Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602490 | XP_003606505.2 | 98.659 | 820 | 11 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1679 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602490 | sp|Q8RWZ7|VHAA1_ARATH | 79.121 | 819 | 165 | 3 | 1 | 815 | 1 | 817 | 0.0 | 1341 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0602490 | Msa0643440 | 0.809127 | 2.206677e-50 | -8.615850e-47 |
Msa0602490 | Msa1315130 | 0.809207 | 2.121299e-50 | -8.615850e-47 |
Msa0602490 | Msa1315160 | 0.807018 | 6.205209e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602490 | MtrunA17_Chr4g0030121 | 98.659 | 820 | 11 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1679 |
Msa0602490 | MtrunA17_Chr2g0325991 | 85.871 | 821 | 112 | 2 | 1 | 820 | 1 | 818 | 0.0 | 1479 |
Msa0602490 | MtrunA17_Chr4g0035561 | 62.392 | 811 | 302 | 2 | 9 | 819 | 12 | 819 | 0.0 | 1055 |
Msa0602490 | MtrunA17_Chr3g0142161 | 58.783 | 723 | 280 | 3 | 11 | 732 | 1 | 706 | 0.0 | 874 |
Msa0602490 | MtrunA17_Chr3g0142151 | 71.264 | 87 | 25 | 0 | 733 | 819 | 3 | 89 | 3.72e-32 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602490 | AT2G28520.1 | 79.121 | 819 | 165 | 3 | 1 | 815 | 1 | 817 | 0.0 | 1341 |
Msa0602490 | AT4G39080.1 | 63.300 | 812 | 291 | 5 | 11 | 819 | 14 | 821 | 0.0 | 1066 |
Msa0602490 | AT2G21410.1 | 61.776 | 811 | 304 | 5 | 11 | 819 | 15 | 821 | 0.0 | 1060 |
Find 208 sgRNAs with CRISPR-Local
Find 731 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTGTCTCCCTTGGTTTA+TGG | 0.139820 | 4_2:+46198434 | Msa0602490:three_prime_UTR |
CATTCCATTGAGTTTGTTCT+TGG | 0.178560 | 4_2:+46196463 | Msa0602490:CDS |
TGAAGTTTCTTTAATATAAA+AGG | 0.184942 | 4_2:-46195928 | None:intergenic |
ATCTTCGACTTTGGGCATTA+AGG | 0.218922 | 4_2:+46196509 | Msa0602490:CDS |
AGCTTTATGGAGATGTTATT+TGG | 0.240092 | 4_2:+46194058 | Msa0602490:CDS |
ATAATTTGTGGGAACCAATT+TGG | 0.243283 | 4_2:+46198505 | Msa0602490:three_prime_UTR |
GCATCTACAATTTCTTGATA+TGG | 0.247157 | 4_2:-46193314 | None:intergenic |
ATGAAGATGTCCATTCTATT+TGG | 0.261369 | 4_2:+46195419 | Msa0602490:CDS |
CCAGCGACTAGGAAGCTTTA+TGG | 0.261951 | 4_2:+46194045 | Msa0602490:intron |
TTGACTGAGCAACAAAATTC+TGG | 0.265269 | 4_2:+46198571 | Msa0602490:three_prime_UTR |
TATTTCAATGCTCGTTTCTT+TGG | 0.281066 | 4_2:+46195476 | Msa0602490:CDS |
ATCGCGCCTTGCTGACTTAG+AGG | 0.286780 | 4_2:+46192719 | Msa0602490:CDS |
TTCATGCCCTGCGTCTTCAC+TGG | 0.297238 | 4_2:+46198322 | Msa0602490:CDS |
TTGGCAGCTCACTGGATATA+AGG | 0.301774 | 4_2:+46195495 | Msa0602490:CDS |
CAGCATCATATCTTCGACTT+TGG | 0.306552 | 4_2:+46196500 | Msa0602490:CDS |
AAAACCATCTCAGTTGAAAT+AGG | 0.314216 | 4_2:-46191704 | None:intergenic |
AGATTTCAAGGACGCAATTA+TGG | 0.322855 | 4_2:+46196337 | Msa0602490:CDS |
TCCATCATAGTGTAGCTATT+TGG | 0.323153 | 4_2:+46198747 | Msa0602490:three_prime_UTR |
TTGAAAATTTGTGAAGCTTT+TGG | 0.324071 | 4_2:+46191899 | Msa0602490:CDS |
TTGGTGAGAATGAGTTGTTC+TGG | 0.332655 | 4_2:+46195746 | Msa0602490:CDS |
TTCTTTAATATAAAAGGCTT+TGG | 0.332992 | 4_2:-46195922 | None:intergenic |
CACCGAATCATCACCTATTT+AGG | 0.336677 | 4_2:+46187333 | Msa0602490:CDS |
TGGGATTAGGCATCGGAATA+AGG | 0.347557 | 4_2:+46192755 | Msa0602490:CDS |
TTAAGCCCCTTTGACAATCT+TGG | 0.349079 | 4_2:+46195727 | Msa0602490:CDS |
TAGGAGGTCATTTAGCAAAA+TGG | 0.353163 | 4_2:+46192790 | Msa0602490:CDS |
TTACTTATATCTTCAGGAAC+AGG | 0.356092 | 4_2:-46191935 | None:intergenic |
CTTTATTGACCTGATCCATT+AGG | 0.359465 | 4_2:-46190654 | None:intergenic |
CCTTTCAAACCTGAGAACTT+TGG | 0.360456 | 4_2:-46191612 | None:intergenic |
CTTTGTTTACTTATATCTTC+AGG | 0.370890 | 4_2:-46191941 | None:intergenic |
AGCATCATATCTTCGACTTT+GGG | 0.372911 | 4_2:+46196501 | Msa0602490:CDS |
TTGCCTGCTGCTTGGAGCAT+TGG | 0.373696 | 4_2:+46193582 | Msa0602490:CDS |
ACCGGCTGATGAGCAAATTA+TGG | 0.379432 | 4_2:+46191679 | Msa0602490:CDS |
GAAAGTCCTGCTACTAGCTT+GGG | 0.380018 | 4_2:+46196652 | Msa0602490:CDS |
CAACTTTGGATGCTGGGATT+AGG | 0.380654 | 4_2:+46192742 | Msa0602490:CDS |
ATTGATAAATTTGTCTCCCT+TGG | 0.386275 | 4_2:+46198427 | Msa0602490:exon |
ACCATACTTGGAGTGGCCTT+TGG | 0.387768 | 4_2:-46195771 | None:intergenic |
CAGCTGGGATCCACACCAAA+TGG | 0.388952 | 4_2:-46195353 | None:intergenic |
GCTTGTTCATTTCTCTCCTA+AGG | 0.391719 | 4_2:+46198897 | Msa0602490:three_prime_UTR |
TGCTGACTTAGAGGCAACTT+TGG | 0.394715 | 4_2:+46192728 | Msa0602490:CDS |
TGCGGTGATGTTTGGCGACT+GGG | 0.396749 | 4_2:+46193549 | Msa0602490:CDS |
GCTAAATATGATTAGACCTT+AGG | 0.396885 | 4_2:-46198913 | None:intergenic |
TGTAAATCATTATATGATAA+AGG | 0.396986 | 4_2:-46195699 | None:intergenic |
TTGCGGTGATGTTTGGCGAC+TGG | 0.401761 | 4_2:+46193548 | Msa0602490:CDS |
CCTGGTTAACAAATGTTCTC+TGG | 0.402153 | 4_2:-46189151 | None:intergenic |
GTTAAGGTGGCAAAGGAAAA+AGG | 0.402739 | 4_2:-46198393 | None:intergenic |
CATGGAATTTGCCTGCTGCT+TGG | 0.408029 | 4_2:+46193574 | Msa0602490:CDS |
AATAATTAATAACCGTTTGA+AGG | 0.410169 | 4_2:-46187173 | None:intergenic |
CCCTTCTCATTGTTGTCAAG+TGG | 0.418217 | 4_2:+46195656 | Msa0602490:CDS |
AAGACCGAGTTGGCCTAAAT+AGG | 0.420717 | 4_2:-46187346 | None:intergenic |
AAGAAAGCTACGGTTCCTAA+TGG | 0.421538 | 4_2:+46190639 | Msa0602490:CDS |
TTATAAATCTTAAACCAGAT+TGG | 0.422718 | 4_2:-46191571 | None:intergenic |
TTTGTACAGGAAACGATGCC+TGG | 0.425553 | 4_2:+46191533 | Msa0602490:intron |
GTTCAAAATTGTTCTGCAAA+AGG | 0.425950 | 4_2:+46190953 | Msa0602490:CDS |
TTTGTAAATCCAAAGTTCTC+AGG | 0.426855 | 4_2:+46191603 | Msa0602490:CDS |
CAAGTGGTGTACTGGCTCTC+AGG | 0.427335 | 4_2:+46195672 | Msa0602490:CDS |
TGATGTTGCCTGGCAGAATC+CGG | 0.430191 | 4_2:-46196397 | None:intergenic |
ATTGTTGTCAAGTGGTGTAC+TGG | 0.431280 | 4_2:+46195664 | Msa0602490:CDS |
AATCTACAATGAATTCTTCT+CGG | 0.431483 | 4_2:+46194132 | Msa0602490:CDS |
TGAACGACTTCCACGCCAGC+TGG | 0.432096 | 4_2:-46195369 | None:intergenic |
CAATCTTATCATTCGGTTAG+TGG | 0.435860 | 4_2:+46198233 | Msa0602490:CDS |
ATAATAGTTGTGTAAACTGC+TGG | 0.436616 | 4_2:-46193511 | None:intergenic |
TCATGCCCTGCGTCTTCACT+GGG | 0.437229 | 4_2:+46198323 | Msa0602490:CDS |
GTTTGAAGGGTGGTTAGTTA+CGG | 0.438617 | 4_2:-46187159 | None:intergenic |
TGGTGAGAATGAGTTGTTCT+GGG | 0.439666 | 4_2:+46195747 | Msa0602490:CDS |
ACTCAATGGAATGAATCATT+TGG | 0.440403 | 4_2:-46196453 | None:intergenic |
AGCGGATCTTGAGGTTGAAC+CGG | 0.441981 | 4_2:+46196378 | Msa0602490:CDS |
CCATCAAAATCTAACCAATC+TGG | 0.443170 | 4_2:+46191557 | Msa0602490:CDS |
ATGATATTATAGAGATTTCA+AGG | 0.443554 | 4_2:+46196325 | Msa0602490:intron |
TGAAAGGAAGCTCAGCAATC+AGG | 0.445908 | 4_2:+46193618 | Msa0602490:CDS |
CCTTCATTCAATGGATGCAC+TGG | 0.450088 | 4_2:+46193250 | Msa0602490:CDS |
ATGGATCAGGTCAATAAAGC+TGG | 0.450542 | 4_2:+46190658 | Msa0602490:CDS |
AATCTTATCATTCGGTTAGT+GGG | 0.451403 | 4_2:+46198234 | Msa0602490:CDS |
ATATCAAGCTGCACAACATC+AGG | 0.452449 | 4_2:-46198548 | None:intergenic |
TGGCTCTAATTGCAGTTCCA+TGG | 0.455979 | 4_2:+46195890 | Msa0602490:CDS |
ATGTTTGGCGACTGGGGTCA+TGG | 0.458466 | 4_2:+46193556 | Msa0602490:CDS |
CCAGAGAACATTTGTTAACC+AGG | 0.459096 | 4_2:+46189151 | Msa0602490:CDS |
TAGAGGCAACTTTGGATGCT+GGG | 0.459606 | 4_2:+46192736 | Msa0602490:CDS |
GACGTCCATAGCCACCAAAT+TGG | 0.470480 | 4_2:-46198519 | None:intergenic |
GATACCCAAATAGACTGTTA+AGG | 0.471115 | 4_2:-46195630 | None:intergenic |
CTGGTTTAAGATTTATAAGC+GGG | 0.472941 | 4_2:+46191576 | Msa0602490:CDS |
TTCTCACCAAGATTGTCAAA+GGG | 0.473262 | 4_2:-46195733 | None:intergenic |
TACAGAGAACCATACCCATT+TGG | 0.473631 | 4_2:+46195338 | Msa0602490:CDS |
CTTACAAGGATATAAAAGAA+TGG | 0.473868 | 4_2:-46198853 | None:intergenic |
AAATTCCTCTTGATGTTGCC+TGG | 0.474217 | 4_2:-46196407 | None:intergenic |
TTTCAAAATTAAACCTTACA+AGG | 0.477739 | 4_2:-46198867 | None:intergenic |
CAAGAAATTGTAGATGCATA+CGG | 0.479666 | 4_2:+46193320 | Msa0602490:CDS |
ATTAAAGAAACTTCATAATG+AGG | 0.480131 | 4_2:+46195936 | Msa0602490:CDS |
GGTACGACAATCTTATCATT+CGG | 0.480681 | 4_2:+46198226 | Msa0602490:intron |
ATTAGGGATGCACATACTAC+TGG | 0.480874 | 4_2:+46195305 | Msa0602490:intron |
GGCTTTGGAAAGAGCATCCA+TGG | 0.483435 | 4_2:-46195907 | None:intergenic |
TTAGAGGCAACTTTGGATGC+TGG | 0.483664 | 4_2:+46192735 | Msa0602490:CDS |
AGAAAGTCCTGCTACTAGCT+TGG | 0.483862 | 4_2:+46196651 | Msa0602490:CDS |
CAGTTCTCTCTCTTCTGAAA+CGG | 0.484945 | 4_2:-46191342 | None:intergenic |
TTGAACGAATGTCATCTTCT+CGG | 0.485629 | 4_2:-46187286 | None:intergenic |
CCAGTGCATCCATTGAATGA+AGG | 0.486632 | 4_2:-46193250 | None:intergenic |
GGCCTAAATAGGTGATGATT+CGG | 0.486922 | 4_2:-46187335 | None:intergenic |
AAACAGAAAACGATAATTTG+TGG | 0.493419 | 4_2:+46198493 | Msa0602490:three_prime_UTR |
ATCTTGAGAGAGTTTAGAAA+GGG | 0.494160 | 4_2:-46195398 | None:intergenic |
CCAAAGTTCTCAGGTTTGAA+AGG | 0.494490 | 4_2:+46191612 | Msa0602490:CDS |
AATAAATTCTACCACGGTGA+TGG | 0.495855 | 4_2:+46198357 | Msa0602490:CDS |
CTTGCAATCAGATACATACT+TGG | 0.497578 | 4_2:+46190702 | Msa0602490:CDS |
TCCGATATTTGCAAAAGCAC+AGG | 0.497930 | 4_2:+46193043 | Msa0602490:CDS |
TATCTGATTGCAAGACAGAA+TGG | 0.498874 | 4_2:-46190693 | None:intergenic |
TTACAAGGATATAAAAGAAT+GGG | 0.499200 | 4_2:-46198852 | None:intergenic |
CGTTTCAGAAGAGAGAGAAC+TGG | 0.499370 | 4_2:+46191343 | Msa0602490:CDS |
TTGGTACAAACAATGTAGCT+TGG | 0.501283 | 4_2:+46198766 | Msa0602490:three_prime_UTR |
GGATCCTATTTCAACTGAGA+TGG | 0.501291 | 4_2:+46191700 | Msa0602490:CDS |
GCTACGGTTCCTAATGGATC+AGG | 0.503423 | 4_2:+46190645 | Msa0602490:CDS |
ACCAAATAGCTACACTATGA+TGG | 0.506451 | 4_2:-46198748 | None:intergenic |
AACAGAAAACGATAATTTGT+GGG | 0.507424 | 4_2:+46198494 | Msa0602490:three_prime_UTR |
GGGAACCAATTTGGTGGCTA+TGG | 0.509683 | 4_2:+46198514 | Msa0602490:three_prime_UTR |
CATCTTGAGAGAGTTTAGAA+AGG | 0.509747 | 4_2:-46195399 | None:intergenic |
TCGTTTCTTTGGCAGCTCAC+TGG | 0.510044 | 4_2:+46195487 | Msa0602490:CDS |
GACGCACCAAATATGTGAAA+AGG | 0.511111 | 4_2:-46194157 | None:intergenic |
CATTTGGTGTGGATCCCAGC+TGG | 0.512737 | 4_2:+46195354 | Msa0602490:CDS |
GAACCAATGCTCCAAGCAGC+AGG | 0.514977 | 4_2:-46193585 | None:intergenic |
ATTCGGTGAGCGGACTCAGC+GGG | 0.515932 | 4_2:-46187318 | None:intergenic |
AGGTTGAACCGGATTCTGCC+AGG | 0.519264 | 4_2:+46196389 | Msa0602490:CDS |
TTATGGAGATGTTATTTGGT+GGG | 0.523066 | 4_2:+46194062 | Msa0602490:CDS |
ATGTACCACACCAAATAGAA+TGG | 0.523321 | 4_2:-46195429 | None:intergenic |
TAACAAATGTTCTCTGGAAG+GGG | 0.525703 | 4_2:-46189145 | None:intergenic |
ATTAATAACCGTTTGAAGGG+TGG | 0.527184 | 4_2:-46187169 | None:intergenic |
ATAATTAATAACCGTTTGAA+GGG | 0.537460 | 4_2:-46187172 | None:intergenic |
TACATACTTGGAGGATATAG+AGG | 0.538894 | 4_2:+46190714 | Msa0602490:CDS |
ATTCTCACCAAGATTGTCAA+AGG | 0.538979 | 4_2:-46195734 | None:intergenic |
AGCTGGGATCCACACCAAAT+GGG | 0.540431 | 4_2:-46195352 | None:intergenic |
TGGTGTGGTACATATGAACT+TGG | 0.541184 | 4_2:+46195439 | Msa0602490:CDS |
