Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0643440 | XP_003606505.2 | 98.902 | 820 | 9 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1684 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0643440 | sp|Q8RWZ7|VHAA1_ARATH | 79.121 | 819 | 165 | 3 | 1 | 815 | 1 | 817 | 0.0 | 1339 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0077560 | Msa0643440 | 0.805285 | 1.437473e-49 | -8.615850e-47 |
Msa0641990 | Msa0643440 | 0.805613 | 1.226664e-49 | -8.615850e-47 |
Msa0643440 | Msa0683240 | 0.836354 | 9.830836e-57 | -8.615850e-47 |
Msa0643440 | Msa0683490 | 0.848894 | 4.581593e-60 | -8.615850e-47 |
Msa0643440 | Msa0709440 | 0.802892 | 4.522058e-49 | -8.615850e-47 |
Msa0643440 | Msa0743440 | 0.805689 | 1.182265e-49 | -8.615850e-47 |
Msa0643440 | Msa0931590 | 0.804584 | 2.014015e-49 | -8.615850e-47 |
Msa0643440 | Msa1084530 | 0.810756 | 9.840937e-51 | -8.615850e-47 |
Msa0643440 | Msa1125820 | 0.807257 | 5.520197e-50 | -8.615850e-47 |
Msa0643440 | Msa1125990 | 0.806194 | 9.259982e-50 | -8.615850e-47 |
Msa0643440 | Msa1171290 | 0.805504 | 1.293123e-49 | -8.615850e-47 |
Msa0643440 | Msa1192570 | 0.808002 | 3.835511e-50 | -8.615850e-47 |
Msa0643440 | Msa1208950 | 0.810019 | 1.419227e-50 | -8.615850e-47 |
Msa0643440 | Msa1387440 | 0.804541 | 2.055972e-49 | -8.615850e-47 |
Msa0643440 | Msa1433860 | 0.809612 | 1.736402e-50 | -8.615850e-47 |
Msa0159590 | Msa0643440 | 0.800288 | 1.546156e-48 | -8.615850e-47 |
Msa0481890 | Msa0643440 | 0.802312 | 5.955472e-49 | -8.615850e-47 |
Msa0602490 | Msa0643440 | 0.809127 | 2.206677e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0643440 | MtrunA17_Chr4g0030121 | 98.902 | 820 | 9 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1684 |
Msa0643440 | MtrunA17_Chr2g0325991 | 86.114 | 821 | 110 | 2 | 1 | 820 | 1 | 818 | 0.0 | 1484 |
Msa0643440 | MtrunA17_Chr4g0035561 | 62.515 | 811 | 301 | 2 | 9 | 819 | 12 | 819 | 0.0 | 1058 |
Msa0643440 | MtrunA17_Chr3g0142161 | 58.921 | 723 | 279 | 3 | 11 | 732 | 1 | 706 | 0.0 | 877 |
Msa0643440 | MtrunA17_Chr3g0142151 | 71.264 | 87 | 25 | 0 | 733 | 819 | 3 | 89 | 3.75e-32 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0643440 | AT2G28520.1 | 79.121 | 819 | 165 | 3 | 1 | 815 | 1 | 817 | 0.0 | 1339 |
Msa0643440 | AT4G39080.1 | 63.424 | 812 | 290 | 5 | 11 | 819 | 14 | 821 | 0.0 | 1069 |
Msa0643440 | AT2G21410.1 | 61.946 | 812 | 301 | 6 | 11 | 819 | 15 | 821 | 0.0 | 1061 |
Find 208 sgRNAs with CRISPR-Local
Find 731 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTGTCTCCCTTGGTTTA+TGG | 0.139820 | 4_3:+46375987 | Msa0643440:three_prime_UTR |
CACTCCATTGAGTTTGTTCT+TGG | 0.159404 | 4_3:+46374016 | Msa0643440:CDS |
TGAAGTTTCTTTAATATAAA+AGG | 0.184942 | 4_3:-46373481 | None:intergenic |
ATCTTCGACTTTGGGCATTA+AGG | 0.218922 | 4_3:+46374062 | Msa0643440:CDS |
AGCTTTATGGAGATGTTATT+TGG | 0.240092 | 4_3:+46371610 | Msa0643440:CDS |
ATAATTTGTGGGAACCAATT+TGG | 0.243283 | 4_3:+46376058 | Msa0643440:three_prime_UTR |
GCATCTACAATTTCTTGATA+TGG | 0.247157 | 4_3:-46370866 | None:intergenic |
ATGAAGATGTCCATTCTATT+TGG | 0.261369 | 4_3:+46372972 | Msa0643440:CDS |
CCAGCGACTAGGAAGCTTTA+TGG | 0.261951 | 4_3:+46371597 | Msa0643440:intron |
TTGACTGAGCAACAAAATTC+TGG | 0.265269 | 4_3:+46376124 | Msa0643440:three_prime_UTR |
CTGAAAATTTGTGAAGCTTT+TGG | 0.275431 | 4_3:+46369450 | Msa0643440:CDS |
TATTTCAATGCTCGTTTCTT+TGG | 0.281066 | 4_3:+46373029 | Msa0643440:CDS |
ATCGCGCCTTGCTGACTTAG+AGG | 0.286780 | 4_3:+46370274 | Msa0643440:CDS |
TTCATGCCCTGCGTCTTCAC+TGG | 0.297238 | 4_3:+46375875 | Msa0643440:CDS |
TTGGCAGCTCACTGGATATA+AGG | 0.301774 | 4_3:+46373048 | Msa0643440:CDS |
CAGCATCATATCTTCGACTT+TGG | 0.306552 | 4_3:+46374053 | Msa0643440:CDS |
AAAACCATCTCAGTTGAAAT+AGG | 0.314216 | 4_3:-46369255 | None:intergenic |
AGATTTCAAGGACGCAATTA+TGG | 0.322855 | 4_3:+46373890 | Msa0643440:CDS |
TCCATCATAGTGTAGCTATT+TGG | 0.323153 | 4_3:+46376300 | Msa0643440:three_prime_UTR |
TTGGTGAGAATGAGTTGTTC+TGG | 0.332655 | 4_3:+46373299 | Msa0643440:CDS |
TTCTTTAATATAAAAGGCTT+TGG | 0.332992 | 4_3:-46373475 | None:intergenic |
CACCGAATCATCACCTATTT+AGG | 0.336677 | 4_3:+46364836 | Msa0643440:CDS |
TGGGATTAGGCATCGGAATA+AGG | 0.347557 | 4_3:+46370310 | Msa0643440:CDS |
TTAAGCCCCTTTGACAATCT+TGG | 0.349079 | 4_3:+46373280 | Msa0643440:CDS |
TAGGAGGTCATTTAGCAAAA+TGG | 0.353163 | 4_3:+46370345 | Msa0643440:CDS |
TTACTTATATCTTCAGGAAC+AGG | 0.356092 | 4_3:-46369486 | None:intergenic |
CTTTATTGACCTGATCCATT+AGG | 0.359465 | 4_3:-46368205 | None:intergenic |
CCTTTCAAACCTGAGAACTT+TGG | 0.360456 | 4_3:-46369163 | None:intergenic |
CTTTGTTTACTTATATCTTC+AGG | 0.370890 | 4_3:-46369492 | None:intergenic |
AGCATCATATCTTCGACTTT+GGG | 0.372911 | 4_3:+46374054 | Msa0643440:CDS |
TTGCCTGCTGCTTGGAGCAT+TGG | 0.373696 | 4_3:+46371134 | Msa0643440:CDS |
ACCGGCTGATGAGCAAATTA+TGG | 0.379432 | 4_3:+46369230 | Msa0643440:CDS |
GAAAGTCCTGCTACTAGCTT+GGG | 0.380018 | 4_3:+46374205 | Msa0643440:CDS |
CAACTTTGGATGCTGGGATT+AGG | 0.380654 | 4_3:+46370297 | Msa0643440:CDS |
ATTGATAAATTTGTCTCCCT+TGG | 0.386275 | 4_3:+46375980 | Msa0643440:exon |
ACCATACTTGGAGTGGCCTT+TGG | 0.387768 | 4_3:-46373324 | None:intergenic |
CAGCTGGGATCCACACCAAA+TGG | 0.388952 | 4_3:-46372906 | None:intergenic |
GCTTGTTCATTTCTCTCCTA+AGG | 0.391719 | 4_3:+46376450 | Msa0643440:three_prime_UTR |
TGCTGACTTAGAGGCAACTT+TGG | 0.394715 | 4_3:+46370283 | Msa0643440:CDS |
TGCGGTGATGTTTGGCGACT+GGG | 0.396749 | 4_3:+46371101 | Msa0643440:CDS |
GCTAAATATGATTAGACCTT+AGG | 0.396885 | 4_3:-46376466 | None:intergenic |
TGTAAATCATTATATGATAA+AGG | 0.396986 | 4_3:-46373252 | None:intergenic |
TTGCGGTGATGTTTGGCGAC+TGG | 0.401761 | 4_3:+46371100 | Msa0643440:CDS |
CCTGGTTAACAAATGTTCTC+TGG | 0.402153 | 4_3:-46366701 | None:intergenic |
GTTAAGGTGGCAAAGGAAAA+AGG | 0.402739 | 4_3:-46375946 | None:intergenic |
CATGGAATTTGCCTGCTGCT+TGG | 0.408029 | 4_3:+46371126 | Msa0643440:CDS |
AATAATTAATAACCGTTTGA+AGG | 0.410169 | 4_3:-46364677 | None:intergenic |
CCCTTCTCATTGTTGTCAAG+TGG | 0.418217 | 4_3:+46373209 | Msa0643440:CDS |
AAGACCGAGTTGGCCTAAAT+AGG | 0.420717 | 4_3:-46364849 | None:intergenic |
AAGAAAGCTACGGTTCCTAA+TGG | 0.421538 | 4_3:+46368190 | Msa0643440:CDS |
TTATAAATCTTAAACCAGAT+TGG | 0.422718 | 4_3:-46369122 | None:intergenic |
TTTGTACAGGAAACGATGCC+TGG | 0.425553 | 4_3:+46369084 | Msa0643440:intron |
GTTCAAAATTGTTCTGCAAA+AGG | 0.425950 | 4_3:+46368504 | Msa0643440:CDS |
TTTGTAAATCCAAAGTTCTC+AGG | 0.426855 | 4_3:+46369154 | Msa0643440:CDS |
CAAGTGGTGTACTGGCTCTC+AGG | 0.427335 | 4_3:+46373225 | Msa0643440:CDS |
ATTGTTGTCAAGTGGTGTAC+TGG | 0.431280 | 4_3:+46373217 | Msa0643440:CDS |
AATCTACAATGAATTCTTCT+CGG | 0.431483 | 4_3:+46371684 | Msa0643440:CDS |
TGAACGACTTCCACGCCAGC+TGG | 0.432096 | 4_3:-46372922 | None:intergenic |
ATAATAGTTGTGTAAACTGC+TGG | 0.436616 | 4_3:-46371063 | None:intergenic |
TCATGCCCTGCGTCTTCACT+GGG | 0.437229 | 4_3:+46375876 | Msa0643440:CDS |
GTTTGAAGGGTGGTTAGTTA+CGG | 0.438617 | 4_3:-46364663 | None:intergenic |
TGGTGAGAATGAGTTGTTCT+GGG | 0.439666 | 4_3:+46373300 | Msa0643440:CDS |
AGCGGATCTTGAGGTTGAAC+CGG | 0.441981 | 4_3:+46373931 | Msa0643440:CDS |
CCATCAAAATCTAACCAATC+TGG | 0.443170 | 4_3:+46369108 | Msa0643440:CDS |
ATGATATTATAGAGATTTCA+AGG | 0.443554 | 4_3:+46373878 | Msa0643440:intron |
CAATCTTATCATTCGGTTAG+TGG | 0.444110 | 4_3:+46375786 | Msa0643440:CDS |
TGAAAGGAAGCTCAGCAATC+AGG | 0.445908 | 4_3:+46371170 | Msa0643440:CDS |
CCTTCATTCAATGGATGCAC+TGG | 0.450088 | 4_3:+46370802 | Msa0643440:CDS |
ATGGATCAGGTCAATAAAGC+TGG | 0.450542 | 4_3:+46368209 | Msa0643440:CDS |
AATCTTATCATTCGGTTAGT+GGG | 0.451403 | 4_3:+46375787 | Msa0643440:CDS |
ATATCAAGCTGCACAACATC+AGG | 0.452449 | 4_3:-46376101 | None:intergenic |
TGATGTTGCCTGGCAGAATC+CGG | 0.452630 | 4_3:-46373950 | None:intergenic |
TGGCTCTAATTGCAGTTCCA+TGG | 0.455979 | 4_3:+46373443 | Msa0643440:CDS |
ATGTTTGGCGACTGGGGTCA+TGG | 0.458466 | 4_3:+46371108 | Msa0643440:CDS |
CCAGAGAACATTTGTTAACC+AGG | 0.459096 | 4_3:+46366701 | Msa0643440:CDS |
TAGAGGCAACTTTGGATGCT+GGG | 0.459606 | 4_3:+46370291 | Msa0643440:CDS |
GACGTCCATAGCCACCAAAT+TGG | 0.470480 | 4_3:-46376072 | None:intergenic |
GATACCCAAATAGACTGTTA+AGG | 0.471115 | 4_3:-46373183 | None:intergenic |
ACTCAATGGAGTGAATCATT+TGG | 0.472059 | 4_3:-46374006 | None:intergenic |
CTGGTTTAAGATTTATAAGC+GGG | 0.472941 | 4_3:+46369127 | Msa0643440:CDS |
TTCTCACCAAGATTGTCAAA+GGG | 0.473262 | 4_3:-46373286 | None:intergenic |
TACAGAGAACCATACCCATT+TGG | 0.473631 | 4_3:+46372891 | Msa0643440:CDS |
CTTACAAGGATATAAAAGAA+TGG | 0.473868 | 4_3:-46376406 | None:intergenic |
TTTCAAAATTAAACCTTACA+AGG | 0.477739 | 4_3:-46376420 | None:intergenic |
CAAGAAATTGTAGATGCATA+CGG | 0.479666 | 4_3:+46370872 | Msa0643440:CDS |
ATTAAAGAAACTTCATAATG+AGG | 0.480131 | 4_3:+46373489 | Msa0643440:CDS |
ATTAGGGATGCACATACTAC+TGG | 0.480874 | 4_3:+46372858 | Msa0643440:intron |
GGTATGACAATCTTATCATT+CGG | 0.482846 | 4_3:+46375779 | Msa0643440:intron |
GGCTTTGGAAAGAGCATCCA+TGG | 0.483435 | 4_3:-46373460 | None:intergenic |
TTAGAGGCAACTTTGGATGC+TGG | 0.483664 | 4_3:+46370290 | Msa0643440:CDS |
AGAAAGTCCTGCTACTAGCT+TGG | 0.483862 | 4_3:+46374204 | Msa0643440:CDS |
CAGTTCTCTCTCTTCTGAAA+CGG | 0.484945 | 4_3:-46368893 | None:intergenic |
TTGAACGAATGTCATCTTCT+CGG | 0.485629 | 4_3:-46364789 | None:intergenic |
CCAGTGCATCCATTGAATGA+AGG | 0.486632 | 4_3:-46370802 | None:intergenic |
GGCCTAAATAGGTGATGATT+CGG | 0.486922 | 4_3:-46364838 | None:intergenic |
CATCTTGAGAGAATTTAGAA+AGG | 0.491820 | 4_3:-46372952 | None:intergenic |
AAACAGAAAACGATAATTTG+TGG | 0.493419 | 4_3:+46376046 | Msa0643440:three_prime_UTR |
CCAAAGTTCTCAGGTTTGAA+AGG | 0.494490 | 4_3:+46369163 | Msa0643440:CDS |
AATAAATTCTACCACGGTGA+TGG | 0.495855 | 4_3:+46375910 | Msa0643440:CDS |
CTTGCAATCAGATACATACT+TGG | 0.497578 | 4_3:+46368253 | Msa0643440:CDS |
TCCGATATTTGCAAAAGCAC+AGG | 0.497930 | 4_3:+46370595 | Msa0643440:CDS |
TATCTGATTGCAAGACAGAA+TGG | 0.498874 | 4_3:-46368244 | None:intergenic |
TTACAAGGATATAAAAGAAT+GGG | 0.499200 | 4_3:-46376405 | None:intergenic |
CGTTTCAGAAGAGAGAGAAC+TGG | 0.499370 | 4_3:+46368894 | Msa0643440:CDS |
TTGGTACAAACAATGTAGCT+TGG | 0.501283 | 4_3:+46376319 | Msa0643440:three_prime_UTR |
GGATCCTATTTCAACTGAGA+TGG | 0.501291 | 4_3:+46369251 | Msa0643440:CDS |
AAATTCCTCATGATGTTGCC+TGG | 0.502941 | 4_3:-46373960 | None:intergenic |
GCTACGGTTCCTAATGGATC+AGG | 0.503423 | 4_3:+46368196 | Msa0643440:CDS |
ACCAAATAGCTACACTATGA+TGG | 0.506451 | 4_3:-46376301 | None:intergenic |
AACAGAAAACGATAATTTGT+GGG | 0.507424 | 4_3:+46376047 | Msa0643440:three_prime_UTR |
GGGAACCAATTTGGTGGCTA+TGG | 0.509683 | 4_3:+46376067 | Msa0643440:three_prime_UTR |
TCGTTTCTTTGGCAGCTCAC+TGG | 0.510044 | 4_3:+46373040 | Msa0643440:CDS |
GACGCACCAAATATGTGAAA+AGG | 0.511111 | 4_3:-46371709 | None:intergenic |
CATTTGGTGTGGATCCCAGC+TGG | 0.512737 | 4_3:+46372907 | Msa0643440:CDS |
GAACCAATGCTCCAAGCAGC+AGG | 0.514977 | 4_3:-46371137 | None:intergenic |
