Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603440 | RYR70225.1 | 47.596 | 624 | 252 | 16 | 18 | 591 | 790 | 1388 | 1.28e-163 | 536 |
Msa0603440 | RYR70225.1 | 48.387 | 713 | 290 | 18 | 611 | 1259 | 64 | 762 | 0.0 | 585 |
Msa0603440 | RYR70225.1 | 63.484 | 1257 | 321 | 18 | 77 | 1273 | 210 | 1388 | 0.0 | 1530 |
Msa0603440 | RYR70225.1 | 64.286 | 84 | 18 | 1 | 1 | 72 | 47 | 130 | 1.62e-19 | 108 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603440 | sp|Q9XE58|SCL14_ARATH | 49.780 | 681 | 222 | 12 | 30 | 591 | 86 | 765 | 0.0 | 607 |
Msa0603440 | sp|Q9XE58|SCL14_ARATH | 47.151 | 702 | 287 | 17 | 636 | 1275 | 88 | 767 | 0.0 | 575 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0603440 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0603440 | Msa0684300 | 0.871305 | 7.562784e-67 | -8.615850e-47 |
Msa0223140 | Msa0603440 | 0.801841 | 7.444050e-49 | -8.615850e-47 |
Msa0302510 | Msa0603440 | 0.815633 | 8.364608e-52 | -8.615850e-47 |
Msa0339720 | Msa0603440 | 0.803740 | 3.017635e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603440 | MtrunA17_Chr4g0031711 | 94.645 | 691 | 37 | 0 | 585 | 1275 | 45 | 735 | 0.0 | 1321 |
Msa0603440 | MtrunA17_Chr4g0031711 | 44.925 | 670 | 254 | 16 | 18 | 591 | 83 | 733 | 2.67e-169 | 521 |
Msa0603440 | MtrunA17_Chr4g0031721 | 81.832 | 677 | 37 | 7 | 1 | 591 | 8 | 684 | 0.0 | 1079 |
Msa0603440 | MtrunA17_Chr4g0031721 | 49.135 | 694 | 279 | 14 | 623 | 1275 | 26 | 686 | 0.0 | 609 |
Msa0603440 | MtrunA17_Chr4g0031701 | 71.837 | 664 | 137 | 7 | 613 | 1275 | 14 | 628 | 0.0 | 931 |
Msa0603440 | MtrunA17_Chr4g0031701 | 46.190 | 630 | 252 | 12 | 18 | 589 | 24 | 624 | 4.80e-174 | 529 |
Msa0603440 | MtrunA17_Chr4g0031731 | 71.536 | 664 | 139 | 8 | 613 | 1275 | 14 | 628 | 0.0 | 918 |
Msa0603440 | MtrunA17_Chr4g0031731 | 45.714 | 630 | 255 | 11 | 18 | 589 | 24 | 624 | 1.56e-172 | 525 |
Msa0603440 | MtrunA17_Chr2g0328391 | 61.636 | 550 | 165 | 6 | 762 | 1275 | 132 | 671 | 0.0 | 689 |
Msa0603440 | MtrunA17_Chr2g0328391 | 47.147 | 666 | 246 | 17 | 1 | 591 | 35 | 669 | 0.0 | 548 |
Msa0603440 | MtrunA17_Chr2g0328391 | 46.429 | 112 | 53 | 4 | 591 | 696 | 24 | 134 | 5.75e-17 | 86.7 |
Msa0603440 | MtrunA17_Chr7g0238891 | 45.294 | 680 | 264 | 11 | 16 | 590 | 63 | 739 | 0.0 | 560 |
Msa0603440 | MtrunA17_Chr7g0238891 | 45.297 | 691 | 328 | 18 | 623 | 1275 | 64 | 742 | 6.27e-179 | 546 |
Msa0603440 | MtrunA17_Chr4g0031741 | 52.446 | 511 | 219 | 9 | 779 | 1275 | 152 | 652 | 1.24e-167 | 513 |
Msa0603440 | MtrunA17_Chr2g0328431 | 44.745 | 666 | 298 | 17 | 626 | 1275 | 45 | 656 | 1.73e-167 | 513 |
Msa0603440 | MtrunA17_Chr2g0328431 | 43.820 | 623 | 285 | 13 | 21 | 591 | 45 | 654 | 6.13e-154 | 478 |
Msa0603440 | MtrunA17_Chr2g0328411 | 44.578 | 664 | 298 | 18 | 626 | 1273 | 45 | 654 | 2.64e-167 | 514 |
Msa0603440 | MtrunA17_Chr2g0328411 | 42.945 | 652 | 289 | 16 | 21 | 612 | 45 | 673 | 5.14e-154 | 479 |
Msa0603440 | MtrunA17_Chr2g0328341 | 48.355 | 608 | 249 | 10 | 27 | 591 | 53 | 638 | 3.86e-166 | 509 |
Msa0603440 | MtrunA17_Chr2g0328341 | 48.326 | 478 | 230 | 7 | 800 | 1275 | 178 | 640 | 1.59e-151 | 471 |
Msa0603440 | MtrunA17_Chr2g0328381 | 48.344 | 604 | 259 | 12 | 27 | 590 | 50 | 640 | 1.23e-165 | 508 |
Msa0603440 | MtrunA17_Chr2g0328381 | 47.817 | 458 | 220 | 8 | 823 | 1275 | 200 | 643 | 1.00e-142 | 447 |
Msa0603440 | MtrunA17_Chr2g0328361 | 56.782 | 435 | 174 | 6 | 158 | 590 | 192 | 614 | 7.40e-159 | 489 |
Msa0603440 | MtrunA17_Chr2g0328361 | 38.931 | 655 | 301 | 17 | 632 | 1275 | 51 | 617 | 1.66e-132 | 419 |
Msa0603440 | MtrunA17_Chr2g0328401 | 42.743 | 627 | 303 | 14 | 636 | 1253 | 56 | 635 | 9.58e-148 | 461 |
Msa0603440 | MtrunA17_Chr2g0328401 | 41.051 | 609 | 275 | 14 | 26 | 572 | 50 | 636 | 3.38e-138 | 436 |
Msa0603440 | MtrunA17_Chr2g0328371 | 55.469 | 256 | 84 | 3 | 318 | 547 | 1 | 252 | 1.39e-90 | 293 |
Msa0603440 | MtrunA17_Chr2g0328371 | 52.157 | 255 | 116 | 3 | 975 | 1228 | 2 | 251 | 1.04e-88 | 287 |
Msa0603440 | MtrunA17_Chr2g0319091 | 32.979 | 376 | 247 | 4 | 897 | 1272 | 208 | 578 | 2.43e-65 | 233 |
Msa0603440 | MtrunA17_Chr2g0319091 | 30.000 | 380 | 238 | 3 | 236 | 590 | 202 | 578 | 1.02e-53 | 198 |
Msa0603440 | MtrunA17_Chr5g0447691 | 32.181 | 376 | 250 | 3 | 897 | 1272 | 173 | 543 | 3.77e-61 | 219 |
Msa0603440 | MtrunA17_Chr5g0447691 | 29.839 | 372 | 235 | 2 | 244 | 590 | 173 | 543 | 4.36e-51 | 190 |
Msa0603440 | MtrunA17_Chr3g0101141 | 32.804 | 378 | 245 | 6 | 897 | 1272 | 171 | 541 | 7.63e-59 | 213 |
Msa0603440 | MtrunA17_Chr3g0101141 | 28.889 | 405 | 254 | 6 | 214 | 590 | 143 | 541 | 7.14e-48 | 180 |
Msa0603440 | MtrunA17_Chr2g0290241 | 29.894 | 378 | 259 | 4 | 896 | 1272 | 52 | 424 | 1.60e-58 | 208 |
Msa0603440 | MtrunA17_Chr2g0290241 | 28.610 | 374 | 240 | 3 | 243 | 590 | 52 | 424 | 2.45e-48 | 178 |
Msa0603440 | MtrunA17_Chr4g0076091 | 30.829 | 386 | 247 | 8 | 896 | 1273 | 170 | 543 | 1.16e-55 | 203 |
Msa0603440 | MtrunA17_Chr4g0076091 | 29.679 | 374 | 236 | 4 | 243 | 590 | 170 | 542 | 6.49e-48 | 180 |
Msa0603440 | MtrunA17_Chr5g0445331 | 31.865 | 386 | 242 | 9 | 897 | 1272 | 157 | 531 | 3.20e-55 | 201 |
Msa0603440 | MtrunA17_Chr5g0445331 | 29.443 | 377 | 234 | 6 | 244 | 590 | 157 | 531 | 5.44e-46 | 174 |
Msa0603440 | MtrunA17_Chr8g0357601 | 30.479 | 397 | 246 | 7 | 893 | 1275 | 174 | 554 | 5.33e-52 | 193 |
Msa0603440 | MtrunA17_Chr8g0357601 | 27.857 | 420 | 250 | 10 | 211 | 590 | 145 | 551 | 1.24e-41 | 162 |
Msa0603440 | MtrunA17_Chr1g0159461 | 28.877 | 374 | 261 | 3 | 899 | 1272 | 223 | 591 | 6.79e-52 | 193 |
Msa0603440 | MtrunA17_Chr1g0159461 | 30.541 | 370 | 231 | 3 | 246 | 590 | 223 | 591 | 1.23e-48 | 183 |
Msa0603440 | MtrunA17_Chr7g0224271 | 30.923 | 401 | 240 | 7 | 891 | 1272 | 290 | 672 | 7.19e-52 | 195 |
Msa0603440 | MtrunA17_Chr7g0224271 | 30.846 | 402 | 219 | 7 | 233 | 590 | 286 | 672 | 7.57e-51 | 192 |
Msa0603440 | MtrunA17_Chr3g0125811 | 28.877 | 374 | 261 | 3 | 899 | 1272 | 201 | 569 | 8.48e-52 | 192 |
Msa0603440 | MtrunA17_Chr3g0125811 | 29.189 | 370 | 236 | 3 | 246 | 590 | 201 | 569 | 4.06e-46 | 176 |
Msa0603440 | MtrunA17_Chr4g0057891 | 29.412 | 408 | 257 | 8 | 880 | 1272 | 128 | 519 | 1.22e-51 | 191 |
Msa0603440 | MtrunA17_Chr4g0057891 | 27.604 | 384 | 230 | 8 | 245 | 590 | 146 | 519 | 3.00e-42 | 163 |
Msa0603440 | MtrunA17_Chr3g0110971 | 30.435 | 414 | 251 | 8 | 876 | 1272 | 193 | 586 | 8.02e-49 | 184 |
Msa0603440 | MtrunA17_Chr3g0110971 | 28.462 | 390 | 226 | 7 | 243 | 593 | 214 | 589 | 3.70e-39 | 155 |
Msa0603440 | MtrunA17_Chr2g0306641 | 30.412 | 388 | 248 | 6 | 891 | 1272 | 115 | 486 | 2.53e-48 | 181 |
Msa0603440 | MtrunA17_Chr2g0306641 | 32.316 | 393 | 225 | 10 | 243 | 607 | 120 | 499 | 1.49e-42 | 163 |
Msa0603440 | MtrunA17_Chr8g0376381 | 31.266 | 387 | 227 | 10 | 896 | 1272 | 164 | 521 | 1.20e-45 | 173 |
Msa0603440 | MtrunA17_Chr8g0376381 | 28.800 | 375 | 223 | 8 | 243 | 590 | 164 | 521 | 7.33e-38 | 150 |
Msa0603440 | MtrunA17_Chr7g0245601 | 30.270 | 370 | 240 | 7 | 905 | 1274 | 442 | 793 | 2.93e-45 | 176 |
Msa0603440 | MtrunA17_Chr7g0245601 | 28.962 | 366 | 223 | 7 | 252 | 593 | 442 | 794 | 1.43e-37 | 152 |
Msa0603440 | MtrunA17_Chr4g0038851 | 27.293 | 458 | 261 | 9 | 877 | 1272 | 21 | 468 | 7.67e-45 | 169 |
Msa0603440 | MtrunA17_Chr4g0038851 | 25.761 | 427 | 227 | 7 | 248 | 590 | 48 | 468 | 1.87e-35 | 142 |
Msa0603440 | MtrunA17_Chr4g0038761 | 27.763 | 371 | 254 | 4 | 905 | 1275 | 88 | 444 | 1.62e-42 | 162 |
Msa0603440 | MtrunA17_Chr4g0038761 | 26.703 | 367 | 228 | 8 | 252 | 590 | 88 | 441 | 4.26e-29 | 122 |
Msa0603440 | MtrunA17_Chr2g0294461 | 29.873 | 395 | 254 | 9 | 891 | 1272 | 200 | 584 | 3.70e-42 | 164 |
Msa0603440 | MtrunA17_Chr2g0294461 | 24.490 | 392 | 240 | 8 | 243 | 590 | 205 | 584 | 1.22e-27 | 119 |
Msa0603440 | MtrunA17_Chr5g0396491 | 27.356 | 435 | 246 | 10 | 898 | 1272 | 53 | 477 | 1.01e-40 | 157 |
Msa0603440 | MtrunA17_Chr5g0396491 | 33.810 | 210 | 132 | 2 | 248 | 456 | 56 | 259 | 9.01e-31 | 128 |
Msa0603440 | MtrunA17_Chr3g0085681 | 26.603 | 421 | 248 | 8 | 902 | 1272 | 26 | 435 | 3.78e-40 | 155 |
Msa0603440 | MtrunA17_Chr3g0085681 | 25.359 | 418 | 228 | 8 | 249 | 590 | 26 | 435 | 2.81e-32 | 131 |