TTAACAAATGTTCTCTGGAA+GGG | 0.543625 | 4_2:-46189146 | None:intergenic |
TCCATAATTTGCTCATCAGC+CGG | 0.544690 | 4_2:-46191680 | None:intergenic |
ATATGGATTTGTGAAACTGT+TGG | 0.545071 | 4_2:-46193297 | None:intergenic |
AGAACCAAGAACAAACTCAA+TGG | 0.546516 | 4_2:-46196467 | None:intergenic |
ATTTGTGGGAACCAATTTGG+TGG | 0.550216 | 4_2:+46198508 | Msa0602490:three_prime_UTR |
GCAATCAGATACATACTTGG+AGG | 0.551244 | 4_2:+46190705 | Msa0602490:CDS |
ATGTCACACCAGCATAGCCA+TGG | 0.554048 | 4_2:-46198603 | None:intergenic |
CTGTTGGTTCTAAAATATGT+AGG | 0.554704 | 4_2:-46193281 | None:intergenic |
GTAACTAACCACCCTTCAAA+CGG | 0.557815 | 4_2:+46187161 | Msa0602490:five_prime_UTR |
TACTTATATCTTCAGGAACA+GGG | 0.558496 | 4_2:-46191934 | None:intergenic |
GGATCCACACCAAATGGGTA+TGG | 0.561377 | 4_2:-46195347 | None:intergenic |
AATAAGGCTCTATCTTCTGT+AGG | 0.561847 | 4_2:+46192771 | Msa0602490:CDS |
GACACCTGCATGAACTATCT+CGG | 0.562857 | 4_2:-46194192 | None:intergenic |
TTTGACAGCAATTCTCAAGT+GGG | 0.564303 | 4_2:+46193221 | Msa0602490:CDS |
ATGAGTTGTTCTGGGGCCAA+AGG | 0.565727 | 4_2:+46195755 | Msa0602490:CDS |
CCACTTGACAACAATGAGAA+GGG | 0.565912 | 4_2:-46195656 | None:intergenic |
GTAAACAAAGGCAAATAACC+CGG | 0.566335 | 4_2:+46191954 | Msa0602490:CDS |
TACCTCTGAAGCGGATCTTG+AGG | 0.567052 | 4_2:+46196369 | Msa0602490:CDS |
AAGAAATTGTAGATGCATAC+GGG | 0.568650 | 4_2:+46193321 | Msa0602490:CDS |
GTTAACAAATGTTCTCTGGA+AGG | 0.571175 | 4_2:-46189147 | None:intergenic |
ATCTGATTGCAAGACAGAAT+GGG | 0.571405 | 4_2:-46190692 | None:intergenic |
ATCACCTATTTAGGCCAACT+CGG | 0.571758 | 4_2:+46187342 | Msa0602490:CDS |
TTTATGGAGATGTTATTTGG+TGG | 0.575690 | 4_2:+46194061 | Msa0602490:CDS |
TATGATTTCTGCCAGCGACT+AGG | 0.579385 | 4_2:+46194034 | Msa0602490:intron |
TGGATGCTGGGATTAGGCAT+CGG | 0.580692 | 4_2:+46192748 | Msa0602490:CDS |
TGGTTCTTATAGCACATGAA+AGG | 0.580897 | 4_2:+46193602 | Msa0602490:CDS |
GAAAAGCATATTGCCTCTTG+TGG | 0.583078 | 4_2:-46191648 | None:intergenic |
TTCTGCCAGGCAACATCAAG+AGG | 0.583954 | 4_2:+46196402 | Msa0602490:CDS |
GAACGACTTCCACGCCAGCT+GGG | 0.584129 | 4_2:-46195368 | None:intergenic |
TGGATCAGGTCAATAAAGCT+GGG | 0.585348 | 4_2:+46190659 | Msa0602490:CDS |
ATCCTCGGTTAAGGTGGCAA+AGG | 0.586241 | 4_2:-46198400 | None:intergenic |
TTGACAGCAATTCTCAAGTG+GGG | 0.586879 | 4_2:+46193222 | Msa0602490:CDS |
ATCTTATCATTCGGTTAGTG+GGG | 0.588871 | 4_2:+46198235 | Msa0602490:CDS |
CAGATGACATCCACGACAGT+TGG | 0.589699 | 4_2:-46198631 | None:intergenic |
ATAGGTGATGATTCGGTGAG+CGG | 0.591098 | 4_2:-46187328 | None:intergenic |
AACGAAATTCAATTCAACAA+TGG | 0.592712 | 4_2:+46187221 | Msa0602490:exon |
TGAAGGGTGGTTAGTTACGG+AGG | 0.592747 | 4_2:-46187156 | None:intergenic |
ACCACTTGACAACAATGAGA+AGG | 0.593169 | 4_2:-46195657 | None:intergenic |
TTATGGACAAATATATGCAA+AGG | 0.593509 | 4_2:+46198451 | Msa0602490:three_prime_UTR |
AGGTCATTTAGCAAAATGGA+TGG | 0.593655 | 4_2:+46192794 | Msa0602490:CDS |
GAACGCATGAGATCCATTGA+AGG | 0.595669 | 4_2:-46187264 | None:intergenic |
ATGTTGTTTCGTGCCACAAG+AGG | 0.596841 | 4_2:+46191635 | Msa0602490:CDS |
TTCCTTTGCCACCTTAACCG+AGG | 0.599921 | 4_2:+46198398 | Msa0602490:CDS |
TTCAGAAGAGAGAGAACTGG+AGG | 0.604048 | 4_2:+46191346 | Msa0602490:CDS |
TGACAGCAATTCTCAAGTGG+GGG | 0.606342 | 4_2:+46193223 | Msa0602490:CDS |
GTCCTAGGTAAGAAGAGAGA+AGG | 0.607614 | 4_2:+46192950 | Msa0602490:intron |
AACCTCAAGATCCGCTTCAG+AGG | 0.611912 | 4_2:-46196371 | None:intergenic |
AATGTCTTGTTGGAGAGGGC+TGG | 0.614708 | 4_2:+46193018 | Msa0602490:CDS |
AAGGCTCTATCTTCTGTAGG+AGG | 0.618034 | 4_2:+46192774 | Msa0602490:CDS |
CAGAAATGTCAAGAAAGCTA+CGG | 0.623573 | 4_2:+46190629 | Msa0602490:CDS |
TTTCAAAATAAATTCTACCA+CGG | 0.624068 | 4_2:+46198351 | Msa0602490:CDS |
TTCAACCCAGTGAAGACGCA+GGG | 0.627548 | 4_2:-46198328 | None:intergenic |
GAAATTGAAGAAGACCGAGT+TGG | 0.632332 | 4_2:-46187356 | None:intergenic |
ATTCAACCCAGTGAAGACGC+AGG | 0.632811 | 4_2:-46198329 | None:intergenic |
TATATTTGTCCATAAACCAA+GGG | 0.639674 | 4_2:-46198443 | None:intergenic |
ATATATTTGTCCATAAACCA+AGG | 0.640356 | 4_2:-46198444 | None:intergenic |
CTGAAGATATAAGTAAACAA+AGG | 0.646221 | 4_2:+46191942 | Msa0602490:CDS |
TCTGGTTTAAGATTTATAAG+CGG | 0.646579 | 4_2:+46191575 | Msa0602490:CDS |
TAAACAAAGGCAAATAACCC+GGG | 0.647105 | 4_2:+46191955 | Msa0602490:CDS |
TTTAGCAAAATGGATGGACA+TGG | 0.648626 | 4_2:+46192800 | Msa0602490:CDS |
AAAGTCCTGCTACTAGCTTG+GGG | 0.651364 | 4_2:+46196653 | Msa0602490:CDS |
GCGGTGATGTTTGGCGACTG+GGG | 0.651684 | 4_2:+46193550 | Msa0602490:CDS |
TTGGTTCTAAAATATGTAGG+TGG | 0.652091 | 4_2:-46193278 | None:intergenic |
TGTGCTTAATACCTCTGAAG+CGG | 0.653524 | 4_2:+46196360 | Msa0602490:CDS |
AATGCCGAGATAGTTCATGC+AGG | 0.655608 | 4_2:+46194188 | Msa0602490:CDS |
TGTCACACCAGCATAGCCAT+GGG | 0.658695 | 4_2:-46198602 | None:intergenic |
TCTCACCAAGATTGTCAAAG+GGG | 0.658739 | 4_2:-46195732 | None:intergenic |
GATGTCCATTCTATTTGGTG+TGG | 0.659577 | 4_2:+46195424 | Msa0602490:CDS |
GGTGTGGATCCCAGCTGGCG+TGG | 0.661930 | 4_2:+46195359 | Msa0602490:CDS |
GGTGTGGTACATATGAACTT+GGG | 0.664543 | 4_2:+46195440 | Msa0602490:CDS |
GGTGAGAATGAGTTGTTCTG+GGG | 0.669382 | 4_2:+46195748 | Msa0602490:CDS |
GACATTTCGACCAACTGTCG+TGG | 0.671947 | 4_2:+46198621 | Msa0602490:three_prime_UTR |
AGAGGAATTTAATTTCAGTG+AGG | 0.676594 | 4_2:+46196420 | Msa0602490:CDS |
AGAACCATACCCATTTGGTG+TGG | 0.678548 | 4_2:+46195343 | Msa0602490:CDS |
TTGCGACGAAGAAAGTGAAG+CGG | 0.679941 | 4_2:+46187116 | Msa0602490:five_prime_UTR |
AAGTTGCCTCTAAGTCAGCA+AGG | 0.680382 | 4_2:-46192725 | None:intergenic |
GATTCGGTGAGCGGACTCAG+CGG | 0.691576 | 4_2:-46187319 | None:intergenic |
AAGTCCTGCTACTAGCTTGG+GGG | 0.696904 | 4_2:+46196654 | Msa0602490:CDS |
CTGTTAAGGAAAATCATCTG+CGG | 0.714419 | 4_2:-46195616 | None:intergenic |
ACAAAGGCAAATAACCCGGG+AGG | 0.743957 | 4_2:+46191958 | Msa0602490:CDS |
TGAACTTGTATCCATCACCG+TGG | 0.780160 | 4_2:-46198368 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTCTAAAATTATCAT+CGG | - | chr4_2:46187646-46187665 | None:intergenic | 10.0% |
!!! | TAATTGTATGAAAATATTTT+TGG | - | chr4_2:46189855-46189874 | None:intergenic | 10.0% |
!!! | AATATATTTTAGAGTATTAT+GGG | - | chr4_2:46190446-46190465 | None:intergenic | 10.0% |
!!! | TAATATATTTTAGAGTATTA+TGG | - | chr4_2:46190447-46190466 | None:intergenic | 10.0% |
!! | ATTTAAAAAAATGCATAATT+TGG | + | chr4_2:46191741-46191760 | Msa0602490:intron | 10.0% |
!! | TGAATATTAATTTATGATAA+AGG | - | chr4_2:46192173-46192192 | None:intergenic | 10.0% |
!!! | ATTTGTTTCATTTTTTATTT+AGG | - | chr4_2:46192545-46192564 | None:intergenic | 10.0% |
!! | AAATCAAGTATTTATAAAAT+AGG | - | chr4_2:46196572-46196591 | None:intergenic | 10.0% |
!!! | TATTTTATAAATACTTGATT+TGG | + | chr4_2:46196571-46196590 | Msa0602490:intron | 10.0% |
!!! | AATTATATTTTGTATACTAT+GGG | - | chr4_2:46196776-46196795 | None:intergenic | 10.0% |
!!! | AAATTATATTTTGTATACTA+TGG | - | chr4_2:46196777-46196796 | None:intergenic | 10.0% |
!!! | ACAATTATTTTAATCAATTT+GGG | + | chr4_2:46197888-46197907 | Msa0602490:intron | 10.0% |
!! | AAACAAATACAATTAAATGT+TGG | - | chr4_2:46187770-46187789 | None:intergenic | 15.0% |
!! | GTCTAAATAAATCTAAATAA+TGG | + | chr4_2:46187803-46187822 | Msa0602490:intron | 15.0% |
!! | AAAAAAAAGAAAACGAAATA+TGG | + | chr4_2:46187985-46188004 | Msa0602490:intron | 15.0% |
!!! | ACATACAAATTTTTGAAAAT+AGG | + | chr4_2:46188179-46188198 | Msa0602490:intron | 15.0% |
!! | TAATCAAAAATAACTTAGTA+GGG | - | chr4_2:46188281-46188300 | None:intergenic | 15.0% |
!! | ATAATCAAAAATAACTTAGT+AGG | - | chr4_2:46188282-46188301 | None:intergenic | 15.0% |
!!! | TAAATTCTATTGGTAATTAA+GGG | + | chr4_2:46188559-46188578 | Msa0602490:intron | 15.0% |
!! | TTTAACTAATAAATTGAGTA+AGG | - | chr4_2:46189306-46189325 | None:intergenic | 15.0% |
!! | ATTTATTTAATAATCTCATC+AGG | - | chr4_2:46189781-46189800 | None:intergenic | 15.0% |
!!! | TGATTTGTTTTCTTAAATTA+TGG | - | chr4_2:46190391-46190410 | None:intergenic | 15.0% |
!! | TAATTTAAGAAAACAAATCA+TGG | + | chr4_2:46190391-46190410 | Msa0602490:intron | 15.0% |
!! | TAAAATAAAATCGAAAAACT+AGG | - | chr4_2:46191488-46191507 | None:intergenic | 15.0% |
!!! | ACTATAATAATTTTTTGTAC+AGG | + | chr4_2:46191520-46191539 | Msa0602490:intron | 15.0% |
!!! | TTTCATTTTTTATTTAGGAT+TGG | - | chr4_2:46192540-46192559 | None:intergenic | 15.0% |
!! | TTATAAATCATAGTTTCTAT+TGG | - | chr4_2:46192672-46192691 | None:intergenic | 15.0% |
!! | TTTCAATTTCAAGATATTAA+AGG | - | chr4_2:46193927-46193946 | None:intergenic | 15.0% |
!! | CTTGAAATTGAAATATATTA+TGG | + | chr4_2:46193934-46193953 | Msa0602490:intron | 15.0% |
!!! | GAAATCATATAGAATTTTTA+GGG | - | chr4_2:46194023-46194042 | None:intergenic | 15.0% |
!!! | AGAAATCATATAGAATTTTT+AGG | - | chr4_2:46194024-46194043 | None:intergenic | 15.0% |
!! | ATATTTAACACCAATAATTT+AGG | - | chr4_2:46194460-46194479 | None:intergenic | 15.0% |
!! | ATGTCAACTATATATATAAA+AGG | - | chr4_2:46194485-46194504 | None:intergenic | 15.0% |
!! | TGTAAATCATTATATGATAA+AGG | - | chr4_2:46195702-46195721 | None:intergenic | 15.0% |
!! | TGAAGTTTCTTTAATATAAA+AGG | - | chr4_2:46195931-46195950 | None:intergenic | 15.0% |
!! | TACATGTAATTAAAAAGTTT+CGG | - | chr4_2:46196021-46196040 | None:intergenic | 15.0% |
!! | AAATTAAATACAACTTCAAT+TGG | + | chr4_2:46196183-46196202 | Msa0602490:intron | 15.0% |
!!! | AATTAAATCCTTTTTTAGAT+AGG | + | chr4_2:46197297-46197316 | Msa0602490:intron | 15.0% |
!!! | ATTAAATCCTTTTTTAGATA+GGG | + | chr4_2:46197298-46197317 | Msa0602490:intron | 15.0% |
!!! | GACAATTATTTTAATCAATT+TGG | + | chr4_2:46197887-46197906 | Msa0602490:intron | 15.0% |
!! | AATGATTAAAGATGAAAAAA+TGG | - | chr4_2:46198178-46198197 | None:intergenic | 15.0% |
!!! | TAAGGTTTAATTTTGAAATA+CGG | + | chr4_2:46198872-46198891 | Msa0602490:three_prime_UTR | 15.0% |
!! | ATAATTAATAACCGTTTGAA+GGG | - | chr4_2:46187175-46187194 | None:intergenic | 20.0% |
!! | AATAATTAATAACCGTTTGA+AGG | - | chr4_2:46187176-46187195 | None:intergenic | 20.0% |
!!! | GTAAATTCTATTGGTAATTA+AGG | + | chr4_2:46188558-46188577 | Msa0602490:intron | 20.0% |
!! | ATATAAATATCCCAAATTTC+TGG | + | chr4_2:46188982-46189001 | Msa0602490:intron | 20.0% |
!! | AAAATCTCTAATTTAGATGT+TGG | + | chr4_2:46189039-46189058 | Msa0602490:intron | 20.0% |
!! | TTGATATATAATATGGAGAT+TGG | - | chr4_2:46189383-46189402 | None:intergenic | 20.0% |
!!! | CCATCTTTTGATATATAATA+TGG | - | chr4_2:46189390-46189409 | None:intergenic | 20.0% |
!! | CCATATTATATATCAAAAGA+TGG | + | chr4_2:46189387-46189406 | Msa0602490:intron | 20.0% |
!! | TACTATAGTTAGTATTACAT+TGG | - | chr4_2:46189621-46189640 | None:intergenic | 20.0% |
!! | ATATTGATGTGACAATAAAA+TGG | + | chr4_2:46189723-46189742 | Msa0602490:intron | 20.0% |
!!! | ATCTGACATTTTTTAATTTG+TGG | + | chr4_2:46190828-46190847 | Msa0602490:intron | 20.0% |