ATTCGGTGAGCGGACTCAGC+GGG | 0.515932 | 4_3:-46364821 | None:intergenic |
ATCTTGAGAGAATTTAGAAA+GGG | 0.517748 | 4_3:-46372951 | None:intergenic |
AGGTTGAACCGGATTCTGCC+AGG | 0.519264 | 4_3:+46373942 | Msa0643440:CDS |
TTATGGAGATGTTATTTGGT+GGG | 0.523066 | 4_3:+46371614 | Msa0643440:CDS |
ATGTACCACACCAAATAGAA+TGG | 0.523321 | 4_3:-46372982 | None:intergenic |
TAACAAATGTTCTCTGGAAG+GGG | 0.525703 | 4_3:-46366695 | None:intergenic |
ATTAATAACCGTTTGAAGGG+TGG | 0.527184 | 4_3:-46364673 | None:intergenic |
TACATACTTGGAGGATATAG+AGG | 0.538894 | 4_3:+46368265 | Msa0643440:CDS |
ATTCTCACCAAGATTGTCAA+AGG | 0.538979 | 4_3:-46373287 | None:intergenic |
AGCTGGGATCCACACCAAAT+GGG | 0.540431 | 4_3:-46372905 | None:intergenic |
TGGTGTGGTACATATGAACT+TGG | 0.541184 | 4_3:+46372992 | Msa0643440:CDS |
TTAACAAATGTTCTCTGGAA+GGG | 0.543625 | 4_3:-46366696 | None:intergenic |
ATAATTAATAACCGTTTGAA+GGG | 0.544184 | 4_3:-46364676 | None:intergenic |
TCCATAATTTGCTCATCAGC+CGG | 0.544690 | 4_3:-46369231 | None:intergenic |
ATATGGATTTGTGAAACTGT+TGG | 0.545071 | 4_3:-46370849 | None:intergenic |
AGAACCAAGAACAAACTCAA+TGG | 0.546926 | 4_3:-46374020 | None:intergenic |
ATTTGTGGGAACCAATTTGG+TGG | 0.550216 | 4_3:+46376061 | Msa0643440:three_prime_UTR |
GCAATCAGATACATACTTGG+AGG | 0.551244 | 4_3:+46368256 | Msa0643440:CDS |
ATGTTTCACCAGCATAGCCA+TGG | 0.552586 | 4_3:-46376156 | None:intergenic |
CTGTTGGTTCTAAAATATGT+AGG | 0.554704 | 4_3:-46370833 | None:intergenic |
GTAACTAACCACCCTTCAAA+CGG | 0.557815 | 4_3:+46364665 | Msa0643440:five_prime_UTR |
TACTTATATCTTCAGGAACA+GGG | 0.558496 | 4_3:-46369485 | None:intergenic |
GGATCCACACCAAATGGGTA+TGG | 0.561377 | 4_3:-46372900 | None:intergenic |
AATAAGGCTCTATCTTCTGT+AGG | 0.561847 | 4_3:+46370326 | Msa0643440:CDS |
GACACCTGCATGAACTATCT+CGG | 0.562857 | 4_3:-46371744 | None:intergenic |
TTTGACAGCAATTCTCAAGT+GGG | 0.564303 | 4_3:+46370773 | Msa0643440:CDS |
ATGAGTTGTTCTGGGGCCAA+AGG | 0.565727 | 4_3:+46373308 | Msa0643440:CDS |
CCACTTGACAACAATGAGAA+GGG | 0.565912 | 4_3:-46373209 | None:intergenic |
GTAAACAAAGGCAAATAACC+CGG | 0.566335 | 4_3:+46369505 | Msa0643440:CDS |
TACCTCTGAAGCGGATCTTG+AGG | 0.567052 | 4_3:+46373922 | Msa0643440:CDS |
AAGAAATTGTAGATGCATAC+GGG | 0.568650 | 4_3:+46370873 | Msa0643440:CDS |
GTTAACAAATGTTCTCTGGA+AGG | 0.571175 | 4_3:-46366697 | None:intergenic |
ATCTGATTGCAAGACAGAAT+GGG | 0.571405 | 4_3:-46368243 | None:intergenic |
ATCACCTATTTAGGCCAACT+CGG | 0.571758 | 4_3:+46364845 | Msa0643440:CDS |
TTTATGGAGATGTTATTTGG+TGG | 0.575690 | 4_3:+46371613 | Msa0643440:CDS |
TATGATTTCTGCCAGCGACT+AGG | 0.579385 | 4_3:+46371586 | Msa0643440:intron |
TGGATGCTGGGATTAGGCAT+CGG | 0.580692 | 4_3:+46370303 | Msa0643440:CDS |
TGGTTCTTATAGCACATGAA+AGG | 0.580897 | 4_3:+46371154 | Msa0643440:CDS |
GAAAAGCATATTGCCTCTTG+TGG | 0.583078 | 4_3:-46369199 | None:intergenic |
GAACGACTTCCACGCCAGCT+GGG | 0.584129 | 4_3:-46372921 | None:intergenic |
TGGATCAGGTCAATAAAGCT+GGG | 0.585348 | 4_3:+46368210 | Msa0643440:CDS |
ATCCTCGGTTAAGGTGGCAA+AGG | 0.586241 | 4_3:-46375953 | None:intergenic |
TTGACAGCAATTCTCAAGTG+GGG | 0.586879 | 4_3:+46370774 | Msa0643440:CDS |
TTCTGCCAGGCAACATCATG+AGG | 0.588694 | 4_3:+46373955 | Msa0643440:CDS |
ATCTTATCATTCGGTTAGTG+GGG | 0.588871 | 4_3:+46375788 | Msa0643440:CDS |
CAGATGACATCCACGACAGT+TGG | 0.589699 | 4_3:-46376184 | None:intergenic |
ATAGGTGATGATTCGGTGAG+CGG | 0.591098 | 4_3:-46364831 | None:intergenic |
AACGAAATTCAATTCAACAA+TGG | 0.592712 | 4_3:+46364724 | Msa0643440:exon |
TGAAGGGTGGTTAGTTACGG+AGG | 0.592747 | 4_3:-46364660 | None:intergenic |
ACCACTTGACAACAATGAGA+AGG | 0.593169 | 4_3:-46373210 | None:intergenic |
TTATGGACAAATATATGCAA+AGG | 0.593509 | 4_3:+46376004 | Msa0643440:three_prime_UTR |
AGGTCATTTAGCAAAATGGA+TGG | 0.593655 | 4_3:+46370349 | Msa0643440:CDS |
GAACGCATGAGATCCATTGA+AGG | 0.595669 | 4_3:-46364767 | None:intergenic |
ATGTTGTTTCGTGCCACAAG+AGG | 0.596841 | 4_3:+46369186 | Msa0643440:CDS |
AACATTTCGACCAACTGTCG+TGG | 0.599117 | 4_3:+46376174 | Msa0643440:three_prime_UTR |
TTCCTTTGCCACCTTAACCG+AGG | 0.599921 | 4_3:+46375951 | Msa0643440:CDS |
TTCAGAAGAGAGAGAACTGG+AGG | 0.604048 | 4_3:+46368897 | Msa0643440:CDS |
TGACAGCAATTCTCAAGTGG+GGG | 0.606342 | 4_3:+46370775 | Msa0643440:CDS |
GTCCTAGGTAAGAAGAGAGA+AGG | 0.607614 | 4_3:+46370502 | Msa0643440:intron |
AACCTCAAGATCCGCTTCAG+AGG | 0.611912 | 4_3:-46373924 | None:intergenic |
AATGTCTTGTTGGAGAGGGC+TGG | 0.614708 | 4_3:+46370570 | Msa0643440:CDS |
AAGGCTCTATCTTCTGTAGG+AGG | 0.618034 | 4_3:+46370329 | Msa0643440:CDS |
CAGAAATGTCAAGAAAGCTA+CGG | 0.623573 | 4_3:+46368180 | Msa0643440:CDS |
TTTCAAAATAAATTCTACCA+CGG | 0.624068 | 4_3:+46375904 | Msa0643440:CDS |
TTCAACCCAGTGAAGACGCA+GGG | 0.627548 | 4_3:-46375881 | None:intergenic |
GAAATTGAAGAAGACCGAGT+TGG | 0.632332 | 4_3:-46364859 | None:intergenic |
ATTCAACCCAGTGAAGACGC+AGG | 0.632811 | 4_3:-46375882 | None:intergenic |
TATATTTGTCCATAAACCAA+GGG | 0.639674 | 4_3:-46375996 | None:intergenic |
ATATATTTGTCCATAAACCA+AGG | 0.640356 | 4_3:-46375997 | None:intergenic |
CTGAAGATATAAGTAAACAA+AGG | 0.646221 | 4_3:+46369493 | Msa0643440:CDS |
TCTGGTTTAAGATTTATAAG+CGG | 0.646579 | 4_3:+46369126 | Msa0643440:CDS |
TAAACAAAGGCAAATAACCC+GGG | 0.647105 | 4_3:+46369506 | Msa0643440:CDS |
TTTAGCAAAATGGATGGACA+TGG | 0.648626 | 4_3:+46370355 | Msa0643440:CDS |
AAAGTCCTGCTACTAGCTTG+GGG | 0.651364 | 4_3:+46374206 | Msa0643440:CDS |
TGTTTCACCAGCATAGCCAT+GGG | 0.651664 | 4_3:-46376155 | None:intergenic |
GCGGTGATGTTTGGCGACTG+GGG | 0.651684 | 4_3:+46371102 | Msa0643440:CDS |
TTGGTTCTAAAATATGTAGG+TGG | 0.652091 | 4_3:-46370830 | None:intergenic |
TGTGCTTAATACCTCTGAAG+CGG | 0.653524 | 4_3:+46373913 | Msa0643440:CDS |
AATGCCGAGATAGTTCATGC+AGG | 0.655608 | 4_3:+46371740 | Msa0643440:CDS |
TCTCACCAAGATTGTCAAAG+GGG | 0.658739 | 4_3:-46373285 | None:intergenic |
GATGTCCATTCTATTTGGTG+TGG | 0.659577 | 4_3:+46372977 | Msa0643440:CDS |
GGTGTGGATCCCAGCTGGCG+TGG | 0.661930 | 4_3:+46372912 | Msa0643440:CDS |
GGTGTGGTACATATGAACTT+GGG | 0.664543 | 4_3:+46372993 | Msa0643440:CDS |
GGTGAGAATGAGTTGTTCTG+GGG | 0.669382 | 4_3:+46373301 | Msa0643440:CDS |
TGAGGAATTTAATTTCAGTG+AGG | 0.676594 | 4_3:+46373973 | Msa0643440:CDS |
AGAACCATACCCATTTGGTG+TGG | 0.678548 | 4_3:+46372896 | Msa0643440:CDS |
TTGCGACGAAGAAAGTGAAG+CGG | 0.679941 | 4_3:+46364620 | Msa0643440:five_prime_UTR |
AAGTTGCCTCTAAGTCAGCA+AGG | 0.680382 | 4_3:-46370280 | None:intergenic |
GATTCGGTGAGCGGACTCAG+CGG | 0.691576 | 4_3:-46364822 | None:intergenic |
AAGTCCTGCTACTAGCTTGG+GGG | 0.696904 | 4_3:+46374207 | Msa0643440:CDS |
CTGTTAAGGAAAATCATCTG+CGG | 0.714419 | 4_3:-46373169 | None:intergenic |
ACAAAGGCAAATAACCCGGG+AGG | 0.743957 | 4_3:+46369509 | Msa0643440:CDS |
TGAACTTGTATCCATCACCG+TGG | 0.780160 | 4_3:-46375921 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTCTAAAATTATCAT+CGG | - | chr4_3:46365149-46365168 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAACCAAATA+TGG | + | chr4_3:46365530-46365549 | Msa0643440:intron | 10.0% |
!!! | TAATTGTATGAAAATATTTT+TGG | - | chr4_3:46367406-46367425 | None:intergenic | 10.0% |
!!! | AATATATTTTAGAGTATTAT+GGG | - | chr4_3:46367997-46368016 | None:intergenic | 10.0% |
!!! | TAATATATTTTAGAGTATTA+TGG | - | chr4_3:46367998-46368017 | None:intergenic | 10.0% |
!! | ATTTAAAAAAATGCATAATT+TGG | + | chr4_3:46369292-46369311 | Msa0643440:intron | 10.0% |
!! | TGAATATTAATTTATGATAA+AGG | - | chr4_3:46369724-46369743 | None:intergenic | 10.0% |
!!! | ATTTGTTTCATTTTTTATTT+AGG | - | chr4_3:46370096-46370115 | None:intergenic | 10.0% |
!! | AAATCAAGAATTTATAAAAT+AGG | - | chr4_3:46374125-46374144 | None:intergenic | 10.0% |
!!! | TATTTTATAAATTCTTGATT+TGG | + | chr4_3:46374124-46374143 | Msa0643440:intron | 10.0% |
!!! | AATTATATTTTGTATACTAT+GGG | - | chr4_3:46374329-46374348 | None:intergenic | 10.0% |
!!! | AAATTATATTTTGTATACTA+TGG | - | chr4_3:46374330-46374349 | None:intergenic | 10.0% |
!! | AAACAAATACAATTAAATGT+TGG | - | chr4_3:46365315-46365334 | None:intergenic | 15.0% |
!! | GTCTAAATAAATCTAAATAA+TGG | + | chr4_3:46365348-46365367 | Msa0643440:intron | 15.0% |
!!! | ACATACAAATTTTTGAAAAT+AGG | + | chr4_3:46365727-46365746 | Msa0643440:intron | 15.0% |
!! | TAATCAAAAATAACTTAGTA+GGG | - | chr4_3:46365830-46365849 | None:intergenic | 15.0% |
!! | ATAATCAAAAATAACTTAGT+AGG | - | chr4_3:46365831-46365850 | None:intergenic | 15.0% |
!! | TTTAACTAATAAATTGAGTA+AGG | - | chr4_3:46366856-46366875 | None:intergenic | 15.0% |
!! | ATTTATTTAATAATCTCATC+AGG | - | chr4_3:46367332-46367351 | None:intergenic | 15.0% |
!!! | TGATTTGTTTTCTTAAATTA+TGG | - | chr4_3:46367942-46367961 | None:intergenic | 15.0% |
!! | TAATTTAAGAAAACAAATCA+TGG | + | chr4_3:46367942-46367961 | Msa0643440:intron | 15.0% |
!! | TAAAATAAAATCGAAAAACT+AGG | - | chr4_3:46369039-46369058 | None:intergenic | 15.0% |
!!! | ACTATAATAATTTTTTGTAC+AGG | + | chr4_3:46369071-46369090 | Msa0643440:intron | 15.0% |
!!! | ATTGTTTTGAACTTTTTTTT+AGG | + | chr4_3:46369371-46369390 | Msa0643440:intron | 15.0% |
!! | GATTGATATTCATATAAATT+GGG | - | chr4_3:46370074-46370093 | None:intergenic | 15.0% |
!! | TTATAAATCATAGTTTCTAT+TGG | - | chr4_3:46370223-46370242 | None:intergenic | 15.0% |
!! | TAATTGAAAAATATAGTCTA+TGG | + | chr4_3:46370240-46370259 | Msa0643440:intron | 15.0% |
!! | TTTCAATTTCAAGATATTAA+AGG | - | chr4_3:46371479-46371498 | None:intergenic | 15.0% |
!! | CTTGAAATTGAAATATATTA+TGG | + | chr4_3:46371486-46371505 | Msa0643440:intron | 15.0% |
!!! | GAAATCATATAGAATTTTTA+GGG | - | chr4_3:46371575-46371594 | None:intergenic | 15.0% |
!!! | AGAAATCATATAGAATTTTT+AGG | - | chr4_3:46371576-46371595 | None:intergenic | 15.0% |
!! | ATGTCAACTATATATATAAA+AGG | - | chr4_3:46372037-46372056 | None:intergenic | 15.0% |
!! | TGTAAATCATTATATGATAA+AGG | - | chr4_3:46373255-46373274 | None:intergenic | 15.0% |
!! | TGAAGTTTCTTTAATATAAA+AGG | - | chr4_3:46373484-46373503 | None:intergenic | 15.0% |
!! | TACATGTAATTAAAAAGTTT+CGG | - | chr4_3:46373574-46373593 | None:intergenic | 15.0% |
!! | AAATTAAATACAACTTCAAT+TGG | + | chr4_3:46373736-46373755 | Msa0643440:intron | 15.0% |
!!! | AATTAAATCCTTTTTTAGAT+AGG | + | chr4_3:46374850-46374869 | Msa0643440:intron | 15.0% |
!!! | ATTAAATCCTTTTTTAGATA+GGG | + | chr4_3:46374851-46374870 | Msa0643440:intron | 15.0% |
!!! | GACAATTATTTTAATCAATT+CGG | + | chr4_3:46375440-46375459 | Msa0643440:intron | 15.0% |
!!! | ACAATTATTTTAATCAATTC+GGG | + | chr4_3:46375441-46375460 | Msa0643440:intron | 15.0% |
!! | AATGATTAAAGATGAAAAAA+TGG | - | chr4_3:46375731-46375750 | None:intergenic | 15.0% |
!!! | TAAGGTTTAATTTTGAAATA+CGG | + | chr4_3:46376425-46376444 | Msa0643440:three_prime_UTR | 15.0% |
!! | ATAATTAATAACCGTTTGAA+GGG | - | chr4_3:46364679-46364698 | None:intergenic | 20.0% |
!! | AATAATTAATAACCGTTTGA+AGG | - | chr4_3:46364680-46364699 | None:intergenic | 20.0% |