Msa0603440 | MtrunA17_Chr4g0057291 | 26.735 | 389 | 263 | 10 | 896 | 1274 | 287 | 663 | 8.80e-39 | 155 |
Msa0603440 | MtrunA17_Chr4g0057291 | 23.857 | 503 | 323 | 13 | 125 | 590 | 182 | 661 | 2.21e-29 | 125 |
Msa0603440 | MtrunA17_Chr2g0294471 | 27.990 | 393 | 261 | 9 | 891 | 1272 | 194 | 575 | 2.86e-35 | 143 |
Msa0603440 | MtrunA17_Chr2g0294471 | 24.934 | 381 | 249 | 7 | 243 | 590 | 199 | 575 | 1.16e-27 | 119 |
Msa0603440 | MtrunA17_Chr1g0183641 | 27.763 | 389 | 245 | 14 | 893 | 1272 | 115 | 476 | 3.03e-35 | 141 |
Msa0603440 | MtrunA17_Chr1g0183641 | 26.579 | 380 | 228 | 13 | 243 | 591 | 118 | 477 | 1.62e-25 | 112 |
Msa0603440 | MtrunA17_Chr1g0200401 | 30.250 | 400 | 236 | 14 | 898 | 1272 | 77 | 458 | 1.85e-34 | 138 |
Msa0603440 | MtrunA17_Chr1g0200401 | 26.463 | 393 | 225 | 16 | 248 | 590 | 80 | 458 | 2.44e-21 | 99.0 |
Msa0603440 | MtrunA17_Chr3g0114841 | 26.733 | 404 | 264 | 10 | 890 | 1273 | 109 | 500 | 1.48e-32 | 134 |
Msa0603440 | MtrunA17_Chr3g0114841 | 25.000 | 380 | 228 | 11 | 257 | 590 | 131 | 499 | 1.99e-20 | 96.7 |
Msa0603440 | MtrunA17_Chr5g0401131 | 25.916 | 382 | 273 | 5 | 900 | 1274 | 113 | 491 | 9.21e-32 | 131 |
Msa0603440 | MtrunA17_Chr5g0401131 | 24.737 | 380 | 245 | 7 | 248 | 590 | 114 | 489 | 6.76e-22 | 100 |
Msa0603440 | MtrunA17_Chr4g0039661 | 27.198 | 364 | 239 | 9 | 917 | 1272 | 209 | 554 | 3.80e-31 | 130 |
Msa0603440 | MtrunA17_Chr4g0039661 | 28.075 | 374 | 232 | 10 | 245 | 590 | 190 | 554 | 5.93e-29 | 123 |
Msa0603440 | MtrunA17_Chr5g0401421 | 23.709 | 426 | 268 | 11 | 898 | 1275 | 32 | 448 | 2.90e-30 | 125 |
Msa0603440 | MtrunA17_Chr5g0401421 | 22.302 | 417 | 250 | 12 | 245 | 590 | 32 | 445 | 1.39e-15 | 80.9 |
Msa0603440 | MtrunA17_Chr5g0424131 | 28.499 | 393 | 246 | 12 | 902 | 1273 | 121 | 499 | 9.00e-30 | 125 |
Msa0603440 | MtrunA17_Chr5g0424131 | 27.703 | 296 | 187 | 10 | 234 | 511 | 108 | 394 | 1.78e-17 | 87.4 |
Msa0603440 | MtrunA17_Chr4g0053901 | 24.582 | 419 | 271 | 9 | 898 | 1275 | 56 | 470 | 1.15e-29 | 124 |
Msa0603440 | MtrunA17_Chr4g0053901 | 22.062 | 417 | 249 | 11 | 245 | 590 | 56 | 467 | 2.19e-15 | 80.5 |
Msa0603440 | MtrunA17_Chr7g0270031 | 28.205 | 390 | 257 | 12 | 891 | 1272 | 179 | 553 | 1.33e-29 | 125 |
Msa0603440 | MtrunA17_Chr7g0270031 | 24.474 | 380 | 245 | 8 | 243 | 590 | 184 | 553 | 8.62e-25 | 110 |
Msa0603440 | MtrunA17_Chr7g0236851 | 25.069 | 363 | 251 | 7 | 917 | 1273 | 310 | 657 | 5.92e-29 | 124 |
Msa0603440 | MtrunA17_Chr7g0236851 | 25.134 | 374 | 238 | 7 | 249 | 591 | 295 | 657 | 6.92e-25 | 111 |
Msa0603440 | MtrunA17_Chr6g0468561 | 26.289 | 388 | 253 | 12 | 899 | 1272 | 293 | 661 | 2.86e-28 | 122 |
Msa0603440 | MtrunA17_Chr6g0468561 | 25.266 | 376 | 243 | 8 | 246 | 590 | 293 | 661 | 8.97e-21 | 98.6 |
Msa0603440 | MtrunA17_Chr1g0194621 | 26.434 | 401 | 257 | 13 | 891 | 1272 | 136 | 517 | 6.89e-28 | 119 |
Msa0603440 | MtrunA17_Chr1g0194621 | 23.350 | 394 | 239 | 14 | 243 | 590 | 141 | 517 | 9.30e-21 | 97.8 |
Msa0603440 | MtrunA17_Chr8g0383981 | 27.047 | 403 | 253 | 17 | 886 | 1275 | 124 | 498 | 1.06e-27 | 119 |
Msa0603440 | MtrunA17_Chr8g0383981 | 25.157 | 318 | 201 | 12 | 245 | 548 | 136 | 430 | 6.78e-14 | 76.3 |
Msa0603440 | MtrunA17_Chr3g0085361 | 25.352 | 355 | 207 | 7 | 967 | 1272 | 4 | 349 | 1.90e-27 | 115 |
Msa0603440 | MtrunA17_Chr3g0085361 | 23.077 | 364 | 184 | 7 | 308 | 590 | 1 | 349 | 1.06e-20 | 95.5 |
Msa0603440 | MtrunA17_Chr2g0329591 | 25.667 | 300 | 213 | 4 | 901 | 1199 | 74 | 364 | 3.01e-21 | 98.6 |
Msa0603440 | MtrunA17_Chr2g0329591 | 26.471 | 272 | 187 | 4 | 248 | 514 | 74 | 337 | 9.95e-18 | 87.8 |
Msa0603440 | MtrunA17_Chr7g0230731 | 23.077 | 403 | 275 | 8 | 878 | 1272 | 352 | 727 | 4.11e-15 | 80.5 |
Msa0603440 | MtrunA17_Chr7g0230731 | 22.906 | 406 | 256 | 12 | 218 | 590 | 346 | 727 | 1.62e-14 | 78.6 |
Msa0603440 | MtrunA17_Chr7g0230771 | 22.475 | 396 | 286 | 7 | 878 | 1272 | 355 | 730 | 7.32e-15 | 79.7 |
Msa0603440 | MtrunA17_Chr7g0230771 | 22.660 | 406 | 257 | 12 | 218 | 590 | 349 | 730 | 2.55e-14 | 78.2 |
Msa0603440 | MtrunA17_Chr4g0012071 | 24.000 | 375 | 260 | 9 | 902 | 1272 | 197 | 550 | 3.00e-14 | 77.4 |
Msa0603440 | MtrunA17_Chr8g0344101 | 24.352 | 386 | 233 | 14 | 901 | 1259 | 223 | 576 | 1.34e-13 | 75.5 |
Msa0603440 | MtrunA17_Chr8g0344101 | 23.894 | 452 | 293 | 16 | 183 | 590 | 155 | 599 | 3.85e-13 | 73.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0603440 | AT1G07530.1 | 49.780 | 681 | 222 | 12 | 30 | 591 | 86 | 765 | 0.0 | 607 |
Msa0603440 | AT1G07530.1 | 47.151 | 702 | 287 | 17 | 636 | 1275 | 88 | 767 | 0.0 | 575 |
Msa0603440 | AT2G29060.2 | 46.676 | 692 | 295 | 18 | 598 | 1274 | 24 | 656 | 0.0 | 561 |
Msa0603440 | AT2G29060.2 | 48.244 | 655 | 247 | 16 | 2 | 591 | 28 | 655 | 0.0 | 558 |
Msa0603440 | AT2G29060.1 | 46.628 | 697 | 325 | 17 | 598 | 1274 | 24 | 693 | 0.0 | 557 |
Msa0603440 | AT2G29060.1 | 45.231 | 692 | 250 | 14 | 2 | 591 | 28 | 692 | 2.18e-179 | 546 |
Msa0603440 | AT2G29065.1 | 45.776 | 651 | 283 | 15 | 636 | 1275 | 39 | 630 | 1.87e-175 | 533 |
Msa0603440 | AT2G29065.1 | 45.557 | 619 | 259 | 17 | 27 | 591 | 34 | 628 | 7.15e-155 | 479 |
Msa0603440 | AT1G07520.2 | 51.136 | 528 | 240 | 8 | 754 | 1275 | 16 | 531 | 1.06e-172 | 523 |
Msa0603440 | AT1G07520.2 | 48.423 | 539 | 217 | 15 | 101 | 591 | 4 | 529 | 1.97e-142 | 443 |
Msa0603440 | AT1G07520.4 | 51.136 | 528 | 240 | 8 | 754 | 1275 | 16 | 531 | 1.06e-172 | 523 |
Msa0603440 | AT1G07520.4 | 48.423 | 539 | 217 | 15 | 101 | 591 | 4 | 529 | 1.97e-142 | 443 |
Msa0603440 | AT1G07520.1 | 46.037 | 656 | 307 | 12 | 636 | 1275 | 71 | 695 | 1.79e-172 | 528 |
Msa0603440 | AT1G07520.1 | 44.096 | 669 | 283 | 18 | 1 | 591 | 38 | 693 | 4.57e-153 | 477 |
Msa0603440 | AT1G07520.3 | 46.037 | 656 | 307 | 12 | 636 | 1275 | 72 | 696 | 1.87e-172 | 528 |
Msa0603440 | AT1G07520.3 | 44.096 | 669 | 283 | 18 | 1 | 591 | 39 | 694 | 4.97e-153 | 477 |
Msa0603440 | AT2G37650.2 | 43.510 | 678 | 324 | 19 | 623 | 1274 | 58 | 702 | 6.42e-161 | 498 |
Msa0603440 | AT2G37650.2 | 41.878 | 671 | 261 | 14 | 20 | 590 | 59 | 700 | 1.98e-151 | 473 |
Msa0603440 | AT2G37650.1 | 43.510 | 678 | 324 | 19 | 623 | 1274 | 70 | 714 | 7.21e-161 | 498 |
Msa0603440 | AT2G37650.1 | 41.878 | 671 | 261 | 14 | 20 | 590 | 71 | 712 | 2.33e-151 | 473 |
Msa0603440 | AT3G46600.3 | 50.111 | 451 | 208 | 5 | 825 | 1275 | 116 | 549 | 1.63e-146 | 455 |
Msa0603440 | AT3G46600.3 | 45.125 | 441 | 205 | 6 | 175 | 590 | 118 | 546 | 5.76e-120 | 384 |
Msa0603440 | AT3G46600.1 | 50.111 | 451 | 208 | 5 | 825 | 1275 | 148 | 581 | 3.09e-146 | 455 |
Msa0603440 | AT3G46600.1 | 45.476 | 431 | 200 | 4 | 185 | 590 | 158 | 578 | 7.58e-120 | 385 |
Msa0603440 | AT5G59450.1 | 47.071 | 495 | 238 | 8 | 789 | 1275 | 122 | 600 | 6.96e-144 | 450 |
Msa0603440 | AT5G59450.1 | 41.244 | 611 | 271 | 11 | 12 | 590 | 43 | 597 | 1.27e-137 | 433 |
Msa0603440 | AT3G46600.2 | 52.910 | 378 | 173 | 2 | 898 | 1275 | 1 | 373 | 5.11e-136 | 420 |
Msa0603440 | AT3G46600.2 | 48.787 | 371 | 164 | 2 | 245 | 590 | 1 | 370 | 1.49e-117 | 371 |
Msa0603440 | AT2G04890.1 | 32.181 | 376 | 243 | 4 | 897 | 1272 | 49 | 412 | 5.24e-59 | 209 |
Msa0603440 | AT2G04890.1 | 29.839 | 372 | 228 | 3 | 244 | 590 | 49 | 412 | 2.98e-49 | 181 |
Msa0603440 | AT1G50600.3 | 32.181 | 376 | 250 | 3 | 897 | 1272 | 155 | 525 | 3.58e-58 | 211 |
Msa0603440 | AT1G50600.3 | 30.914 | 372 | 231 | 2 | 244 | 590 | 155 | 525 | 8.07e-52 | 192 |
Msa0603440 | AT1G50600.1 | 32.181 | 376 | 250 | 3 | 897 | 1272 | 226 | 596 | 1.75e-57 | 210 |
Msa0603440 | AT1G50600.1 | 30.914 | 372 | 231 | 2 | 244 | 590 | 226 | 596 | 3.06e-51 | 192 |
Msa0603440 | AT1G50600.2 | 32.181 | 376 | 250 | 3 | 897 | 1272 | 230 | 600 | 1.87e-57 | 210 |
Msa0603440 | AT1G50600.2 | 30.914 | 372 | 231 | 2 | 244 | 590 | 230 | 600 | 3.59e-51 | 192 |
Msa0603440 | AT5G48150.1 | 30.585 | 376 | 257 | 3 | 897 | 1272 | 118 | 489 | 3.82e-56 | 204 |
Msa0603440 | AT5G48150.1 | 30.563 | 373 | 232 | 3 | 244 | 590 | 118 | 489 | 1.44e-49 | 184 |
Msa0603440 | AT5G48150.4 | 30.585 | 376 | 257 | 3 | 897 | 1272 | 118 | 489 | 3.82e-56 | 204 |
Msa0603440 | AT5G48150.4 | 30.563 | 373 | 232 | 3 | 244 | 590 | 118 | 489 | 1.44e-49 | 184 |