!!! | ATGATAACTATTTTCAAACA+GGG | - | chr4_2:46191078-46191097 | None:intergenic | 20.0% |
!! | TTGAATACAATATCAATTGA+TGG | - | chr4_2:46191186-46191205 | None:intergenic | 20.0% |
!! | GTATATTACATTAAAACAGT+AGG | - | chr4_2:46191232-46191251 | None:intergenic | 20.0% |
!! | TACATAAGAATATAGTTGTA+TGG | + | chr4_2:46191274-46191293 | Msa0602490:intron | 20.0% |
!! | ACATAAGAATATAGTTGTAT+GGG | + | chr4_2:46191275-46191294 | Msa0602490:intron | 20.0% |
!! | AAAAATATCAAGGGAAAAAA+GGG | - | chr4_2:46191439-46191458 | None:intergenic | 20.0% |
!! | AAAAAATATCAAGGGAAAAA+AGG | - | chr4_2:46191440-46191459 | None:intergenic | 20.0% |
!! | TCACAGTAAAAAAATATCAA+GGG | - | chr4_2:46191448-46191467 | None:intergenic | 20.0% |
!! | TTCACAGTAAAAAAATATCA+AGG | - | chr4_2:46191449-46191468 | None:intergenic | 20.0% |
!! | AATTATTATAGTGAACTTAG+AGG | - | chr4_2:46191512-46191531 | None:intergenic | 20.0% |
!! | TTATAAATCTTAAACCAGAT+TGG | - | chr4_2:46191574-46191593 | None:intergenic | 20.0% |
!!! | TATCTGTATTTAGTTTGTTT+TGG | + | chr4_2:46191774-46191793 | Msa0602490:intron | 20.0% |
!!! | ATTGTTTTGAACTTTTTTTC+AGG | + | chr4_2:46191820-46191839 | Msa0602490:intron | 20.0% |
!!! | TCTTTAATTGTTTTGTAACA+CGG | + | chr4_2:46192019-46192038 | Msa0602490:intron | 20.0% |
!!! | AGTTTGCAATATCATTTTTT+TGG | + | chr4_2:46192245-46192264 | Msa0602490:intron | 20.0% |
!!! | GTTTGCAATATCATTTTTTT+GGG | + | chr4_2:46192246-46192265 | Msa0602490:intron | 20.0% |
!!! | TTTGCAATATCATTTTTTTG+GGG | + | chr4_2:46192247-46192266 | Msa0602490:intron | 20.0% |
!! | GATTGGTATTCATATAAATT+GGG | - | chr4_2:46192523-46192542 | None:intergenic | 20.0% |
!! | TTGAAAAATATTATGGTTAC+AGG | + | chr4_2:46192692-46192711 | Msa0602490:intron | 20.0% |
!!! | TTTCTTCCTTTTAAATTTTG+AGG | + | chr4_2:46193102-46193121 | Msa0602490:intron | 20.0% |
!! | ATATAAAACAAAAAGACGAA+TGG | - | chr4_2:46193139-46193158 | None:intergenic | 20.0% |
!!! | TATATTTCTAACTTTGTGAA+AGG | - | chr4_2:46193411-46193430 | None:intergenic | 20.0% |
!! | TTCACAAAGTTAGAAATATA+TGG | + | chr4_2:46193411-46193430 | Msa0602490:intron | 20.0% |
!!! | ATTTTGCCAATATATCATAA+TGG | + | chr4_2:46193685-46193704 | Msa0602490:intron | 20.0% |
!!! | TTTTGCCAATATATCATAAT+GGG | + | chr4_2:46193686-46193705 | Msa0602490:intron | 20.0% |
!!! | TTCTTTACAGTCTATAATTT+TGG | + | chr4_2:46194406-46194425 | Msa0602490:intron | 20.0% |
!! | TGGAATAAAAAAAAATCAAC+TGG | - | chr4_2:46194434-46194453 | None:intergenic | 20.0% |
!!! | ATTTCAGTAAATTTTAAGTC+TGG | - | chr4_2:46194884-46194903 | None:intergenic | 20.0% |
!! | TTCTTTAATATAAAAGGCTT+TGG | - | chr4_2:46195925-46195944 | None:intergenic | 20.0% |
!! | ATTAAAGAAACTTCATAATG+AGG | + | chr4_2:46195936-46195955 | Msa0602490:CDS | 20.0% |
!! | TGATCTTAAAATGGATATTA+GGG | - | chr4_2:46196133-46196152 | None:intergenic | 20.0% |
!! | AAAGAAAACTGATCTTAAAA+TGG | - | chr4_2:46196142-46196161 | None:intergenic | 20.0% |
!!! | ATTTTAAGATCAGTTTTCTT+TGG | + | chr4_2:46196141-46196160 | Msa0602490:intron | 20.0% |
!! | ATGATATTATAGAGATTTCA+AGG | + | chr4_2:46196325-46196344 | Msa0602490:intron | 20.0% |
!! | ATTTATAAAATAGGAAACTG+AGG | - | chr4_2:46196563-46196582 | None:intergenic | 20.0% |
!! | ATATAATTTATAGCTGTAGT+TGG | + | chr4_2:46196788-46196807 | Msa0602490:intron | 20.0% |
!! | TATAATTTATAGCTGTAGTT+GGG | + | chr4_2:46196789-46196808 | Msa0602490:intron | 20.0% |
!! | TTAATCTCGTAAAAAATATC+TGG | - | chr4_2:46197115-46197134 | None:intergenic | 20.0% |
!!! | TTAAATCCTTTTTTAGATAG+GGG | + | chr4_2:46197299-46197318 | Msa0602490:intron | 20.0% |
!! | AAGAAAATACATTAACATTG+AGG | - | chr4_2:46197659-46197678 | None:intergenic | 20.0% |
!!! | GAAAATAAGCTTTATAGATT+AGG | + | chr4_2:46197687-46197706 | Msa0602490:intron | 20.0% |
!!! | AAGAAACTGTTTCTTTATAT+AGG | + | chr4_2:46197764-46197783 | Msa0602490:intron | 20.0% |
!!! | AGAAACTGTTTCTTTATATA+GGG | + | chr4_2:46197765-46197784 | Msa0602490:intron | 20.0% |
!! | AATGCTTATATTCATAAAGT+GGG | - | chr4_2:46197990-46198009 | None:intergenic | 20.0% |
!! | AAATGCTTATATTCATAAAG+TGG | - | chr4_2:46197991-46198010 | None:intergenic | 20.0% |
!! | AAAAATCATAGATAAGGTAA+AGG | - | chr4_2:46198150-46198169 | None:intergenic | 20.0% |
!! | GTATTGAAAAATCATAGATA+AGG | - | chr4_2:46198156-46198175 | None:intergenic | 20.0% |
!! | TTTCAAAATAAATTCTACCA+CGG | + | chr4_2:46198351-46198370 | Msa0602490:CDS | 20.0% |
!!! | AATTTATCAATTTTCATCCT+CGG | - | chr4_2:46198418-46198437 | None:intergenic | 20.0% |
!! | TTACAAGGATATAAAAGAAT+GGG | - | chr4_2:46198855-46198874 | None:intergenic | 20.0% |
!! | TTTCAAAATTAAACCTTACA+AGG | - | chr4_2:46198870-46198889 | None:intergenic | 20.0% |
! | AACGAAATTCAATTCAACAA+TGG | + | chr4_2:46187221-46187240 | Msa0602490:exon | 25.0% |
! | TACGAACAACAAACAAAAAA+AGG | - | chr4_2:46187417-46187436 | None:intergenic | 25.0% |
!!! | AATGTTTTTTCAAACCAAAC+CGG | + | chr4_2:46188255-46188274 | Msa0602490:intron | 25.0% |
!! | TAGGTTCAATAGGATAATTT+TGG | + | chr4_2:46188463-46188482 | Msa0602490:intron | 25.0% |
!!! | AACATGATTATTTTGTTTCC+TGG | + | chr4_2:46188487-46188506 | Msa0602490:intron | 25.0% |
!!! | CTGATAATGGTAAATTCTAT+TGG | + | chr4_2:46188549-46188568 | Msa0602490:intron | 25.0% |
!! | TTTGCCAATTTTTACTTATG+TGG | - | chr4_2:46188596-46188615 | None:intergenic | 25.0% |
!! | ACTTCAATGTTTTCTAATCT+CGG | + | chr4_2:46188742-46188761 | Msa0602490:intron | 25.0% |
! | ATCATATTACAATAGTATGC+TGG | + | chr4_2:46188872-46188891 | Msa0602490:intron | 25.0% |
! | TTCCAAAAAGTAAACAAAGA+GGG | - | chr4_2:46189224-46189243 | None:intergenic | 25.0% |
! | ATTCCAAAAAGTAAACAAAG+AGG | - | chr4_2:46189225-46189244 | None:intergenic | 25.0% |
!!! | TCTTTGTTTACTTTTTGGAA+TGG | + | chr4_2:46189224-46189243 | Msa0602490:intron | 25.0% |
! | TATCAAAAGATGGAAGAAAT+AGG | + | chr4_2:46189397-46189416 | Msa0602490:intron | 25.0% |
! | AAGAAATAGGTTCAAACTTT+AGG | + | chr4_2:46189410-46189429 | Msa0602490:intron | 25.0% |
! | TATGGACATTGACAATAATT+AGG | + | chr4_2:46189502-46189521 | Msa0602490:intron | 25.0% |
! | TATAGTTAGTATTACATTGG+TGG | - | chr4_2:46189618-46189637 | None:intergenic | 25.0% |
! | AAGAAATTAGATAGAAGATG+TGG | + | chr4_2:46189659-46189678 | Msa0602490:intron | 25.0% |
!!! | GTTGAATTCTCAGTTTTAAA+GGG | - | chr4_2:46189936-46189955 | None:intergenic | 25.0% |
!!! | AGTTGAATTCTCAGTTTTAA+AGG | - | chr4_2:46189937-46189956 | None:intergenic | 25.0% |
! | GGTACTAATAATTGTTTGAT+AGG | - | chr4_2:46190084-46190103 | None:intergenic | 25.0% |
!!! | GAATTCGAAGTTTTAGTTAT+TGG | - | chr4_2:46190105-46190124 | None:intergenic | 25.0% |
!!! | TGATCTTCAGTGAATTTTTT+TGG | + | chr4_2:46190225-46190244 | Msa0602490:intron | 25.0% |
! | TCATGGAATATAATGAAGTT+TGG | + | chr4_2:46190408-46190427 | Msa0602490:intron | 25.0% |
!! | GCTATAATAACCAGTATTTT+TGG | + | chr4_2:46190514-46190533 | Msa0602490:intron | 25.0% |
! | TATATCTAGTCCAAAAATAC+TGG | - | chr4_2:46190527-46190546 | None:intergenic | 25.0% |
!! | AAACAAAATGCAGTTGATAT+TGG | - | chr4_2:46190587-46190606 | None:intergenic | 25.0% |
! | AAAGAGAAGTAAAATAGAGA+AGG | - | chr4_2:46190741-46190760 | None:intergenic | 25.0% |
! | ATTACAACATATTGAACGAA+AGG | - | chr4_2:46190798-46190817 | None:intergenic | 25.0% |
!! | CATGATAACTATTTTCAAAC+AGG | - | chr4_2:46191079-46191098 | None:intergenic | 25.0% |
!! | TCTGGTTTAAGATTTATAAG+CGG | + | chr4_2:46191575-46191594 | Msa0602490:CDS | 25.0% |
! | AAAACAATGCATAAATTGGT+GGG | - | chr4_2:46191808-46191827 | None:intergenic | 25.0% |
! | GTTCAAAACAATGCATAAAT+TGG | - | chr4_2:46191812-46191831 | None:intergenic | 25.0% |
!! | TTGAAAATTTGTGAAGCTTT+TGG | + | chr4_2:46191899-46191918 | Msa0602490:CDS | 25.0% |
!! | CTTTGTTTACTTATATCTTC+AGG | - | chr4_2:46191944-46191963 | None:intergenic | 25.0% |
! | CTGAAGATATAAGTAAACAA+AGG | + | chr4_2:46191942-46191961 | Msa0602490:CDS | 25.0% |
! | AAACAATTAAAGAGGAAAAC+AGG | - | chr4_2:46192012-46192031 | None:intergenic | 25.0% |
! | GTGTTACAAAACAATTAAAG+AGG | - | chr4_2:46192020-46192039 | None:intergenic | 25.0% |
!!! | CTTTAATTGTTTTGTAACAC+GGG | + | chr4_2:46192020-46192039 | Msa0602490:intron | 25.0% |
!!! | CCTGTTTTTATATTTACCAA+TGG | - | chr4_2:46192385-46192404 | None:intergenic | 25.0% |
! | CCATTGGTAAATATAAAAAC+AGG | + | chr4_2:46192382-46192401 | Msa0602490:intron | 25.0% |
! | CAAAAACCTTATAAATCCTA+CGG | - | chr4_2:46192418-46192437 | None:intergenic | 25.0% |
!! | GGATTGGTATTCATATAAAT+TGG | - | chr4_2:46192524-46192543 | None:intergenic | 25.0% |
! | CCATTGACAATTCTTAATAT+TGG | - | chr4_2:46192593-46192612 | None:intergenic | 25.0% |
! | CCAATATTAAGAATTGTCAA+TGG | + | chr4_2:46192590-46192609 | Msa0602490:intron | 25.0% |
! | AAAGGAAGAAATAATTACTG+AGG | - | chr4_2:46193093-46193112 | None:intergenic | 25.0% |
!! | TATATTCCCATTTCTTTTTG+CGG | + | chr4_2:46193531-46193550 | Msa0602490:CDS | 25.0% |
! | AATGTAGAAAAATGAAAAGC+TGG | - | chr4_2:46193845-46193864 | None:intergenic | 25.0% |
! | TACCTGATAAACACATAATT+TGG | + | chr4_2:46193866-46193885 | Msa0602490:intron | 25.0% |
! | GGACAAAAACTTATTCTAAA+TGG | - | chr4_2:46193906-46193925 | None:intergenic | 25.0% |
!! | TCACTATTTTCAATGTATTG+TGG | + | chr4_2:46194106-46194125 | Msa0602490:CDS | 25.0% |
!! | CACTATTTTCAATGTATTGT+GGG | + | chr4_2:46194107-46194126 | Msa0602490:CDS | 25.0% |
! | AATCTACAATGAATTCTTCT+CGG | + | chr4_2:46194132-46194151 | Msa0602490:CDS | 25.0% |
! | ATGAAAACATCAACAAGTAA+TGG | - | chr4_2:46194266-46194285 | None:intergenic | 25.0% |
! | AATTTGAATCGTTAACTCAT+TGG | - | chr4_2:46194610-46194629 | None:intergenic | 25.0% |
! | ATTTACTGTAATATGCCATA+CGG | + | chr4_2:46194630-46194649 | Msa0602490:intron | 25.0% |
! | AGTTGTTATGTTAATTTCCA+AGG | - | chr4_2:46194793-46194812 | None:intergenic | 25.0% |
!! | ATGAATGGAAGAATAGTTTT+TGG | - | chr4_2:46194837-46194856 | None:intergenic | 25.0% |
! | TCAAAAAGTTCTTCTCATTA+TGG | - | chr4_2:46194955-46194974 | None:intergenic | 25.0% |
! | TTATAACAGTCATAACATAC+AGG | - | chr4_2:46195022-46195041 | None:intergenic | 25.0% |
! | ACCTTCAAATCAATGTAAAT+AGG | + | chr4_2:46195097-46195116 | Msa0602490:intron | 25.0% |
!!! | TCCTATTTACATTGATTTGA+AGG | - | chr4_2:46195101-46195120 | None:intergenic | 25.0% |
!!! | ATTAAATGTTTTTTGTAGCC+AGG | + | chr4_2:46195239-46195258 | Msa0602490:intron | 25.0% |
! | TATCAAAATTATAGCTACAG+GGG | - | chr4_2:46195541-46195560 | None:intergenic | 25.0% |
! | CTATCAAAATTATAGCTACA+GGG | - | chr4_2:46195542-46195561 | None:intergenic | 25.0% |
!! | ATTTTCCTTAACAGTCTATT+TGG | + | chr4_2:46195625-46195644 | Msa0602490:CDS | 25.0% |
!! | TTTTCCTTAACAGTCTATTT+GGG | + | chr4_2:46195626-46195645 | Msa0602490:CDS | 25.0% |
! | ATGAAGAAAAAAACCATACT+TGG | - | chr4_2:46195786-46195805 | None:intergenic | 25.0% |
!!! | AGTATGGTTTTTTTCTTCAT+TGG | + | chr4_2:46195786-46195805 | Msa0602490:intron | 25.0% |