!!! | CTGATAATGATAAATTCTAT+TGG | + | chr4_3:46366098-46366117 | Msa0643440:intron | 20.0% |
!! | ATATAAATATCCCAAATTTC+TGG | + | chr4_3:46366532-46366551 | Msa0643440:intron | 20.0% |
!! | AAAATCTCTAATTTAGATGT+TGG | + | chr4_3:46366589-46366608 | Msa0643440:intron | 20.0% |
!! | TTGATATATAATATGGAGAT+TGG | - | chr4_3:46366933-46366952 | None:intergenic | 20.0% |
!!! | CCATCTTTTGATATATAATA+TGG | - | chr4_3:46366940-46366959 | None:intergenic | 20.0% |
!! | CCATATTATATATCAAAAGA+TGG | + | chr4_3:46366937-46366956 | Msa0643440:intron | 20.0% |
!! | TACTATAGTTAGTATTACAT+TGG | - | chr4_3:46367171-46367190 | None:intergenic | 20.0% |
!! | ATATTGATGTGACAATAAAA+TGG | + | chr4_3:46367274-46367293 | Msa0643440:intron | 20.0% |
!!! | GAATTAGAAGTTTTAGTTAT+TGG | - | chr4_3:46367656-46367675 | None:intergenic | 20.0% |
!!! | ATCTGACATTTTTTAATTTG+TGG | + | chr4_3:46368379-46368398 | Msa0643440:intron | 20.0% |
!!! | ATGATAACTATTTTCAAACA+GGG | - | chr4_3:46368629-46368648 | None:intergenic | 20.0% |
!! | TTGAATACAATATCAATTGA+TGG | - | chr4_3:46368737-46368756 | None:intergenic | 20.0% |
!! | GTATATTACATTAAAACAGT+AGG | - | chr4_3:46368783-46368802 | None:intergenic | 20.0% |
!! | TACATAAGAATATAGTTGTA+TGG | + | chr4_3:46368825-46368844 | Msa0643440:intron | 20.0% |
!! | ACATAAGAATATAGTTGTAT+GGG | + | chr4_3:46368826-46368845 | Msa0643440:intron | 20.0% |
!! | TCACAGTAAAAAAATATCAA+GGG | - | chr4_3:46368999-46369018 | None:intergenic | 20.0% |
!! | TTCACAGTAAAAAAATATCA+AGG | - | chr4_3:46369000-46369019 | None:intergenic | 20.0% |
!! | AATTATTATAGTGAACTTAG+AGG | - | chr4_3:46369063-46369082 | None:intergenic | 20.0% |
!! | TTATAAATCTTAAACCAGAT+TGG | - | chr4_3:46369125-46369144 | None:intergenic | 20.0% |
!!! | TATCTGTATTTAGTTTGTTT+TGG | + | chr4_3:46369325-46369344 | Msa0643440:intron | 20.0% |
!!! | TCTTTAATTGTTTTGTAACA+CGG | + | chr4_3:46369570-46369589 | Msa0643440:intron | 20.0% |
!!! | ACTTTTCTAACTTAAACAAT+AGG | - | chr4_3:46369645-46369664 | None:intergenic | 20.0% |
!!! | AGTTTGCAATATCATTTTTT+TGG | + | chr4_3:46369796-46369815 | Msa0643440:intron | 20.0% |
!!! | GTTTGCAATATCATTTTTTT+GGG | + | chr4_3:46369797-46369816 | Msa0643440:intron | 20.0% |
!!! | TTTGCAATATCATTTTTTTG+GGG | + | chr4_3:46369798-46369817 | Msa0643440:intron | 20.0% |
!! | GGATTGATATTCATATAAAT+TGG | - | chr4_3:46370075-46370094 | None:intergenic | 20.0% |
!!! | TTTCTTCCTTTTAAATTTTG+AGG | + | chr4_3:46370654-46370673 | Msa0643440:intron | 20.0% |
!! | ATATAAAACAAAAAGACGAA+TGG | - | chr4_3:46370691-46370710 | None:intergenic | 20.0% |
!!! | TATATTTCTAACTTTGTGAA+AGG | - | chr4_3:46370963-46370982 | None:intergenic | 20.0% |
!! | TTCACAAAGTTAGAAATATA+TGG | + | chr4_3:46370963-46370982 | Msa0643440:intron | 20.0% |
!!! | ATTTTGCCAATATATCATAA+TGG | + | chr4_3:46371237-46371256 | Msa0643440:intron | 20.0% |
!!! | TTTTGCCAATATATCATAAT+GGG | + | chr4_3:46371238-46371257 | Msa0643440:intron | 20.0% |
!!! | TTCTTTACAGTCTATAATTT+TGG | + | chr4_3:46371958-46371977 | Msa0643440:intron | 20.0% |
!! | TGGAATAAAAAAAAATCAAC+TGG | - | chr4_3:46371986-46372005 | None:intergenic | 20.0% |
!! | ATATTTAACACCCATAATTT+AGG | - | chr4_3:46372012-46372031 | None:intergenic | 20.0% |
!!! | ATTTCAGTAAATTTTAAGTC+TGG | - | chr4_3:46372437-46372456 | None:intergenic | 20.0% |
!! | TTCTTTAATATAAAAGGCTT+TGG | - | chr4_3:46373478-46373497 | None:intergenic | 20.0% |
!! | ATTAAAGAAACTTCATAATG+AGG | + | chr4_3:46373489-46373508 | Msa0643440:CDS | 20.0% |
!! | TGATCTTAAAATGGATATTA+GGG | - | chr4_3:46373686-46373705 | None:intergenic | 20.0% |
!! | AAAGAAAACTGATCTTAAAA+TGG | - | chr4_3:46373695-46373714 | None:intergenic | 20.0% |
!!! | ATTTTAAGATCAGTTTTCTT+TGG | + | chr4_3:46373694-46373713 | Msa0643440:intron | 20.0% |
!! | AGAAACAAAAATAATTAGCT+TGG | - | chr4_3:46373762-46373781 | None:intergenic | 20.0% |
!! | ATGATATTATAGAGATTTCA+AGG | + | chr4_3:46373878-46373897 | Msa0643440:intron | 20.0% |
!! | ATTTATAAAATAGGAAACTG+AGG | - | chr4_3:46374116-46374135 | None:intergenic | 20.0% |
!! | ATATAATTTATAGCTGTAGT+TGG | + | chr4_3:46374341-46374360 | Msa0643440:intron | 20.0% |
!! | TATAATTTATAGCTGTAGTT+GGG | + | chr4_3:46374342-46374361 | Msa0643440:intron | 20.0% |
!! | TTAATCTCGTAAAAAATATC+TGG | - | chr4_3:46374668-46374687 | None:intergenic | 20.0% |
!!! | TTAAATCCTTTTTTAGATAG+GGG | + | chr4_3:46374852-46374871 | Msa0643440:intron | 20.0% |
!! | AAGAAAATACATTAACATTG+AGG | - | chr4_3:46375212-46375231 | None:intergenic | 20.0% |
!!! | AAGAAACTGTTTCTTTATAT+AGG | + | chr4_3:46375317-46375336 | Msa0643440:intron | 20.0% |
!!! | AGAAACTGTTTCTTTATATA+GGG | + | chr4_3:46375318-46375337 | Msa0643440:intron | 20.0% |
!! | AATGCTTATATTCATAAAGT+GGG | - | chr4_3:46375543-46375562 | None:intergenic | 20.0% |
!! | AAATGCTTATATTCATAAAG+TGG | - | chr4_3:46375544-46375563 | None:intergenic | 20.0% |
!! | AAAAAACATAGATAAGGTAA+AGG | - | chr4_3:46375703-46375722 | None:intergenic | 20.0% |
!! | GTATTGAAAAAACATAGATA+AGG | - | chr4_3:46375709-46375728 | None:intergenic | 20.0% |
!! | TTTCAAAATAAATTCTACCA+CGG | + | chr4_3:46375904-46375923 | Msa0643440:CDS | 20.0% |
!!! | AATTTATCAATTTTCATCCT+CGG | - | chr4_3:46375971-46375990 | None:intergenic | 20.0% |
!! | TTACAAGGATATAAAAGAAT+GGG | - | chr4_3:46376408-46376427 | None:intergenic | 20.0% |
!! | TTTCAAAATTAAACCTTACA+AGG | - | chr4_3:46376423-46376442 | None:intergenic | 20.0% |
! | AACGAAATTCAATTCAACAA+TGG | + | chr4_3:46364724-46364743 | Msa0643440:exon | 25.0% |
! | TACGAACAACAAACAAAAAA+AGG | - | chr4_3:46364920-46364939 | None:intergenic | 25.0% |
!!! | ATGTTTTTTTCAAACCAAAC+CGG | + | chr4_3:46365804-46365823 | Msa0643440:intron | 25.0% |
!! | TAGGTTCAATAGGATAATTT+TGG | + | chr4_3:46366012-46366031 | Msa0643440:intron | 25.0% |
!!! | AACATGATTATTTTGTTTCC+TGG | + | chr4_3:46366036-46366055 | Msa0643440:intron | 25.0% |
!! | TTTGCCAATTTTTACTTATG+TGG | - | chr4_3:46366145-46366164 | None:intergenic | 25.0% |
!! | ACTTCAATGTTTTCTAATCT+CGG | + | chr4_3:46366291-46366310 | Msa0643440:intron | 25.0% |
!! | ATCATATTACAATAGTTTGC+TGG | + | chr4_3:46366421-46366440 | Msa0643440:intron | 25.0% |
! | TATCAAAAGATGGAAGAAAT+AGG | + | chr4_3:46366947-46366966 | Msa0643440:intron | 25.0% |
! | AAGAAATAGGTTCAAACTTT+AGG | + | chr4_3:46366960-46366979 | Msa0643440:intron | 25.0% |
! | TATGGACATTGACAATAATT+AGG | + | chr4_3:46367052-46367071 | Msa0643440:intron | 25.0% |
! | TATAGTTAGTATTACATTGG+TGG | - | chr4_3:46367168-46367187 | None:intergenic | 25.0% |
! | AAGAAATTAGATAGAAGATG+TGG | + | chr4_3:46367210-46367229 | Msa0643440:intron | 25.0% |
!!! | GTTGAATTCTCAGTTTTAAA+GGG | - | chr4_3:46367487-46367506 | None:intergenic | 25.0% |
!!! | AGTTGAATTCTCAGTTTTAA+AGG | - | chr4_3:46367488-46367507 | None:intergenic | 25.0% |
! | GGTACTAATAATTGTTTGAT+AGG | - | chr4_3:46367635-46367654 | None:intergenic | 25.0% |
!!! | TGATCTTCAGTGAATTTTTT+TGG | + | chr4_3:46367776-46367795 | Msa0643440:intron | 25.0% |
!! | GTATGTCTAAAATAAGATAC+AGG | - | chr4_3:46367914-46367933 | None:intergenic | 25.0% |
! | TCATGGAATATAATGAAGTT+TGG | + | chr4_3:46367959-46367978 | Msa0643440:intron | 25.0% |
!! | GCTATAATAACCAGTATTTT+TGG | + | chr4_3:46368065-46368084 | Msa0643440:intron | 25.0% |
! | TATATCTAGTCCAAAAATAC+TGG | - | chr4_3:46368078-46368097 | None:intergenic | 25.0% |
!! | AAACAAAATGCAGTTGATAT+TGG | - | chr4_3:46368138-46368157 | None:intergenic | 25.0% |
! | AAAGAGAAGTAAAATAGAGA+AGG | - | chr4_3:46368292-46368311 | None:intergenic | 25.0% |
! | ATTACAACATATTGAACGAA+AGG | - | chr4_3:46368349-46368368 | None:intergenic | 25.0% |
!! | CATGATAACTATTTTCAAAC+AGG | - | chr4_3:46368630-46368649 | None:intergenic | 25.0% |
! | AAAAATATCAAGGGGAAAAA+GGG | - | chr4_3:46368990-46369009 | None:intergenic | 25.0% |
! | AAAAAATATCAAGGGGAAAA+AGG | - | chr4_3:46368991-46369010 | None:intergenic | 25.0% |
! | CACAGTAAAAAAATATCAAG+GGG | - | chr4_3:46368998-46369017 | None:intergenic | 25.0% |
!! | TCTGGTTTAAGATTTATAAG+CGG | + | chr4_3:46369126-46369145 | Msa0643440:CDS | 25.0% |
! | AAAACAATGCATAAATTGGT+GGG | - | chr4_3:46369359-46369378 | None:intergenic | 25.0% |
! | GTTCAAAACAATGCATAAAT+TGG | - | chr4_3:46369363-46369382 | None:intergenic | 25.0% |
!! | CTTTGTTTACTTATATCTTC+AGG | - | chr4_3:46369495-46369514 | None:intergenic | 25.0% |
! | CTGAAGATATAAGTAAACAA+AGG | + | chr4_3:46369493-46369512 | Msa0643440:CDS | 25.0% |
! | AAACAATTAAAGAGGAAAAC+AGG | - | chr4_3:46369563-46369582 | None:intergenic | 25.0% |
! | GTGTTACAAAACAATTAAAG+AGG | - | chr4_3:46369571-46369590 | None:intergenic | 25.0% |
!!! | CTTTAATTGTTTTGTAACAC+GGG | + | chr4_3:46369571-46369590 | Msa0643440:intron | 25.0% |
! | TCTAGTCTCTATATAATACA+GGG | + | chr4_3:46369610-46369629 | Msa0643440:intron | 25.0% |
!!! | CCTGTTTTTATATTTACCAA+TGG | - | chr4_3:46369936-46369955 | None:intergenic | 25.0% |
! | CCATTGGTAAATATAAAAAC+AGG | + | chr4_3:46369933-46369952 | Msa0643440:intron | 25.0% |
! | CAAAAACCTTATAAATCCTA+CGG | - | chr4_3:46369969-46369988 | None:intergenic | 25.0% |
! | CCATTGACAATTCTTAATAT+TGG | - | chr4_3:46370144-46370163 | None:intergenic | 25.0% |
! | CCAATATTAAGAATTGTCAA+TGG | + | chr4_3:46370141-46370160 | Msa0643440:intron | 25.0% |
! | AAAATATAGTCTATGGTTAC+AGG | + | chr4_3:46370247-46370266 | Msa0643440:intron | 25.0% |
! | AAAGGAAGAAATAATTACTG+AGG | - | chr4_3:46370645-46370664 | None:intergenic | 25.0% |
!! | TATATTCCCATTTCTTTTTG+CGG | + | chr4_3:46371083-46371102 | Msa0643440:CDS | 25.0% |
! | AATGTAGAAAAATGAAAAGC+TGG | - | chr4_3:46371397-46371416 | None:intergenic | 25.0% |
! | TACCTGATAAACACATAATT+TGG | + | chr4_3:46371418-46371437 | Msa0643440:intron | 25.0% |
! | GGACAAAAACTTATTCTAAA+TGG | - | chr4_3:46371458-46371477 | None:intergenic | 25.0% |
!! | TCACTATTTTCAATGTATTG+TGG | + | chr4_3:46371658-46371677 | Msa0643440:CDS | 25.0% |
!! | CACTATTTTCAATGTATTGT+GGG | + | chr4_3:46371659-46371678 | Msa0643440:CDS | 25.0% |
! | AATCTACAATGAATTCTTCT+CGG | + | chr4_3:46371684-46371703 | Msa0643440:CDS | 25.0% |
! | ATGAAAACATCAACAAGTAA+TGG | - | chr4_3:46371818-46371837 | None:intergenic | 25.0% |
! | AATTTGAATCGTTAACTCAT+TGG | - | chr4_3:46372162-46372181 | None:intergenic | 25.0% |
! | ATTTACTGTAATATGCCATA+CGG | + | chr4_3:46372182-46372201 | Msa0643440:intron | 25.0% |
!!! | TGAATGGAAGAATTAGTTTT+TGG | - | chr4_3:46372389-46372408 | None:intergenic | 25.0% |
! | TCAAAAAGTTCTTCTCATTA+CGG | - | chr4_3:46372508-46372527 | None:intergenic | 25.0% |
! | TTATAACAGTCATAACATAC+AGG | - | chr4_3:46372575-46372594 | None:intergenic | 25.0% |
! | ACCTTCAAATCAATGTAAAT+AGG | + | chr4_3:46372650-46372669 | Msa0643440:intron | 25.0% |
!!! | TCCTATTTACATTGATTTGA+AGG | - | chr4_3:46372654-46372673 | None:intergenic | 25.0% |
!!! | ATTAAATGTTTTTTGTAGCC+AGG | + | chr4_3:46372792-46372811 | Msa0643440:intron | 25.0% |
! | ATCTTGAGAGAATTTAGAAA+GGG | - | chr4_3:46372954-46372973 | None:intergenic | 25.0% |
! | TATCAAAATTATAGCTACAG+GGG | - | chr4_3:46373094-46373113 | None:intergenic | 25.0% |