Msa0603440 | AT5G48150.2 | 30.585 | 376 | 257 | 3 | 897 | 1272 | 118 | 489 | 3.82e-56 | 204 |
Msa0603440 | AT5G48150.2 | 30.563 | 373 | 232 | 3 | 244 | 590 | 118 | 489 | 1.44e-49 | 184 |
Msa0603440 | AT5G48150.3 | 30.585 | 376 | 257 | 3 | 897 | 1272 | 118 | 489 | 3.82e-56 | 204 |
Msa0603440 | AT5G48150.3 | 30.563 | 373 | 232 | 3 | 244 | 590 | 118 | 489 | 1.44e-49 | 184 |
Msa0603440 | AT1G21450.1 | 28.665 | 457 | 311 | 7 | 820 | 1272 | 147 | 592 | 1.89e-53 | 198 |
Msa0603440 | AT1G21450.1 | 30.541 | 370 | 232 | 1 | 246 | 590 | 223 | 592 | 8.21e-48 | 181 |
Msa0603440 | AT4G17230.1 | 30.918 | 414 | 276 | 5 | 865 | 1274 | 119 | 526 | 1.19e-51 | 191 |
Msa0603440 | AT4G17230.1 | 30.159 | 378 | 237 | 3 | 243 | 594 | 153 | 529 | 3.71e-42 | 163 |
Msa0603440 | AT4G17230.2 | 30.918 | 414 | 276 | 5 | 865 | 1274 | 119 | 526 | 1.19e-51 | 191 |
Msa0603440 | AT4G17230.2 | 30.159 | 378 | 237 | 3 | 243 | 594 | 153 | 529 | 3.71e-42 | 163 |
Msa0603440 | AT1G66350.1 | 31.496 | 381 | 232 | 10 | 896 | 1272 | 150 | 505 | 1.62e-47 | 179 |
Msa0603440 | AT1G66350.1 | 29.570 | 372 | 222 | 10 | 243 | 590 | 150 | 505 | 1.74e-37 | 149 |
Msa0603440 | AT1G50420.1 | 25.694 | 432 | 257 | 5 | 898 | 1272 | 54 | 478 | 2.77e-46 | 174 |
Msa0603440 | AT1G50420.1 | 30.189 | 212 | 139 | 2 | 248 | 456 | 57 | 262 | 2.84e-28 | 120 |
Msa0603440 | AT3G54220.1 | 30.280 | 393 | 257 | 8 | 883 | 1274 | 275 | 651 | 1.29e-45 | 176 |
Msa0603440 | AT3G54220.1 | 28.610 | 367 | 220 | 8 | 252 | 590 | 297 | 649 | 9.38e-39 | 155 |
Msa0603440 | AT2G01570.1 | 30.208 | 384 | 239 | 10 | 896 | 1272 | 219 | 580 | 1.34e-45 | 175 |
Msa0603440 | AT2G01570.1 | 28.912 | 377 | 224 | 10 | 243 | 590 | 219 | 580 | 2.85e-34 | 140 |
Msa0603440 | AT1G14920.1 | 30.366 | 382 | 241 | 9 | 896 | 1272 | 167 | 528 | 1.91e-45 | 173 |
Msa0603440 | AT1G14920.1 | 29.867 | 375 | 223 | 9 | 243 | 590 | 167 | 528 | 3.44e-37 | 148 |
Msa0603440 | AT3G03450.1 | 28.982 | 383 | 250 | 9 | 896 | 1272 | 178 | 544 | 2.07e-45 | 173 |
Msa0603440 | AT3G03450.1 | 27.423 | 485 | 284 | 14 | 136 | 590 | 98 | 544 | 2.06e-39 | 155 |
Msa0603440 | AT5G17490.1 | 26.429 | 420 | 279 | 10 | 860 | 1272 | 119 | 515 | 8.04e-42 | 162 |
Msa0603440 | AT5G17490.1 | 28.831 | 385 | 213 | 11 | 243 | 590 | 155 | 515 | 1.90e-34 | 140 |
Msa0603440 | AT5G41920.1 | 28.346 | 381 | 252 | 6 | 895 | 1272 | 37 | 399 | 5.01e-41 | 157 |
Msa0603440 | AT5G41920.1 | 24.869 | 382 | 247 | 8 | 236 | 590 | 31 | 399 | 1.33e-27 | 117 |
Msa0603440 | AT5G66770.1 | 26.914 | 405 | 278 | 8 | 873 | 1272 | 192 | 583 | 1.60e-36 | 147 |
Msa0603440 | AT5G66770.1 | 29.620 | 368 | 222 | 8 | 252 | 590 | 224 | 583 | 3.98e-36 | 146 |
Msa0603440 | AT1G63100.1 | 31.231 | 333 | 215 | 8 | 897 | 1226 | 248 | 569 | 6.09e-36 | 146 |
Msa0603440 | AT1G63100.1 | 29.043 | 303 | 199 | 8 | 244 | 539 | 248 | 541 | 1.20e-22 | 105 |
Msa0603440 | AT1G63100.2 | 31.231 | 333 | 215 | 8 | 897 | 1226 | 273 | 594 | 9.05e-36 | 146 |
Msa0603440 | AT1G63100.2 | 29.043 | 303 | 199 | 8 | 244 | 539 | 273 | 566 | 1.23e-22 | 105 |
Msa0603440 | AT5G52510.1 | 26.410 | 390 | 255 | 10 | 899 | 1272 | 266 | 639 | 2.07e-35 | 144 |
Msa0603440 | AT5G52510.1 | 24.457 | 368 | 225 | 10 | 264 | 590 | 284 | 639 | 2.77e-22 | 103 |
Msa0603440 | AT4G37650.1 | 25.445 | 393 | 268 | 10 | 900 | 1274 | 145 | 530 | 2.51e-33 | 137 |
Msa0603440 | AT4G37650.1 | 24.742 | 388 | 244 | 8 | 247 | 590 | 145 | 528 | 1.27e-24 | 110 |
Msa0603440 | AT3G50650.1 | 29.102 | 323 | 210 | 5 | 910 | 1226 | 184 | 493 | 1.62e-32 | 134 |
Msa0603440 | AT3G50650.1 | 27.933 | 358 | 216 | 7 | 266 | 590 | 193 | 541 | 2.39e-29 | 125 |
Msa0603440 | AT3G49950.1 | 26.854 | 391 | 264 | 10 | 898 | 1274 | 27 | 409 | 5.28e-30 | 124 |
Msa0603440 | AT3G49950.1 | 25.722 | 381 | 244 | 10 | 248 | 591 | 30 | 408 | 1.40e-22 | 102 |
Msa0603440 | AT1G55580.1 | 25.060 | 419 | 255 | 11 | 898 | 1272 | 41 | 444 | 1.12e-25 | 112 |
Msa0603440 | AT1G55580.1 | 23.990 | 421 | 228 | 13 | 245 | 590 | 41 | 444 | 3.07e-19 | 92.8 |
Msa0603440 | AT4G08250.1 | 26.700 | 397 | 261 | 14 | 891 | 1272 | 95 | 476 | 3.30e-25 | 111 |
Msa0603440 | AT4G08250.1 | 24.937 | 397 | 257 | 13 | 229 | 591 | 88 | 477 | 2.83e-21 | 99.4 |
Msa0603440 | AT3G13840.1 | 23.256 | 430 | 254 | 16 | 871 | 1272 | 128 | 509 | 2.94e-14 | 77.8 |
Msa0603440 | AT3G13840.1 | 22.727 | 396 | 250 | 13 | 232 | 590 | 133 | 509 | 5.22e-12 | 70.5 |
Msa0603440 | AT4G00150.1 | 21.108 | 379 | 244 | 8 | 241 | 590 | 201 | 553 | 7.77e-11 | 67.0 |
Find 300 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGAATTAATGGACAAATTT+AGG | 0.087513 | 4_2:+47945867 | Msa0603440:CDS |
GATGAGATTTAAGAATTTAT+TGG | 0.142030 | 4_2:+47945496 | Msa0603440:CDS |
ACCCTCCATATCATTGATTT+TGG | 0.161875 | 4_2:+47945200 | Msa0603440:CDS |
ACTCTCCACATTGTAGATTT+TGG | 0.171656 | 4_2:+47940908 | Msa0603440:CDS |
TCCATTGAATTCGGAATTAA+TGG | 0.174492 | 4_2:+47945856 | Msa0603440:CDS |
AATCAATATGATAGCTTTCT+TGG | 0.191887 | 4_2:+47943958 | Msa0603440:CDS |
ATGCCATACCATCGCGTTAT+TGG | 0.192133 | 4_2:+47945411 | Msa0603440:CDS |
TGTAACCGGTGGTGGATTTA+AGG | 0.223081 | 4_2:+47940094 | Msa0603440:CDS |
CATTCTTTGCTACACGGTTT+AGG | 0.223208 | 4_2:+47945627 | Msa0603440:CDS |
AAATGCAGAACCGCATTTCT+AGG | 0.241890 | 4_2:-47945542 | None:intergenic |
TCTTCTTCTGTAGCATTGTT+TGG | 0.273251 | 4_2:-47939705 | None:intergenic |
TTACATTAACCAAATGCTTA+TGG | 0.276145 | 4_2:+47939773 | Msa0603440:CDS |
CTTCAAGTCCTCAACTTTGA+TGG | 0.287285 | 4_2:-47941143 | None:intergenic |
TTTGTTCAGTCAATTGTTAA+TGG | 0.288838 | 4_2:+47945590 | Msa0603440:CDS |
ATCAGAGTTATGAATATCTA+AGG | 0.292408 | 4_2:-47944223 | None:intergenic |
GAATTCCTTGGTTGTTGATT+TGG | 0.294509 | 4_2:+47940211 | Msa0603440:CDS |
AGTAGTATGTATAAAGATAT+TGG | 0.295160 | 4_2:-47941287 | None:intergenic |
AATGGAAGGTTCGGAATATA+AGG | 0.302414 | 4_2:+47941521 | Msa0603440:CDS |
CAAACAGCTTCCATTGAATT+CGG | 0.304465 | 4_2:+47945847 | Msa0603440:CDS |
ATTCTTTGCTACACGGTTTA+GGG | 0.306681 | 4_2:+47945628 | Msa0603440:CDS |
TTACTAAGCAAGTTTGAATC+AGG | 0.311461 | 4_2:-47940125 | None:intergenic |
GTCGGCAGCAGAGTTTCTTT+TGG | 0.312934 | 4_2:-47940783 | None:intergenic |
TGAATCATCCACTTTGGATA+TGG | 0.316268 | 4_2:+47944545 | Msa0603440:CDS |
TGCCATACCATCGCGTTATT+GGG | 0.330847 | 4_2:+47945412 | Msa0603440:CDS |
ACTCTATCCCGGTGATCTTC+AGG | 0.333841 | 4_2:-47945292 | None:intergenic |
ACAACCAAGGAATTCACTTT+AGG | 0.334697 | 4_2:-47940203 | None:intergenic |
CATCCACTTTGGATATGGTT+AGG | 0.338769 | 4_2:+47944550 | Msa0603440:CDS |
GGCAGGCCTGAAGCCAGGTT+GGG | 0.342579 | 4_2:-47941026 | None:intergenic |
GGATACCAAAATCAATGATA+TGG | 0.351602 | 4_2:-47945205 | None:intergenic |
AAAGAAGAAGCAAATAATTC+TGG | 0.356533 | 4_2:+47940512 | Msa0603440:CDS |
CGAGTCTTCCCTCCATTTGA+TGG | 0.357746 | 4_2:-47944810 | None:intergenic |
AGAAAGCTATCATATTGATT+TGG | 0.360772 | 4_2:-47943955 | None:intergenic |
CTTCCCTATAGAAGGTTATA+TGG | 0.365695 | 4_2:+47944011 | Msa0603440:CDS |
TGATCAGAAACAGCGGTATC+AGG | 0.368328 | 4_2:-47944315 | None:intergenic |
TTTATATGCTTCCACATGTT+GGG | 0.369926 | 4_2:+47945973 | Msa0603440:CDS |
TCAATGCTATTGCACAGAAA+TGG | 0.371102 | 4_2:+47941116 | Msa0603440:CDS |
CATATAAACAGTGGCAGGTT+AGG | 0.372839 | 4_2:+47945807 | Msa0603440:CDS |
GCTCTTGAAGCACGCATGGC+TGG | 0.373992 | 4_2:+47940728 | Msa0603440:CDS |
ATTGCTATTGCTGTTGCTGC+TGG | 0.378194 | 4_2:-47944253 | None:intergenic |
GGCCTTGAGGCACGCCTTGT+CGG | 0.379088 | 4_2:+47945011 | Msa0603440:CDS |
ATTAGCATTCCTGTTGTCAT+TGG | 0.384143 | 4_2:-47944910 | None:intergenic |
GATAAGGTGCTGCTTGGAAC+GGG | 0.386499 | 4_2:+47940440 | Msa0603440:intron |
CGCCTTGTCGGCGATGGTAC+TGG | 0.387590 | 4_2:+47945023 | Msa0603440:CDS |
CGGCAGGCCTGAAGCCAGGT+TGG | 0.388141 | 4_2:-47941027 | None:intergenic |
AGTAATAGCAGTAGCGATTT+CGG | 0.389012 | 4_2:+47940071 | Msa0603440:CDS |
ATGTATGTTTCATGATTCAT+TGG | 0.389528 | 4_2:+47939818 | Msa0603440:CDS |
TGTCTTCTTCCATAAGCATT+TGG | 0.390726 | 4_2:-47939782 | None:intergenic |
TTCCATTTCCTGTATGTCTC+TGG | 0.394619 | 4_2:-47941505 | None:intergenic |
ATTTCTCAACTTCATTCTAC+TGG | 0.395432 | 4_2:+47944372 | Msa0603440:CDS |