! | ACGATAAAATGAAAACACAA+GGG | - | chr4_2:46195976-46195995 | None:intergenic | 25.0% |
! | AACGATAAAATGAAAACACA+AGG | - | chr4_2:46195977-46195996 | None:intergenic | 25.0% |
! | CTGATCTTAAAATGGATATT+AGG | - | chr4_2:46196134-46196153 | None:intergenic | 25.0% |
!! | AGAAACAAAAATGATTAGCT+TGG | - | chr4_2:46196209-46196228 | None:intergenic | 25.0% |
! | AATAATCCTCATAAAATCTG+TGG | - | chr4_2:46196291-46196310 | None:intergenic | 25.0% |
! | GAAATCTCTATAATATCATC+AGG | - | chr4_2:46196324-46196343 | None:intergenic | 25.0% |
! | ATGTAACAAAACATTTCATG+TGG | + | chr4_2:46196944-46196963 | Msa0602490:intron | 25.0% |
! | TGTAACAAAACATTTCATGT+GGG | + | chr4_2:46196945-46196964 | Msa0602490:intron | 25.0% |
! | TTATATACATGTCAGTGTAA+AGG | - | chr4_2:46197278-46197297 | None:intergenic | 25.0% |
! | AATTAACCCCTATCTAAAAA+AGG | - | chr4_2:46197308-46197327 | None:intergenic | 25.0% |
!! | TTCTTTATATAGGGATTAGT+CGG | + | chr4_2:46197774-46197793 | Msa0602490:intron | 25.0% |
! | TTGAACAGACATTGTATTTA+TGG | + | chr4_2:46197826-46197845 | Msa0602490:intron | 25.0% |
! | ATGCTTATATTCATAAAGTG+GGG | - | chr4_2:46197989-46198008 | None:intergenic | 25.0% |
!!! | TTGCTGATTGCAATTTTAAT+AGG | + | chr4_2:46198205-46198224 | Msa0602490:intron | 25.0% |
!! | TGCTTTTATACTACTTATGA+TGG | + | chr4_2:46198281-46198300 | Msa0602490:CDS | 25.0% |
! | TATATTTGTCCATAAACCAA+GGG | - | chr4_2:46198446-46198465 | None:intergenic | 25.0% |
! | ATATATTTGTCCATAAACCA+AGG | - | chr4_2:46198447-46198466 | None:intergenic | 25.0% |
! | TTATGGACAAATATATGCAA+AGG | + | chr4_2:46198451-46198470 | Msa0602490:three_prime_UTR | 25.0% |
! | AAACAGAAAACGATAATTTG+TGG | + | chr4_2:46198493-46198512 | Msa0602490:three_prime_UTR | 25.0% |
!! | AACAGAAAACGATAATTTGT+GGG | + | chr4_2:46198494-46198513 | Msa0602490:three_prime_UTR | 25.0% |
!! | TTCATTTTATCACTTAGAGT+AGG | + | chr4_2:46198679-46198698 | Msa0602490:three_prime_UTR | 25.0% |
! | CTTACAAGGATATAAAAGAA+TGG | - | chr4_2:46198856-46198875 | None:intergenic | 25.0% |
!! | CATTCTTTTATATCCTTGTA+AGG | + | chr4_2:46198854-46198873 | Msa0602490:three_prime_UTR | 25.0% |
! | AATGCTGCATTGTTGAATTT+TGG | + | chr4_2:46187519-46187538 | Msa0602490:intron | 30.0% |
!!! | TTGAATTTTGGAATTTCGTG+CGG | + | chr4_2:46187531-46187550 | Msa0602490:intron | 30.0% |
!! | TGGTTGATGAGTTGATAATT+TGG | + | chr4_2:46187835-46187854 | Msa0602490:intron | 30.0% |
! | ACGTGCATCTTTGAAAATAT+AGG | - | chr4_2:46187962-46187981 | None:intergenic | 30.0% |
! | TGATTATTTTCTCATGTCAC+TGG | + | chr4_2:46188295-46188314 | Msa0602490:intron | 30.0% |
! | GATTATTTTCTCATGTCACT+GGG | + | chr4_2:46188296-46188315 | Msa0602490:intron | 30.0% |
GTGACCACATAAGTAAAAAT+TGG | + | chr4_2:46188589-46188608 | Msa0602490:intron | 30.0% | |
AAGAACCATCTACATAACAT+AGG | + | chr4_2:46188614-46188633 | Msa0602490:intron | 30.0% | |
ATACTCCTATGTTATGTAGA+TGG | - | chr4_2:46188622-46188641 | None:intergenic | 30.0% | |
!! | TACTTTTTGAATCCCACATA+TGG | - | chr4_2:46188962-46188981 | None:intergenic | 30.0% |
ATCTCTAATTTAGATGTTGG+AGG | + | chr4_2:46189042-46189061 | Msa0602490:intron | 30.0% | |
! | TTAACAAATGTTCTCTGGAA+GGG | - | chr4_2:46189149-46189168 | None:intergenic | 30.0% |
TTATGTTTAGACTTTGTTCG+TGG | + | chr4_2:46189266-46189285 | Msa0602490:intron | 30.0% | |
! | AGGTTCAAACTTTAGGAAAT+AGG | + | chr4_2:46189417-46189436 | Msa0602490:intron | 30.0% |
GAATTAATGCCAACTGAATT+TGG | + | chr4_2:46189470-46189489 | Msa0602490:intron | 30.0% | |
!! | TGAATTTGGTGTATACGATA+TGG | + | chr4_2:46189484-46189503 | Msa0602490:intron | 30.0% |
TGACAATAATTAGGTAGAAG+AGG | + | chr4_2:46189511-46189530 | Msa0602490:intron | 30.0% | |
TAAGGAGTGAAGTGATAAAA+AGG | + | chr4_2:46189575-46189594 | Msa0602490:intron | 30.0% | |
AAGGAGTGAAGTGATAAAAA+GGG | + | chr4_2:46189576-46189595 | Msa0602490:intron | 30.0% | |
TTTAAAGGGTTCATTCTTGA+GGG | - | chr4_2:46189922-46189941 | None:intergenic | 30.0% | |
!! | TTTTAAAGGGTTCATTCTTG+AGG | - | chr4_2:46189923-46189942 | None:intergenic | 30.0% |
TTGACTAAATAGTAGCAAGA+TGG | + | chr4_2:46189968-46189987 | Msa0602490:intron | 30.0% | |
CAAAGAAATCTCTTCTTCAA+TGG | - | chr4_2:46190039-46190058 | None:intergenic | 30.0% | |
CATTGAAGAAGAGATTTCTT+TGG | + | chr4_2:46190037-46190056 | Msa0602490:intron | 30.0% | |
TATTCATGATGAACATGGAT+GGG | - | chr4_2:46190292-46190311 | None:intergenic | 30.0% | |
TTATTCATGATGAACATGGA+TGG | - | chr4_2:46190293-46190312 | None:intergenic | 30.0% | |
ATCGTTATTCATGATGAACA+TGG | - | chr4_2:46190297-46190316 | None:intergenic | 30.0% | |
AATAACGATTGAATGCTTGA+GGG | + | chr4_2:46190308-46190327 | Msa0602490:intron | 30.0% | |
! | GTATGTCTAAAGTAAGATAC+AGG | - | chr4_2:46190363-46190382 | None:intergenic | 30.0% |
!!! | CTGCATTTTGTTTTTTTGAC+AGG | + | chr4_2:46190594-46190613 | Msa0602490:intron | 30.0% |
GTTCAAAATTGTTCTGCAAA+AGG | + | chr4_2:46190953-46190972 | Msa0602490:CDS | 30.0% | |
CATCACTTAGCATTAGTTAT+TGG | + | chr4_2:46191110-46191129 | Msa0602490:intron | 30.0% | |
! | GTATATGAGAGAGAGTATAT+AGG | - | chr4_2:46191257-46191276 | None:intergenic | 30.0% |
! | CTGGTTTAAGATTTATAAGC+GGG | + | chr4_2:46191576-46191595 | Msa0602490:CDS | 30.0% |
TTTGTAAATCCAAAGTTCTC+AGG | + | chr4_2:46191603-46191622 | Msa0602490:CDS | 30.0% | |
AAAACCATCTCAGTTGAAAT+AGG | - | chr4_2:46191707-46191726 | None:intergenic | 30.0% | |
CAAAACAATGCATAAATTGG+TGG | - | chr4_2:46191809-46191828 | None:intergenic | 30.0% | |
!!! | TGTTTGTTGTGTTTTTCTCT+GGG | + | chr4_2:46191855-46191874 | Msa0602490:CDS | 30.0% |
TACTTATATCTTCAGGAACA+GGG | - | chr4_2:46191937-46191956 | None:intergenic | 30.0% | |
TTACTTATATCTTCAGGAAC+AGG | - | chr4_2:46191938-46191957 | None:intergenic | 30.0% | |
TCCAGTCTCTATATAATACA+GGG | + | chr4_2:46192059-46192078 | Msa0602490:intron | 30.0% | |
! | TATATAATACAGGGCTTTTC+AGG | + | chr4_2:46192068-46192087 | Msa0602490:intron | 30.0% |
!!! | TTATTTTAAGTTGCATGCCA+GGG | + | chr4_2:46192126-46192145 | Msa0602490:intron | 30.0% |
AAGCAAATAAAGAAGACTCT+TGG | - | chr4_2:46192214-46192233 | None:intergenic | 30.0% | |
AAACAACATCAAGAACCTAA+AGG | - | chr4_2:46192345-46192364 | None:intergenic | 30.0% | |
TGAAAACCGTAGGATTTATA+AGG | + | chr4_2:46192409-46192428 | Msa0602490:intron | 30.0% | |
! | CGTAGGATTTATAAGGTTTT+TGG | + | chr4_2:46192416-46192435 | Msa0602490:intron | 30.0% |
!!! | GATTTATAAGGTTTTTGGTC+AGG | + | chr4_2:46192421-46192440 | Msa0602490:intron | 30.0% |
! | AAAAAATGTCTTGTTGGAGA+GGG | + | chr4_2:46193014-46193033 | Msa0602490:CDS | 30.0% |
TGAGGATCAAACAAATTTGA+CGG | - | chr4_2:46193075-46193094 | None:intergenic | 30.0% | |
GCAACTCCTCAAAATTTAAA+AGG | - | chr4_2:46193111-46193130 | None:intergenic | 30.0% | |
!! | TTGGTTCTAAAATATGTAGG+TGG | - | chr4_2:46193281-46193300 | None:intergenic | 30.0% |
!! | CTGTTGGTTCTAAAATATGT+AGG | - | chr4_2:46193284-46193303 | None:intergenic | 30.0% |
ATATGGATTTGTGAAACTGT+TGG | - | chr4_2:46193300-46193319 | None:intergenic | 30.0% | |
GCATCTACAATTTCTTGATA+TGG | - | chr4_2:46193317-46193336 | None:intergenic | 30.0% | |
CAAGAAATTGTAGATGCATA+CGG | + | chr4_2:46193320-46193339 | Msa0602490:CDS | 30.0% | |
AAGAAATTGTAGATGCATAC+GGG | + | chr4_2:46193321-46193340 | Msa0602490:CDS | 30.0% | |
TTTCAATTGTTAACAGCACA+TGG | - | chr4_2:46193437-46193456 | None:intergenic | 30.0% | |
!! | TCCTAACAAGCCATTTTATT+TGG | + | chr4_2:46193460-46193479 | Msa0602490:intron | 30.0% |
ATAATAGTTGTGTAAACTGC+TGG | - | chr4_2:46193514-46193533 | None:intergenic | 30.0% | |
AAGTGTGACACAAATAAAGT+AGG | + | chr4_2:46193653-46193672 | Msa0602490:intron | 30.0% | |
! | TTTTCCATCTGGTGTTTAAT+AGG | + | chr4_2:46193789-46193808 | Msa0602490:intron | 30.0% |
TTTCCATCTGGTGTTTAATA+GGG | + | chr4_2:46193790-46193809 | Msa0602490:intron | 30.0% | |
CACCAAATTATGTGTTTATC+AGG | - | chr4_2:46193871-46193890 | None:intergenic | 30.0% | |
CTGATAAACACATAATTTGG+TGG | + | chr4_2:46193869-46193888 | Msa0602490:intron | 30.0% | |
! | AGCTTTATGGAGATGTTATT+TGG | + | chr4_2:46194058-46194077 | Msa0602490:CDS | 30.0% |
! | TTTATGGAGATGTTATTTGG+TGG | + | chr4_2:46194061-46194080 | Msa0602490:CDS | 30.0% |
! | TTATGGAGATGTTATTTGGT+GGG | + | chr4_2:46194062-46194081 | Msa0602490:CDS | 30.0% |
GACACACTAAATATGTGAAA+CGG | - | chr4_2:46194341-46194360 | None:intergenic | 30.0% | |
TATTCCATCGCCTAAATTAT+TGG | + | chr4_2:46194447-46194466 | Msa0602490:intron | 30.0% | |
TTGAGAACTCTTCTAACTTT+GGG | + | chr4_2:46194530-46194549 | Msa0602490:intron | 30.0% | |
TTTACTGTAATATGCCATAC+GGG | + | chr4_2:46194631-46194650 | Msa0602490:intron | 30.0% | |
! | CCTCGTTCTTAAAACTATTT+TGG | - | chr4_2:46194757-46194776 | None:intergenic | 30.0% |
!!! | CCAAAATAGTTTTAAGAACG+AGG | + | chr4_2:46194754-46194773 | Msa0602490:intron | 30.0% |
!! | TGGAAGAATAGTTTTTGGAT+AGG | - | chr4_2:46194832-46194851 | None:intergenic | 30.0% |
TCGACAATATCAGATGTATT+TGG | + | chr4_2:46194976-46194995 | Msa0602490:intron | 30.0% | |
!! | AATTGAAGCGCTGTTTATTT+AGG | + | chr4_2:46195047-46195066 | Msa0602490:intron | 30.0% |
!!! | GCACTATTTTGAAGTACAAA+AGG | - | chr4_2:46195183-46195202 | None:intergenic | 30.0% |
ATCTTGAGAGAGTTTAGAAA+GGG | - | chr4_2:46195401-46195420 | None:intergenic | 30.0% | |
ATGAAGATGTCCATTCTATT+TGG | + | chr4_2:46195419-46195438 | Msa0602490:CDS | 30.0% | |
TATTTCAATGCTCGTTTCTT+TGG | + | chr4_2:46195476-46195495 | Msa0602490:CDS | 30.0% | |
ATCAAAATTATAGCTACAGG+GGG | - | chr4_2:46195540-46195559 | None:intergenic | 30.0% | |
GCTATCAAAATTATAGCTAC+AGG | - | chr4_2:46195543-46195562 | None:intergenic | 30.0% | |
CATTATGTACACATGCTTAT+CGG | + | chr4_2:46196051-46196070 | Msa0602490:intron | 30.0% | |
! | AGAGGAATTTAATTTCAGTG+AGG | + | chr4_2:46196420-46196439 | Msa0602490:CDS | 30.0% |
ACTCAATGGAATGAATCATT+TGG | - | chr4_2:46196456-46196475 | None:intergenic | 30.0% | |
AACACCATATCAAAGGTTAT+AGG | - | chr4_2:46196687-46196706 | None:intergenic | 30.0% | |
GTTTGAAAACACCATATCAA+AGG | - | chr4_2:46196694-46196713 | None:intergenic | 30.0% | |
! | TATGGTGTTTTCAAACTCTA+TGG | + | chr4_2:46196698-46196717 | Msa0602490:intron | 30.0% |
TATCATGCAATGCTAGATAA+AGG | + | chr4_2:46196821-46196840 | Msa0602490:intron | 30.0% | |
!!! | GTAAAGGTTTTTTACACTGT+CGG | - | chr4_2:46197262-46197281 | None:intergenic | 30.0% |
!! | AGAGAAATATGATGGATTTG+AGG | - | chr4_2:46197398-46197417 | None:intergenic | 30.0% |
GTGAGAAAAGAGAAATATGA+TGG | - | chr4_2:46197406-46197425 | None:intergenic | 30.0% | |
GTTATTTGAAGATACTCTTG+TGG | + | chr4_2:46197605-46197624 | Msa0602490:intron | 30.0% | |
TTGAGATTGAAGTACGAAAT+GGG | + | chr4_2:46197714-46197733 | Msa0602490:intron | 30.0% | |
! | GTATTTATGGTTTGTGTTTG+TGG | + | chr4_2:46197839-46197858 | Msa0602490:intron | 30.0% |
CACTATTGTCAATAGATTTC+TGG | + | chr4_2:46197862-46197881 | Msa0602490:intron | 30.0% | |