! | CTATCAAAATTATAGCTACA+GGG | - | chr4_3:46373095-46373114 | None:intergenic | 25.0% |
!! | ATTTTCCTTAACAGTCTATT+TGG | + | chr4_3:46373178-46373197 | Msa0643440:CDS | 25.0% |
!! | TTTTCCTTAACAGTCTATTT+GGG | + | chr4_3:46373179-46373198 | Msa0643440:CDS | 25.0% |
! | ATGAAGAAAAAAACCATACT+TGG | - | chr4_3:46373339-46373358 | None:intergenic | 25.0% |
!!! | AGTATGGTTTTTTTCTTCAT+TGG | + | chr4_3:46373339-46373358 | Msa0643440:intron | 25.0% |
! | ACGATAAAATGAAAACACAA+GGG | - | chr4_3:46373529-46373548 | None:intergenic | 25.0% |
! | AACGATAAAATGAAAACACA+AGG | - | chr4_3:46373530-46373549 | None:intergenic | 25.0% |
! | CTGATCTTAAAATGGATATT+AGG | - | chr4_3:46373687-46373706 | None:intergenic | 25.0% |
! | AATAATCCTCATAAAATCTG+TGG | - | chr4_3:46373844-46373863 | None:intergenic | 25.0% |
! | ATGTAACAAAACATTTCATG+TGG | + | chr4_3:46374497-46374516 | Msa0643440:intron | 25.0% |
! | TGTAACAAAACATTTCATGT+GGG | + | chr4_3:46374498-46374517 | Msa0643440:intron | 25.0% |
! | TTATATACATGTCAGTGTAA+AGG | - | chr4_3:46374831-46374850 | None:intergenic | 25.0% |
! | AATTAACCCCTATCTAAAAA+AGG | - | chr4_3:46374861-46374880 | None:intergenic | 25.0% |
!! | TTCTTTATATAGGGATTAGT+CGG | + | chr4_3:46375327-46375346 | Msa0643440:intron | 25.0% |
! | TTGAACAGACATTGTATTTA+TGG | + | chr4_3:46375379-46375398 | Msa0643440:intron | 25.0% |
! | ATGCTTATATTCATAAAGTG+GGG | - | chr4_3:46375542-46375561 | None:intergenic | 25.0% |
!!! | TTGCTGATTGCAATTTTAAT+AGG | + | chr4_3:46375758-46375777 | Msa0643440:intron | 25.0% |
!! | TGCTTTTATACTACTAATGA+TGG | + | chr4_3:46375834-46375853 | Msa0643440:CDS | 25.0% |
! | TATATTTGTCCATAAACCAA+GGG | - | chr4_3:46375999-46376018 | None:intergenic | 25.0% |
! | ATATATTTGTCCATAAACCA+AGG | - | chr4_3:46376000-46376019 | None:intergenic | 25.0% |
! | TTATGGACAAATATATGCAA+AGG | + | chr4_3:46376004-46376023 | Msa0643440:three_prime_UTR | 25.0% |
! | AAACAGAAAACGATAATTTG+TGG | + | chr4_3:46376046-46376065 | Msa0643440:three_prime_UTR | 25.0% |
!! | AACAGAAAACGATAATTTGT+GGG | + | chr4_3:46376047-46376066 | Msa0643440:three_prime_UTR | 25.0% |
!! | TTCATTTTATCACTTAGAGT+AGG | + | chr4_3:46376232-46376251 | Msa0643440:three_prime_UTR | 25.0% |
! | CTTACAAGGATATAAAAGAA+TGG | - | chr4_3:46376409-46376428 | None:intergenic | 25.0% |
!! | CATTCTTTTATATCCTTGTA+AGG | + | chr4_3:46376407-46376426 | Msa0643440:three_prime_UTR | 25.0% |
! | AATGCTGCATTGTTGAATTT+TGG | + | chr4_3:46365022-46365041 | Msa0643440:intron | 30.0% |
!!! | TTGAATTTTGGAATTTCGTG+CGG | + | chr4_3:46365034-46365053 | Msa0643440:intron | 30.0% |
!! | TGGTTGATGAGTTGATAATT+TGG | + | chr4_3:46365380-46365399 | Msa0643440:intron | 30.0% |
! | TGATTATTTTCTCATGTCAC+TGG | + | chr4_3:46365844-46365863 | Msa0643440:intron | 30.0% |
! | GATTATTTTCTCATGTCACT+GGG | + | chr4_3:46365845-46365864 | Msa0643440:intron | 30.0% |
GTGACCACATAAGTAAAAAT+TGG | + | chr4_3:46366138-46366157 | Msa0643440:intron | 30.0% | |
AAGAACCATCTACATAACAT+AGG | + | chr4_3:46366163-46366182 | Msa0643440:intron | 30.0% | |
ATACTCCTATGTTATGTAGA+TGG | - | chr4_3:46366171-46366190 | None:intergenic | 30.0% | |
! | ACTTTTTGAATCCCACATAT+TGG | - | chr4_3:46366511-46366530 | None:intergenic | 30.0% |
ATCTCTAATTTAGATGTTGG+AGG | + | chr4_3:46366592-46366611 | Msa0643440:intron | 30.0% | |
! | TTAACAAATGTTCTCTGGAA+GGG | - | chr4_3:46366699-46366718 | None:intergenic | 30.0% |
TTCCAAAAAGGAAACAAAGA+GGG | - | chr4_3:46366774-46366793 | None:intergenic | 30.0% | |
ATTCCAAAAAGGAAACAAAG+AGG | - | chr4_3:46366775-46366794 | None:intergenic | 30.0% | |
!! | TCTTTGTTTCCTTTTTGGAA+TGG | + | chr4_3:46366774-46366793 | Msa0643440:intron | 30.0% |
TTATGTTTAGACTTTGTTCG+TGG | + | chr4_3:46366816-46366835 | Msa0643440:intron | 30.0% | |
! | AGGTTCAAACTTTAGGAAAT+AGG | + | chr4_3:46366967-46366986 | Msa0643440:intron | 30.0% |
GAATTAATGCCAACTGAATT+TGG | + | chr4_3:46367020-46367039 | Msa0643440:intron | 30.0% | |
!! | TGAATTTGGTGTATACGATA+TGG | + | chr4_3:46367034-46367053 | Msa0643440:intron | 30.0% |
TGACAATAATTAGGTAGAAG+AGG | + | chr4_3:46367061-46367080 | Msa0643440:intron | 30.0% | |
TAAGGAGTGAAGTGATAAAA+AGG | + | chr4_3:46367125-46367144 | Msa0643440:intron | 30.0% | |
AAGGAGTGAAGTGATAAAAA+GGG | + | chr4_3:46367126-46367145 | Msa0643440:intron | 30.0% | |
TTTAAAGGGTTCATTCTTGA+GGG | - | chr4_3:46367473-46367492 | None:intergenic | 30.0% | |
!! | TTTTAAAGGGTTCATTCTTG+AGG | - | chr4_3:46367474-46367493 | None:intergenic | 30.0% |
TTGACTAAATAGTAGCAAGA+TGG | + | chr4_3:46367519-46367538 | Msa0643440:intron | 30.0% | |
CAAAGAAATCTCTTCTTCAA+TGG | - | chr4_3:46367590-46367609 | None:intergenic | 30.0% | |
CATTGAAGAAGAGATTTCTT+TGG | + | chr4_3:46367588-46367607 | Msa0643440:intron | 30.0% | |
TATTCATGATGAACATGGAT+GGG | - | chr4_3:46367843-46367862 | None:intergenic | 30.0% | |
TTATTCATGATGAACATGGA+TGG | - | chr4_3:46367844-46367863 | None:intergenic | 30.0% | |
ATCGTTATTCATGATGAACA+TGG | - | chr4_3:46367848-46367867 | None:intergenic | 30.0% | |
!!! | CTGCATTTTGTTTTTTTGAC+AGG | + | chr4_3:46368145-46368164 | Msa0643440:intron | 30.0% |
GTTCAAAATTGTTCTGCAAA+AGG | + | chr4_3:46368504-46368523 | Msa0643440:CDS | 30.0% | |
CATCACTTAGCATTAGTTAT+TGG | + | chr4_3:46368661-46368680 | Msa0643440:intron | 30.0% | |
! | GTATATGAGAGAGAGTATAT+AGG | - | chr4_3:46368808-46368827 | None:intergenic | 30.0% |
! | CTGGTTTAAGATTTATAAGC+GGG | + | chr4_3:46369127-46369146 | Msa0643440:CDS | 30.0% |
TTTGTAAATCCAAAGTTCTC+AGG | + | chr4_3:46369154-46369173 | Msa0643440:CDS | 30.0% | |
AAAACCATCTCAGTTGAAAT+AGG | - | chr4_3:46369258-46369277 | None:intergenic | 30.0% | |
CAAAACAATGCATAAATTGG+TGG | - | chr4_3:46369360-46369379 | None:intergenic | 30.0% | |
!!! | TGTTTGTTGTGTTTTTCTCT+GGG | + | chr4_3:46369406-46369425 | Msa0643440:CDS | 30.0% |
! | CTGAAAATTTGTGAAGCTTT+TGG | + | chr4_3:46369450-46369469 | Msa0643440:CDS | 30.0% |
TACTTATATCTTCAGGAACA+GGG | - | chr4_3:46369488-46369507 | None:intergenic | 30.0% | |
TTACTTATATCTTCAGGAAC+AGG | - | chr4_3:46369489-46369508 | None:intergenic | 30.0% | |
! | TATATAATACAGGGCTTTTC+AGG | + | chr4_3:46369619-46369638 | Msa0643440:intron | 30.0% |
!!! | TTATTTTAAGTTGCATGCCA+GGG | + | chr4_3:46369677-46369696 | Msa0643440:intron | 30.0% |
AAGCAAATAAAGAAGACTCT+TGG | - | chr4_3:46369765-46369784 | None:intergenic | 30.0% | |
AAACAACATCAAGAACCTAA+AGG | - | chr4_3:46369896-46369915 | None:intergenic | 30.0% | |
TGAAAACCGTAGGATTTATA+AGG | + | chr4_3:46369960-46369979 | Msa0643440:intron | 30.0% | |
! | CGTAGGATTTATAAGGTTTT+TGG | + | chr4_3:46369967-46369986 | Msa0643440:intron | 30.0% |
!!! | GATTTATAAGGTTTTTGGTC+AGG | + | chr4_3:46369972-46369991 | Msa0643440:intron | 30.0% |
! | AAAAAATGTCTTGTTGGAGA+GGG | + | chr4_3:46370566-46370585 | Msa0643440:CDS | 30.0% |
TGAGGATCAAACAAATTTGA+CGG | - | chr4_3:46370627-46370646 | None:intergenic | 30.0% | |
GCAACTCCTCAAAATTTAAA+AGG | - | chr4_3:46370663-46370682 | None:intergenic | 30.0% | |
!! | TTGGTTCTAAAATATGTAGG+TGG | - | chr4_3:46370833-46370852 | None:intergenic | 30.0% |
!! | CTGTTGGTTCTAAAATATGT+AGG | - | chr4_3:46370836-46370855 | None:intergenic | 30.0% |
ATATGGATTTGTGAAACTGT+TGG | - | chr4_3:46370852-46370871 | None:intergenic | 30.0% | |
GCATCTACAATTTCTTGATA+TGG | - | chr4_3:46370869-46370888 | None:intergenic | 30.0% | |
CAAGAAATTGTAGATGCATA+CGG | + | chr4_3:46370872-46370891 | Msa0643440:CDS | 30.0% | |
AAGAAATTGTAGATGCATAC+GGG | + | chr4_3:46370873-46370892 | Msa0643440:CDS | 30.0% | |
TTTCAATTGTTAACAGCACA+TGG | - | chr4_3:46370989-46371008 | None:intergenic | 30.0% | |
!! | TCCTAACAAGCCATTTTATT+TGG | + | chr4_3:46371012-46371031 | Msa0643440:intron | 30.0% |
ATAATAGTTGTGTAAACTGC+TGG | - | chr4_3:46371066-46371085 | None:intergenic | 30.0% | |
AAGTGTGACACAAATAAAGT+AGG | + | chr4_3:46371205-46371224 | Msa0643440:intron | 30.0% | |
! | TTTTCCATCTGGTGTTTAAT+AGG | + | chr4_3:46371341-46371360 | Msa0643440:intron | 30.0% |
TTTCCATCTGGTGTTTAATA+GGG | + | chr4_3:46371342-46371361 | Msa0643440:intron | 30.0% | |
CACCAAATTATGTGTTTATC+AGG | - | chr4_3:46371423-46371442 | None:intergenic | 30.0% | |
CTGATAAACACATAATTTGG+TGG | + | chr4_3:46371421-46371440 | Msa0643440:intron | 30.0% | |
! | AGCTTTATGGAGATGTTATT+TGG | + | chr4_3:46371610-46371629 | Msa0643440:CDS | 30.0% |
! | TTTATGGAGATGTTATTTGG+TGG | + | chr4_3:46371613-46371632 | Msa0643440:CDS | 30.0% |
! | TTATGGAGATGTTATTTGGT+GGG | + | chr4_3:46371614-46371633 | Msa0643440:CDS | 30.0% |
GACACACTAAATATGTGAAA+CGG | - | chr4_3:46371893-46371912 | None:intergenic | 30.0% | |
TTATTCCATCGCCTAAATTA+TGG | + | chr4_3:46371998-46372017 | Msa0643440:intron | 30.0% | |
TATTCCATCGCCTAAATTAT+GGG | + | chr4_3:46371999-46372018 | Msa0643440:intron | 30.0% | |
TTGAGAACTCTTCTAACTTT+GGG | + | chr4_3:46372082-46372101 | Msa0643440:intron | 30.0% | |
TTTACTGTAATATGCCATAC+GGG | + | chr4_3:46372183-46372202 | Msa0643440:intron | 30.0% | |
! | CCTCGTTCTTAAAACTATTT+TGG | - | chr4_3:46372309-46372328 | None:intergenic | 30.0% |
!!! | CCAAAATAGTTTTAAGAACG+AGG | + | chr4_3:46372306-46372325 | Msa0643440:intron | 30.0% |
! | AGTTGTTATGTTCTTTTCCA+AGG | - | chr4_3:46372345-46372364 | None:intergenic | 30.0% |
!!! | GGAAGAATTAGTTTTTGGAT+AGG | - | chr4_3:46372384-46372403 | None:intergenic | 30.0% |
TCGACAATATCAGATGTATT+TGG | + | chr4_3:46372529-46372548 | Msa0643440:intron | 30.0% | |
!! | AATTGAAGCGCTGTTTATTT+AGG | + | chr4_3:46372600-46372619 | Msa0643440:intron | 30.0% |
!!! | GCACTATTTTGAAGTACAAA+AGG | - | chr4_3:46372736-46372755 | None:intergenic | 30.0% |
CATCTTGAGAGAATTTAGAA+AGG | - | chr4_3:46372955-46372974 | None:intergenic | 30.0% | |
ATGAAGATGTCCATTCTATT+TGG | + | chr4_3:46372972-46372991 | Msa0643440:CDS | 30.0% | |
TATTTCAATGCTCGTTTCTT+TGG | + | chr4_3:46373029-46373048 | Msa0643440:CDS | 30.0% | |
ATCAAAATTATAGCTACAGG+GGG | - | chr4_3:46373093-46373112 | None:intergenic | 30.0% | |
GCTATCAAAATTATAGCTAC+AGG | - | chr4_3:46373096-46373115 | None:intergenic | 30.0% | |
CATTATGTACACATGCTTAT+CGG | + | chr4_3:46373604-46373623 | Msa0643440:intron | 30.0% | |
! | TGAGGAATTTAATTTCAGTG+AGG | + | chr4_3:46373973-46373992 | Msa0643440:CDS | 30.0% |
AACACCATATCAAAGGTTAT+AGG | - | chr4_3:46374240-46374259 | None:intergenic | 30.0% | |
GTTTGAAAACACCATATCAA+AGG | - | chr4_3:46374247-46374266 | None:intergenic | 30.0% | |
! | TATGGTGTTTTCAAACTCTA+TGG | + | chr4_3:46374251-46374270 | Msa0643440:intron | 30.0% |
TATCATGCAATGCTAGATAA+AGG | + | chr4_3:46374374-46374393 | Msa0643440:intron | 30.0% | |
TTGAAAGTCAAACATATGAG+TGG | - | chr4_3:46374741-46374760 | None:intergenic | 30.0% | |
!!! | GTAAAGGTTTTTTACACTGT+CGG | - | chr4_3:46374815-46374834 | None:intergenic | 30.0% |
!! | AGAGAAATATGATGGATTTG+AGG | - | chr4_3:46374951-46374970 | None:intergenic | 30.0% |
GTGAGAAAAGAGAAATATGA+TGG | - | chr4_3:46374959-46374978 | None:intergenic | 30.0% | |
! | TTTTATCATGTGACCTTAAG+AGG | + | chr4_3:46375076-46375095 | Msa0643440:intron | 30.0% |