TAGTGATGGACTCAGAGATT+TGG | 0.396758 | 4_2:+47944398 | Msa0603440:CDS |
TTACTATTAAAACTATCATC+AGG | 0.396875 | 4_2:-47939909 | None:intergenic |
GCCGAGAGAGTCCAGGAGAC+AGG | 0.397232 | 4_2:+47941046 | Msa0603440:CDS |
CTTCTAAAAGAAGGAACAAA+AGG | 0.397285 | 4_2:-47940242 | None:intergenic |
ATATCTAAGGGGTGTTGATT+AGG | 0.398335 | 4_2:-47944210 | None:intergenic |
ATCCCGGTGATCTTCAGGTT+TGG | 0.401423 | 4_2:-47945287 | None:intergenic |
GGCCAGAGACATACAGGAAA+TGG | 0.403238 | 4_2:+47941503 | Msa0603440:CDS |
TCGCTAGATTCAAAATTGTA+TGG | 0.404227 | 4_2:-47940874 | None:intergenic |
TCTGTAGCATTGTTTGGAGC+TGG | 0.404262 | 4_2:-47939699 | None:intergenic |
TTTGGAGCTGGTTGAAGAAA+AGG | 0.410352 | 4_2:-47939687 | None:intergenic |
TTGTGGTGAATTCTGTTTGT+CGG | 0.410916 | 4_2:+47941185 | Msa0603440:CDS |
GACAGGCTTCAATATACATT+TGG | 0.411821 | 4_2:-47940820 | None:intergenic |
GCAGGCCTGAAGCCAGGTTG+GGG | 0.414806 | 4_2:-47941025 | None:intergenic |
ATTATCAGAGATGTTTGATA+AGG | 0.416031 | 4_2:+47944704 | Msa0603440:CDS |
AAGGGAGGTTCAGGAGGTAG+TGG | 0.418003 | 4_2:+47940262 | Msa0603440:intron |
AGAGAATCCGTTTGTGTTGA+AGG | 0.418700 | 4_2:+47944578 | Msa0603440:CDS |
TTTATACATACTACTGTCAA+TGG | 0.418864 | 4_2:+47941295 | Msa0603440:CDS |
TCCATTAATTCCGAATTCAA+TGG | 0.422266 | 4_2:-47945857 | None:intergenic |
CAATGCTATTGCACAGAAAT+GGG | 0.422432 | 4_2:+47941117 | Msa0603440:CDS |
CTCTTGAAGCACGCATGGCT+GGG | 0.426919 | 4_2:+47940729 | Msa0603440:CDS |
GCAATAGCATTGAACTCAAA+TGG | 0.428641 | 4_2:-47941106 | None:intergenic |
GCCACTACCTTCCCTATAGA+AGG | 0.428776 | 4_2:+47944003 | Msa0603440:CDS |
GTCTCCTGGACTCTCTCGGC+AGG | 0.430954 | 4_2:-47941043 | None:intergenic |
GAGGCCATATAACCTTCTAT+AGG | 0.431388 | 4_2:-47944015 | None:intergenic |
CTGCCACTGTTTATATGTCT+CGG | 0.432575 | 4_2:-47945801 | None:intergenic |
TTGAACCGTGTCGCAAAGAA+TGG | 0.433149 | 4_2:-47941331 | None:intergenic |
GTAGTATGTATAAAGATATT+GGG | 0.433213 | 4_2:-47941286 | None:intergenic |
AGGAGGAAGCGTAAATTATT+CGG | 0.433733 | 4_2:-47941672 | None:intergenic |
TTTCAAGCTACTTCAATGAA+TGG | 0.435532 | 4_2:+47940038 | Msa0603440:intron |
ATGAGCTACTGAAGCAGATT+AGG | 0.435797 | 4_2:+47944931 | Msa0603440:CDS |
GCATCCGTTACGGCTTTCAA+TGG | 0.436217 | 4_2:+47940930 | Msa0603440:CDS |
CCTCCTAAGCTGCTCTTGAC+AGG | 0.440626 | 4_2:+47940992 | Msa0603440:CDS |
AATTTACGCTTCCTCCTGTT+GGG | 0.441011 | 4_2:+47941678 | Msa0603440:CDS |
CTAGGCGAAGCCCTGTCTCC+TGG | 0.442369 | 4_2:-47941057 | None:intergenic |
TAATTTCAAAACAGCATCCC+TGG | 0.447641 | 4_2:-47941248 | None:intergenic |
AGGCAACATTCTTCACCCTC+TGG | 0.447707 | 4_2:+47944951 | Msa0603440:CDS |
CTGTATATGCCAATGACAAC+AGG | 0.450042 | 4_2:+47944901 | Msa0603440:CDS |
TGCAAGCTTCTTGAATGGAC+AGG | 0.451062 | 4_2:-47940837 | None:intergenic |
TTGGAGCTGGTTGAAGAAAA+GGG | 0.451298 | 4_2:-47939686 | None:intergenic |
AAATCATTCTATGAAGTCAT+TGG | 0.453169 | 4_2:+47939858 | Msa0603440:CDS |
AGAATGAAACAATAGATTTG+AGG | 0.453249 | 4_2:+47944853 | Msa0603440:CDS |
CTCTCGGCAGGCCTGAAGCC+AGG | 0.453760 | 4_2:-47941031 | None:intergenic |
GGCAACATTCTTCACCCTCT+GGG | 0.453926 | 4_2:+47944952 | Msa0603440:CDS |
AAGGCAATATTCTTCTCCAC+TGG | 0.454228 | 4_2:+47940667 | Msa0603440:CDS |
ATGGAAAGAATCGAAGAAAC+TGG | 0.455010 | 4_2:+47945338 | Msa0603440:CDS |
TTTCTTGGTGCTGATCCACT+TGG | 0.458368 | 4_2:+47943973 | Msa0603440:CDS |
TCGAGAGGCCAGAGACATAC+AGG | 0.459712 | 4_2:+47941497 | Msa0603440:CDS |
GTTTCTTCGATTCTTTCCAT+TGG | 0.459734 | 4_2:-47945335 | None:intergenic |
TTCAAGAAAAGTTTAGAAGA+AGG | 0.460061 | 4_2:+47944480 | Msa0603440:CDS |
AGGCCATATAACCTTCTATA+GGG | 0.460382 | 4_2:-47944014 | None:intergenic |
ATCCCTGTCAAGAGCAGCTT+AGG | 0.460560 | 4_2:-47940995 | None:intergenic |
GTCCTATGCAGGTACCCAAC+AGG | 0.461795 | 4_2:-47941692 | None:intergenic |
ATCCACTTTGGATATGGTTA+GGG | 0.463279 | 4_2:+47944551 | Msa0603440:CDS |
ATTCTTTGCGACACGGTTCA+AGG | 0.463902 | 4_2:+47941333 | Msa0603440:CDS |
TTTCTACCCTTCAACACAAA+CGG | 0.464697 | 4_2:-47944585 | None:intergenic |
GAAGCACGCATGGCTGGGAC+TGG | 0.468425 | 4_2:+47940734 | Msa0603440:CDS |
AGTAGCGATTTCGGTGTAAC+CGG | 0.469350 | 4_2:+47940080 | Msa0603440:CDS |
CAGTCATTTGTAAGCTAAGT+GGG | 0.470257 | 4_2:-47944140 | None:intergenic |
GTGGTAACATTGCTGTAACT+TGG | 0.472903 | 4_2:-47945891 | None:intergenic |
AGAAGAAGAAGATTCACCTT+TGG | 0.473696 | 4_2:+47939719 | Msa0603440:CDS |
AGGTTATATGGCCTCGGCGA+CGG | 0.474767 | 4_2:+47944023 | Msa0603440:CDS |
AGAAAGGAAGAAAAGGCTAA+TGG | 0.474775 | 4_2:+47940467 | Msa0603440:CDS |
CATACAGGAAATGGAAGGTT+CGG | 0.475232 | 4_2:+47941512 | Msa0603440:CDS |
GACAACAATTGGATGCTTCA+AGG | 0.476004 | 4_2:+47945935 | Msa0603440:CDS |
GGGATAGAGTTCCCTTTACC+TGG | 0.477006 | 4_2:+47945305 | Msa0603440:CDS |
GTAGAGATCCTCTTGGTGTT+CGG | 0.479560 | 4_2:-47945068 | None:intergenic |
GAATGAAGTTGAGAAATAGC+AGG | 0.479774 | 4_2:-47944366 | None:intergenic |
TGAACCGTGTCGCAAAGAAT+GGG | 0.479940 | 4_2:-47941330 | None:intergenic |
AAGAACAAGAAGAAGAAGCT+TGG | 0.480178 | 4_2:+47944637 | Msa0603440:CDS |
ATGAATGCAAGCTTCTTGAA+TGG | 0.481139 | 4_2:-47940842 | None:intergenic |
TAATTTACGCTTCCTCCTGT+TGG | 0.482014 | 4_2:+47941677 | Msa0603440:CDS |
TTCAGGAGGTAGTGGTTGAG+AGG | 0.482313 | 4_2:+47940270 | Msa0603440:intron |
AACAGCGGTATCAGGTGAAA+GGG | 0.482883 | 4_2:-47944307 | None:intergenic |
TGCCACTGTTTATATGTCTC+GGG | 0.483709 | 4_2:-47945800 | None:intergenic |
TCAGGGCTTTGTACAGAAGA+AGG | 0.485059 | 4_2:-47939891 | None:intergenic |
CCGCAGCCTCAACTCTTGAC+TGG | 0.485147 | 4_2:+47944519 | Msa0603440:CDS |
GAGGAGTCACCTCCATCAAA+TGG | 0.486751 | 4_2:+47944798 | Msa0603440:CDS |
TTGGCTCATTACTTTGCCAA+TGG | 0.490767 | 4_2:+47944990 | Msa0603440:CDS |
TTGGACGAAAACCAGGTAAA+GGG | 0.491920 | 4_2:-47945316 | None:intergenic |
ACAATTGGATGCTTCAAGGT+TGG | 0.492282 | 4_2:+47945939 | Msa0603440:CDS |
CTTTCCATTGGACGAAAACC+AGG | 0.495527 | 4_2:-47945323 | None:intergenic |
TGGATTTAAGCAACTCCCCT+TGG | 0.498423 | 4_2:+47941546 | Msa0603440:CDS |
GAAAGGAAGAAAAGGCTAAT+GGG | 0.502907 | 4_2:+47940468 | Msa0603440:CDS |
GAAAATGATTCCTTGCAGAA+TGG | 0.503064 | 4_2:+47944762 | Msa0603440:CDS |
TTGGCCACTGAAAACCATAT+AGG | 0.503360 | 4_2:-47945226 | None:intergenic |
TGGGGATGGACCACAGAGGT+TGG | 0.505585 | 4_2:+47944971 | Msa0603440:CDS |
GATTTCGGTGTAACCGGTGG+TGG | 0.506809 | 4_2:+47940086 | Msa0603440:CDS |
TCTTCCTAAAGTGAATTCCT+TGG | 0.507125 | 4_2:+47940199 | Msa0603440:CDS |
TCAGGAGGTAGTGGTTGAGA+GGG | 0.507729 | 4_2:+47940271 | Msa0603440:intron |
CCGGTGATCTTCAGGTTTGG+AGG | 0.507786 | 4_2:-47945284 | None:intergenic |
CAGGCCTGCCGAGAGAGTCC+AGG | 0.510078 | 4_2:+47941039 | Msa0603440:CDS |
TTCCCAATAACGCGATGGTA+TGG | 0.510255 | 4_2:-47945414 | None:intergenic |
GCAGAATGGACAAGTGAAAA+CGG | 0.510872 | 4_2:+47944776 | Msa0603440:CDS |
AAGGCGTGCCTCAAGGCCAT+TGG | 0.511609 | 4_2:-47945006 | None:intergenic |
GATAAACGATAAATAAGGGC+AGG | 0.512065 | 4_2:-47940953 | None:intergenic |
ATGAGTTATTGAGGCAGATA+AGG | 0.512815 | 4_2:+47940648 | Msa0603440:CDS |
TATTCTTCTCCACTGGGTGA+TGG | 0.514009 | 4_2:+47940674 | Msa0603440:CDS |
TATAGAAGGTTATATGGCCT+CGG | 0.515236 | 4_2:+47944017 | Msa0603440:CDS |
TTATACATACTACTGTCAAT+GGG | 0.515737 | 4_2:+47941296 | Msa0603440:CDS |
CATTCTTCACCCTCTGGGGA+TGG | 0.516297 | 4_2:+47944957 | Msa0603440:CDS |
CTGCATGCTGCAAGGATGGA+AGG | 0.517952 | 4_2:+47941648 | Msa0603440:CDS |
GGGGAGGAAGAATCACGAGC+GGG | 0.521175 | 4_2:+47940331 | Msa0603440:CDS |
AAGAAACTCTGCTGCCGACA+TGG | 0.522015 | 4_2:+47940787 | Msa0603440:CDS |
TGTTGCCTTGTTTCTTACCA+CGG | 0.522059 | 4_2:-47940547 | None:intergenic |
AACGTTCACAATACCTTGCT+AGG | 0.524003 | 4_2:-47941075 | None:intergenic |
CCGAGAGAGTCCAGGAGACA+GGG | 0.524887 | 4_2:+47941047 | Msa0603440:CDS |
TTGGGAAACAATTCGAGTTG+AGG | 0.525214 | 4_2:+47945430 | Msa0603440:CDS |
CGCCGACAAGGCGTGCCTCA+AGG | 0.525318 | 4_2:-47945013 | None:intergenic |
CAGGCCTGAAGCCAGGTTGG+GGG | 0.525521 | 4_2:-47941024 | None:intergenic |
CTAAACCGTGTAGCAAAGAA+TGG | 0.525919 | 4_2:-47945626 | None:intergenic |
TCAGTCATTTGTAAGCTAAG+TGG | 0.527232 | 4_2:-47944141 | None:intergenic |
GGATTCTTCTATTACACAGA+TGG | 0.528072 | 4_2:+47944419 | Msa0603440:CDS |
TGAACCTCCCTTCTAAAAGA+AGG | 0.528231 | 4_2:-47940251 | None:intergenic |