TGCATAGTTATATCTTGACA+AGG | - | chr4_2:46197952-46197971 | None:intergenic | 30.0% | |
TAAAGTGGGGAAATTGAAAT+TGG | - | chr4_2:46197976-46197995 | None:intergenic | 30.0% | |
ATAAGCATTTCGTTTGTCTA+TGG | + | chr4_2:46198001-46198020 | Msa0602490:intron | 30.0% | |
TAAGCATTTCGTTTGTCTAT+GGG | + | chr4_2:46198002-46198021 | Msa0602490:intron | 30.0% | |
! | ATGTATCCACTCTTTTATTG+AGG | + | chr4_2:46198086-46198105 | Msa0602490:intron | 30.0% |
AATCTTATCATTCGGTTAGT+GGG | + | chr4_2:46198234-46198253 | Msa0602490:CDS | 30.0% | |
ATTGATAAATTTGTCTCCCT+TGG | + | chr4_2:46198427-46198446 | Msa0602490:exon | 30.0% | |
! | ATAATTTGTGGGAACCAATT+TGG | + | chr4_2:46198505-46198524 | Msa0602490:three_prime_UTR | 30.0% |
ATTAATAACCGTTTGAAGGG+TGG | - | chr4_2:46187172-46187191 | None:intergenic | 35.0% | |
CACAGAAAAACTACCTTCAA+TGG | + | chr4_2:46187251-46187270 | Msa0602490:CDS | 35.0% | |
TTGAACGAATGTCATCTTCT+CGG | - | chr4_2:46187289-46187308 | None:intergenic | 35.0% | |
!! | TGGTGTTGTTTGAATTGTGT+GGG | + | chr4_2:46187462-46187481 | Msa0602490:intron | 35.0% |
!!! | TGAATTTTGGAATTTCGTGC+GGG | + | chr4_2:46187532-46187551 | Msa0602490:intron | 35.0% |
CTAAATAATGGTGTGAGAGT+TGG | + | chr4_2:46187815-46187834 | Msa0602490:intron | 35.0% | |
TACGTTGCATGCTAAATGTT+TGG | + | chr4_2:46187883-46187902 | Msa0602490:intron | 35.0% | |
CAAAAATAACTTAGTAGGGC+CGG | - | chr4_2:46188277-46188296 | None:intergenic | 35.0% | |
! | TTTCAAGTACTTGGTGAAGA+TGG | + | chr4_2:46188320-46188339 | Msa0602490:intron | 35.0% |
! | TTCAAGTACTTGGTGAAGAT+GGG | + | chr4_2:46188321-46188340 | Msa0602490:intron | 35.0% |
!! | TCCTTGTTTAACTTGTTGAG+AGG | + | chr4_2:46188357-46188376 | Msa0602490:intron | 35.0% |
!! | CCTTGTTTAACTTGTTGAGA+GGG | + | chr4_2:46188358-46188377 | Msa0602490:intron | 35.0% |
! | AACTTTGGTGTAGGTTCAAT+AGG | + | chr4_2:46188453-46188472 | Msa0602490:intron | 35.0% |
TATACTGCTGCTACTGATAA+TGG | + | chr4_2:46188536-46188555 | Msa0602490:intron | 35.0% | |
!! | GTATAGTTAAAGTGCTGTAC+AGG | + | chr4_2:46188638-46188657 | Msa0602490:intron | 35.0% |
GATCTGGATCTCAATATTTC+AGG | + | chr4_2:46188700-46188719 | Msa0602490:intron | 35.0% | |
TATTCTCTCAGACATTTCAC+CGG | + | chr4_2:46188767-46188786 | Msa0602490:intron | 35.0% | |
TATTACAATAGTATGCTGGC+TGG | + | chr4_2:46188876-46188895 | Msa0602490:intron | 35.0% | |
TGAATATTTCCTAACTCGCA+TGG | - | chr4_2:46188912-46188931 | None:intergenic | 35.0% | |
! | TTTTTGAATCCCACATATGG+CGG | - | chr4_2:46188959-46188978 | None:intergenic | 35.0% |
! | TAACAAATGTTCTCTGGAAG+GGG | - | chr4_2:46189148-46189167 | None:intergenic | 35.0% |
GTTAACAAATGTTCTCTGGA+AGG | - | chr4_2:46189150-46189169 | None:intergenic | 35.0% | |
!! | TTAATGCAGTGTTGATTACC+TGG | - | chr4_2:46189172-46189191 | None:intergenic | 35.0% |
!! | TGCCCTCTTTGTTTACTTTT+TGG | + | chr4_2:46189219-46189238 | Msa0602490:intron | 35.0% |
TTTAGACTTTGTTCGTGGTT+GGG | + | chr4_2:46189271-46189290 | Msa0602490:intron | 35.0% | |
! | GGCATTAATTCTAGAAAGAG+AGG | - | chr4_2:46189461-46189480 | None:intergenic | 35.0% |
TCGTATACACCAAATTCAGT+TGG | - | chr4_2:46189482-46189501 | None:intergenic | 35.0% | |
TAGGTAGAAGAGGATGTATA+TGG | + | chr4_2:46189521-46189540 | Msa0602490:intron | 35.0% | |
TGAAGTGATAAAAAGGGAGA+GGG | + | chr4_2:46189582-46189601 | Msa0602490:intron | 35.0% | |
TTAAAGGGTTCATTCTTGAG+GGG | - | chr4_2:46189921-46189940 | None:intergenic | 35.0% | |
TTCCAACCAACTCTTCTAAA+AGG | - | chr4_2:46190006-46190025 | None:intergenic | 35.0% | |
AAATCTCTTCTTCAATGGCA+AGG | - | chr4_2:46190034-46190053 | None:intergenic | 35.0% | |
TCAACAAATCTCTTCTTCCT+TGG | - | chr4_2:46190202-46190221 | None:intergenic | 35.0% | |
GAATAACGATTGAATGCTTG+AGG | + | chr4_2:46190307-46190326 | Msa0602490:intron | 35.0% | |
ATAACGATTGAATGCTTGAG+GGG | + | chr4_2:46190309-46190328 | Msa0602490:intron | 35.0% | |
! | TAGAGTATTATGGGTGATCT+TGG | - | chr4_2:46190437-46190456 | None:intergenic | 35.0% |
CAGAAATGTCAAGAAAGCTA+CGG | + | chr4_2:46190629-46190648 | Msa0602490:CDS | 35.0% | |
CTTTATTGACCTGATCCATT+AGG | - | chr4_2:46190657-46190676 | None:intergenic | 35.0% | |
ATCTGATTGCAAGACAGAAT+GGG | - | chr4_2:46190695-46190714 | None:intergenic | 35.0% | |
TATCTGATTGCAAGACAGAA+TGG | - | chr4_2:46190696-46190715 | None:intergenic | 35.0% | |
CTTGCAATCAGATACATACT+TGG | + | chr4_2:46190702-46190721 | Msa0602490:CDS | 35.0% | |
TACATACTTGGAGGATATAG+AGG | + | chr4_2:46190714-46190733 | Msa0602490:CDS | 35.0% | |
TATGATCATTGTCCTATCCT+AGG | + | chr4_2:46190771-46190790 | Msa0602490:intron | 35.0% | |
ATGATCATTGTCCTATCCTA+GGG | + | chr4_2:46190772-46190791 | Msa0602490:intron | 35.0% | |
! | GCAGAACAATTTTGAACTCA+AGG | - | chr4_2:46190950-46190969 | None:intergenic | 35.0% |
!!! | TCTGCAAAAGGTATTTTCCA+TGG | + | chr4_2:46190965-46190984 | Msa0602490:intron | 35.0% |
! | CCTAAATAACAGAGAGCATA+TGG | - | chr4_2:46191041-46191060 | None:intergenic | 35.0% |
! | CCATATGCTCTCTGTTATTT+AGG | + | chr4_2:46191038-46191057 | Msa0602490:intron | 35.0% |
! | TATGAGAGAGAGTATATAGG+AGG | - | chr4_2:46191254-46191273 | None:intergenic | 35.0% |
TAGTTGTATGGGCATATTTC+AGG | + | chr4_2:46191286-46191305 | Msa0602490:intron | 35.0% | |
GGAACCTGTTCAAACAAAAA+TGG | - | chr4_2:46191407-46191426 | None:intergenic | 35.0% | |
!! | CCAGATTGGTTAGATTTTGA+TGG | - | chr4_2:46191560-46191579 | None:intergenic | 35.0% |
CCATCAAAATCTAACCAATC+TGG | + | chr4_2:46191557-46191576 | Msa0602490:CDS | 35.0% | |
! | AGGCAATATGCTTTTCAATC+AGG | + | chr4_2:46191655-46191674 | Msa0602490:CDS | 35.0% |
!!! | GTGTTTGTTGTGTTTTTCTC+TGG | + | chr4_2:46191854-46191873 | Msa0602490:CDS | 35.0% |
!!! | GTTTGTTGTGTTTTTCTCTG+GGG | + | chr4_2:46191856-46191875 | Msa0602490:CDS | 35.0% |
GTAAACAAAGGCAAATAACC+CGG | + | chr4_2:46191954-46191973 | Msa0602490:CDS | 35.0% | |
TAAACAAAGGCAAATAACCC+GGG | + | chr4_2:46191955-46191974 | Msa0602490:CDS | 35.0% | |
GTCCAGTCTCTATATAATAC+AGG | + | chr4_2:46192058-46192077 | Msa0602490:intron | 35.0% | |
!!! | GTTATTTTAAGTTGCATGCC+AGG | + | chr4_2:46192125-46192144 | Msa0602490:intron | 35.0% |
ATTGCTGATACTGATATTGC+TGG | - | chr4_2:46192282-46192301 | None:intergenic | 35.0% | |
GAGAAAAATAGTAGACTGAG+TGG | + | chr4_2:46192318-46192337 | Msa0602490:intron | 35.0% | |
!!! | AAGGTTTTTGGTCAGGAAAT+TGG | + | chr4_2:46192428-46192447 | Msa0602490:intron | 35.0% |
AATAAGGCTCTATCTTCTGT+AGG | + | chr4_2:46192771-46192790 | Msa0602490:CDS | 35.0% | |
TAGGAGGTCATTTAGCAAAA+TGG | + | chr4_2:46192790-46192809 | Msa0602490:CDS | 35.0% | |
AGGTCATTTAGCAAAATGGA+TGG | + | chr4_2:46192794-46192813 | Msa0602490:CDS | 35.0% | |
TTTAGCAAAATGGATGGACA+TGG | + | chr4_2:46192800-46192819 | Msa0602490:CDS | 35.0% | |
TCTGAATGACTTCTTGTCTA+AGG | + | chr4_2:46192835-46192854 | Msa0602490:intron | 35.0% | |
GTCACCAAAAAATGTCTTGT+TGG | + | chr4_2:46193008-46193027 | Msa0602490:CDS | 35.0% | |
!!! | CTCTCCAACAAGACATTTTT+TGG | - | chr4_2:46193015-46193034 | None:intergenic | 35.0% |
! | CAAAAAATGTCTTGTTGGAG+AGG | + | chr4_2:46193013-46193032 | Msa0602490:CDS | 35.0% |
! | ACCTGTGCTTTTGCAAATAT+CGG | - | chr4_2:46193047-46193066 | None:intergenic | 35.0% |
! | TCTTCTGATTTTCCAGATTC+AGG | + | chr4_2:46193178-46193197 | Msa0602490:intron | 35.0% |
! | TTTTGACAGCAATTCTCAAG+TGG | + | chr4_2:46193220-46193239 | Msa0602490:CDS | 35.0% |
TTTGACAGCAATTCTCAAGT+GGG | + | chr4_2:46193221-46193240 | Msa0602490:CDS | 35.0% | |
!! | GCCAAATAAAATGGCTTGTT+AGG | - | chr4_2:46193464-46193483 | None:intergenic | 35.0% |
TGCAACACTGCCAAATAAAA+TGG | - | chr4_2:46193473-46193492 | None:intergenic | 35.0% | |
ACATCACCGCAAAAAGAAAT+GGG | - | chr4_2:46193540-46193559 | None:intergenic | 35.0% | |
AACATCACCGCAAAAAGAAA+TGG | - | chr4_2:46193541-46193560 | None:intergenic | 35.0% | |
! | TTTCTTTTTGCGGTGATGTT+TGG | + | chr4_2:46193541-46193560 | Msa0602490:CDS | 35.0% |
TGGTTCTTATAGCACATGAA+AGG | + | chr4_2:46193602-46193621 | Msa0602490:CDS | 35.0% | |
TGACACAAATAAAGTAGGCA+TGG | + | chr4_2:46193658-46193677 | Msa0602490:intron | 35.0% | |
ACAAATAAAGTAGGCATGGA+AGG | + | chr4_2:46193662-46193681 | Msa0602490:intron | 35.0% | |
TGAGGCCCATTATGATATAT+TGG | - | chr4_2:46193694-46193713 | None:intergenic | 35.0% | |
CATAATAGATGTCACATGTG+AGG | - | chr4_2:46193712-46193731 | None:intergenic | 35.0% | |
CTCACATGTGACATCTATTA+TGG | + | chr4_2:46193710-46193729 | Msa0602490:intron | 35.0% | |
! | ATCATGCTTCTTTTTCCATC+TGG | + | chr4_2:46193778-46193797 | Msa0602490:intron | 35.0% |
ATTTACCTATGTTCTGCTCT+TGG | + | chr4_2:46193987-46194006 | Msa0602490:intron | 35.0% | |
! | TCGGTTCCTTTTCACATATT+TGG | + | chr4_2:46194151-46194170 | Msa0602490:CDS | 35.0% |
AACACCAATAATTTAGGCGA+TGG | - | chr4_2:46194454-46194473 | None:intergenic | 35.0% | |
GTTGAGAACTCTTCTAACTT+TGG | + | chr4_2:46194529-46194548 | Msa0602490:intron | 35.0% | |
!!! | TAGTTTTAAGAACGAGGTTC+AGG | + | chr4_2:46194760-46194779 | Msa0602490:intron | 35.0% |
!!! | AGTTTTAAGAACGAGGTTCA+GGG | + | chr4_2:46194761-46194780 | Msa0602490:intron | 35.0% |
AGTCATCAACATGACATGAA+TGG | - | chr4_2:46194852-46194871 | None:intergenic | 35.0% | |
! | AAGCGCTGTTTATTTAGGAT+TGG | + | chr4_2:46195052-46195071 | Msa0602490:intron | 35.0% |
GTAAATAGGACTCGTTTGAA+TGG | + | chr4_2:46195111-46195130 | Msa0602490:intron | 35.0% | |
TTGTTCTCCTCCTCTTATTA+GGG | + | chr4_2:46195289-46195308 | Msa0602490:intron | 35.0% | |
CATCTTGAGAGAGTTTAGAA+AGG | - | chr4_2:46195402-46195421 | None:intergenic | 35.0% | |
ATGTACCACACCAAATAGAA+TGG | - | chr4_2:46195432-46195451 | None:intergenic | 35.0% | |
CTGTTAAGGAAAATCATCTG+CGG | - | chr4_2:46195619-46195638 | None:intergenic | 35.0% | |
GATACCCAAATAGACTGTTA+AGG | - | chr4_2:46195633-46195652 | None:intergenic | 35.0% | |
TTCTCACCAAGATTGTCAAA+GGG | - | chr4_2:46195736-46195755 | None:intergenic | 35.0% | |
ATTCTCACCAAGATTGTCAA+AGG | - | chr4_2:46195737-46195756 | None:intergenic | 35.0% | |
GAAAAAAACCATACTTGGAG+TGG | - | chr4_2:46195781-46195800 | None:intergenic | 35.0% | |
! | TCAACAAAAGCACAGAACAA+AGG | - | chr4_2:46196244-46196263 | None:intergenic | 35.0% |
! | GGCATTGCTTTGTTAATAAC+TGG | - | chr4_2:46196270-46196289 | None:intergenic | 35.0% |
AGATTTCAAGGACGCAATTA+TGG | + | chr4_2:46196337-46196356 | Msa0602490:CDS | 35.0% | |
! | CATTCCATTGAGTTTGTTCT+TGG | + | chr4_2:46196463-46196482 | Msa0602490:CDS | 35.0% |
AGAACCAAGAACAAACTCAA+TGG | - | chr4_2:46196470-46196489 | None:intergenic | 35.0% | |
AGCATCATATCTTCGACTTT+GGG | + | chr4_2:46196501-46196520 | Msa0602490:CDS | 35.0% | |
ACACAGAAGATAGTGTAAAC+AGG | - | chr4_2:46196731-46196750 | None:intergenic | 35.0% | |
ATGCAATGCTAGATAAAGGA+TGG | + | chr4_2:46196825-46196844 | Msa0602490:intron | 35.0% | |
TTGAAAGTCAAACATACGAG+TGG | - | chr4_2:46197188-46197207 | None:intergenic | 35.0% | |
!! | GATGGATTTGAGGTATTGTA+TGG | - | chr4_2:46197388-46197407 | None:intergenic | 35.0% |