GTTATTTGAAGATACTCTTG+TGG | + | chr4_3:46375158-46375177 | Msa0643440:intron | 30.0% | |
TTGAGATTGAAGTACGAAAT+GGG | + | chr4_3:46375267-46375286 | Msa0643440:intron | 30.0% | |
! | GTATTTATGGTTTGTGTTTG+TGG | + | chr4_3:46375392-46375411 | Msa0643440:intron | 30.0% |
CACTATTGTCAATAGATTTC+TGG | + | chr4_3:46375415-46375434 | Msa0643440:intron | 30.0% | |
TGCATAGTTATATCTTGACA+AGG | - | chr4_3:46375505-46375524 | None:intergenic | 30.0% | |
TAAAGTGGGGAAATTGAAAT+TGG | - | chr4_3:46375529-46375548 | None:intergenic | 30.0% | |
ATAAGCATTTCGTTTGTCTA+TGG | + | chr4_3:46375554-46375573 | Msa0643440:intron | 30.0% | |
TAAGCATTTCGTTTGTCTAT+GGG | + | chr4_3:46375555-46375574 | Msa0643440:intron | 30.0% | |
! | ATGTATCCACTCTTTTATTG+AGG | + | chr4_3:46375639-46375658 | Msa0643440:intron | 30.0% |
AAAGGAATGCAAACATAGAT+GGG | - | chr4_3:46375685-46375704 | None:intergenic | 30.0% | |
TAAAGGAATGCAAACATAGA+TGG | - | chr4_3:46375686-46375705 | None:intergenic | 30.0% | |
GGTATGACAATCTTATCATT+CGG | + | chr4_3:46375779-46375798 | Msa0643440:intron | 30.0% | |
AATCTTATCATTCGGTTAGT+GGG | + | chr4_3:46375787-46375806 | Msa0643440:CDS | 30.0% | |
ATTGATAAATTTGTCTCCCT+TGG | + | chr4_3:46375980-46375999 | Msa0643440:exon | 30.0% | |
! | ATAATTTGTGGGAACCAATT+TGG | + | chr4_3:46376058-46376077 | Msa0643440:three_prime_UTR | 30.0% |
ATTAATAACCGTTTGAAGGG+TGG | - | chr4_3:46364676-46364695 | None:intergenic | 35.0% | |
CACAGAAAAACTACCTTCAA+TGG | + | chr4_3:46364754-46364773 | Msa0643440:CDS | 35.0% | |
TTGAACGAATGTCATCTTCT+CGG | - | chr4_3:46364792-46364811 | None:intergenic | 35.0% | |
!! | TGGTGTTGTTTGAATTGTGT+GGG | + | chr4_3:46364965-46364984 | Msa0643440:intron | 35.0% |
!!! | TGAATTTTGGAATTTCGTGC+GGG | + | chr4_3:46365035-46365054 | Msa0643440:intron | 35.0% |
CTAAATAATGGTGTGAGAGT+TGG | + | chr4_3:46365360-46365379 | Msa0643440:intron | 35.0% | |
TACGTTGCATGCTAAATGTT+TGG | + | chr4_3:46365428-46365447 | Msa0643440:intron | 35.0% | |
! | ACGTGCATCTTTGAAAACAT+AGG | - | chr4_3:46365507-46365526 | None:intergenic | 35.0% |
TCTATGCATGAGTCCATATT+TGG | - | chr4_3:46365546-46365565 | None:intergenic | 35.0% | |
CAAAAATAACTTAGTAGGGC+CGG | - | chr4_3:46365826-46365845 | None:intergenic | 35.0% | |
!! | TTTCAAGTTCTTGGTGAAGA+TGG | + | chr4_3:46365869-46365888 | Msa0643440:intron | 35.0% |
! | TTCAAGTTCTTGGTGAAGAT+GGG | + | chr4_3:46365870-46365889 | Msa0643440:intron | 35.0% |
!! | TCCTTGTTTAACTTGTTGAG+AGG | + | chr4_3:46365906-46365925 | Msa0643440:intron | 35.0% |
!! | CCTTGTTTAACTTGTTGAGA+GGG | + | chr4_3:46365907-46365926 | Msa0643440:intron | 35.0% |
! | AACTTTGGTGTAGGTTCAAT+AGG | + | chr4_3:46366002-46366021 | Msa0643440:intron | 35.0% |
!! | GTATAGTTAAAGTGCTGTAC+AGG | + | chr4_3:46366187-46366206 | Msa0643440:intron | 35.0% |
GATCTGGATCTCAATATTTC+AGG | + | chr4_3:46366249-46366268 | Msa0643440:intron | 35.0% | |
TATTCTCTCAGACATTTCAC+CGG | + | chr4_3:46366316-46366335 | Msa0643440:intron | 35.0% | |
!! | TATTACAATAGTTTGCTGGC+TGG | + | chr4_3:46366425-46366444 | Msa0643440:intron | 35.0% |
TGAATATTTCCTAACTCGCA+TGG | - | chr4_3:46366461-46366480 | None:intergenic | 35.0% | |
! | TTTTGAATCCCACATATTGG+CGG | - | chr4_3:46366508-46366527 | None:intergenic | 35.0% |
! | TAACAAATGTTCTCTGGAAG+GGG | - | chr4_3:46366698-46366717 | None:intergenic | 35.0% |
GTTAACAAATGTTCTCTGGA+AGG | - | chr4_3:46366700-46366719 | None:intergenic | 35.0% | |
!! | TTAATGCAGTGTTGATTACC+TGG | - | chr4_3:46366722-46366741 | None:intergenic | 35.0% |
CATGTGTTACCATTCCAAAA+AGG | - | chr4_3:46366786-46366805 | None:intergenic | 35.0% | |
TTTAGACTTTGTTCGTGGTT+GGG | + | chr4_3:46366821-46366840 | Msa0643440:intron | 35.0% | |
! | GGCATTAATTCTAGAAAGAG+AGG | - | chr4_3:46367011-46367030 | None:intergenic | 35.0% |
TCGTATACACCAAATTCAGT+TGG | - | chr4_3:46367032-46367051 | None:intergenic | 35.0% | |
TAGGTAGAAGAGGATGTATA+TGG | + | chr4_3:46367071-46367090 | Msa0643440:intron | 35.0% | |
TAGAAGAGGATGTATATGGT+TGG | + | chr4_3:46367075-46367094 | Msa0643440:intron | 35.0% | |
TGAAGTGATAAAAAGGGAGT+GGG | + | chr4_3:46367132-46367151 | Msa0643440:intron | 35.0% | |
TTAAAGGGTTCATTCTTGAG+GGG | - | chr4_3:46367472-46367491 | None:intergenic | 35.0% | |
TTCCAACCAACTCTTCTAAA+AGG | - | chr4_3:46367557-46367576 | None:intergenic | 35.0% | |
AAATCTCTTCTTCAATGGCA+AGG | - | chr4_3:46367585-46367604 | None:intergenic | 35.0% | |
TCAACAAATCTCTTCTTCCT+TGG | - | chr4_3:46367753-46367772 | None:intergenic | 35.0% | |
AATAACGATTGCATGCTTGA+GGG | + | chr4_3:46367859-46367878 | Msa0643440:intron | 35.0% | |
! | TAGAGTATTATGGGTGATCT+TGG | - | chr4_3:46367988-46368007 | None:intergenic | 35.0% |
CAGAAATGTCAAGAAAGCTA+CGG | + | chr4_3:46368180-46368199 | Msa0643440:CDS | 35.0% | |
CTTTATTGACCTGATCCATT+AGG | - | chr4_3:46368208-46368227 | None:intergenic | 35.0% | |
ATCTGATTGCAAGACAGAAT+GGG | - | chr4_3:46368246-46368265 | None:intergenic | 35.0% | |
TATCTGATTGCAAGACAGAA+TGG | - | chr4_3:46368247-46368266 | None:intergenic | 35.0% | |
CTTGCAATCAGATACATACT+TGG | + | chr4_3:46368253-46368272 | Msa0643440:CDS | 35.0% | |
TACATACTTGGAGGATATAG+AGG | + | chr4_3:46368265-46368284 | Msa0643440:CDS | 35.0% | |
TATGATCATTGTCCTATCCT+AGG | + | chr4_3:46368322-46368341 | Msa0643440:intron | 35.0% | |
ATGATCATTGTCCTATCCTA+GGG | + | chr4_3:46368323-46368342 | Msa0643440:intron | 35.0% | |
! | GCAGAACAATTTTGAACTCA+AGG | - | chr4_3:46368501-46368520 | None:intergenic | 35.0% |
!!! | TCTGCAAAAGGTATTTTCCA+TGG | + | chr4_3:46368516-46368535 | Msa0643440:intron | 35.0% |
! | CCTAAATAACAGAGAGCATA+TGG | - | chr4_3:46368592-46368611 | None:intergenic | 35.0% |
! | CCATATGCTCTCTGTTATTT+AGG | + | chr4_3:46368589-46368608 | Msa0643440:intron | 35.0% |
! | TATGAGAGAGAGTATATAGG+AGG | - | chr4_3:46368805-46368824 | None:intergenic | 35.0% |
TAGTTGTATGGGCATATTTC+AGG | + | chr4_3:46368837-46368856 | Msa0643440:intron | 35.0% | |
GGAACCTGTTCAAACAAAAA+TGG | - | chr4_3:46368958-46368977 | None:intergenic | 35.0% | |
!! | CCAGATTGGTTAGATTTTGA+TGG | - | chr4_3:46369111-46369130 | None:intergenic | 35.0% |
CCATCAAAATCTAACCAATC+TGG | + | chr4_3:46369108-46369127 | Msa0643440:CDS | 35.0% | |
! | AGGCAATATGCTTTTCAATC+AGG | + | chr4_3:46369206-46369225 | Msa0643440:CDS | 35.0% |
!!! | GTGTTTGTTGTGTTTTTCTC+TGG | + | chr4_3:46369405-46369424 | Msa0643440:CDS | 35.0% |
!!! | GTTTGTTGTGTTTTTCTCTG+GGG | + | chr4_3:46369407-46369426 | Msa0643440:CDS | 35.0% |
GTAAACAAAGGCAAATAACC+CGG | + | chr4_3:46369505-46369524 | Msa0643440:CDS | 35.0% | |
TAAACAAAGGCAAATAACCC+GGG | + | chr4_3:46369506-46369525 | Msa0643440:CDS | 35.0% | |
!!! | GTTATTTTAAGTTGCATGCC+AGG | + | chr4_3:46369676-46369695 | Msa0643440:intron | 35.0% |
ATTGCTGATACTGATATTGC+TGG | - | chr4_3:46369833-46369852 | None:intergenic | 35.0% | |
GAGAAAAATAGTAGACTGAG+TGG | + | chr4_3:46369869-46369888 | Msa0643440:intron | 35.0% | |
!!! | AAGGTTTTTGGTCAGGAAAT+TGG | + | chr4_3:46369979-46369998 | Msa0643440:intron | 35.0% |
AATAAGGCTCTATCTTCTGT+AGG | + | chr4_3:46370326-46370345 | Msa0643440:CDS | 35.0% | |
TAGGAGGTCATTTAGCAAAA+TGG | + | chr4_3:46370345-46370364 | Msa0643440:CDS | 35.0% | |
AGGTCATTTAGCAAAATGGA+TGG | + | chr4_3:46370349-46370368 | Msa0643440:CDS | 35.0% | |
TTTAGCAAAATGGATGGACA+TGG | + | chr4_3:46370355-46370374 | Msa0643440:CDS | 35.0% | |
CGTAAAAACCTTAGACAAGA+AGG | - | chr4_3:46370401-46370420 | None:intergenic | 35.0% | |
GTCACCAAAAAATGTCTTGT+TGG | + | chr4_3:46370560-46370579 | Msa0643440:CDS | 35.0% | |
!!! | CTCTCCAACAAGACATTTTT+TGG | - | chr4_3:46370567-46370586 | None:intergenic | 35.0% |
! | CAAAAAATGTCTTGTTGGAG+AGG | + | chr4_3:46370565-46370584 | Msa0643440:CDS | 35.0% |
! | ACCTGTGCTTTTGCAAATAT+CGG | - | chr4_3:46370599-46370618 | None:intergenic | 35.0% |
! | TCTTCTGATTTTCCAGATTC+AGG | + | chr4_3:46370730-46370749 | Msa0643440:intron | 35.0% |
! | TTTTGACAGCAATTCTCAAG+TGG | + | chr4_3:46370772-46370791 | Msa0643440:CDS | 35.0% |
TTTGACAGCAATTCTCAAGT+GGG | + | chr4_3:46370773-46370792 | Msa0643440:CDS | 35.0% | |
!! | GCCAAATAAAATGGCTTGTT+AGG | - | chr4_3:46371016-46371035 | None:intergenic | 35.0% |
TGCAACACTGCCAAATAAAA+TGG | - | chr4_3:46371025-46371044 | None:intergenic | 35.0% | |
ACATCACCGCAAAAAGAAAT+GGG | - | chr4_3:46371092-46371111 | None:intergenic | 35.0% | |
AACATCACCGCAAAAAGAAA+TGG | - | chr4_3:46371093-46371112 | None:intergenic | 35.0% | |
! | TTTCTTTTTGCGGTGATGTT+TGG | + | chr4_3:46371093-46371112 | Msa0643440:CDS | 35.0% |
TGGTTCTTATAGCACATGAA+AGG | + | chr4_3:46371154-46371173 | Msa0643440:CDS | 35.0% | |
TGACACAAATAAAGTAGGCA+TGG | + | chr4_3:46371210-46371229 | Msa0643440:intron | 35.0% | |
ACAAATAAAGTAGGCATGGA+AGG | + | chr4_3:46371214-46371233 | Msa0643440:intron | 35.0% | |
TGAGGCCCATTATGATATAT+TGG | - | chr4_3:46371246-46371265 | None:intergenic | 35.0% | |
CATAATAGATGTCACATGTG+AGG | - | chr4_3:46371264-46371283 | None:intergenic | 35.0% | |
CTCACATGTGACATCTATTA+TGG | + | chr4_3:46371262-46371281 | Msa0643440:intron | 35.0% | |
! | ATCATGCTTCTTTTTCCATC+TGG | + | chr4_3:46371330-46371349 | Msa0643440:intron | 35.0% |
ATTTACCTATGTTCTGCTCT+TGG | + | chr4_3:46371539-46371558 | Msa0643440:intron | 35.0% | |
! | TCGGTTCCTTTTCACATATT+TGG | + | chr4_3:46371703-46371722 | Msa0643440:CDS | 35.0% |
GTTGAGAACTCTTCTAACTT+TGG | + | chr4_3:46372081-46372100 | Msa0643440:intron | 35.0% | |
!!! | TAGTTTTAAGAACGAGGTTC+AGG | + | chr4_3:46372312-46372331 | Msa0643440:intron | 35.0% |
!!! | AGTTTTAAGAACGAGGTTCA+GGG | + | chr4_3:46372313-46372332 | Msa0643440:intron | 35.0% |
AGTCATCAACATGACATGAA+TGG | - | chr4_3:46372405-46372424 | None:intergenic | 35.0% | |
! | AAGCGCTGTTTATTTAGGAT+TGG | + | chr4_3:46372605-46372624 | Msa0643440:intron | 35.0% |
GTAAATAGGACTCGTTTGAA+TGG | + | chr4_3:46372664-46372683 | Msa0643440:intron | 35.0% | |
TTGTTCTCCTCCTCTTATTA+GGG | + | chr4_3:46372842-46372861 | Msa0643440:intron | 35.0% | |
ATGTACCACACCAAATAGAA+TGG | - | chr4_3:46372985-46373004 | None:intergenic | 35.0% | |
CTGTTAAGGAAAATCATCTG+CGG | - | chr4_3:46373172-46373191 | None:intergenic | 35.0% | |
GATACCCAAATAGACTGTTA+AGG | - | chr4_3:46373186-46373205 | None:intergenic | 35.0% | |
TTCTCACCAAGATTGTCAAA+GGG | - | chr4_3:46373289-46373308 | None:intergenic | 35.0% | |
ATTCTCACCAAGATTGTCAA+AGG | - | chr4_3:46373290-46373309 | None:intergenic | 35.0% | |
GAAAAAAACCATACTTGGAG+TGG | - | chr4_3:46373334-46373353 | None:intergenic | 35.0% | |
AATTACTGCTCATGATATGC+AGG | + | chr4_3:46373405-46373424 | Msa0643440:intron | 35.0% | |
! | TCAACAAAAGCACAGAACAA+AGG | - | chr4_3:46373797-46373816 | None:intergenic | 35.0% |
! | GGCATTGCTTTGTTAATAAC+TGG | - | chr4_3:46373823-46373842 | None:intergenic | 35.0% |
AGATTTCAAGGACGCAATTA+TGG | + | chr4_3:46373890-46373909 | Msa0643440:CDS | 35.0% | |
ACTCAATGGAGTGAATCATT+TGG | - | chr4_3:46374009-46374028 | None:intergenic | 35.0% | |
AGAACCAAGAACAAACTCAA+TGG | - | chr4_3:46374023-46374042 | None:intergenic | 35.0% | |