GGTATGGCATTAAACTCAAA+GGG | 0.528598 | 4_2:-47945398 | None:intergenic |
ATCGTTTATCAAAACGACCT+GGG | 0.530234 | 4_2:+47940966 | Msa0603440:CDS |
ATTGGACGAAAACCAGGTAA+AGG | 0.530391 | 4_2:-47945317 | None:intergenic |
CATTAAACTCAAAGGGAACA+TGG | 0.533197 | 4_2:-47945391 | None:intergenic |
GAAGCAAATAATTCTGGTGG+TGG | 0.534103 | 4_2:+47940518 | Msa0603440:CDS |
TACCACGCGAAAACAAATAC+AGG | 0.534979 | 4_2:+47945699 | Msa0603440:CDS |
CGAGACATATAAACAGTGGC+AGG | 0.537307 | 4_2:+47945802 | Msa0603440:CDS |
CAGGTTAGGAATACAAGAGC+TGG | 0.537591 | 4_2:+47945821 | Msa0603440:CDS |
CTCCCTAACCATATCCAAAG+TGG | 0.538149 | 4_2:-47944553 | None:intergenic |
TGATAAGGTGCTGCTTGGAA+CGG | 0.538662 | 4_2:+47940439 | Msa0603440:intron |
GAAACTGCATGCTGCAAGGA+TGG | 0.539727 | 4_2:+47941644 | Msa0603440:CDS |
GGGTGATGGATCTCAGAGGC+TGG | 0.539936 | 4_2:+47940688 | Msa0603440:CDS |
CTGTTTGATAAGGTGCTGCT+TGG | 0.542358 | 4_2:+47940434 | Msa0603440:intron |
GAGAAATCAATTTCATCCAA+AGG | 0.543170 | 4_2:-47939735 | None:intergenic |
GCTTGGAACGGGGTGCAGAA+AGG | 0.543390 | 4_2:+47940451 | Msa0603440:CDS |
GTCAAGAGTTGAGGCTGCGG+AGG | 0.544335 | 4_2:-47944516 | None:intergenic |
AAACAGCGGTATCAGGTGAA+AGG | 0.544940 | 4_2:-47944308 | None:intergenic |
CACTTTGGATATGGTTAGGG+AGG | 0.545160 | 4_2:+47944554 | Msa0603440:CDS |
CCCTGTCTCCTGGACTCTCT+CGG | 0.545286 | 4_2:-47941047 | None:intergenic |
TTAATGAGATGTTTATCCAA+GGG | 0.545301 | 4_2:-47941562 | None:intergenic |
GTTAATGAGATGTTTATCCA+AGG | 0.545722 | 4_2:-47941563 | None:intergenic |
GAGAATCCGTTTGTGTTGAA+GGG | 0.545933 | 4_2:+47944579 | Msa0603440:CDS |
CTCCAGTACCATCGCCGACA+AGG | 0.546196 | 4_2:-47945025 | None:intergenic |
AATGAAGTTGAGAAATAGCA+GGG | 0.546812 | 4_2:-47944365 | None:intergenic |
TTAGATATTCATAACTCTGA+TGG | 0.546938 | 4_2:+47944225 | Msa0603440:CDS |
CATTCTACTGGTGTTAGTGA+TGG | 0.548607 | 4_2:+47944384 | Msa0603440:CDS |
CCTGTCAAGAGCAGCTTAGG+AGG | 0.549308 | 4_2:-47940992 | None:intergenic |
GTTCATAAACCAAATCCTGA+TGG | 0.550468 | 4_2:+47944086 | Msa0603440:CDS |
TACTATTAAAACTATCATCA+GGG | 0.551246 | 4_2:-47939908 | None:intergenic |
TCAGAGTTATGAATATCTAA+GGG | 0.551258 | 4_2:-47944222 | None:intergenic |
TACCAAAATCAATGATATGG+AGG | 0.553791 | 4_2:-47945202 | None:intergenic |
CTCCAAACCTGAAGATCACC+GGG | 0.554977 | 4_2:+47945285 | Msa0603440:CDS |
TGGTATGGCATTAAACTCAA+AGG | 0.555962 | 4_2:-47945399 | None:intergenic |
CAGTTGTGTTGAATAGTCCC+AGG | 0.555999 | 4_2:+47941230 | Msa0603440:CDS |
AAGGTTCGGAATATAAGGGC+TGG | 0.559644 | 4_2:+47941526 | Msa0603440:CDS |
AGGTAAAGGGAACTCTATCC+CGG | 0.560031 | 4_2:-47945303 | None:intergenic |
CCTCCAAACCTGAAGATCAC+CGG | 0.561178 | 4_2:+47945284 | Msa0603440:CDS |
ACCGGTGGTGGATTTAAGGA+TGG | 0.561936 | 4_2:+47940098 | Msa0603440:CDS |
AAATCAGTGTCTTCGAGGGA+AGG | 0.562271 | 4_2:-47944048 | None:intergenic |
ATGGAAGGTTCGGAATATAA+GGG | 0.563303 | 4_2:+47941522 | Msa0603440:CDS |
TTCTAAAAGAAGGAACAAAA+GGG | 0.563412 | 4_2:-47940241 | None:intergenic |
GAGGCACGCCTTGTCGGCGA+TGG | 0.563864 | 4_2:+47945017 | Msa0603440:CDS |
ATGAACGTTGTAGCTTGTGA+AGG | 0.570356 | 4_2:+47945758 | Msa0603440:CDS |
GGGGTGCAGAAAGGAAGAAA+AGG | 0.571641 | 4_2:+47940460 | Msa0603440:CDS |
CCAGTCAAGAGTTGAGGCTG+CGG | 0.571987 | 4_2:-47944519 | None:intergenic |
TATCGTTTATCAAAACGACC+TGG | 0.572065 | 4_2:+47940965 | Msa0603440:CDS |
ATTCGCCATTCTTTGCTACA+CGG | 0.575217 | 4_2:+47945621 | Msa0603440:CDS |
CTCCTAAGCTGCTCTTGACA+GGG | 0.575690 | 4_2:+47940993 | Msa0603440:CDS |
AGGCAACAAGAAGGGTGTTG+TGG | 0.575933 | 4_2:+47940562 | Msa0603440:CDS |
GTCTGTGTTGCAATTTGAGA+GGG | 0.576245 | 4_2:+47940154 | Msa0603440:CDS |
CATATAACCTTCTATAGGGA+AGG | 0.576430 | 4_2:-47944010 | None:intergenic |
TGGATGCTTCAAGGTTGGAA+AGG | 0.577566 | 4_2:+47945944 | Msa0603440:CDS |
TCTTGGTGTTCGGAGAGGAA+TGG | 0.578017 | 4_2:-47945058 | None:intergenic |
TGCATGCTGCAAGGATGGAA+GGG | 0.578283 | 4_2:+47941649 | Msa0603440:CDS |
AATTTCAAAACAGCATCCCT+GGG | 0.578395 | 4_2:-47941247 | None:intergenic |
AATGCTTATGGAAGAAGACA+TGG | 0.578952 | 4_2:+47939785 | Msa0603440:CDS |
CTCAGCAGTAGAGATCCTCT+TGG | 0.580706 | 4_2:-47945075 | None:intergenic |
ACCTTCTATAGGGAAGGTAG+TGG | 0.581330 | 4_2:-47944004 | None:intergenic |
GAATGCTCTTGAAGCACGCA+TGG | 0.581409 | 4_2:+47940724 | Msa0603440:CDS |
GTGATGTGAGTTGATTATGC+TGG | 0.583220 | 4_2:-47945998 | None:intergenic |
TCGTTTATCAAAACGACCTG+GGG | 0.584413 | 4_2:+47940967 | Msa0603440:CDS |
ATGCCCCATTCTTTGCGACA+CGG | 0.584723 | 4_2:+47941326 | Msa0603440:CDS |
GGGAGGAAGAATCACGAGCG+GGG | 0.584989 | 4_2:+47940332 | Msa0603440:CDS |
GGGTGTTGATTAGGAGAACG+AGG | 0.585085 | 4_2:-47944201 | None:intergenic |
AGAAGGGTGTTGTGGATCTG+AGG | 0.585113 | 4_2:+47940570 | Msa0603440:CDS |
AGACAGGGCTTCGCCTAGCA+AGG | 0.589816 | 4_2:+47941062 | Msa0603440:CDS |
CTTTGCTACACGGTTTAGGG+AGG | 0.591419 | 4_2:+47945631 | Msa0603440:CDS |
ATGGAAGCGCTTGCAATAGT+CGG | 0.593097 | 4_2:-47945372 | None:intergenic |
TTACTTTGCCAATGGCCTTG+AGG | 0.593344 | 4_2:+47944998 | Msa0603440:CDS |
ATGGGAAACCATCAAAGTTG+AGG | 0.594978 | 4_2:+47941135 | Msa0603440:CDS |
AAGAAACAAGGCAACAAGAA+GGG | 0.596770 | 4_2:+47940554 | Msa0603440:CDS |
AGGCAATATTCTTCTCCACT+GGG | 0.596774 | 4_2:+47940668 | Msa0603440:CDS |
AAACAAATACAGGATGCTGA+TGG | 0.598030 | 4_2:+47945709 | Msa0603440:CDS |
TTGGTACGCTTTCACCATGT+CGG | 0.598816 | 4_2:-47940801 | None:intergenic |
CTCTGTGGTCCATCCCCAGA+GGG | 0.598960 | 4_2:-47944966 | None:intergenic |
TCCATCCTTAAATCCACCAC+CGG | 0.599728 | 4_2:-47940099 | None:intergenic |
CAAATGCTAATGAGTTATTG+AGG | 0.600348 | 4_2:+47940639 | Msa0603440:CDS |
CAGGGCTTTGTACAGAAGAA+GGG | 0.601972 | 4_2:-47939890 | None:intergenic |
CAGGCCATTGAAAGCCGTAA+CGG | 0.602915 | 4_2:-47940934 | None:intergenic |
TTTCACTTGTCCATTCTGCA+AGG | 0.603209 | 4_2:-47944772 | None:intergenic |
AGCTTGTGAAGGTTCTCAGA+GGG | 0.603648 | 4_2:+47941474 | Msa0603440:intron |
GCAATTTGAGAGGGGTGTCG+AGG | 0.606778 | 4_2:+47940163 | Msa0603440:CDS |
ACCAAAATCAATGATATGGA+GGG | 0.610467 | 4_2:-47945201 | None:intergenic |
TGTGGATCTGAGGACAATGT+TGG | 0.619556 | 4_2:+47940580 | Msa0603440:CDS |
ATACAGGATGCTGATGGAGA+GGG | 0.620955 | 4_2:+47945715 | Msa0603440:CDS |
AAGCTAAGTGGGTCATAGAA+CGG | 0.623038 | 4_2:-47944129 | None:intergenic |
GAAGAAGCAAATAATTCTGG+TGG | 0.623065 | 4_2:+47940515 | Msa0603440:CDS |
TAATGAGATGTTTATCCAAG+GGG | 0.623159 | 4_2:-47941561 | None:intergenic |
ATTGTTTCCCAATAACGCGA+TGG | 0.623674 | 4_2:-47945419 | None:intergenic |
GGAAGAAAAGGCTAATGGGT+CGG | 0.623814 | 4_2:+47940472 | Msa0603440:CDS |
TAAGAAACAAGGCAACAAGA+AGG | 0.624363 | 4_2:+47940553 | Msa0603440:CDS |
GTTAATGTAACGAAGAACAG+TGG | 0.624527 | 4_2:-47939760 | None:intergenic |
AGCGATTTCGGTGTAACCGG+TGG | 0.625322 | 4_2:+47940083 | Msa0603440:CDS |
GTCTTCCCTCCATTTGATGG+AGG | 0.626646 | 4_2:-47944807 | None:intergenic |
GAGTCACCTCCATCAAATGG+AGG | 0.628730 | 4_2:+47944801 | Msa0603440:CDS |
TCAAAACCAGTCAAGAGTTG+AGG | 0.630836 | 4_2:-47944525 | None:intergenic |
AAAAGCCGTGGTAAGAAACA+AGG | 0.633423 | 4_2:+47940542 | Msa0603440:CDS |
AATACAGGATGCTGATGGAG+AGG | 0.637418 | 4_2:+47945714 | Msa0603440:CDS |
AATGAATCATGAAACATACA+TGG | 0.637630 | 4_2:-47939816 | None:intergenic |
ATTCCTCTCCGAACACCAAG+AGG | 0.643154 | 4_2:+47945060 | Msa0603440:CDS |
AGTCACCTCCATCAAATGGA+GGG | 0.643984 | 4_2:+47944802 | Msa0603440:CDS |
CCTCTGTGGTCCATCCCCAG+AGG | 0.644825 | 4_2:-47944967 | None:intergenic |
GCAACATTCTTCACCCTCTG+GGG | 0.646104 | 4_2:+47944953 | Msa0603440:CDS |
TTATGCTGGCACCCAACATG+TGG | 0.647174 | 4_2:-47945984 | None:intergenic |
GAACCGTGTCGCAAAGAATG+GGG | 0.648096 | 4_2:-47941329 | None:intergenic |
AAGGTTTAGAGAGAGTTGAG+AGG | 0.649221 | 4_2:+47945777 | Msa0603440:CDS |
AAGACTCGTCGTAAGAAACA+AGG | 0.649427 | 4_2:+47944825 | Msa0603440:CDS |
CACTGGGTGATGGATCTCAG+AGG | 0.650910 | 4_2:+47940684 | Msa0603440:CDS |
GATGGAAACTGCATGCTGCA+AGG | 0.652853 | 4_2:+47941640 | Msa0603440:CDS |
ACAGCGGTATCAGGTGAAAG+GGG | 0.655960 | 4_2:-47944306 | None:intergenic |
AGTCTGTGTTGCAATTTGAG+AGG | 0.657162 | 4_2:+47940153 | Msa0603440:CDS |
CTTTGCGACACGGTTCAAGG+AGG | 0.657665 | 4_2:+47941336 | Msa0603440:CDS |