GAAATTGTGAAGAGAGAAAC+AGG | - | chr4_2:46197440-46197459 | None:intergenic | 35.0% | |
AAAAGACCAAATGTATTCGG+TGG | - | chr4_2:46197484-46197503 | None:intergenic | 35.0% | |
GCGAAAAGACCAAATGTATT+CGG | - | chr4_2:46197487-46197506 | None:intergenic | 35.0% | |
! | GACCTTAAGAGAAAGTGTAA+TGG | + | chr4_2:46197534-46197553 | Msa0602490:intron | 35.0% |
TGCCATTACACTTTCTCTTA+AGG | - | chr4_2:46197539-46197558 | None:intergenic | 35.0% | |
TTTGAAGATACTCTTGTGGT+TGG | + | chr4_2:46197609-46197628 | Msa0602490:intron | 35.0% | |
GTTGAGATTGAAGTACGAAA+TGG | + | chr4_2:46197713-46197732 | Msa0602490:intron | 35.0% | |
AAGTACGAAATGGGTATCAT+TGG | + | chr4_2:46197723-46197742 | Msa0602490:intron | 35.0% | |
TAGATTAGTGTAGCTTCTGA+TGG | + | chr4_2:46197911-46197930 | Msa0602490:intron | 35.0% | |
AGATTAGTGTAGCTTCTGAT+GGG | + | chr4_2:46197912-46197931 | Msa0602490:intron | 35.0% | |
CTTGACAAGGTAAAATTCCT+GGG | - | chr4_2:46197939-46197958 | None:intergenic | 35.0% | |
TCTTGACAAGGTAAAATTCC+TGG | - | chr4_2:46197940-46197959 | None:intergenic | 35.0% | |
AAGCATTTCGTTTGTCTATG+GGG | + | chr4_2:46198003-46198022 | Msa0602490:intron | 35.0% | |
AAGAGTGGATACATGATAAC+AGG | - | chr4_2:46198080-46198099 | None:intergenic | 35.0% | |
AAGACACCTCAATAAAAGAG+TGG | - | chr4_2:46198095-46198114 | None:intergenic | 35.0% | |
AAAGGAATGCAAACATGGAT+GGG | - | chr4_2:46198132-46198151 | None:intergenic | 35.0% | |
TAAAGGAATGCAAACATGGA+TGG | - | chr4_2:46198133-46198152 | None:intergenic | 35.0% | |
AAGGTAAAGGAATGCAAACA+TGG | - | chr4_2:46198137-46198156 | None:intergenic | 35.0% | |
GGTACGACAATCTTATCATT+CGG | + | chr4_2:46198226-46198245 | Msa0602490:intron | 35.0% | |
CAATCTTATCATTCGGTTAG+TGG | + | chr4_2:46198233-46198252 | Msa0602490:CDS | 35.0% | |
ATCTTATCATTCGGTTAGTG+GGG | + | chr4_2:46198235-46198254 | Msa0602490:CDS | 35.0% | |
AATAAATTCTACCACGGTGA+TGG | + | chr4_2:46198357-46198376 | Msa0602490:CDS | 35.0% | |
! | TCAATTTTCATCCTCGGTTA+AGG | - | chr4_2:46198412-46198431 | None:intergenic | 35.0% |
AATTTGTCTCCCTTGGTTTA+TGG | + | chr4_2:46198434-46198453 | Msa0602490:three_prime_UTR | 35.0% | |
TTGACTGAGCAACAAAATTC+TGG | + | chr4_2:46198571-46198590 | Msa0602490:three_prime_UTR | 35.0% | |
TCCATCATAGTGTAGCTATT+TGG | + | chr4_2:46198747-46198766 | Msa0602490:three_prime_UTR | 35.0% | |
ACCAAATAGCTACACTATGA+TGG | - | chr4_2:46198751-46198770 | None:intergenic | 35.0% | |
TTGGTACAAACAATGTAGCT+TGG | + | chr4_2:46198766-46198785 | Msa0602490:three_prime_UTR | 35.0% | |
! | GTTTGAAGGGTGGTTAGTTA+CGG | - | chr4_2:46187162-46187181 | None:intergenic | 40.0% |
GTAACTAACCACCCTTCAAA+CGG | + | chr4_2:46187161-46187180 | Msa0602490:five_prime_UTR | 40.0% | |
CACCGAATCATCACCTATTT+AGG | + | chr4_2:46187333-46187352 | Msa0602490:CDS | 40.0% | |
GGCCTAAATAGGTGATGATT+CGG | - | chr4_2:46187338-46187357 | None:intergenic | 40.0% | |
ATCACCTATTTAGGCCAACT+CGG | + | chr4_2:46187342-46187361 | Msa0602490:CDS | 40.0% | |
GAAATTGAAGAAGACCGAGT+TGG | - | chr4_2:46187359-46187378 | None:intergenic | 40.0% | |
GAATGCGTTGAATGTGTTTG+TGG | + | chr4_2:46187442-46187461 | Msa0602490:intron | 40.0% | |
!! | GTGGTGTTGTTTGAATTGTG+TGG | + | chr4_2:46187461-46187480 | Msa0602490:intron | 40.0% |
! | GCTTGTCGTGTTTGTTGATT+TGG | + | chr4_2:46187587-46187606 | Msa0602490:intron | 40.0% |
AGTTGGACACAACTTCAATC+TGG | + | chr4_2:46188136-46188155 | Msa0602490:intron | 40.0% | |
! | TCACTGGGATTTCAAGTACT+TGG | + | chr4_2:46188311-46188330 | Msa0602490:intron | 40.0% |
! | TCAAGTACTTGGTGAAGATG+GGG | + | chr4_2:46188322-46188341 | Msa0602490:intron | 40.0% |
CCCTCTCAACAAGTTAAACA+AGG | - | chr4_2:46188361-46188380 | None:intergenic | 40.0% | |
!!! | TTTGGGTTTTGACTTCCAAC+TGG | + | chr4_2:46188387-46188406 | Msa0602490:intron | 40.0% |
! | CTGTTGCATAACTTTGGTGT+AGG | + | chr4_2:46188444-46188463 | Msa0602490:intron | 40.0% |
CACACAATCAGAATCTAACC+AGG | - | chr4_2:46188508-46188527 | None:intergenic | 40.0% | |
ATTCTCTCAGACATTTCACC+GGG | + | chr4_2:46188768-46188787 | Msa0602490:intron | 40.0% | |
AATATGCTACCATGCGAGTT+AGG | + | chr4_2:46188900-46188919 | Msa0602490:intron | 40.0% | |
! | TTCTCTTTTACCGCCATATG+TGG | + | chr4_2:46188946-46188965 | Msa0602490:intron | 40.0% |
! | TCTCTTTTACCGCCATATGT+GGG | + | chr4_2:46188947-46188966 | Msa0602490:intron | 40.0% |
GGGTGGTAAACCAGAAATTT+GGG | - | chr4_2:46188995-46189014 | None:intergenic | 40.0% | |
TGGGTGGTAAACCAGAAATT+TGG | - | chr4_2:46188996-46189015 | None:intergenic | 40.0% | |
! | CAACAAAACCTTTTCTCGCT+GGG | - | chr4_2:46189015-46189034 | None:intergenic | 40.0% |
! | ACAACAAAACCTTTTCTCGC+TGG | - | chr4_2:46189016-46189035 | None:intergenic | 40.0% |
CCTGGTTAACAAATGTTCTC+TGG | - | chr4_2:46189154-46189173 | None:intergenic | 40.0% | |
! | CCAGAGAACATTTGTTAACC+AGG | + | chr4_2:46189151-46189170 | Msa0602490:CDS | 40.0% |
!! | GAGGGCATTGAAAAAGAAAC+AGG | - | chr4_2:46189206-46189225 | None:intergenic | 40.0% |
GTTTAGACTTTGTTCGTGGT+TGG | + | chr4_2:46189270-46189289 | Msa0602490:intron | 40.0% | |
TAGAAGAGGATGTATATGGC+TGG | + | chr4_2:46189525-46189544 | Msa0602490:intron | 40.0% | |
GTGAAGTGATAAAAAGGGAG+AGG | + | chr4_2:46189581-46189600 | Msa0602490:intron | 40.0% | |
!! | TGAGCACCTTTTAGAAGAGT+TGG | + | chr4_2:46189997-46190016 | Msa0602490:intron | 40.0% |
!! | CACCTTTTAGAAGAGTTGGT+TGG | + | chr4_2:46190001-46190020 | Msa0602490:intron | 40.0% |
!! | TCACTCGAGGCATCTTTTTA+AGG | - | chr4_2:46190145-46190164 | None:intergenic | 40.0% |
TGGATAGTGTTGCATTACCA+AGG | + | chr4_2:46190182-46190201 | Msa0602490:intron | 40.0% | |
AAGAAAGCTACGGTTCCTAA+TGG | + | chr4_2:46190639-46190658 | Msa0602490:CDS | 40.0% | |
ATGGATCAGGTCAATAAAGC+TGG | + | chr4_2:46190658-46190677 | Msa0602490:CDS | 40.0% | |
TGGATCAGGTCAATAAAGCT+GGG | + | chr4_2:46190659-46190678 | Msa0602490:CDS | 40.0% | |
GCAATCAGATACATACTTGG+AGG | + | chr4_2:46190705-46190724 | Msa0602490:CDS | 40.0% | |
! | CAGTTCTCTCTCTTCTGAAA+CGG | - | chr4_2:46191345-46191364 | None:intergenic | 40.0% |
!!! | GACGCCATTTTTGTTTGAAC+AGG | + | chr4_2:46191400-46191419 | Msa0602490:CDS | 40.0% |
TTGTTTGAACAGGTTCCTTG+AGG | + | chr4_2:46191410-46191429 | Msa0602490:intron | 40.0% | |
!! | TGGTTAGATTTTGATGGTCC+AGG | - | chr4_2:46191554-46191573 | None:intergenic | 40.0% |
CCTTTCAAACCTGAGAACTT+TGG | - | chr4_2:46191615-46191634 | None:intergenic | 40.0% | |
CCAAAGTTCTCAGGTTTGAA+AGG | + | chr4_2:46191612-46191631 | Msa0602490:CDS | 40.0% | |
! | GAAAAGCATATTGCCTCTTG+TGG | - | chr4_2:46191651-46191670 | None:intergenic | 40.0% |
! | TATGCTTTTCAATCAGGCAC+CGG | + | chr4_2:46191661-46191680 | Msa0602490:CDS | 40.0% |
!! | TCCATAATTTGCTCATCAGC+CGG | - | chr4_2:46191683-46191702 | None:intergenic | 40.0% |
GGATCCTATTTCAACTGAGA+TGG | + | chr4_2:46191700-46191719 | Msa0602490:CDS | 40.0% | |
! | AGCTAAGCATTTTTACCTCC+CGG | - | chr4_2:46191976-46191995 | None:intergenic | 40.0% |
TATAGAGACTGGACCATACT+TGG | - | chr4_2:46192052-46192071 | None:intergenic | 40.0% | |
GCCCTGTATTATATAGAGAC+TGG | - | chr4_2:46192063-46192082 | None:intergenic | 40.0% | |
AGTTAAGAAGTTGAAGTCCC+TGG | - | chr4_2:46192146-46192165 | None:intergenic | 40.0% | |
ATATGACTGCATGTCACCAT+TGG | + | chr4_2:46192366-46192385 | Msa0602490:intron | 40.0% | |
AACAGGAAGTTGAAAACCGT+AGG | + | chr4_2:46192399-46192418 | Msa0602490:intron | 40.0% | |
ATGACAAGGATGAGAGCTAT+TGG | - | chr4_2:46192927-46192946 | None:intergenic | 40.0% | |
TTACCTAGGACAAGATGACA+AGG | - | chr4_2:46192941-46192960 | None:intergenic | 40.0% | |
! | TCCGATATTTGCAAAAGCAC+AGG | + | chr4_2:46193043-46193062 | Msa0602490:CDS | 40.0% |
TTGACAGCAATTCTCAAGTG+GGG | + | chr4_2:46193222-46193241 | Msa0602490:CDS | 40.0% | |
TAGCCCTATTAAACACCAGA+TGG | - | chr4_2:46193796-46193815 | None:intergenic | 40.0% | |
ATTTGCCAAGAGCAGAACAT+AGG | - | chr4_2:46193995-46194014 | None:intergenic | 40.0% | |
GACGCACCAAATATGTGAAA+AGG | - | chr4_2:46194160-46194179 | None:intergenic | 40.0% | |
TCATGCAGCTGTCTTCTATT+TGG | + | chr4_2:46194383-46194402 | Msa0602490:intron | 40.0% | |
CACTCAACTCATAAGTCAGA+AGG | - | chr4_2:46194565-46194584 | None:intergenic | 40.0% | |
TATGGTCGACAAGTTAAGAG+TGG | - | chr4_2:46194937-46194956 | None:intergenic | 40.0% | |
AAACAGCGTAAGTTAAAGCC+TGG | - | chr4_2:46195260-46195279 | None:intergenic | 40.0% | |
GTTGTTCTCCTCCTCTTATT+AGG | + | chr4_2:46195288-46195307 | Msa0602490:intron | 40.0% | |
GTATGTGCATCCCTAATAAG+AGG | - | chr4_2:46195302-46195321 | None:intergenic | 40.0% | |
ATTAGGGATGCACATACTAC+TGG | + | chr4_2:46195305-46195324 | Msa0602490:intron | 40.0% | |
TACAGAGAACCATACCCATT+TGG | + | chr4_2:46195338-46195357 | Msa0602490:CDS | 40.0% | |
! | GATGTCCATTCTATTTGGTG+TGG | + | chr4_2:46195424-46195443 | Msa0602490:CDS | 40.0% |
TGGTGTGGTACATATGAACT+TGG | + | chr4_2:46195439-46195458 | Msa0602490:CDS | 40.0% | |
GGTGTGGTACATATGAACTT+GGG | + | chr4_2:46195440-46195459 | Msa0602490:CDS | 40.0% | |
!! | CTTGCTCTTCATGTTGCTTT+AGG | + | chr4_2:46195581-46195600 | Msa0602490:intron | 40.0% |
CCACTTGACAACAATGAGAA+GGG | - | chr4_2:46195659-46195678 | None:intergenic | 40.0% | |
ACCACTTGACAACAATGAGA+AGG | - | chr4_2:46195660-46195679 | None:intergenic | 40.0% | |
ATTGTTGTCAAGTGGTGTAC+TGG | + | chr4_2:46195664-46195683 | Msa0602490:CDS | 40.0% | |
TTAAGCCCCTTTGACAATCT+TGG | + | chr4_2:46195727-46195746 | Msa0602490:CDS | 40.0% | |
TCTCACCAAGATTGTCAAAG+GGG | - | chr4_2:46195735-46195754 | None:intergenic | 40.0% | |
TTGGTGAGAATGAGTTGTTC+TGG | + | chr4_2:46195746-46195765 | Msa0602490:CDS | 40.0% | |
TGGTGAGAATGAGTTGTTCT+GGG | + | chr4_2:46195747-46195766 | Msa0602490:CDS | 40.0% | |
AGTTACTGCTCATGATATGC+AGG | + | chr4_2:46195852-46195871 | Msa0602490:intron | 40.0% | |
!!! | GCAGGTTTTGTTATTGCTTC+TGG | + | chr4_2:46195870-46195889 | Msa0602490:intron | 40.0% |
TGAAAACACAAGGGAGACAA+AGG | - | chr4_2:46195967-46195986 | None:intergenic | 40.0% | |
GCAGAAACACAGTCGTAAAA+GGG | - | chr4_2:46196086-46196105 | None:intergenic | 40.0% | |
AGCAGAAACACAGTCGTAAA+AGG | - | chr4_2:46196087-46196106 | None:intergenic | 40.0% | |
! | TACGACTGTGTTTCTGCTTA+TGG | + | chr4_2:46196089-46196108 | Msa0602490:intron | 40.0% |
! | GCAATGCCACAGATTTTATG+AGG | + | chr4_2:46196282-46196301 | Msa0602490:intron | 40.0% |
! | TGTGCTTAATACCTCTGAAG+CGG | + | chr4_2:46196360-46196379 | Msa0602490:CDS | 40.0% |
AAATTCCTCTTGATGTTGCC+TGG | - | chr4_2:46196410-46196429 | None:intergenic | 40.0% | |
CAGCATCATATCTTCGACTT+TGG | + | chr4_2:46196500-46196519 | Msa0602490:CDS | 40.0% | |
ATCTTCGACTTTGGGCATTA+AGG | + | chr4_2:46196509-46196528 | Msa0602490:CDS | 40.0% | |
ATAGGAAACTGAGGCAAGTA+GGG | - | chr4_2:46196554-46196573 | None:intergenic | 40.0% | |
AATAGGAAACTGAGGCAAGT+AGG | - | chr4_2:46196555-46196574 | None:intergenic | 40.0% | |
GTGGCCTATAACCTTTGATA+TGG | + | chr4_2:46196680-46196699 | Msa0602490:intron | 40.0% | |