AGCATCATATCTTCGACTTT+GGG | + | chr4_3:46374054-46374073 | Msa0643440:CDS | 35.0% | |
ACACAGAAGATAGTGTAAAC+AGG | - | chr4_3:46374284-46374303 | None:intergenic | 35.0% | |
ATGCAATGCTAGATAAAGGA+TGG | + | chr4_3:46374378-46374397 | Msa0643440:intron | 35.0% | |
!! | GATGGATTTGAGGTATTGTA+TGG | - | chr4_3:46374941-46374960 | None:intergenic | 35.0% |
GAAATTGTGAAGAGAGAAAC+AGG | - | chr4_3:46374993-46375012 | None:intergenic | 35.0% | |
AAAAGACCAAATGTATTCGG+TGG | - | chr4_3:46375037-46375056 | None:intergenic | 35.0% | |
GCGAAAAGACCAAATGTATT+CGG | - | chr4_3:46375040-46375059 | None:intergenic | 35.0% | |
TTTGAAGATACTCTTGTGGT+TGG | + | chr4_3:46375162-46375181 | Msa0643440:intron | 35.0% | |
GTTGAGATTGAAGTACGAAA+TGG | + | chr4_3:46375266-46375285 | Msa0643440:intron | 35.0% | |
AAGTACGAAATGGGTATCAT+TGG | + | chr4_3:46375276-46375295 | Msa0643440:intron | 35.0% | |
TAGATTAGTGTAGCTTCTGA+TGG | + | chr4_3:46375464-46375483 | Msa0643440:intron | 35.0% | |
AGATTAGTGTAGCTTCTGAT+GGG | + | chr4_3:46375465-46375484 | Msa0643440:intron | 35.0% | |
CTTGACAAGGTAAAATTCCT+GGG | - | chr4_3:46375492-46375511 | None:intergenic | 35.0% | |
TCTTGACAAGGTAAAATTCC+TGG | - | chr4_3:46375493-46375512 | None:intergenic | 35.0% | |
AAGCATTTCGTTTGTCTATG+GGG | + | chr4_3:46375556-46375575 | Msa0643440:intron | 35.0% | |
AAGAGTGGATACATGATAAC+AGG | - | chr4_3:46375633-46375652 | None:intergenic | 35.0% | |
AAGACACCTCAATAAAAGAG+TGG | - | chr4_3:46375648-46375667 | None:intergenic | 35.0% | |
CAATCTTATCATTCGGTTAG+TGG | + | chr4_3:46375786-46375805 | Msa0643440:CDS | 35.0% | |
ATCTTATCATTCGGTTAGTG+GGG | + | chr4_3:46375788-46375807 | Msa0643440:CDS | 35.0% | |
AATAAATTCTACCACGGTGA+TGG | + | chr4_3:46375910-46375929 | Msa0643440:CDS | 35.0% | |
! | TCAATTTTCATCCTCGGTTA+AGG | - | chr4_3:46375965-46375984 | None:intergenic | 35.0% |
AATTTGTCTCCCTTGGTTTA+TGG | + | chr4_3:46375987-46376006 | Msa0643440:three_prime_UTR | 35.0% | |
TTGACTGAGCAACAAAATTC+TGG | + | chr4_3:46376124-46376143 | Msa0643440:three_prime_UTR | 35.0% | |
TCCATCATAGTGTAGCTATT+TGG | + | chr4_3:46376300-46376319 | Msa0643440:three_prime_UTR | 35.0% | |
ACCAAATAGCTACACTATGA+TGG | - | chr4_3:46376304-46376323 | None:intergenic | 35.0% | |
TTGGTACAAACAATGTAGCT+TGG | + | chr4_3:46376319-46376338 | Msa0643440:three_prime_UTR | 35.0% | |
! | GTTTGAAGGGTGGTTAGTTA+CGG | - | chr4_3:46364666-46364685 | None:intergenic | 40.0% |
GTAACTAACCACCCTTCAAA+CGG | + | chr4_3:46364665-46364684 | Msa0643440:five_prime_UTR | 40.0% | |
CACCGAATCATCACCTATTT+AGG | + | chr4_3:46364836-46364855 | Msa0643440:CDS | 40.0% | |
GGCCTAAATAGGTGATGATT+CGG | - | chr4_3:46364841-46364860 | None:intergenic | 40.0% | |
ATCACCTATTTAGGCCAACT+CGG | + | chr4_3:46364845-46364864 | Msa0643440:CDS | 40.0% | |
GAAATTGAAGAAGACCGAGT+TGG | - | chr4_3:46364862-46364881 | None:intergenic | 40.0% | |
GAATGCGTTGAATGTGTTTG+TGG | + | chr4_3:46364945-46364964 | Msa0643440:intron | 40.0% | |
!! | GTGGTGTTGTTTGAATTGTG+TGG | + | chr4_3:46364964-46364983 | Msa0643440:intron | 40.0% |
! | GCTTGTCGTGTTTGTTGATT+TGG | + | chr4_3:46365090-46365109 | Msa0643440:intron | 40.0% |
AACACCTCTAATCAAAGGTG+TGG | - | chr4_3:46365240-46365259 | None:intergenic | 40.0% | |
GCACTAACACCTCTAATCAA+AGG | - | chr4_3:46365245-46365264 | None:intergenic | 40.0% | |
AGTTGGACACAACTTCAATC+TGG | + | chr4_3:46365681-46365700 | Msa0643440:intron | 40.0% | |
!! | TCACTGGGATTTCAAGTTCT+TGG | + | chr4_3:46365860-46365879 | Msa0643440:intron | 40.0% |
CCCTCTCAACAAGTTAAACA+AGG | - | chr4_3:46365910-46365929 | None:intergenic | 40.0% | |
!!! | TTTGGGTTTTGACTTCCAAC+TGG | + | chr4_3:46365936-46365955 | Msa0643440:intron | 40.0% |
! | CTGTTGCATAACTTTGGTGT+AGG | + | chr4_3:46365993-46366012 | Msa0643440:intron | 40.0% |
CACACAATCAGAATCTAACC+AGG | - | chr4_3:46366057-46366076 | None:intergenic | 40.0% | |
ATTCTCTCAGACATTTCACC+GGG | + | chr4_3:46366317-46366336 | Msa0643440:intron | 40.0% | |
AATATGCTACCATGCGAGTT+AGG | + | chr4_3:46366449-46366468 | Msa0643440:intron | 40.0% | |
! | TCTCTTTTACCGCCAATATG+TGG | + | chr4_3:46366496-46366515 | Msa0643440:intron | 40.0% |
! | CTCTTTTACCGCCAATATGT+GGG | + | chr4_3:46366497-46366516 | Msa0643440:intron | 40.0% |
GGGTGGTAAACCAGAAATTT+GGG | - | chr4_3:46366545-46366564 | None:intergenic | 40.0% | |
TGGGTGGTAAACCAGAAATT+TGG | - | chr4_3:46366546-46366565 | None:intergenic | 40.0% | |
! | CAACAAAACCTTTTCTCGCT+GGG | - | chr4_3:46366565-46366584 | None:intergenic | 40.0% |
! | ACAACAAAACCTTTTCTCGC+TGG | - | chr4_3:46366566-46366585 | None:intergenic | 40.0% |
CCTGGTTAACAAATGTTCTC+TGG | - | chr4_3:46366704-46366723 | None:intergenic | 40.0% | |
! | CCAGAGAACATTTGTTAACC+AGG | + | chr4_3:46366701-46366720 | Msa0643440:CDS | 40.0% |
!! | GAGGGCATTGAAAAAGAAAC+AGG | - | chr4_3:46366756-46366775 | None:intergenic | 40.0% |
!! | TGCCCTCTTTGTTTCCTTTT+TGG | + | chr4_3:46366769-46366788 | Msa0643440:intron | 40.0% |
GTTTAGACTTTGTTCGTGGT+TGG | + | chr4_3:46366820-46366839 | Msa0643440:intron | 40.0% | |
!! | GATGTATATGGTTGGCTTTG+TGG | + | chr4_3:46367083-46367102 | Msa0643440:intron | 40.0% |
!! | TATATGGTTGGCTTTGTGGT+TGG | + | chr4_3:46367087-46367106 | Msa0643440:intron | 40.0% |
!! | ATATGGTTGGCTTTGTGGTT+GGG | + | chr4_3:46367088-46367107 | Msa0643440:intron | 40.0% |
GTGAAGTGATAAAAAGGGAG+TGG | + | chr4_3:46367131-46367150 | Msa0643440:intron | 40.0% | |
!! | TGAGCACCTTTTAGAAGAGT+TGG | + | chr4_3:46367548-46367567 | Msa0643440:intron | 40.0% |
!! | CACCTTTTAGAAGAGTTGGT+TGG | + | chr4_3:46367552-46367571 | Msa0643440:intron | 40.0% |
!! | TCACTCGAGGCATCTTTTTA+AGG | - | chr4_3:46367696-46367715 | None:intergenic | 40.0% |
TGGATAGTGTTGCATTACCA+AGG | + | chr4_3:46367733-46367752 | Msa0643440:intron | 40.0% | |
GAATAACGATTGCATGCTTG+AGG | + | chr4_3:46367858-46367877 | Msa0643440:intron | 40.0% | |
ATAACGATTGCATGCTTGAG+GGG | + | chr4_3:46367860-46367879 | Msa0643440:intron | 40.0% | |
AAGAAAGCTACGGTTCCTAA+TGG | + | chr4_3:46368190-46368209 | Msa0643440:CDS | 40.0% | |
ATGGATCAGGTCAATAAAGC+TGG | + | chr4_3:46368209-46368228 | Msa0643440:CDS | 40.0% | |
TGGATCAGGTCAATAAAGCT+GGG | + | chr4_3:46368210-46368229 | Msa0643440:CDS | 40.0% | |
GCAATCAGATACATACTTGG+AGG | + | chr4_3:46368256-46368275 | Msa0643440:CDS | 40.0% | |
! | CAGTTCTCTCTCTTCTGAAA+CGG | - | chr4_3:46368896-46368915 | None:intergenic | 40.0% |
!!! | GACGCCATTTTTGTTTGAAC+AGG | + | chr4_3:46368951-46368970 | Msa0643440:CDS | 40.0% |
TTGTTTGAACAGGTTCCTTG+AGG | + | chr4_3:46368961-46368980 | Msa0643440:intron | 40.0% | |
!! | TGGTTAGATTTTGATGGTCC+AGG | - | chr4_3:46369105-46369124 | None:intergenic | 40.0% |
CCTTTCAAACCTGAGAACTT+TGG | - | chr4_3:46369166-46369185 | None:intergenic | 40.0% | |
CCAAAGTTCTCAGGTTTGAA+AGG | + | chr4_3:46369163-46369182 | Msa0643440:CDS | 40.0% | |
! | GAAAAGCATATTGCCTCTTG+TGG | - | chr4_3:46369202-46369221 | None:intergenic | 40.0% |
! | TATGCTTTTCAATCAGGCAC+CGG | + | chr4_3:46369212-46369231 | Msa0643440:CDS | 40.0% |
!! | TCCATAATTTGCTCATCAGC+CGG | - | chr4_3:46369234-46369253 | None:intergenic | 40.0% |
GGATCCTATTTCAACTGAGA+TGG | + | chr4_3:46369251-46369270 | Msa0643440:CDS | 40.0% | |
! | AGCTAAGCATTTTTACCTCC+CGG | - | chr4_3:46369527-46369546 | None:intergenic | 40.0% |
AGTTAAGAAGTTGAAGTCCC+TGG | - | chr4_3:46369697-46369716 | None:intergenic | 40.0% | |
ATATGACTGCATGTCACCAT+TGG | + | chr4_3:46369917-46369936 | Msa0643440:intron | 40.0% | |
AACAGGAAGTTGAAAACCGT+AGG | + | chr4_3:46369950-46369969 | Msa0643440:intron | 40.0% | |
TCTGAATGCCTTCTTGTCTA+AGG | + | chr4_3:46370390-46370409 | Msa0643440:intron | 40.0% | |
ATGACAAGGATGAGAGCTAT+TGG | - | chr4_3:46370479-46370498 | None:intergenic | 40.0% | |
TTACCTAGGACAAGATGACA+AGG | - | chr4_3:46370493-46370512 | None:intergenic | 40.0% | |
! | TCCGATATTTGCAAAAGCAC+AGG | + | chr4_3:46370595-46370614 | Msa0643440:CDS | 40.0% |
TTGACAGCAATTCTCAAGTG+GGG | + | chr4_3:46370774-46370793 | Msa0643440:CDS | 40.0% | |
TAGCCCTATTAAACACCAGA+TGG | - | chr4_3:46371348-46371367 | None:intergenic | 40.0% | |
ATTTGCCAAGAGCAGAACAT+AGG | - | chr4_3:46371547-46371566 | None:intergenic | 40.0% | |
GACGCACCAAATATGTGAAA+AGG | - | chr4_3:46371712-46371731 | None:intergenic | 40.0% | |
TCATGCAGCTGTCTTCTATT+TGG | + | chr4_3:46371935-46371954 | Msa0643440:intron | 40.0% | |
AACACCCATAATTTAGGCGA+TGG | - | chr4_3:46372006-46372025 | None:intergenic | 40.0% | |
CACTCAACTCATAAGTCAGA+AGG | - | chr4_3:46372117-46372136 | None:intergenic | 40.0% | |
GTTGTTCTCCTCCTCTTATT+AGG | + | chr4_3:46372841-46372860 | Msa0643440:intron | 40.0% | |
GTATGTGCATCCCTAATAAG+AGG | - | chr4_3:46372855-46372874 | None:intergenic | 40.0% | |
ATTAGGGATGCACATACTAC+TGG | + | chr4_3:46372858-46372877 | Msa0643440:intron | 40.0% | |
TACAGAGAACCATACCCATT+TGG | + | chr4_3:46372891-46372910 | Msa0643440:CDS | 40.0% | |
! | GATGTCCATTCTATTTGGTG+TGG | + | chr4_3:46372977-46372996 | Msa0643440:CDS | 40.0% |
TGGTGTGGTACATATGAACT+TGG | + | chr4_3:46372992-46373011 | Msa0643440:CDS | 40.0% | |
GGTGTGGTACATATGAACTT+GGG | + | chr4_3:46372993-46373012 | Msa0643440:CDS | 40.0% | |
!! | CTTGCTCTTCATGTTGCTTT+AGG | + | chr4_3:46373134-46373153 | Msa0643440:intron | 40.0% |
CCACTTGACAACAATGAGAA+GGG | - | chr4_3:46373212-46373231 | None:intergenic | 40.0% | |
ACCACTTGACAACAATGAGA+AGG | - | chr4_3:46373213-46373232 | None:intergenic | 40.0% | |
ATTGTTGTCAAGTGGTGTAC+TGG | + | chr4_3:46373217-46373236 | Msa0643440:CDS | 40.0% | |
TTAAGCCCCTTTGACAATCT+TGG | + | chr4_3:46373280-46373299 | Msa0643440:CDS | 40.0% | |
TCTCACCAAGATTGTCAAAG+GGG | - | chr4_3:46373288-46373307 | None:intergenic | 40.0% | |
TTGGTGAGAATGAGTTGTTC+TGG | + | chr4_3:46373299-46373318 | Msa0643440:CDS | 40.0% | |
TGGTGAGAATGAGTTGTTCT+GGG | + | chr4_3:46373300-46373319 | Msa0643440:CDS | 40.0% | |
!!! | GCAGGTTTTGTTATTGCTTC+TGG | + | chr4_3:46373423-46373442 | Msa0643440:intron | 40.0% |
TGAAAACACAAGGGAGACAA+AGG | - | chr4_3:46373520-46373539 | None:intergenic | 40.0% | |
AGCAGAAACACAGTCGTAAA+GGG | - | chr4_3:46373640-46373659 | None:intergenic | 40.0% | |
AAGCAGAAACACAGTCGTAA+AGG | - | chr4_3:46373641-46373660 | None:intergenic | 40.0% | |
! | TACGACTGTGTTTCTGCTTA+TGG | + | chr4_3:46373642-46373661 | Msa0643440:intron | 40.0% |
! | GCAATGCCACAGATTTTATG+AGG | + | chr4_3:46373835-46373854 | Msa0643440:intron | 40.0% |
! | TGTGCTTAATACCTCTGAAG+CGG | + | chr4_3:46373913-46373932 | Msa0643440:CDS | 40.0% |
AAATTCCTCATGATGTTGCC+TGG | - | chr4_3:46373963-46373982 | None:intergenic | 40.0% | |
! | CACTCCATTGAGTTTGTTCT+TGG | + | chr4_3:46374016-46374035 | Msa0643440:CDS | 40.0% |
CAGCATCATATCTTCGACTT+TGG | + | chr4_3:46374053-46374072 | Msa0643440:CDS | 40.0% | |
ATCTTCGACTTTGGGCATTA+AGG | + | chr4_3:46374062-46374081 | Msa0643440:CDS | 40.0% | |
ATAGGAAACTGAGGCAAGTA+GGG | - | chr4_3:46374107-46374126 | None:intergenic | 40.0% | |
AATAGGAAACTGAGGCAAGT+AGG | - | chr4_3:46374108-46374127 | None:intergenic | 40.0% | |