AAGGTTCTCAGAGGGTCGAG+AGG | 0.658012 | 4_2:+47941482 | Msa0603440:intron |
GATCCTCTTGGTGTTCGGAG+AGG | 0.659641 | 4_2:-47945063 | None:intergenic |
AGTTGTGTTGAATAGTCCCA+GGG | 0.661922 | 4_2:+47941231 | Msa0603440:CDS |
AGAGACATACAGGAAATGGA+AGG | 0.664271 | 4_2:+47941507 | Msa0603440:CDS |
AGCTATTAGTGCTATTGACG+AGG | 0.669842 | 4_2:+47944677 | Msa0603440:CDS |
ATAAGGTGCTGCTTGGAACG+GGG | 0.670615 | 4_2:+47940441 | Msa0603440:intron |
CAATAGCAATAGCAGCGTCG+AGG | 0.672364 | 4_2:+47944266 | Msa0603440:CDS |
CAGAGTTATGAATATCTAAG+GGG | 0.672632 | 4_2:-47944221 | None:intergenic |
AGCAAACAGTCCTAGAAATG+CGG | 0.677440 | 4_2:+47945532 | Msa0603440:CDS |
ATGAAGTTGAGAAATAGCAG+GGG | 0.678292 | 4_2:-47944364 | None:intergenic |
GGATGCCAAAATCTACAATG+TGG | 0.681308 | 4_2:-47940913 | None:intergenic |
AAGTAATGAGCCAACCTCTG+TGG | 0.682694 | 4_2:-47944981 | None:intergenic |
CTATGCAGGTACCCAACAGG+AGG | 0.684912 | 4_2:-47941689 | None:intergenic |
TCTGTGTTGCAATTTGAGAG+GGG | 0.685234 | 4_2:+47940155 | Msa0603440:CDS |
GAGGGAAGGATCCGTCGCCG+AGG | 0.685761 | 4_2:-47944034 | None:intergenic |
TCTTAAAATCAAGAGCAATG+AGG | 0.688807 | 4_2:+47945454 | Msa0603440:CDS |
GTAGTGGCTGCAAAGCCAAG+TGG | 0.693207 | 4_2:-47943988 | None:intergenic |
ATGCTTATGGAAGAAGACAT+GGG | 0.694678 | 4_2:+47939786 | Msa0603440:CDS |
TAGCTTGTGAAGGTTCTCAG+AGG | 0.697926 | 4_2:+47941473 | Msa0603440:intron |
GGCCCGAGACATATAAACAG+TGG | 0.698214 | 4_2:+47945798 | Msa0603440:CDS |
CGTTTATCAAAACGACCTGG+GGG | 0.713845 | 4_2:+47940968 | Msa0603440:CDS |
CTGATGGAGAGGGAAAGTAT+CGG | 0.714910 | 4_2:+47945725 | Msa0603440:CDS |
ATTAACATGATCAGAAACAG+CGG | 0.729969 | 4_2:-47944322 | None:intergenic |
CTCTGAGATCCATCACCCAG+TGG | 0.732644 | 4_2:-47940683 | None:intergenic |
GAATGGACAAGTGAAAACGG+AGG | 0.763230 | 4_2:+47944779 | Msa0603440:CDS |
CCTCTGGGGATGGACCACAG+AGG | 0.797161 | 4_2:+47944967 | Msa0603440:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTTTCAAATGATTAT+TGG | + | chr4_2:47942166-47942185 | Msa0603440:intron | 10.0% |
!!! | TTTTGATAAACGATAAATAA+GGG | - | chr4_2:47940960-47940979 | None:intergenic | 15.0% |
!! | AAATCCTGATATTTAATTAT+AGG | - | chr4_2:47942492-47942511 | None:intergenic | 15.0% |
!!! | AACTATTTGTTAAATATGTT+TGG | - | chr4_2:47942741-47942760 | None:intergenic | 15.0% |
!!! | ATTTGTTAGATTTATTTGAA+GGG | - | chr4_2:47943141-47943160 | None:intergenic | 15.0% |
!!! | TATTTGTTAGATTTATTTGA+AGG | - | chr4_2:47943142-47943161 | None:intergenic | 15.0% |
!! | CAAATAAATCTAACAAATAT+TGG | + | chr4_2:47943143-47943162 | Msa0603440:intron | 15.0% |
!! | ATATTATTATGTCTATGTAT+TGG | + | chr4_2:47943323-47943342 | Msa0603440:intron | 15.0% |
!! | AAAAGAAAATGATAAAACAT+GGG | - | chr4_2:47943381-47943400 | None:intergenic | 15.0% |
!!! | AAGTAATATTTAGGATATTT+AGG | - | chr4_2:47943453-47943472 | None:intergenic | 15.0% |
!! | AATAATGCAAAGTAATATTT+AGG | - | chr4_2:47943462-47943481 | None:intergenic | 15.0% |
!! | CATGAACATAATAAATAAAA+TGG | - | chr4_2:47943697-47943716 | None:intergenic | 15.0% |
!! | GATAAAAACTTTATAAGTAT+TGG | - | chr4_2:47945248-47945267 | None:intergenic | 15.0% |
!! | TACTATTAAAACTATCATCA+GGG | - | chr4_2:47939911-47939930 | None:intergenic | 20.0% |
!! | TTACTATTAAAACTATCATC+AGG | - | chr4_2:47939912-47939931 | None:intergenic | 20.0% |
!!! | GTTTTGATAAACGATAAATA+AGG | - | chr4_2:47940961-47940980 | None:intergenic | 20.0% |
!!! | ATGCTGTTTTGAAATTAATT+AGG | + | chr4_2:47941254-47941273 | Msa0603440:CDS | 20.0% |
!!! | TGCTGTTTTGAAATTAATTA+GGG | + | chr4_2:47941255-47941274 | Msa0603440:CDS | 20.0% |
!! | GTAGTATGTATAAAGATATT+GGG | - | chr4_2:47941289-47941308 | None:intergenic | 20.0% |
!! | AGTAGTATGTATAAAGATAT+TGG | - | chr4_2:47941290-47941309 | None:intergenic | 20.0% |
!! | TTAACCAAATAAAAATGTCA+CGG | - | chr4_2:47941821-47941840 | None:intergenic | 20.0% |
!! | TAAAACATATATCATGGTAT+TGG | - | chr4_2:47941980-47941999 | None:intergenic | 20.0% |
!!! | ATATATGTTTTACCAAGTAT+AGG | + | chr4_2:47941988-47942007 | Msa0603440:intron | 20.0% |
!!! | TGTGAGTTTTCTTTTTTAAA+AGG | + | chr4_2:47942016-47942035 | Msa0603440:intron | 20.0% |
!! | TTTAATTATAGGTTACTAGA+TGG | - | chr4_2:47942481-47942500 | None:intergenic | 20.0% |
!! | GTAACCTATAATTAAATATC+AGG | + | chr4_2:47942485-47942504 | Msa0603440:intron | 20.0% |
!! | ACATGTTTATAAATACGTTA+TGG | + | chr4_2:47943042-47943061 | Msa0603440:intron | 20.0% |
!! | CAAAAGAAAATGATAAAACA+TGG | - | chr4_2:47943382-47943401 | None:intergenic | 20.0% |
!!! | CATGTTTTATCATTTTCTTT+TGG | + | chr4_2:47943380-47943399 | Msa0603440:intron | 20.0% |
!!! | AATATTTAGGATATTTAGGA+TGG | - | chr4_2:47943449-47943468 | None:intergenic | 20.0% |
!! | ATACAGAAAAAACAGAATTA+TGG | + | chr4_2:47943780-47943799 | Msa0603440:intron | 20.0% |
!!! | TTCTAAACTTTTCTTGAATA+GGG | - | chr4_2:47944478-47944497 | None:intergenic | 20.0% |
!! | GATGAGATTTAAGAATTTAT+TGG | + | chr4_2:47945496-47945515 | Msa0603440:CDS | 20.0% |
! | TTACATTAACCAAATGCTTA+TGG | + | chr4_2:47939773-47939792 | Msa0603440:CDS | 25.0% |
! | AATGAATCATGAAACATACA+TGG | - | chr4_2:47939819-47939838 | None:intergenic | 25.0% |
! | ATGTATGTTTCATGATTCAT+TGG | + | chr4_2:47939818-47939837 | Msa0603440:CDS | 25.0% |
! | AAATCATTCTATGAAGTCAT+TGG | + | chr4_2:47939858-47939877 | Msa0603440:CDS | 25.0% |
! | AACAAAATCAACAGGAAAAT+GGG | - | chr4_2:47940018-47940037 | None:intergenic | 25.0% |
! | AAACAAAATCAACAGGAAAA+TGG | - | chr4_2:47940019-47940038 | None:intergenic | 25.0% |
!! | TTCTAAAAGAAGGAACAAAA+GGG | - | chr4_2:47940244-47940263 | None:intergenic | 25.0% |
!!! | TTTTGTTCCTTCTTTTAGAA+GGG | + | chr4_2:47940244-47940263 | Msa0603440:CDS | 25.0% |
! | AAAGAAGAAGCAAATAATTC+TGG | + | chr4_2:47940512-47940531 | Msa0603440:CDS | 25.0% |
! | AAAGAAAAATGAACTTCTTG+TGG | + | chr4_2:47941168-47941187 | Msa0603440:CDS | 25.0% |
! | TTTATACATACTACTGTCAA+TGG | + | chr4_2:47941295-47941314 | Msa0603440:CDS | 25.0% |
! | TTATACATACTACTGTCAAT+GGG | + | chr4_2:47941296-47941315 | Msa0603440:CDS | 25.0% |
!! | ATGAATATTATAGCTTGTGA+AGG | + | chr4_2:47941463-47941482 | Msa0603440:intron | 25.0% |
! | TTAATGAGATGTTTATCCAA+GGG | - | chr4_2:47941565-47941584 | None:intergenic | 25.0% |
! | ACTTGGTAAAACATATATCA+TGG | - | chr4_2:47941986-47942005 | None:intergenic | 25.0% |
!!! | TTTTTAAAAGGTGTTTGAGT+TGG | + | chr4_2:47942028-47942047 | Msa0603440:intron | 25.0% |
! | TTTAATTACATATGTCCGTT+TGG | - | chr4_2:47942136-47942155 | None:intergenic | 25.0% |
! | AAATATCAGGATTTATACCA+CGG | + | chr4_2:47942498-47942517 | Msa0603440:intron | 25.0% |
! | ATTACCTTAATTCTCAAAGA+TGG | + | chr4_2:47942799-47942818 | Msa0603440:intron | 25.0% |
! | TTACCTTAATTCTCAAAGAT+GGG | + | chr4_2:47942800-47942819 | Msa0603440:intron | 25.0% |
! | ACAAATGAAAATTGTAGTCT+TGG | - | chr4_2:47943297-47943316 | None:intergenic | 25.0% |
!! | AGAAAGCTATCATATTGATT+TGG | - | chr4_2:47943958-47943977 | None:intergenic | 25.0% |
! | AATCAATATGATAGCTTTCT+TGG | + | chr4_2:47943958-47943977 | Msa0603440:CDS | 25.0% |
! | TCAGAGTTATGAATATCTAA+GGG | - | chr4_2:47944225-47944244 | None:intergenic | 25.0% |
! | ATCAGAGTTATGAATATCTA+AGG | - | chr4_2:47944226-47944245 | None:intergenic | 25.0% |
! | TTAGATATTCATAACTCTGA+TGG | + | chr4_2:47944225-47944244 | Msa0603440:CDS | 25.0% |
!! | CTTCTAAACTTTTCTTGAAT+AGG | - | chr4_2:47944479-47944498 | None:intergenic | 25.0% |
! | TTCAAGAAAAGTTTAGAAGA+AGG | + | chr4_2:47944480-47944499 | Msa0603440:CDS | 25.0% |
! | ATTATCAGAGATGTTTGATA+AGG | + | chr4_2:47944704-47944723 | Msa0603440:CDS | 25.0% |
!! | GAATCATTTTCATTGCATAA+TGG | - | chr4_2:47944753-47944772 | None:intergenic | 25.0% |
! | AGAATGAAACAATAGATTTG+AGG | + | chr4_2:47944853-47944872 | Msa0603440:CDS | 25.0% |
!! | AAGTATGCAAACTTTTTGAA+AGG | - | chr4_2:47945137-47945156 | None:intergenic | 25.0% |
!!! | ATTGATTTTGGTATCCTATA+TGG | + | chr4_2:47945212-47945231 | Msa0603440:CDS | 25.0% |
!! | AAGTTTTTATCAGATAGAGA+AGG | + | chr4_2:47945257-47945276 | Msa0603440:CDS | 25.0% |
! | TTTGTTCAGTCAATTGTTAA+TGG | + | chr4_2:47945590-47945609 | Msa0603440:CDS | 25.0% |
!! | TTTTTGATGTAGACAACAAT+TGG | + | chr4_2:47945924-47945943 | Msa0603440:CDS | 25.0% |