ACTATGGGATGCACATTGAA+GGG | - | chr4_2:46196761-46196780 | None:intergenic | 40.0% | |
TACTATGGGATGCACATTGA+AGG | - | chr4_2:46196762-46196781 | None:intergenic | 40.0% | |
! | GATGGCTTTTACACTGTGTT+TGG | + | chr4_2:46196843-46196862 | Msa0602490:intron | 40.0% |
! | ACCAAATGTATTCGGTGGAA+GGG | - | chr4_2:46197479-46197498 | None:intergenic | 40.0% |
!!! | ACTCTTGTGGTTGGTTTTGT+AGG | + | chr4_2:46197618-46197637 | Msa0602490:intron | 40.0% |
!!! | CTCTTGTGGTTGGTTTTGTA+GGG | + | chr4_2:46197619-46197638 | Msa0602490:intron | 40.0% |
GTTAAGGTGGCAAAGGAAAA+AGG | - | chr4_2:46198396-46198415 | None:intergenic | 40.0% | |
! | ATTTTCATCCTCGGTTAAGG+TGG | - | chr4_2:46198409-46198428 | None:intergenic | 40.0% |
ATTTGTGGGAACCAATTTGG+TGG | + | chr4_2:46198508-46198527 | Msa0602490:three_prime_UTR | 40.0% | |
ATATCAAGCTGCACAACATC+AGG | - | chr4_2:46198551-46198570 | None:intergenic | 40.0% | |
!!! | AATTCTGGCTCATTTTCCCA+TGG | + | chr4_2:46198586-46198605 | Msa0602490:three_prime_UTR | 40.0% |
!! | TGTAGCTTGGACTTTTGAGA+AGG | + | chr4_2:46198779-46198798 | Msa0602490:three_prime_UTR | 40.0% |
GCTTGTTCATTTCTCTCCTA+AGG | + | chr4_2:46198897-46198916 | Msa0602490:three_prime_UTR | 40.0% | |
TTGCGACGAAGAAAGTGAAG+CGG | + | chr4_2:46187116-46187135 | Msa0602490:five_prime_UTR | 45.0% | |
GAACGCATGAGATCCATTGA+AGG | - | chr4_2:46187267-46187286 | None:intergenic | 45.0% | |
!! | ATAGGTGATGATTCGGTGAG+CGG | - | chr4_2:46187331-46187350 | None:intergenic | 45.0% |
! | AAGACCGAGTTGGCCTAAAT+AGG | - | chr4_2:46187349-46187368 | None:intergenic | 45.0% |
CGCGAAAATCGATATGCGTA+AGG | - | chr4_2:46187394-46187413 | None:intergenic | 45.0% | |
TGTCAGCGTCGTTTGATTAG+AGG | + | chr4_2:46187688-46187707 | Msa0602490:intron | 45.0% | |
AGAGATGCTAAGTGCTTCAC+TGG | + | chr4_2:46187723-46187742 | Msa0602490:intron | 45.0% | |
TGTCAAACTCCAACACACGT+CGG | + | chr4_2:46188112-46188131 | Msa0602490:intron | 45.0% | |
ATAACTTAGTAGGGCCGGTT+TGG | - | chr4_2:46188272-46188291 | None:intergenic | 45.0% | |
TTGTTGAGAGGGCTTCAGTT+TGG | + | chr4_2:46188369-46188388 | Msa0602490:intron | 45.0% | |
TGTTGAGAGGGCTTCAGTTT+GGG | + | chr4_2:46188370-46188389 | Msa0602490:intron | 45.0% | |
!!! | TCTCTGGAAGGGGCTTTTTT+CGG | - | chr4_2:46189138-46189157 | None:intergenic | 45.0% |
!! | GATGTATATGGCTGGCTTTG+TGG | + | chr4_2:46189533-46189552 | Msa0602490:intron | 45.0% |
!! | TATATGGCTGGCTTTGTGGT+TGG | + | chr4_2:46189537-46189556 | Msa0602490:intron | 45.0% |
!! | ATATGGCTGGCTTTGTGGTT+GGG | + | chr4_2:46189538-46189557 | Msa0602490:intron | 45.0% |
TGATTGTTCGCCTGAAGAGT+TGG | + | chr4_2:46190162-46190181 | Msa0602490:intron | 45.0% | |
GCAACACTATCCAACTCTTC+AGG | - | chr4_2:46190175-46190194 | None:intergenic | 45.0% | |
! | GGATGGGAAGGTTCAGTTTT+TGG | - | chr4_2:46190276-46190295 | None:intergenic | 45.0% |
CATGATGAACATGGATGGGA+AGG | - | chr4_2:46190288-46190307 | None:intergenic | 45.0% | |
CATATTGAACGAAAGGCCCT+AGG | - | chr4_2:46190791-46190810 | None:intergenic | 45.0% | |
ATGCTCAGCACAAATAGCCA+TGG | - | chr4_2:46190985-46191004 | None:intergenic | 45.0% | |
CGTTTCAGAAGAGAGAGAAC+TGG | + | chr4_2:46191343-46191362 | Msa0602490:CDS | 45.0% | |
TTCAGAAGAGAGAGAACTGG+AGG | + | chr4_2:46191346-46191365 | Msa0602490:CDS | 45.0% | |
TTTGTACAGGAAACGATGCC+TGG | + | chr4_2:46191533-46191552 | Msa0602490:intron | 45.0% | |
!! | ATGTTGTTTCGTGCCACAAG+AGG | + | chr4_2:46191635-46191654 | Msa0602490:CDS | 45.0% |
ACCGGCTGATGAGCAAATTA+TGG | + | chr4_2:46191679-46191698 | Msa0602490:CDS | 45.0% | |
! | GCTAAGCATTTTTACCTCCC+GGG | - | chr4_2:46191975-46191994 | None:intergenic | 45.0% |
!! | ATTGTTTTGTAACACGGGCC+AGG | + | chr4_2:46192025-46192044 | Msa0602490:intron | 45.0% |
!! | TTGTTTTGTAACACGGGCCA+GGG | + | chr4_2:46192026-46192045 | Msa0602490:intron | 45.0% |
AGTAGACTGAGTGGACCTTT+AGG | + | chr4_2:46192327-46192346 | Msa0602490:intron | 45.0% | |
AAGTTGCCTCTAAGTCAGCA+AGG | - | chr4_2:46192728-46192747 | None:intergenic | 45.0% | |
!! | TGCTGACTTAGAGGCAACTT+TGG | + | chr4_2:46192728-46192747 | Msa0602490:CDS | 45.0% |
TTAGAGGCAACTTTGGATGC+TGG | + | chr4_2:46192735-46192754 | Msa0602490:CDS | 45.0% | |
TAGAGGCAACTTTGGATGCT+GGG | + | chr4_2:46192736-46192755 | Msa0602490:CDS | 45.0% | |
CAACTTTGGATGCTGGGATT+AGG | + | chr4_2:46192742-46192761 | Msa0602490:CDS | 45.0% | |
!! | TGGGATTAGGCATCGGAATA+AGG | + | chr4_2:46192755-46192774 | Msa0602490:CDS | 45.0% |
AAGGCTCTATCTTCTGTAGG+AGG | + | chr4_2:46192774-46192793 | Msa0602490:CDS | 45.0% | |
CATCCTTGTCATCTTGTCCT+AGG | + | chr4_2:46192935-46192954 | Msa0602490:intron | 45.0% | |
GTCCTAGGTAAGAAGAGAGA+AGG | + | chr4_2:46192950-46192969 | Msa0602490:intron | 45.0% | |
AGCCTTCTCTCTTCTTACCT+AGG | - | chr4_2:46192955-46192974 | None:intergenic | 45.0% | |
TGACAGCAATTCTCAAGTGG+GGG | + | chr4_2:46193223-46193242 | Msa0602490:CDS | 45.0% | |
CCAGTGCATCCATTGAATGA+AGG | - | chr4_2:46193253-46193272 | None:intergenic | 45.0% | |
CCTTCATTCAATGGATGCAC+TGG | + | chr4_2:46193250-46193269 | Msa0602490:CDS | 45.0% | |
TGAAAGGAAGCTCAGCAATC+AGG | + | chr4_2:46193618-46193637 | Msa0602490:CDS | 45.0% | |
TATGATTTCTGCCAGCGACT+AGG | + | chr4_2:46194034-46194053 | Msa0602490:intron | 45.0% | |
AATGCCGAGATAGTTCATGC+AGG | + | chr4_2:46194188-46194207 | Msa0602490:CDS | 45.0% | |
GACACCTGCATGAACTATCT+CGG | - | chr4_2:46194195-46194214 | None:intergenic | 45.0% | |
GACAGCTGCATGAACTATCT+CGG | - | chr4_2:46194376-46194395 | None:intergenic | 45.0% | |
ACCTGAGTTAACTACCCGTA+TGG | - | chr4_2:46194648-46194667 | None:intergenic | 45.0% | |
ATACGGGTAGTTAACTCAGG+TGG | + | chr4_2:46194647-46194666 | Msa0602490:intron | 45.0% | |
GGTAGTTAACTCAGGTGGTT+GGG | + | chr4_2:46194652-46194671 | Msa0602490:intron | 45.0% | |
TTAACTCAGGTGGTTGGGAT+GGG | + | chr4_2:46194657-46194676 | Msa0602490:intron | 45.0% | |
! | TCAACCATTTTGTCCCACGT+AGG | + | chr4_2:46194705-46194724 | Msa0602490:intron | 45.0% |
CGACAAGTTAAGAGTGGAAC+TGG | - | chr4_2:46194931-46194950 | None:intergenic | 45.0% | |
ACTCGTTTGAATGGCTTCTC+TGG | + | chr4_2:46195120-46195139 | Msa0602490:intron | 45.0% | |
TGTGCATCCCTAATAAGAGG+AGG | - | chr4_2:46195299-46195318 | None:intergenic | 45.0% | |
! | AGAACCATACCCATTTGGTG+TGG | + | chr4_2:46195343-46195362 | Msa0602490:CDS | 45.0% |
TTGGCAGCTCACTGGATATA+AGG | + | chr4_2:46195495-46195514 | Msa0602490:CDS | 45.0% | |
CCCTTCTCATTGTTGTCAAG+TGG | + | chr4_2:46195656-46195675 | Msa0602490:CDS | 45.0% | |
GGTGAGAATGAGTTGTTCTG+GGG | + | chr4_2:46195748-46195767 | Msa0602490:CDS | 45.0% | |
!! | TGGCTCTAATTGCAGTTCCA+TGG | + | chr4_2:46195890-46195909 | Msa0602490:CDS | 45.0% |
AAACACAAGGGAGACAAAGG+AGG | - | chr4_2:46195964-46195983 | None:intergenic | 45.0% | |
GAGGCAAGTAGGGAAAATCA+CGG | - | chr4_2:46196544-46196563 | None:intergenic | 45.0% | |
AGAAAGTCCTGCTACTAGCT+TGG | + | chr4_2:46196651-46196670 | Msa0602490:CDS | 45.0% | |
! | GAAAGTCCTGCTACTAGCTT+GGG | + | chr4_2:46196652-46196671 | Msa0602490:CDS | 45.0% |
! | AAAGTCCTGCTACTAGCTTG+GGG | + | chr4_2:46196653-46196672 | Msa0602490:CDS | 45.0% |
TATGGGATGCACATTGAAGG+GGG | - | chr4_2:46196759-46196778 | None:intergenic | 45.0% | |
CTATGGGATGCACATTGAAG+GGG | - | chr4_2:46196760-46196779 | None:intergenic | 45.0% | |
ACCCTTCCACCGAATACATT+TGG | + | chr4_2:46197475-46197494 | Msa0602490:intron | 45.0% | |
! | GACCAAATGTATTCGGTGGA+AGG | - | chr4_2:46197480-46197499 | None:intergenic | 45.0% |
!! | CATTTGGTCTTTTCGCAGAG+AGG | + | chr4_2:46197491-46197510 | Msa0602490:intron | 45.0% |
TGAACTTGTATCCATCACCG+TGG | - | chr4_2:46198371-46198390 | None:intergenic | 45.0% | |
! | TCATTTTCCCATGGCTATGC+TGG | + | chr4_2:46198595-46198614 | Msa0602490:three_prime_UTR | 45.0% |
!! | GCTTGGACTTTTGAGAAGGT+AGG | + | chr4_2:46198783-46198802 | Msa0602490:three_prime_UTR | 45.0% |
!! | ATAAATATTAGTATAAATAA+AGG | - | chr4_2:46189755-46189774 | None:intergenic | 5.0% |
!! | TTTATAATTGAAAAATATTA+TGG | + | chr4_2:46192685-46192704 | Msa0602490:intron | 5.0% |
! | TGAAGGGTGGTTAGTTACGG+AGG | - | chr4_2:46187159-46187178 | None:intergenic | 50.0% |
CAGAGAGGTTCAATGCCAGT+TGG | - | chr4_2:46188405-46188424 | None:intergenic | 50.0% | |
AAGTTATGCAACAGCGCCGT+GGG | - | chr4_2:46188438-46188457 | None:intergenic | 50.0% | |
AAAGTTATGCAACAGCGCCG+TGG | - | chr4_2:46188439-46188458 | None:intergenic | 50.0% | |
ACGGCGCTGTTGCATAACTT+TGG | + | chr4_2:46188438-46188457 | Msa0602490:intron | 50.0% | |
CTCGTTTGAGCCTAGAGTCT+CGG | + | chr4_2:46188674-46188693 | Msa0602490:intron | 50.0% | |
TTTGAGCCTAGAGTCTCGGT+TGG | + | chr4_2:46188678-46188697 | Msa0602490:intron | 50.0% | |
GTTTACCACCCAGCGAGAAA+AGG | + | chr4_2:46189004-46189023 | Msa0602490:intron | 50.0% | |
! | CAAAACCTTTTCTCGCTGGG+TGG | - | chr4_2:46189012-46189031 | None:intergenic | 50.0% |
!! | TATGGCTGGCTTTGTGGTTG+GGG | + | chr4_2:46189539-46189558 | Msa0602490:intron | 50.0% |
TTCAGGCGAACAATCACTCG+AGG | - | chr4_2:46190158-46190177 | None:intergenic | 50.0% | |
! | GCTACGGTTCCTAATGGATC+AGG | + | chr4_2:46190645-46190664 | Msa0602490:CDS | 50.0% |
TGAACGAAAGGCCCTAGGAT+AGG | - | chr4_2:46190786-46190805 | None:intergenic | 50.0% | |
CATGCTCAGCAAGTTGTGTC+TGG | - | chr4_2:46190866-46190885 | None:intergenic | 50.0% | |
GGGAAAAAAGGGATGCCTCA+AGG | - | chr4_2:46191428-46191447 | None:intergenic | 50.0% | |
ACAAAGGCAAATAACCCGGG+AGG | + | chr4_2:46191958-46191977 | Msa0602490:CDS | 50.0% | |
TGGATGCTGGGATTAGGCAT+CGG | + | chr4_2:46192748-46192767 | Msa0602490:CDS | 50.0% | |
! | AATGTCTTGTTGGAGAGGGC+TGG | + | chr4_2:46193018-46193037 | Msa0602490:CDS | 50.0% |
GTTGCAGTGCATCCTGAATC+TGG | - | chr4_2:46193193-46193212 | None:intergenic | 50.0% | |
GGGGGCAATCCTTCATTCAA+TGG | + | chr4_2:46193241-46193260 | Msa0602490:CDS | 50.0% | |
CATGGAATTTGCCTGCTGCT+TGG | + | chr4_2:46193574-46193593 | Msa0602490:CDS | 50.0% | |
CCATAAAGCTTCCTAGTCGC+TGG | - | chr4_2:46194048-46194067 | None:intergenic | 50.0% | |
CCAGCGACTAGGAAGCTTTA+TGG | + | chr4_2:46194045-46194064 | Msa0602490:intron | 50.0% | |
GCCATACGGGTAGTTAACTC+AGG | + | chr4_2:46194644-46194663 | Msa0602490:intron | 50.0% | |
GGGTAGTTAACTCAGGTGGT+TGG | + | chr4_2:46194651-46194670 | Msa0602490:intron | 50.0% | |
GTTAACTCAGGTGGTTGGGA+TGG | + | chr4_2:46194656-46194675 | Msa0602490:intron | 50.0% | |
! | TGGTTGGGATGGGTAGGTTT+TGG | + | chr4_2:46194667-46194686 | Msa0602490:intron | 50.0% |
! | GGTTGGGATGGGTAGGTTTT+GGG | + | chr4_2:46194668-46194687 | Msa0602490:intron | 50.0% |
GCTACCTACGTGGGACAAAA+TGG | - | chr4_2:46194712-46194731 | None:intergenic | 50.0% | |
TTTGTCCCACGTAGGTAGCT+CGG | + | chr4_2:46194713-46194732 | Msa0602490:intron | 50.0% | |
!! | TAGCTCGGTTGGTGAGCTAA+GGG | + | chr4_2:46194728-46194747 | Msa0602490:intron | 50.0% |
GAGGTTCAGGGTTCAAACCT+TGG | + | chr4_2:46194773-46194792 | Msa0602490:intron | 50.0% | |