GTGGCCTATAACCTTTGATA+TGG | + | chr4_3:46374233-46374252 | Msa0643440:intron | 40.0% | |
ACTATGGGATGCACATTGAA+GGG | - | chr4_3:46374314-46374333 | None:intergenic | 40.0% | |
TACTATGGGATGCACATTGA+AGG | - | chr4_3:46374315-46374334 | None:intergenic | 40.0% | |
! | GATGGCTTTTACACTGTGTT+TGG | + | chr4_3:46374396-46374415 | Msa0643440:intron | 40.0% |
! | ACCAAATGTATTCGGTGGAA+GGG | - | chr4_3:46375032-46375051 | None:intergenic | 40.0% |
! | GACCTTAAGAGGAAGTGTAA+TGG | + | chr4_3:46375087-46375106 | Msa0643440:intron | 40.0% |
TGCCATTACACTTCCTCTTA+AGG | - | chr4_3:46375092-46375111 | None:intergenic | 40.0% | |
!!! | ACTCTTGTGGTTGGTTTTGT+AGG | + | chr4_3:46375171-46375190 | Msa0643440:intron | 40.0% |
!!! | CTCTTGTGGTTGGTTTTGTA+GGG | + | chr4_3:46375172-46375191 | Msa0643440:intron | 40.0% |
GTTAAGGTGGCAAAGGAAAA+AGG | - | chr4_3:46375949-46375968 | None:intergenic | 40.0% | |
! | ATTTTCATCCTCGGTTAAGG+TGG | - | chr4_3:46375962-46375981 | None:intergenic | 40.0% |
ATTTGTGGGAACCAATTTGG+TGG | + | chr4_3:46376061-46376080 | Msa0643440:three_prime_UTR | 40.0% | |
ATATCAAGCTGCACAACATC+AGG | - | chr4_3:46376104-46376123 | None:intergenic | 40.0% | |
!!! | AATTCTGGCTCATTTTCCCA+TGG | + | chr4_3:46376139-46376158 | Msa0643440:three_prime_UTR | 40.0% |
!! | TGTAGCTTGGACTTTTGAGA+AGG | + | chr4_3:46376332-46376351 | Msa0643440:three_prime_UTR | 40.0% |
GCTTGTTCATTTCTCTCCTA+AGG | + | chr4_3:46376450-46376469 | Msa0643440:three_prime_UTR | 40.0% | |
TTGCGACGAAGAAAGTGAAG+CGG | + | chr4_3:46364620-46364639 | Msa0643440:five_prime_UTR | 45.0% | |
GAACGCATGAGATCCATTGA+AGG | - | chr4_3:46364770-46364789 | None:intergenic | 45.0% | |
!! | ATAGGTGATGATTCGGTGAG+CGG | - | chr4_3:46364834-46364853 | None:intergenic | 45.0% |
! | AAGACCGAGTTGGCCTAAAT+AGG | - | chr4_3:46364852-46364871 | None:intergenic | 45.0% |
CGCGAAAATCGATATGCGTA+AGG | - | chr4_3:46364897-46364916 | None:intergenic | 45.0% | |
TGTCTGACAATGACTCGTGT+TGG | + | chr4_3:46365207-46365226 | Msa0643440:intron | 45.0% | |
AGAGATGCTAAGTGCTTCAC+TGG | + | chr4_3:46365268-46365287 | Msa0643440:intron | 45.0% | |
TGTCAAACTCCAACACACGT+CGG | + | chr4_3:46365657-46365676 | Msa0643440:intron | 45.0% | |
ATAACTTAGTAGGGCCGGTT+TGG | - | chr4_3:46365821-46365840 | None:intergenic | 45.0% | |
TTGTTGAGAGGGCTTCAGTT+TGG | + | chr4_3:46365918-46365937 | Msa0643440:intron | 45.0% | |
TGTTGAGAGGGCTTCAGTTT+GGG | + | chr4_3:46365919-46365938 | Msa0643440:intron | 45.0% | |
TTTGAGCCTAGAGTCTTGGT+TGG | + | chr4_3:46366227-46366246 | Msa0643440:intron | 45.0% | |
!!! | TCTCTGGAAGGGGCTTTTTT+CGG | - | chr4_3:46366688-46366707 | None:intergenic | 45.0% |
!! | TATGGTTGGCTTTGTGGTTG+GGG | + | chr4_3:46367089-46367108 | Msa0643440:intron | 45.0% |
TGATTGTTCGCCTGAAGAGT+TGG | + | chr4_3:46367713-46367732 | Msa0643440:intron | 45.0% | |
GCAACACTATCCAACTCTTC+AGG | - | chr4_3:46367726-46367745 | None:intergenic | 45.0% | |
! | GGATGGGAAGGTTCAGTTTT+TGG | - | chr4_3:46367827-46367846 | None:intergenic | 45.0% |
CATGATGAACATGGATGGGA+AGG | - | chr4_3:46367839-46367858 | None:intergenic | 45.0% | |
CATATTGAACGAAAGGCCCT+AGG | - | chr4_3:46368342-46368361 | None:intergenic | 45.0% | |
ATGCTCAGCACAAATAGCCA+TGG | - | chr4_3:46368536-46368555 | None:intergenic | 45.0% | |
CGTTTCAGAAGAGAGAGAAC+TGG | + | chr4_3:46368894-46368913 | Msa0643440:CDS | 45.0% | |
TTCAGAAGAGAGAGAACTGG+AGG | + | chr4_3:46368897-46368916 | Msa0643440:CDS | 45.0% | |
TTTGTACAGGAAACGATGCC+TGG | + | chr4_3:46369084-46369103 | Msa0643440:intron | 45.0% | |
!! | ATGTTGTTTCGTGCCACAAG+AGG | + | chr4_3:46369186-46369205 | Msa0643440:CDS | 45.0% |
ACCGGCTGATGAGCAAATTA+TGG | + | chr4_3:46369230-46369249 | Msa0643440:CDS | 45.0% | |
! | GCTAAGCATTTTTACCTCCC+GGG | - | chr4_3:46369526-46369545 | None:intergenic | 45.0% |
!! | ATTGTTTTGTAACACGGGCC+AGG | + | chr4_3:46369576-46369595 | Msa0643440:intron | 45.0% |
!! | TTGTTTTGTAACACGGGCCA+GGG | + | chr4_3:46369577-46369596 | Msa0643440:intron | 45.0% |
AGTAGACTGAGTGGACCTTT+AGG | + | chr4_3:46369878-46369897 | Msa0643440:intron | 45.0% | |
AAGTTGCCTCTAAGTCAGCA+AGG | - | chr4_3:46370283-46370302 | None:intergenic | 45.0% | |
!! | TGCTGACTTAGAGGCAACTT+TGG | + | chr4_3:46370283-46370302 | Msa0643440:CDS | 45.0% |
TTAGAGGCAACTTTGGATGC+TGG | + | chr4_3:46370290-46370309 | Msa0643440:CDS | 45.0% | |
TAGAGGCAACTTTGGATGCT+GGG | + | chr4_3:46370291-46370310 | Msa0643440:CDS | 45.0% | |
CAACTTTGGATGCTGGGATT+AGG | + | chr4_3:46370297-46370316 | Msa0643440:CDS | 45.0% | |
!! | TGGGATTAGGCATCGGAATA+AGG | + | chr4_3:46370310-46370329 | Msa0643440:CDS | 45.0% |
AAGGCTCTATCTTCTGTAGG+AGG | + | chr4_3:46370329-46370348 | Msa0643440:CDS | 45.0% | |
CATCCTTGTCATCTTGTCCT+AGG | + | chr4_3:46370487-46370506 | Msa0643440:intron | 45.0% | |
GTCCTAGGTAAGAAGAGAGA+AGG | + | chr4_3:46370502-46370521 | Msa0643440:intron | 45.0% | |
AGCCTTCTCTCTTCTTACCT+AGG | - | chr4_3:46370507-46370526 | None:intergenic | 45.0% | |
TGACAGCAATTCTCAAGTGG+GGG | + | chr4_3:46370775-46370794 | Msa0643440:CDS | 45.0% | |
CCAGTGCATCCATTGAATGA+AGG | - | chr4_3:46370805-46370824 | None:intergenic | 45.0% | |
CCTTCATTCAATGGATGCAC+TGG | + | chr4_3:46370802-46370821 | Msa0643440:CDS | 45.0% | |
TGAAAGGAAGCTCAGCAATC+AGG | + | chr4_3:46371170-46371189 | Msa0643440:CDS | 45.0% | |
TATGATTTCTGCCAGCGACT+AGG | + | chr4_3:46371586-46371605 | Msa0643440:intron | 45.0% | |
AATGCCGAGATAGTTCATGC+AGG | + | chr4_3:46371740-46371759 | Msa0643440:CDS | 45.0% | |
GACACCTGCATGAACTATCT+CGG | - | chr4_3:46371747-46371766 | None:intergenic | 45.0% | |
GACAGCTGCATGAACTATCT+CGG | - | chr4_3:46371928-46371947 | None:intergenic | 45.0% | |
ACCTGAGTTAACTACCCGTA+TGG | - | chr4_3:46372200-46372219 | None:intergenic | 45.0% | |
ATACGGGTAGTTAACTCAGG+TGG | + | chr4_3:46372199-46372218 | Msa0643440:intron | 45.0% | |
GGTAGTTAACTCAGGTGGTT+GGG | + | chr4_3:46372204-46372223 | Msa0643440:intron | 45.0% | |
TTAACTCAGGTGGTTGGGAT+GGG | + | chr4_3:46372209-46372228 | Msa0643440:intron | 45.0% | |
! | TCAACCATTTTGTCCCACGT+AGG | + | chr4_3:46372257-46372276 | Msa0643440:intron | 45.0% |
CGACAAGTTAAGAGTGGAAC+TGG | - | chr4_3:46372484-46372503 | None:intergenic | 45.0% | |
TACGGTCGACAAGTTAAGAG+TGG | - | chr4_3:46372490-46372509 | None:intergenic | 45.0% | |
ACTCGTTTGAATGGCTTCTC+TGG | + | chr4_3:46372673-46372692 | Msa0643440:intron | 45.0% | |
AAACAGCGCAAGTTAAAGCC+TGG | - | chr4_3:46372813-46372832 | None:intergenic | 45.0% | |
TGTGCATCCCTAATAAGAGG+AGG | - | chr4_3:46372852-46372871 | None:intergenic | 45.0% | |
! | AGAACCATACCCATTTGGTG+TGG | + | chr4_3:46372896-46372915 | Msa0643440:CDS | 45.0% |
TTGGCAGCTCACTGGATATA+AGG | + | chr4_3:46373048-46373067 | Msa0643440:CDS | 45.0% | |
CCCTTCTCATTGTTGTCAAG+TGG | + | chr4_3:46373209-46373228 | Msa0643440:CDS | 45.0% | |
GGTGAGAATGAGTTGTTCTG+GGG | + | chr4_3:46373301-46373320 | Msa0643440:CDS | 45.0% | |
!! | TGGCTCTAATTGCAGTTCCA+TGG | + | chr4_3:46373443-46373462 | Msa0643440:CDS | 45.0% |
AAACACAAGGGAGACAAAGG+AGG | - | chr4_3:46373517-46373536 | None:intergenic | 45.0% | |
GCAGAAACACAGTCGTAAAG+GGG | - | chr4_3:46373639-46373658 | None:intergenic | 45.0% | |
GAGGCAAGTAGGGAAAATCA+CGG | - | chr4_3:46374097-46374116 | None:intergenic | 45.0% | |
AGAAAGTCCTGCTACTAGCT+TGG | + | chr4_3:46374204-46374223 | Msa0643440:CDS | 45.0% | |
! | GAAAGTCCTGCTACTAGCTT+GGG | + | chr4_3:46374205-46374224 | Msa0643440:CDS | 45.0% |
! | AAAGTCCTGCTACTAGCTTG+GGG | + | chr4_3:46374206-46374225 | Msa0643440:CDS | 45.0% |
TATGGGATGCACATTGAAGG+GGG | - | chr4_3:46374312-46374331 | None:intergenic | 45.0% | |
CTATGGGATGCACATTGAAG+GGG | - | chr4_3:46374313-46374332 | None:intergenic | 45.0% | |
ACCCTTCCACCGAATACATT+TGG | + | chr4_3:46375028-46375047 | Msa0643440:intron | 45.0% | |
! | GACCAAATGTATTCGGTGGA+AGG | - | chr4_3:46375033-46375052 | None:intergenic | 45.0% |
!! | CATTTGGTCTTTTCGCAGAG+AGG | + | chr4_3:46375044-46375063 | Msa0643440:intron | 45.0% |
TGAACTTGTATCCATCACCG+TGG | - | chr4_3:46375924-46375943 | None:intergenic | 45.0% | |
! | TCATTTTCCCATGGCTATGC+TGG | + | chr4_3:46376148-46376167 | Msa0643440:three_prime_UTR | 45.0% |
TGTTTCACCAGCATAGCCAT+GGG | - | chr4_3:46376158-46376177 | None:intergenic | 45.0% | |
ATGTTTCACCAGCATAGCCA+TGG | - | chr4_3:46376159-46376178 | None:intergenic | 45.0% | |
AACATTTCGACCAACTGTCG+TGG | + | chr4_3:46376174-46376193 | Msa0643440:three_prime_UTR | 45.0% | |
!! | GCTTGGACTTTTGAGAAGGT+AGG | + | chr4_3:46376336-46376355 | Msa0643440:three_prime_UTR | 45.0% |
!! | ATAAATATTAGTATAAATAA+AGG | - | chr4_3:46367306-46367325 | None:intergenic | 5.0% |
! | TGAAGGGTGGTTAGTTACGG+AGG | - | chr4_3:46364663-46364682 | None:intergenic | 50.0% |
! | CCTCTAATCAAAGGTGTGGC+TGG | - | chr4_3:46365236-46365255 | None:intergenic | 50.0% |
CCAGCCACACCTTTGATTAG+AGG | + | chr4_3:46365233-46365252 | Msa0643440:intron | 50.0% | |
CAGAGAGGTTCAATGCCAGT+TGG | - | chr4_3:46365954-46365973 | None:intergenic | 50.0% | |
AAGTTATGCAACAGCGCCGT+GGG | - | chr4_3:46365987-46366006 | None:intergenic | 50.0% | |
AAAGTTATGCAACAGCGCCG+TGG | - | chr4_3:46365988-46366007 | None:intergenic | 50.0% | |
ACGGCGCTGTTGCATAACTT+TGG | + | chr4_3:46365987-46366006 | Msa0643440:intron | 50.0% | |
CTCGTTTGAGCCTAGAGTCT+TGG | + | chr4_3:46366223-46366242 | Msa0643440:intron | 50.0% | |
CCAGATCCAACCAAGACTCT+AGG | - | chr4_3:46366236-46366255 | None:intergenic | 50.0% | |
CCTAGAGTCTTGGTTGGATC+TGG | + | chr4_3:46366233-46366252 | Msa0643440:intron | 50.0% | |
GTTTACCACCCAGCGAGAAA+AGG | + | chr4_3:46366554-46366573 | Msa0643440:intron | 50.0% | |
! | CAAAACCTTTTCTCGCTGGG+TGG | - | chr4_3:46366562-46366581 | None:intergenic | 50.0% |
TTCAGGCGAACAATCACTCG+AGG | - | chr4_3:46367709-46367728 | None:intergenic | 50.0% | |
! | GCTACGGTTCCTAATGGATC+AGG | + | chr4_3:46368196-46368215 | Msa0643440:CDS | 50.0% |
TGAACGAAAGGCCCTAGGAT+AGG | - | chr4_3:46368337-46368356 | None:intergenic | 50.0% | |
CATGCTCAGCAAGTTGTGTC+TGG | - | chr4_3:46368417-46368436 | None:intergenic | 50.0% | |
ACAAAGGCAAATAACCCGGG+AGG | + | chr4_3:46369509-46369528 | Msa0643440:CDS | 50.0% | |
TGGATGCTGGGATTAGGCAT+CGG | + | chr4_3:46370303-46370322 | Msa0643440:CDS | 50.0% | |
! | AATGTCTTGTTGGAGAGGGC+TGG | + | chr4_3:46370570-46370589 | Msa0643440:CDS | 50.0% |
GTTGCAGTGCATCCTGAATC+TGG | - | chr4_3:46370745-46370764 | None:intergenic | 50.0% | |
GGGGGCAATCCTTCATTCAA+TGG | + | chr4_3:46370793-46370812 | Msa0643440:CDS | 50.0% | |
CATGGAATTTGCCTGCTGCT+TGG | + | chr4_3:46371126-46371145 | Msa0643440:CDS | 50.0% | |
CCATAAAGCTTCCTAGTCGC+TGG | - | chr4_3:46371600-46371619 | None:intergenic | 50.0% | |
CCAGCGACTAGGAAGCTTTA+TGG | + | chr4_3:46371597-46371616 | Msa0643440:intron | 50.0% | |
GCCATACGGGTAGTTAACTC+AGG | + | chr4_3:46372196-46372215 | Msa0643440:intron | 50.0% | |
GGGTAGTTAACTCAGGTGGT+TGG | + | chr4_3:46372203-46372222 | Msa0643440:intron | 50.0% | |
GTTAACTCAGGTGGTTGGGA+TGG | + | chr4_3:46372208-46372227 | Msa0643440:intron | 50.0% | |