GAGAAATCAATTTCATCCAA+AGG | - | chr4_2:47939738-47939757 | None:intergenic | 30.0% | |
! | AAATGGGTTTGCAATATAGA+AGG | - | chr4_2:47940002-47940021 | None:intergenic | 30.0% |
GCTTGAAAAACAAAATCAAC+AGG | - | chr4_2:47940026-47940045 | None:intergenic | 30.0% | |
TTTCAAGCTACTTCAATGAA+TGG | + | chr4_2:47940038-47940057 | Msa0603440:intron | 30.0% | |
TTACTAAGCAAGTTTGAATC+AGG | - | chr4_2:47940128-47940147 | None:intergenic | 30.0% | |
! | ATTTTCCAAATCAACAACCA+AGG | - | chr4_2:47940219-47940238 | None:intergenic | 30.0% |
! | CTTCTAAAAGAAGGAACAAA+AGG | - | chr4_2:47940245-47940264 | None:intergenic | 30.0% |
! | CTTTTGTTCCTTCTTTTAGA+AGG | + | chr4_2:47940243-47940262 | Msa0603440:CDS | 30.0% |
CAAATGCTAATGAGTTATTG+AGG | + | chr4_2:47940639-47940658 | Msa0603440:CDS | 30.0% | |
TCGCTAGATTCAAAATTGTA+TGG | - | chr4_2:47940877-47940896 | None:intergenic | 30.0% | |
! | TACAATTTTGAATCTAGCGA+AGG | + | chr4_2:47940877-47940896 | Msa0603440:CDS | 30.0% |
TAATGAGATGTTTATCCAAG+GGG | - | chr4_2:47941564-47941583 | None:intergenic | 30.0% | |
GTTAATGAGATGTTTATCCA+AGG | - | chr4_2:47941566-47941585 | None:intergenic | 30.0% | |
!! | GATTTTATGCTTGTTGAAGA+TGG | + | chr4_2:47941622-47941641 | Msa0603440:CDS | 30.0% |
! | TAGCAGAACTTTTCTTTTGT+TGG | + | chr4_2:47941893-47941912 | Msa0603440:intron | 30.0% |
! | AGCAGAACTTTTCTTTTGTT+GGG | + | chr4_2:47941894-47941913 | Msa0603440:intron | 30.0% |
!!! | TGAAATAGATTTTGGGTTGA+TGG | - | chr4_2:47942250-47942269 | None:intergenic | 30.0% |
ATCAACCCAAAATCTATTTC+AGG | + | chr4_2:47942249-47942268 | Msa0603440:intron | 30.0% | |
! | CTTCACCTGAAATAGATTTT+GGG | - | chr4_2:47942257-47942276 | None:intergenic | 30.0% |
AAGCTGTGCAATATATTGTT+TGG | + | chr4_2:47942321-47942340 | Msa0603440:intron | 30.0% | |
TTTGGTGAGACAATTATTGT+TGG | + | chr4_2:47942339-47942358 | Msa0603440:intron | 30.0% | |
!! | ACCATTTTTATGCTTCTGTA+CGG | + | chr4_2:47942406-47942425 | Msa0603440:intron | 30.0% |
CATAAAGAAGGAATGAAAGT+TGG | - | chr4_2:47942449-47942468 | None:intergenic | 30.0% | |
! | TGGAAGATTTTGCATAAAGA+AGG | - | chr4_2:47942461-47942480 | None:intergenic | 30.0% |
AGAGTCAAATATGTATCATG+CGG | - | chr4_2:47942536-47942555 | None:intergenic | 30.0% | |
! | TTTTTACACAAGACGTTTTC+AGG | - | chr4_2:47942872-47942891 | None:intergenic | 30.0% |
TGCGTACAATACATCAAATA+TGG | + | chr4_2:47942903-47942922 | Msa0603440:intron | 30.0% | |
GTACAATACATCAAATATGG+TGG | + | chr4_2:47942906-47942925 | Msa0603440:intron | 30.0% | |
TCTTCTTATCTCAAAGATGA+TGG | + | chr4_2:47943003-47943022 | Msa0603440:intron | 30.0% | |
TGTGTGCAAAACCATTTAAT+TGG | + | chr4_2:47943097-47943116 | Msa0603440:intron | 30.0% | |
TGCAAAACCATTTAATTGGT+CGG | + | chr4_2:47943101-47943120 | Msa0603440:intron | 30.0% | |
!!! | GTGTCATGGCTTTTATTTTA+TGG | - | chr4_2:47943237-47943256 | None:intergenic | 30.0% |
AGAAAATGATAAAACATGGG+TGG | - | chr4_2:47943378-47943397 | None:intergenic | 30.0% | |
AACAATAGTGATTTGAGTGT+TGG | + | chr4_2:47943742-47943761 | Msa0603440:intron | 30.0% | |
! | AGGAAGCTATCATATTGATT+TGG | - | chr4_2:47943892-47943911 | None:intergenic | 30.0% |
AGGAAGCTATCATATTCATT+TGG | - | chr4_2:47943925-47943944 | None:intergenic | 30.0% | |
CAGAGTTATGAATATCTAAG+GGG | - | chr4_2:47944224-47944243 | None:intergenic | 30.0% | |
ATTAACATGATCAGAAACAG+CGG | - | chr4_2:47944325-47944344 | None:intergenic | 30.0% | |
AATGAAGTTGAGAAATAGCA+GGG | - | chr4_2:47944368-47944387 | None:intergenic | 30.0% | |
ATTTCTCAACTTCATTCTAC+TGG | + | chr4_2:47944372-47944391 | Msa0603440:CDS | 30.0% | |
ACCAAAATCAATGATATGGA+GGG | - | chr4_2:47945204-47945223 | None:intergenic | 30.0% | |
TACCAAAATCAATGATATGG+AGG | - | chr4_2:47945205-47945224 | None:intergenic | 30.0% | |
GGATACCAAAATCAATGATA+TGG | - | chr4_2:47945208-47945227 | None:intergenic | 30.0% | |
! | TTTTTATCAGATAGAGAAGG+TGG | + | chr4_2:47945260-47945279 | Msa0603440:CDS | 30.0% |
TCTTAAAATCAAGAGCAATG+AGG | + | chr4_2:47945454-47945473 | Msa0603440:CDS | 30.0% | |
ATTGACTGAACAAAAATAGC+AGG | - | chr4_2:47945584-47945603 | None:intergenic | 30.0% | |
TCCATTGAATTCGGAATTAA+TGG | + | chr4_2:47945856-47945875 | Msa0603440:CDS | 30.0% | |
TCCATTAATTCCGAATTCAA+TGG | - | chr4_2:47945860-47945879 | None:intergenic | 30.0% | |
! | CGGAATTAATGGACAAATTT+AGG | + | chr4_2:47945867-47945886 | Msa0603440:CDS | 30.0% |
CATCAAAAACAAAGTCTTTG+TGG | - | chr4_2:47945913-47945932 | None:intergenic | 30.0% | |
! | TTTTATATGCTTCCACATGT+TGG | + | chr4_2:47945972-47945991 | Msa0603440:CDS | 30.0% |
TTTATATGCTTCCACATGTT+GGG | + | chr4_2:47945973-47945992 | Msa0603440:CDS | 30.0% | |
TCTTCTTCTGTAGCATTGTT+TGG | - | chr4_2:47939708-47939727 | None:intergenic | 35.0% | |
AGAAGAAGAAGATTCACCTT+TGG | + | chr4_2:47939719-47939738 | Msa0603440:CDS | 35.0% | |
GTTAATGTAACGAAGAACAG+TGG | - | chr4_2:47939763-47939782 | None:intergenic | 35.0% | |
TGTCTTCTTCCATAAGCATT+TGG | - | chr4_2:47939785-47939804 | None:intergenic | 35.0% | |
AATGCTTATGGAAGAAGACA+TGG | + | chr4_2:47939785-47939804 | Msa0603440:CDS | 35.0% | |
ATGCTTATGGAAGAAGACAT+GGG | + | chr4_2:47939786-47939805 | Msa0603440:CDS | 35.0% | |
CAGTAGTAGTAATTCTGTTG+AGG | + | chr4_2:47939935-47939954 | Msa0603440:intron | 35.0% | |
AGTAATAGCAGTAGCGATTT+CGG | + | chr4_2:47940071-47940090 | Msa0603440:CDS | 35.0% | |
TCTTCCTAAAGTGAATTCCT+TGG | + | chr4_2:47940199-47940218 | Msa0603440:CDS | 35.0% | |
ACAACCAAGGAATTCACTTT+AGG | - | chr4_2:47940206-47940225 | None:intergenic | 35.0% | |
! | GAATTCCTTGGTTGTTGATT+TGG | + | chr4_2:47940211-47940230 | Msa0603440:CDS | 35.0% |
AGAAAGGAAGAAAAGGCTAA+TGG | + | chr4_2:47940467-47940486 | Msa0603440:CDS | 35.0% | |
GAAAGGAAGAAAAGGCTAAT+GGG | + | chr4_2:47940468-47940487 | Msa0603440:CDS | 35.0% | |
GAAGAAGCAAATAATTCTGG+TGG | + | chr4_2:47940515-47940534 | Msa0603440:CDS | 35.0% | |
TAAGAAACAAGGCAACAAGA+AGG | + | chr4_2:47940553-47940572 | Msa0603440:CDS | 35.0% | |
AAGAAACAAGGCAACAAGAA+GGG | + | chr4_2:47940554-47940573 | Msa0603440:CDS | 35.0% | |
ATGAGTTATTGAGGCAGATA+AGG | + | chr4_2:47940648-47940667 | Msa0603440:CDS | 35.0% | |
GACAGGCTTCAATATACATT+TGG | - | chr4_2:47940823-47940842 | None:intergenic | 35.0% | |
ATGAATGCAAGCTTCTTGAA+TGG | - | chr4_2:47940845-47940864 | None:intergenic | 35.0% | |
! | ACTCTCCACATTGTAGATTT+TGG | + | chr4_2:47940908-47940927 | Msa0603440:CDS | 35.0% |
GATAAACGATAAATAAGGGC+AGG | - | chr4_2:47940956-47940975 | None:intergenic | 35.0% | |
TATCGTTTATCAAAACGACC+TGG | + | chr4_2:47940965-47940984 | Msa0603440:CDS | 35.0% | |
ATCGTTTATCAAAACGACCT+GGG | + | chr4_2:47940966-47940985 | Msa0603440:CDS | 35.0% | |
! | GCAATAGCATTGAACTCAAA+TGG | - | chr4_2:47941109-47941128 | None:intergenic | 35.0% |
TCAATGCTATTGCACAGAAA+TGG | + | chr4_2:47941116-47941135 | Msa0603440:CDS | 35.0% | |
CAATGCTATTGCACAGAAAT+GGG | + | chr4_2:47941117-47941136 | Msa0603440:CDS | 35.0% | |
TTGTGGTGAATTCTGTTTGT+CGG | + | chr4_2:47941185-47941204 | Msa0603440:CDS | 35.0% | |
AATTTCAAAACAGCATCCCT+GGG | - | chr4_2:47941250-47941269 | None:intergenic | 35.0% | |
TAATTTCAAAACAGCATCCC+TGG | - | chr4_2:47941251-47941270 | None:intergenic | 35.0% | |
TGATGTTTGAGAAAGAGTTC+TGG | + | chr4_2:47941428-47941447 | Msa0603440:intron | 35.0% | |
GATGTTTGAGAAAGAGTTCT+GGG | + | chr4_2:47941429-47941448 | Msa0603440:intron | 35.0% | |
ATGTTTGAGAAAGAGTTCTG+GGG | + | chr4_2:47941430-47941449 | Msa0603440:intron | 35.0% | |
AATGGAAGGTTCGGAATATA+AGG | + | chr4_2:47941521-47941540 | Msa0603440:CDS | 35.0% | |
ATGGAAGGTTCGGAATATAA+GGG | + | chr4_2:47941522-47941541 | Msa0603440:CDS | 35.0% | |
! | AGGAGGAAGCGTAAATTATT+CGG | - | chr4_2:47941675-47941694 | None:intergenic | 35.0% |
ATTGTTCTATACCATTCCGT+TGG | - | chr4_2:47941785-47941804 | None:intergenic | 35.0% | |
! | GTAGCCGTGACATTTTTATT+TGG | + | chr4_2:47941814-47941833 | Msa0603440:intron | 35.0% |
AGAATCGTGAGTAGCATTTA+GGG | + | chr4_2:47941939-47941958 | Msa0603440:intron | 35.0% | |
ACTCACATTTGACCTATACT+TGG | - | chr4_2:47942003-47942022 | None:intergenic | 35.0% | |
! | GCTTCACCTGAAATAGATTT+TGG | - | chr4_2:47942258-47942277 | None:intergenic | 35.0% |
