ID=Msa0781030-mRNA-1:exon:18820;Parent=Msa0781030-mRNA-1
chr5_2 exon 63269578 63269652 63269578 ID=Msa0781030-mRNA-1:exon:18821;Parent=Msa0781030-mRNA-1
chr5_2 exon 63270036 63270085 63270036 ID=Msa0781030-mRNA-1:exon:18822;Parent=Msa0781030-mRNA-1
chr5_2 exon 63270332 63270421 63270332 ID=Msa0781030-mRNA-1:exon:18823;Parent=Msa0781030-mRNA-1
chr5_2 exon 63270506 63270562 63270506 ID=Msa0781030-mRNA-1:exon:18824;Parent=Msa0781030-mRNA-1
chr5_2 exon 63270755 63270824 63270755 ID=Msa0781030-mRNA-1:exon:18825;Parent=Msa0781030-mRNA-1
chr5_2 exon 63271436 63271537 63271436 ID=Msa0781030-mRNA-1:exon:18826;Parent=Msa0781030-mRNA-1
chr5_2 exon 63271612 63271664 63271612 ID=Msa0781030-mRNA-1:exon:18827;Parent=Msa0781030-mRNA-1
chr5_2 exon 63271782 63271920 63271782 ID=Msa0781030-mRNA-1:exon:18828;Parent=Msa0781030-mRNA-1
chr5_2 exon 63272021 63272105 63272021 ID=Msa0781030-mRNA-1:exon:18829;Parent=Msa0781030-mRNA-1
chr5_2 exon 63272633 63272760 63272633 ID=Msa0781030-mRNA-1:exon:18830;Parent=Msa0781030-mRNA-1
chr5_2 exon 63272834 63272873 63272834 ID=Msa0781030-mRNA-1:exon:18831;Parent=Msa0781030-mRNA-1
chr5_2 exon 63273026 63273424 63273026 ID=Msa0781030-mRNA-1:exon:18832;Parent=Msa0781030-mRNA-1
chr5_2 five_prime_UTR 63267901 63267952 63267901 ID=Msa0781030-mRNA-1:five_prime_utr;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63267953 63268265 63267953 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63268400 63268440 63268400 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63269348 63269440 63269348 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63269578 63269652 63269578 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63270036 63270085 63270036 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63270332 63270421 63270332 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63270506 63270562 63270506 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63270755 63270824 63270755 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63271436 63271537 63271436 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63271612 63271664 63271612 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63271782 63271920 63271782 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63272021 63272105 63272021 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63272633 63272760 63272633 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63272834 63272873 63272834 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 CDS 63273026 63273207 63273026 ID=Msa0781030-mRNA-1:cds;Parent=Msa0781030-mRNA-1
chr5_2 three_prime_UTR 63273208 63273424 63273208 ID=Msa0781030-mRNA-1:three_prime_utr;Parent=Msa0781030-mRNA-1
Gene Sequence

>Msa0781030

ATGGTTATGTTGTTGTCTTGTTCTTCTCTTTCACCATTCTTCCATATTCCAAATTTTTTGATCAAACCAAGGAAGACACAACTACTATGTAAGGATCATTTATTTCATCAAACTACACTTCAATCCTCTTCTTTGTATCTTCCTTCTTCTATGAATAGAAAAAACCTTCACAAATGTTTCTCACAACAAGAACAATCTCAATCTATCCAAGAAGAAAAGAATGATGAAGAACAAGAACAAGAACAACTACATGCATTTCAATTTGAGCGTTTGTTTTCAAACCTTAATCAAGCCACTTTAAAGAGAGAACCTGGAAGCTTATCTAGTGCAATTTTCCTGGTTGCAGGCACTACGGTAGGTGCAGGGATACTTGCAATTCCTGCAGTGACACAAGAATCAGGCTTTTTAGCATCAACAGTTACTTGCATTCTTTGTTGGGCATTCATGGTTGTGACAGGTTTGCTCGTTGCAGAAGTAAATGTCAACACCATGTGTGATCTCGGCTCTGGCGGTGTATCATTGGTATCAATGGCCAGAAGAACTTTAGGGACAGTAGGAGTTCAAATTTCATGTTGGTCATACATCTTCATCCATTACGCCCTTCTGATTGCCTATATAGCTCGTTCTTCAGATATCTTGACGAATTTTCTTGGCATTCCCATATGGGAAAGTGCAACTTTGTTTTCATTGATTTTTGGAGGCATATGCTACTTTGGAAGCCAGCGCTTTATTGGTGCAATTAATGGGGTTCTAGTAGTTGGAATCATCAGCTTTTTTGCAGCTCTTGTGACAGTTGCAAGTGGAAACCTGCATTTTGATGCTCTTTTAAAAGCCAACTTCCAAGCAGCTCCAATGAGTATACCGATTATCGCACTCTCATTTGTTTACCAGAATGTAGTACCTGTTCTTTGTACAAATCTTGAAGGAGACTTGTTAAAAGTAAGGAGTGCAATAATACTAGGCACTGGTATACCGCTTATTCTGTTCCTAGTTTGGAATGGTGTTATCCTAGGAACTGTTGGTGACAATCCAATGGGATTAGATCCATTACAACAGTTGAGATCTTCAAATGGAACAATTGGACCTATAGTTGAGATCTTCTCACTGCTTGCAATTGCTACATCTTACATTGGATTTGTTTTGGGTTTGACAGACTTCCTTGCAGACTTGTTAAATCTCCCAACAGGCCAAAACAGGCCTCTTCCATACATACTGACTTTAGTTCCACCACTTATACTCTCATTATTGGACCCTGAAATATTTTTAAAGCCTTGGACTTTGCTGGAACATATGGAGTTTCTTGGGGAAGGAGGCCCTGAGAATCCGGAGTTCGTCTTGCTGCTGCTTTTCGGAGTTATTCCAGCTGCAATGTCTTGGTCAGATAGGAACTCAAATTCAACTTCATCTGTGAAACTACCTGAAATAGTTCCAGGAGGAAGGATAACCCTACTAATGGTTCTTGGTTGTTCAGGATATGTTATTCTTTCTGAATTATTTGAGAACTTGCAGCACCTTTGA

Protein sequence

>Msa0781030

MVMLLSCSSLSPFFHIPNFLIKPRKTQLLCKDHLFHQTTLQSSSLYLPSSMNRKNLHKCFSQQEQSQSIQEEKNDEEQEQEQLHAFQFERLFSNLNQATLKREPGSLSSAIFLVAGTTVGAGILAIPAVTQESGFLASTVTCILCWAFMVVTGLLVAEVNVNTMCDLGSGGVSLVSMARRTLGTVGVQISCWSYIFIHYALLIAYIARSSDILTNFLGIPIWESATLFSLIFGGICYFGSQRFIGAINGVLVVGIISFFAALVTVASGNLHFDALLKANFQAAPMSIPIIALSFVYQNVVPVLCTNLEGDLLKVRSAIILGTGIPLILFLVWNGVILGTVGDNPMGLDPLQQLRSSNGTIGPIVEIFSLLAIATSYIGFVLGLTDFLADLLNLPTGQNRPLPYILTLVPPLILSLLDPEIFLKPWTLLEHMEFLGEGGPENPEFVLLLLFGVIPAAMSWSDRNSNSTSSVKLPEIVPGGRITLLMVLGCSGYVILSELFENLQHL*