! | TGGTTGGGATGGGTAGGTTT+TGG | + | chr4_3:46372219-46372238 | Msa0643440:intron | 50.0% |
! | GGTTGGGATGGGTAGGTTTT+GGG | + | chr4_3:46372220-46372239 | Msa0643440:intron | 50.0% |
! | ACCATTTTGTCCCACGTAGG+TGG | + | chr4_3:46372260-46372279 | Msa0643440:intron | 50.0% |
GAGGTTCAGGGTTCAAACCT+TGG | + | chr4_3:46372325-46372344 | Msa0643440:intron | 50.0% | |
CTGGCATAGTTGCACTCTTC+TGG | + | chr4_3:46372692-46372711 | Msa0643440:intron | 50.0% | |
GGATCCACACCAAATGGGTA+TGG | - | chr4_3:46372903-46372922 | None:intergenic | 50.0% | |
AGCTGGGATCCACACCAAAT+GGG | - | chr4_3:46372908-46372927 | None:intergenic | 50.0% | |
TCGTTTCTTTGGCAGCTCAC+TGG | + | chr4_3:46373040-46373059 | Msa0643440:CDS | 50.0% | |
!! | ATGAGTTGTTCTGGGGCCAA+AGG | + | chr4_3:46373308-46373327 | Msa0643440:CDS | 50.0% |
ACCATACTTGGAGTGGCCTT+TGG | - | chr4_3:46373327-46373346 | None:intergenic | 50.0% | |
!! | GGCTTTGGAAAGAGCATCCA+TGG | - | chr4_3:46373463-46373482 | None:intergenic | 50.0% |
!! | TACCTCTGAAGCGGATCTTG+AGG | + | chr4_3:46373922-46373941 | Msa0643440:CDS | 50.0% |
AACCTCAAGATCCGCTTCAG+AGG | - | chr4_3:46373927-46373946 | None:intergenic | 50.0% | |
AGCGGATCTTGAGGTTGAAC+CGG | + | chr4_3:46373931-46373950 | Msa0643440:CDS | 50.0% | |
TGATGTTGCCTGGCAGAATC+CGG | - | chr4_3:46373953-46373972 | None:intergenic | 50.0% | |
TTCTGCCAGGCAACATCATG+AGG | + | chr4_3:46373955-46373974 | Msa0643440:CDS | 50.0% | |
CAAGTAGGGAAAATCACGGC+TGG | - | chr4_3:46374093-46374112 | None:intergenic | 50.0% | |
TCTGTGACCACTTTGCAGCT+TGG | + | chr4_3:46374151-46374170 | Msa0643440:intron | 50.0% | |
GAATGAGCCAAGCTGCAAAG+TGG | - | chr4_3:46374161-46374180 | None:intergenic | 50.0% | |
! | AAGTCCTGCTACTAGCTTGG+GGG | + | chr4_3:46374207-46374226 | Msa0643440:CDS | 50.0% |
! | ATTCGGTGGAAGGGTGTGTT+TGG | - | chr4_3:46375023-46375042 | None:intergenic | 50.0% |
TTCAACCCAGTGAAGACGCA+GGG | - | chr4_3:46375884-46375903 | None:intergenic | 50.0% | |
ATTCAACCCAGTGAAGACGC+AGG | - | chr4_3:46375885-46375904 | None:intergenic | 50.0% | |
TTCCTTTGCCACCTTAACCG+AGG | + | chr4_3:46375951-46375970 | Msa0643440:CDS | 50.0% | |
ATCCTCGGTTAAGGTGGCAA+AGG | - | chr4_3:46375956-46375975 | None:intergenic | 50.0% | |
! | GGGAACCAATTTGGTGGCTA+TGG | + | chr4_3:46376067-46376086 | Msa0643440:three_prime_UTR | 50.0% |
GACGTCCATAGCCACCAAAT+TGG | - | chr4_3:46376075-46376094 | None:intergenic | 50.0% | |
CAGATGACATCCACGACAGT+TGG | - | chr4_3:46376187-46376206 | None:intergenic | 50.0% | |
CTCCAACACACGTCGGAAGT+TGG | + | chr4_3:46365664-46365683 | Msa0643440:intron | 55.0% | |
GTCCAACTTCCGACGTGTGT+TGG | - | chr4_3:46365669-46365688 | None:intergenic | 55.0% | |
TCTCTGTTCACTGCCTCCCA+CGG | + | chr4_3:46365968-46365987 | Msa0643440:intron | 55.0% | |
CAGACATTTCACCGGGAGAG+AGG | + | chr4_3:46366324-46366343 | Msa0643440:intron | 55.0% | |
ACCGGGAGAGAGGCTAAAAG+TGG | + | chr4_3:46366334-46366353 | Msa0643440:intron | 55.0% | |
!! | CCCACTTTTAGCCTCTCTCC+CGG | - | chr4_3:46366338-46366357 | None:intergenic | 55.0% |
CCGGGAGAGAGGCTAAAAGT+GGG | + | chr4_3:46366335-46366354 | Msa0643440:intron | 55.0% | |
CGGGAGAGAGGCTAAAAGTG+GGG | + | chr4_3:46366336-46366355 | Msa0643440:intron | 55.0% | |
!! | GTTGGCTTTGTGGTTGGGGT+GGG | + | chr4_3:46367093-46367112 | Msa0643440:intron | 55.0% |
GGGGAAAAAGGGATGCCTCA+AGG | - | chr4_3:46368979-46368998 | None:intergenic | 55.0% | |
!! | ATCGCGCCTTGCTGACTTAG+AGG | + | chr4_3:46370274-46370293 | Msa0643440:CDS | 55.0% |
TTGCGGTGATGTTTGGCGAC+TGG | + | chr4_3:46371100-46371119 | Msa0643440:CDS | 55.0% | |
TGCGGTGATGTTTGGCGACT+GGG | + | chr4_3:46371101-46371120 | Msa0643440:CDS | 55.0% | |
ATGTTTGGCGACTGGGGTCA+TGG | + | chr4_3:46371108-46371127 | Msa0643440:CDS | 55.0% | |
! | TTGCCTGCTGCTTGGAGCAT+TGG | + | chr4_3:46371134-46371153 | Msa0643440:CDS | 55.0% |
GAACCAATGCTCCAAGCAGC+AGG | - | chr4_3:46371140-46371159 | None:intergenic | 55.0% | |
!!! | GATGGGTAGGTTTTGGGCAG+AGG | + | chr4_3:46372226-46372245 | Msa0643440:intron | 55.0% |
GCCACCTACGTGGGACAAAA+TGG | - | chr4_3:46372264-46372283 | None:intergenic | 55.0% | |
TTTGTCCCACGTAGGTGGCT+CGG | + | chr4_3:46372265-46372284 | Msa0643440:intron | 55.0% | |
!! | TGGCTCGGTTGGTGAGCTAA+GGG | + | chr4_3:46372280-46372299 | Msa0643440:intron | 55.0% |
CAGCTGGGATCCACACCAAA+TGG | - | chr4_3:46372909-46372928 | None:intergenic | 55.0% | |
!! | CATTTGGTGTGGATCCCAGC+TGG | + | chr4_3:46372907-46372926 | Msa0643440:CDS | 55.0% |
!! | CAAGTGGTGTACTGGCTCTC+AGG | + | chr4_3:46373225-46373244 | Msa0643440:CDS | 55.0% |
GCCAAAGGCCACTCCAAGTA+TGG | + | chr4_3:46373323-46373342 | Msa0643440:intron | 55.0% | |
AGGTTGAACCGGATTCTGCC+AGG | + | chr4_3:46373942-46373961 | Msa0643440:CDS | 55.0% | |
CTTACCCCCAAGCTAGTAGC+AGG | - | chr4_3:46374214-46374233 | None:intergenic | 55.0% | |
! | GCTACTAGCTTGGGGGTAAG+TGG | + | chr4_3:46374214-46374233 | Msa0643440:intron | 55.0% |
! | TGTAGCTTCTGATGGGTCCC+AGG | + | chr4_3:46375472-46375491 | Msa0643440:intron | 55.0% |
TTCATGCCCTGCGTCTTCAC+TGG | + | chr4_3:46375875-46375894 | Msa0643440:CDS | 55.0% | |
TCATGCCCTGCGTCTTCACT+GGG | + | chr4_3:46375876-46375895 | Msa0643440:CDS | 55.0% | |
! | ATTCGGTGAGCGGACTCAGC+GGG | - | chr4_3:46364824-46364843 | None:intergenic | 60.0% |
!! | GATTCGGTGAGCGGACTCAG+CGG | - | chr4_3:46364825-46364844 | None:intergenic | 60.0% |
GTGGGAGGCAGTGAACAGAG+AGG | - | chr4_3:46365969-46365988 | None:intergenic | 60.0% | |
TTATGCAACAGCGCCGTGGG+AGG | - | chr4_3:46365984-46366003 | None:intergenic | 60.0% | |
!! | GGTTGGCTTTGTGGTTGGGG+TGG | + | chr4_3:46367092-46367111 | Msa0643440:intron | 60.0% |
GCTTTGTGGTTGGGGTGGGT+TGG | + | chr4_3:46367097-46367116 | Msa0643440:intron | 60.0% | |
!! | TGGGGTGGGTTGGAGAGCTA+AGG | + | chr4_3:46367107-46367126 | Msa0643440:intron | 60.0% |
CGATTGCATGCTTGAGGGGC+AGG | + | chr4_3:46367864-46367883 | Msa0643440:intron | 60.0% | |
GCGGTGATGTTTGGCGACTG+GGG | + | chr4_3:46371102-46371121 | Msa0643440:CDS | 60.0% | |
CTCAGGTGGTTGGGATGGGT+AGG | + | chr4_3:46372213-46372232 | Msa0643440:intron | 60.0% | |
ACCAACCGAGCCACCTACGT+GGG | - | chr4_3:46372273-46372292 | None:intergenic | 60.0% | |
!! | GTGGCTCGGTTGGTGAGCTA+AGG | + | chr4_3:46372279-46372298 | Msa0643440:intron | 60.0% |
GAACGACTTCCACGCCAGCT+GGG | - | chr4_3:46372924-46372943 | None:intergenic | 60.0% | |
TGAACGACTTCCACGCCAGC+TGG | - | chr4_3:46372925-46372944 | None:intergenic | 60.0% | |
!! | TCCCACGTAGGTGGCTCGGT+TGG | + | chr4_3:46372269-46372288 | Msa0643440:intron | 65.0% |
CACCAACCGAGCCACCTACG+TGG | - | chr4_3:46372274-46372293 | None:intergenic | 65.0% | |
GGTGTGGATCCCAGCTGGCG+TGG | + | chr4_3:46372912-46372931 | Msa0643440:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 46364610 | 46376486 | 46364610 | ID=Msa0643440;Name=Msa0643440 |
chr4_3 | mRNA | 46364610 | 46376486 | 46364610 | ID=Msa0643440-mRNA-1;Parent=Msa0643440;Name=Msa0643440-mRNA-1;_AED=0.13;_eAED=0.13;_QI=133|1|1|1|1|1|18|502|820 |
chr4_3 | exon | 46364610 | 46364886 | 46364610 | ID=Msa0643440-mRNA-1:exon:10747;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46366678 | 46366722 | 46366678 | ID=Msa0643440-mRNA-1:exon:10748;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46368167 | 46368286 | 46368167 | ID=Msa0643440-mRNA-1:exon:10749;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46368418 | 46368525 | 46368418 | ID=Msa0643440-mRNA-1:exon:10750;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46368859 | 46368972 | 46368859 | ID=Msa0643440-mRNA-1:exon:10751;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46369093 | 46369272 | 46369093 | ID=Msa0643440-mRNA-1:exon:10752;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46369393 | 46369530 | 46369393 | ID=Msa0643440-mRNA-1:exon:10753;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46370269 | 46370376 | 46370269 | ID=Msa0643440-mRNA-1:exon:10754;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46370509 | 46370616 | 46370509 | ID=Msa0643440-mRNA-1:exon:10755;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46370746 | 46370894 | 46370746 | ID=Msa0643440-mRNA-1:exon:10756;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46371038 | 46371191 | 46371038 | ID=Msa0643440-mRNA-1:exon:10757;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46371601 | 46371761 | 46371601 | ID=Msa0643440-mRNA-1:exon:10758;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46372863 | 46373069 | 46372863 | ID=Msa0643440-mRNA-1:exon:10759;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46373156 | 46373339 | 46373156 | ID=Msa0643440-mRNA-1:exon:10760;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46373427 | 46373510 | 46373427 | ID=Msa0643440-mRNA-1:exon:10761;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46373890 | 46374083 | 46373890 | ID=Msa0643440-mRNA-1:exon:10762;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46374169 | 46374228 | 46374169 | ID=Msa0643440-mRNA-1:exon:10763;Parent=Msa0643440-mRNA-1 |
chr4_3 | exon | 46375780 | 46376486 | 46375780 | ID=Msa0643440-mRNA-1:exon:10764;Parent=Msa0643440-mRNA-1 |
chr4_3 | five_prime_UTR | 46364610 | 46364742 | 46364610 | ID=Msa0643440-mRNA-1:five_prime_utr;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46364743 | 46364886 | 46364743 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46366678 | 46366722 | 46366678 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46368167 | 46368286 | 46368167 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46368418 | 46368525 | 46368418 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46368859 | 46368972 | 46368859 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46369093 | 46369272 | 46369093 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46369393 | 46369530 | 46369393 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46370269 | 46370376 | 46370269 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46370509 | 46370616 | 46370509 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46370746 | 46370894 | 46370746 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46371038 | 46371191 | 46371038 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46371601 | 46371761 | 46371601 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46372863 | 46373069 | 46372863 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46373156 | 46373339 | 46373156 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46373427 | 46373510 | 46373427 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46373890 | 46374083 | 46373890 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46374169 | 46374228 | 46374169 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | CDS | 46375780 | 46375984 | 46375780 | ID=Msa0643440-mRNA-1:cds;Parent=Msa0643440-mRNA-1 |
chr4_3 | three_prime_UTR | 46375985 | 46376486 | 46375985 | ID=Msa0643440-mRNA-1:three_prime_utr;Parent=Msa0643440-mRNA-1 |
Gene Sequence |
Protein sequence |