CTGGCATAGTTGCACTCTTC+TGG | + | chr4_2:46195139-46195158 | Msa0602490:intron | 50.0% | |
GGATCCACACCAAATGGGTA+TGG | - | chr4_2:46195350-46195369 | None:intergenic | 50.0% | |
AGCTGGGATCCACACCAAAT+GGG | - | chr4_2:46195355-46195374 | None:intergenic | 50.0% | |
TCGTTTCTTTGGCAGCTCAC+TGG | + | chr4_2:46195487-46195506 | Msa0602490:CDS | 50.0% | |
!! | ATGAGTTGTTCTGGGGCCAA+AGG | + | chr4_2:46195755-46195774 | Msa0602490:CDS | 50.0% |
ACCATACTTGGAGTGGCCTT+TGG | - | chr4_2:46195774-46195793 | None:intergenic | 50.0% | |
!! | GGCTTTGGAAAGAGCATCCA+TGG | - | chr4_2:46195910-46195929 | None:intergenic | 50.0% |
!! | TACCTCTGAAGCGGATCTTG+AGG | + | chr4_2:46196369-46196388 | Msa0602490:CDS | 50.0% |
AACCTCAAGATCCGCTTCAG+AGG | - | chr4_2:46196374-46196393 | None:intergenic | 50.0% | |
AGCGGATCTTGAGGTTGAAC+CGG | + | chr4_2:46196378-46196397 | Msa0602490:CDS | 50.0% | |
TGATGTTGCCTGGCAGAATC+CGG | - | chr4_2:46196400-46196419 | None:intergenic | 50.0% | |
TTCTGCCAGGCAACATCAAG+AGG | + | chr4_2:46196402-46196421 | Msa0602490:CDS | 50.0% | |
CAAGTAGGGAAAATCACGGC+TGG | - | chr4_2:46196540-46196559 | None:intergenic | 50.0% | |
TCTGTGACCACTTTGCAGCT+TGG | + | chr4_2:46196598-46196617 | Msa0602490:intron | 50.0% | |
GAATGAGCCAAGCTGCAAAG+TGG | - | chr4_2:46196608-46196627 | None:intergenic | 50.0% | |
! | AAGTCCTGCTACTAGCTTGG+GGG | + | chr4_2:46196654-46196673 | Msa0602490:CDS | 50.0% |
! | ATTCGGTGGAAGGGTGTGTT+TGG | - | chr4_2:46197470-46197489 | None:intergenic | 50.0% |
TTCAACCCAGTGAAGACGCA+GGG | - | chr4_2:46198331-46198350 | None:intergenic | 50.0% | |
ATTCAACCCAGTGAAGACGC+AGG | - | chr4_2:46198332-46198351 | None:intergenic | 50.0% | |
TTCCTTTGCCACCTTAACCG+AGG | + | chr4_2:46198398-46198417 | Msa0602490:CDS | 50.0% | |
ATCCTCGGTTAAGGTGGCAA+AGG | - | chr4_2:46198403-46198422 | None:intergenic | 50.0% | |
! | GGGAACCAATTTGGTGGCTA+TGG | + | chr4_2:46198514-46198533 | Msa0602490:three_prime_UTR | 50.0% |
GACGTCCATAGCCACCAAAT+TGG | - | chr4_2:46198522-46198541 | None:intergenic | 50.0% | |
TGTCACACCAGCATAGCCAT+GGG | - | chr4_2:46198605-46198624 | None:intergenic | 50.0% | |
ATGTCACACCAGCATAGCCA+TGG | - | chr4_2:46198606-46198625 | None:intergenic | 50.0% | |
GACATTTCGACCAACTGTCG+TGG | + | chr4_2:46198621-46198640 | Msa0602490:three_prime_UTR | 50.0% | |
CAGATGACATCCACGACAGT+TGG | - | chr4_2:46198634-46198653 | None:intergenic | 50.0% | |
CTCCAACACACGTCGGAAGT+TGG | + | chr4_2:46188119-46188138 | Msa0602490:intron | 55.0% | |
GTCCAACTTCCGACGTGTGT+TGG | - | chr4_2:46188124-46188143 | None:intergenic | 55.0% | |
TCTCTGTTCACTGCCTCCCA+CGG | + | chr4_2:46188419-46188438 | Msa0602490:intron | 55.0% | |
CCAGATCCAACCGAGACTCT+AGG | - | chr4_2:46188687-46188706 | None:intergenic | 55.0% | |
CCTAGAGTCTCGGTTGGATC+TGG | + | chr4_2:46188684-46188703 | Msa0602490:intron | 55.0% | |
CAGACATTTCACCGGGAGAG+AGG | + | chr4_2:46188775-46188794 | Msa0602490:intron | 55.0% | |
CGATTGAATGCTTGAGGGGC+AGG | + | chr4_2:46190313-46190332 | Msa0602490:intron | 55.0% | |
!! | ATCGCGCCTTGCTGACTTAG+AGG | + | chr4_2:46192719-46192738 | Msa0602490:CDS | 55.0% |
TTGCGGTGATGTTTGGCGAC+TGG | + | chr4_2:46193548-46193567 | Msa0602490:CDS | 55.0% | |
TGCGGTGATGTTTGGCGACT+GGG | + | chr4_2:46193549-46193568 | Msa0602490:CDS | 55.0% | |
ATGTTTGGCGACTGGGGTCA+TGG | + | chr4_2:46193556-46193575 | Msa0602490:CDS | 55.0% | |
! | TTGCCTGCTGCTTGGAGCAT+TGG | + | chr4_2:46193582-46193601 | Msa0602490:CDS | 55.0% |
GAACCAATGCTCCAAGCAGC+AGG | - | chr4_2:46193588-46193607 | None:intergenic | 55.0% | |
!!! | GATGGGTAGGTTTTGGGCAG+AGG | + | chr4_2:46194674-46194693 | Msa0602490:intron | 55.0% |
ACCAACCGAGCTACCTACGT+GGG | - | chr4_2:46194721-46194740 | None:intergenic | 55.0% | |
!! | GTAGCTCGGTTGGTGAGCTA+AGG | + | chr4_2:46194727-46194746 | Msa0602490:intron | 55.0% |
CAGCTGGGATCCACACCAAA+TGG | - | chr4_2:46195356-46195375 | None:intergenic | 55.0% | |
!! | CATTTGGTGTGGATCCCAGC+TGG | + | chr4_2:46195354-46195373 | Msa0602490:CDS | 55.0% |
!! | CAAGTGGTGTACTGGCTCTC+AGG | + | chr4_2:46195672-46195691 | Msa0602490:CDS | 55.0% |
GCCAAAGGCCACTCCAAGTA+TGG | + | chr4_2:46195770-46195789 | Msa0602490:intron | 55.0% | |
AGGTTGAACCGGATTCTGCC+AGG | + | chr4_2:46196389-46196408 | Msa0602490:CDS | 55.0% | |
CTTACCCCCAAGCTAGTAGC+AGG | - | chr4_2:46196661-46196680 | None:intergenic | 55.0% | |
! | GCTACTAGCTTGGGGGTAAG+TGG | + | chr4_2:46196661-46196680 | Msa0602490:intron | 55.0% |
! | TGTAGCTTCTGATGGGTCCC+AGG | + | chr4_2:46197919-46197938 | Msa0602490:intron | 55.0% |
TTCATGCCCTGCGTCTTCAC+TGG | + | chr4_2:46198322-46198341 | Msa0602490:CDS | 55.0% | |
TCATGCCCTGCGTCTTCACT+GGG | + | chr4_2:46198323-46198342 | Msa0602490:CDS | 55.0% | |
! | ATTCGGTGAGCGGACTCAGC+GGG | - | chr4_2:46187321-46187340 | None:intergenic | 60.0% |
!! | GATTCGGTGAGCGGACTCAG+CGG | - | chr4_2:46187322-46187341 | None:intergenic | 60.0% |
GTGGGAGGCAGTGAACAGAG+AGG | - | chr4_2:46188420-46188439 | None:intergenic | 60.0% | |
TTATGCAACAGCGCCGTGGG+AGG | - | chr4_2:46188435-46188454 | None:intergenic | 60.0% | |
ACCGGGAGAGAGGCTGAAAG+TGG | + | chr4_2:46188785-46188804 | Msa0602490:intron | 60.0% | |
CCCACTTTCAGCCTCTCTCC+CGG | - | chr4_2:46188789-46188808 | None:intergenic | 60.0% | |
CCGGGAGAGAGGCTGAAAGT+GGG | + | chr4_2:46188786-46188805 | Msa0602490:intron | 60.0% | |
CGGGAGAGAGGCTGAAAGTG+GGG | + | chr4_2:46188787-46188806 | Msa0602490:intron | 60.0% | |
!! | GCTGGCTTTGTGGTTGGGGT+GGG | + | chr4_2:46189543-46189562 | Msa0602490:intron | 60.0% |
GCTTTGTGGTTGGGGTGGGT+TGG | + | chr4_2:46189547-46189566 | Msa0602490:intron | 60.0% | |
!! | TGGGGTGGGTTGGAGAGCTA+AGG | + | chr4_2:46189557-46189576 | Msa0602490:intron | 60.0% |
GACTGGACCATACTTGGCCC+TGG | - | chr4_2:46192046-46192065 | None:intergenic | 60.0% | |
GCGGTGATGTTTGGCGACTG+GGG | + | chr4_2:46193550-46193569 | Msa0602490:CDS | 60.0% | |
CTCAGGTGGTTGGGATGGGT+AGG | + | chr4_2:46194661-46194680 | Msa0602490:intron | 60.0% | |
TCCCACGTAGGTAGCTCGGT+TGG | + | chr4_2:46194717-46194736 | Msa0602490:intron | 60.0% | |
CACCAACCGAGCTACCTACG+TGG | - | chr4_2:46194722-46194741 | None:intergenic | 60.0% | |
GAACGACTTCCACGCCAGCT+GGG | - | chr4_2:46195371-46195390 | None:intergenic | 60.0% | |
TGAACGACTTCCACGCCAGC+TGG | - | chr4_2:46195372-46195391 | None:intergenic | 60.0% | |
!! | GGCTGGCTTTGTGGTTGGGG+TGG | + | chr4_2:46189542-46189561 | Msa0602490:intron | 65.0% |
ACACGGGCCAGGGCCAAGTA+TGG | + | chr4_2:46192036-46192055 | Msa0602490:intron | 65.0% | |
GGTGTGGATCCCAGCTGGCG+TGG | + | chr4_2:46195359-46195378 | Msa0602490:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 46187106 | 46198933 | 46187106 | ID=Msa0602490;Name=Msa0602490 |
chr4_2 | mRNA | 46187106 | 46198933 | 46187106 | ID=Msa0602490-mRNA-1;Parent=Msa0602490;Name=Msa0602490-mRNA-1;_AED=0.13;_eAED=0.13;_QI=134|1|1|1|1|1|18|502|820 |
chr4_2 | exon | 46187106 | 46187383 | 46187106 | ID=Msa0602490-mRNA-1:exon:10451;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46189128 | 46189172 | 46189128 | ID=Msa0602490-mRNA-1:exon:10452;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46190616 | 46190735 | 46190616 | ID=Msa0602490-mRNA-1:exon:10453;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46190867 | 46190974 | 46190867 | ID=Msa0602490-mRNA-1:exon:10454;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46191308 | 46191421 | 46191308 | ID=Msa0602490-mRNA-1:exon:10455;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46191542 | 46191721 | 46191542 | ID=Msa0602490-mRNA-1:exon:10456;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46191842 | 46191979 | 46191842 | ID=Msa0602490-mRNA-1:exon:10457;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46192714 | 46192821 | 46192714 | ID=Msa0602490-mRNA-1:exon:10458;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46192957 | 46193064 | 46192957 | ID=Msa0602490-mRNA-1:exon:10459;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46193194 | 46193342 | 46193194 | ID=Msa0602490-mRNA-1:exon:10460;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46193486 | 46193639 | 46193486 | ID=Msa0602490-mRNA-1:exon:10461;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46194049 | 46194209 | 46194049 | ID=Msa0602490-mRNA-1:exon:10462;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46195310 | 46195516 | 46195310 | ID=Msa0602490-mRNA-1:exon:10463;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46195603 | 46195786 | 46195603 | ID=Msa0602490-mRNA-1:exon:10464;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46195874 | 46195957 | 46195874 | ID=Msa0602490-mRNA-1:exon:10465;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46196337 | 46196530 | 46196337 | ID=Msa0602490-mRNA-1:exon:10466;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46196616 | 46196675 | 46196616 | ID=Msa0602490-mRNA-1:exon:10467;Parent=Msa0602490-mRNA-1 |
chr4_2 | exon | 46198227 | 46198933 | 46198227 | ID=Msa0602490-mRNA-1:exon:10468;Parent=Msa0602490-mRNA-1 |
chr4_2 | five_prime_UTR | 46187106 | 46187239 | 46187106 | ID=Msa0602490-mRNA-1:five_prime_utr;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46187240 | 46187383 | 46187240 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46189128 | 46189172 | 46189128 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46190616 | 46190735 | 46190616 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46190867 | 46190974 | 46190867 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46191308 | 46191421 | 46191308 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46191542 | 46191721 | 46191542 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46191842 | 46191979 | 46191842 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46192714 | 46192821 | 46192714 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46192957 | 46193064 | 46192957 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46193194 | 46193342 | 46193194 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46193486 | 46193639 | 46193486 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46194049 | 46194209 | 46194049 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46195310 | 46195516 | 46195310 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46195603 | 46195786 | 46195603 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46195874 | 46195957 | 46195874 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46196337 | 46196530 | 46196337 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46196616 | 46196675 | 46196616 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | CDS | 46198227 | 46198431 | 46198227 | ID=Msa0602490-mRNA-1:cds;Parent=Msa0602490-mRNA-1 |
chr4_2 | three_prime_UTR | 46198432 | 46198933 | 46198432 | ID=Msa0602490-mRNA-1:three_prime_utr;Parent=Msa0602490-mRNA-1 |
Gene Sequence |
Protein sequence |