!! | CACTTCTGAAGCACAAAAAA+GGG | - | chr4_2:47942373-47942392 | None:intergenic | 35.0% |
!! | ACACTTCTGAAGCACAAAAA+AGG | - | chr4_2:47942374-47942393 | None:intergenic | 35.0% |
! | ACCGTACAGAAGCATAAAAA+TGG | - | chr4_2:47942410-47942429 | None:intergenic | 35.0% |
! | TTTTTATGCTTCTGTACGGT+TGG | + | chr4_2:47942410-47942429 | Msa0603440:intron | 35.0% |
!! | GAATGAAAGTTGGTGAATAG+AGG | - | chr4_2:47942439-47942458 | None:intergenic | 35.0% |
GAGTCAAATATGTATCATGC+GGG | - | chr4_2:47942535-47942554 | None:intergenic | 35.0% | |
TTAAACAAGTCGTGGGATAT+GGG | - | chr4_2:47942692-47942711 | None:intergenic | 35.0% | |
GTAAAGTTGTTGTCATGAGA+CGG | + | chr4_2:47942838-47942857 | Msa0603440:intron | 35.0% | |
GCAAAACCATTTAATTGGTC+GGG | + | chr4_2:47943102-47943121 | Msa0603440:intron | 35.0% | |
CAAAACCATTTAATTGGTCG+GGG | + | chr4_2:47943103-47943122 | Msa0603440:intron | 35.0% | |
! | CTTTTCTCACTCTTTGACAA+CGG | + | chr4_2:47943169-47943188 | Msa0603440:intron | 35.0% |
GAACGTAAAAAGTTTGAGCT+TGG | + | chr4_2:47943194-47943213 | Msa0603440:intron | 35.0% | |
! | ACAAACAATGTAGAGTGTCA+TGG | - | chr4_2:47943251-47943270 | None:intergenic | 35.0% |
! | TGAAAATTGTAGTCTTGGTC+AGG | - | chr4_2:47943292-47943311 | None:intergenic | 35.0% |
CCACTTTGACTAAAGAACAT+AGG | - | chr4_2:47943504-47943523 | None:intergenic | 35.0% | |
CCTATGTTCTTTAGTCAAAG+TGG | + | chr4_2:47943501-47943520 | Msa0603440:intron | 35.0% | |
CAACATAAAGATGCTCACTT+AGG | - | chr4_2:47943563-47943582 | None:intergenic | 35.0% | |
TGTTGCTAGATTCAAGAGAA+GGG | - | chr4_2:47943607-47943626 | None:intergenic | 35.0% | |
TTGTTGCTAGATTCAAGAGA+AGG | - | chr4_2:47943608-47943627 | None:intergenic | 35.0% | |
CTTGAATCTAGCAACAATTC+AGG | + | chr4_2:47943611-47943630 | Msa0603440:intron | 35.0% | |
CACTCAAATCACTATTGTTG+AGG | - | chr4_2:47943741-47943760 | None:intergenic | 35.0% | |
! | TTTGTGAAATCACTAGCTTG+AGG | - | chr4_2:47943817-47943836 | None:intergenic | 35.0% |
CAAGCTAGTGATTTCACAAA+CGG | + | chr4_2:47943817-47943836 | Msa0603440:intron | 35.0% | |
ATTCATTTGGATCAGCATCA+AGG | - | chr4_2:47943912-47943931 | None:intergenic | 35.0% | |
TGAATATGATAGCTTCCTTG+AGG | + | chr4_2:47943927-47943946 | Msa0603440:intron | 35.0% | |
CATATAACCTTCTATAGGGA+AGG | - | chr4_2:47944013-47944032 | None:intergenic | 35.0% | |
CTTCCCTATAGAAGGTTATA+TGG | + | chr4_2:47944011-47944030 | Msa0603440:CDS | 35.0% | |
AGGCCATATAACCTTCTATA+GGG | - | chr4_2:47944017-47944036 | None:intergenic | 35.0% | |
TATAGAAGGTTATATGGCCT+CGG | + | chr4_2:47944017-47944036 | Msa0603440:CDS | 35.0% | |
TGAAAAATCAGTGTCTTCGA+GGG | - | chr4_2:47944055-47944074 | None:intergenic | 35.0% | |
!!! | GACACTGATTTTTCAGATAC+TGG | + | chr4_2:47944060-47944079 | Msa0603440:CDS | 35.0% |
GTTCATAAACCAAATCCTGA+TGG | + | chr4_2:47944086-47944105 | Msa0603440:CDS | 35.0% | |
! | CATTTTCTTCCATCAGGATT+TGG | - | chr4_2:47944098-47944117 | None:intergenic | 35.0% |
! | GATCAACATTTTCTTCCATC+AGG | - | chr4_2:47944104-47944123 | None:intergenic | 35.0% |
CAGTCATTTGTAAGCTAAGT+GGG | - | chr4_2:47944143-47944162 | None:intergenic | 35.0% | |
TCAGTCATTTGTAAGCTAAG+TGG | - | chr4_2:47944144-47944163 | None:intergenic | 35.0% | |
!! | ATATCTAAGGGGTGTTGATT+AGG | - | chr4_2:47944213-47944232 | None:intergenic | 35.0% |
ATGAAGTTGAGAAATAGCAG+GGG | - | chr4_2:47944367-47944386 | None:intergenic | 35.0% | |
GAATGAAGTTGAGAAATAGC+AGG | - | chr4_2:47944369-47944388 | None:intergenic | 35.0% | |
GGATTCTTCTATTACACAGA+TGG | + | chr4_2:47944419-47944438 | Msa0603440:CDS | 35.0% | |
!!! | TGGTTTTGAATCATCCACTT+TGG | + | chr4_2:47944539-47944558 | Msa0603440:CDS | 35.0% |
TGAATCATCCACTTTGGATA+TGG | + | chr4_2:47944545-47944564 | Msa0603440:CDS | 35.0% | |
ATCCACTTTGGATATGGTTA+GGG | + | chr4_2:47944551-47944570 | Msa0603440:CDS | 35.0% | |
TTTCTACCCTTCAACACAAA+CGG | - | chr4_2:47944588-47944607 | None:intergenic | 35.0% | |
AAGAACAAGAAGAAGAAGCT+TGG | + | chr4_2:47944637-47944656 | Msa0603440:CDS | 35.0% | |
! | TGATAAGGTTTTGCTTGATG+TGG | + | chr4_2:47944719-47944738 | Msa0603440:CDS | 35.0% |
! | GATAAGGTTTTGCTTGATGT+GGG | + | chr4_2:47944720-47944739 | Msa0603440:CDS | 35.0% |
GAAAATGATTCCTTGCAGAA+TGG | + | chr4_2:47944762-47944781 | Msa0603440:CDS | 35.0% | |
ATTAGCATTCCTGTTGTCAT+TGG | - | chr4_2:47944913-47944932 | None:intergenic | 35.0% | |
!!! | ACCCTCCATATCATTGATTT+TGG | + | chr4_2:47945200-47945219 | Msa0603440:CDS | 35.0% |
! | GTATCCTATATGGTTTTCAG+TGG | + | chr4_2:47945222-47945241 | Msa0603440:CDS | 35.0% |
GTTTCTTCGATTCTTTCCAT+TGG | - | chr4_2:47945338-47945357 | None:intergenic | 35.0% | |
ATGGAAAGAATCGAAGAAAC+TGG | + | chr4_2:47945338-47945357 | Msa0603440:CDS | 35.0% | |
CATTAAACTCAAAGGGAACA+TGG | - | chr4_2:47945394-47945413 | None:intergenic | 35.0% | |
GGTATGGCATTAAACTCAAA+GGG | - | chr4_2:47945401-47945420 | None:intergenic | 35.0% | |
TGGTATGGCATTAAACTCAA+AGG | - | chr4_2:47945402-47945421 | None:intergenic | 35.0% | |
ATTCTTTGCTACACGGTTTA+GGG | + | chr4_2:47945628-47945647 | Msa0603440:CDS | 35.0% | |
AAACAAATACAGGATGCTGA+TGG | + | chr4_2:47945709-47945728 | Msa0603440:CDS | 35.0% | |
CAAACAGCTTCCATTGAATT+CGG | + | chr4_2:47945847-47945866 | Msa0603440:CDS | 35.0% | |
TTGGAGCTGGTTGAAGAAAA+GGG | - | chr4_2:47939689-47939708 | None:intergenic | 40.0% | |
! | TTTGGAGCTGGTTGAAGAAA+AGG | - | chr4_2:47939690-47939709 | None:intergenic | 40.0% |
AGTCTGTGTTGCAATTTGAG+AGG | + | chr4_2:47940153-47940172 | Msa0603440:CDS | 40.0% | |
GTCTGTGTTGCAATTTGAGA+GGG | + | chr4_2:47940154-47940173 | Msa0603440:CDS | 40.0% | |
TCTGTGTTGCAATTTGAGAG+GGG | + | chr4_2:47940155-47940174 | Msa0603440:CDS | 40.0% | |
!! | TGTTCCTTCTTTTAGAAGGG+AGG | + | chr4_2:47940247-47940266 | Msa0603440:CDS | 40.0% |
! | TGAACCTCCCTTCTAAAAGA+AGG | - | chr4_2:47940254-47940273 | None:intergenic | 40.0% |
!! | TTCTTTTAGAAGGGAGGTTC+AGG | + | chr4_2:47940253-47940272 | Msa0603440:intron | 40.0% |
!! | AACATTTTTCAGCTGAGTCG+AGG | + | chr4_2:47940309-47940328 | Msa0603440:CDS | 40.0% |
!! | ACATTTTTCAGCTGAGTCGA+GGG | + | chr4_2:47940310-47940329 | Msa0603440:CDS | 40.0% |
! | TGATGATGACAGTGAGCTAT+CGG | + | chr4_2:47940409-47940428 | Msa0603440:intron | 40.0% |
GAAGCAAATAATTCTGGTGG+TGG | + | chr4_2:47940518-47940537 | Msa0603440:CDS | 40.0% | |
AAAAGCCGTGGTAAGAAACA+AGG | + | chr4_2:47940542-47940561 | Msa0603440:CDS | 40.0% | |
!! | TGTTGCCTTGTTTCTTACCA+CGG | - | chr4_2:47940550-47940569 | None:intergenic | 40.0% |
AAGGCAATATTCTTCTCCAC+TGG | + | chr4_2:47940667-47940686 | Msa0603440:CDS | 40.0% | |
AGGCAATATTCTTCTCCACT+GGG | + | chr4_2:47940668-47940687 | Msa0603440:CDS | 40.0% | |
GGATGCCAAAATCTACAATG+TGG | - | chr4_2:47940916-47940935 | None:intergenic | 40.0% | |
!! | GTAGATTTTGGCATCCGTTA+CGG | + | chr4_2:47940920-47940939 | Msa0603440:CDS | 40.0% |
TCGTTTATCAAAACGACCTG+GGG | + | chr4_2:47940967-47940986 | Msa0603440:CDS | 40.0% | |
AACGTTCACAATACCTTGCT+AGG | - | chr4_2:47941078-47941097 | None:intergenic | 40.0% | |
ATGGGAAACCATCAAAGTTG+AGG | + | chr4_2:47941135-47941154 | Msa0603440:CDS | 40.0% | |
CTTCAAGTCCTCAACTTTGA+TGG | - | chr4_2:47941146-47941165 | None:intergenic | 40.0% | |
AGTTGTGTTGAATAGTCCCA+GGG | + | chr4_2:47941231-47941250 | Msa0603440:CDS | 40.0% | |
! | TGTTTGAGAAAGAGTTCTGG+GGG | + | chr4_2:47941431-47941450 | Msa0603440:intron | 40.0% |
TTCCATTTCCTGTATGTCTC+TGG | - | chr4_2:47941508-47941527 | None:intergenic | 40.0% | |
AGAGACATACAGGAAATGGA+AGG | + | chr4_2:47941507-47941526 | Msa0603440:CDS | 40.0% | |
CATACAGGAAATGGAAGGTT+CGG | + | chr4_2:47941512-47941531 | Msa0603440:CDS | 40.0% | |
TAATTTACGCTTCCTCCTGT+TGG | + | chr4_2:47941677-47941696 | Msa0603440:CDS | 40.0% | |
AATTTACGCTTCCTCCTGTT+GGG | + | chr4_2:47941678-47941697 | Msa0603440:CDS | 40.0% | |
!! | CTTCTAGAATATGTCACGCA+TGG | - | chr4_2:47941752-47941771 | None:intergenic | 40.0% |
CAGAATCGTGAGTAGCATTT+AGG | + | chr4_2:47941938-47941957 | Msa0603440:intron | 40.0% | |
TGTTAGTGTCCAACACCAAA+CGG | + | chr4_2:47942118-47942137 | Msa0603440:intron | 40.0% | |
!! | TACATATGTCCGTTTGGTGT+TGG | - | chr4_2:47942130-47942149 | None:intergenic | 40.0% |
ACATTGACACCAGAAACACA+CGG | - | chr4_2:47942209-47942228 | None:intergenic | 40.0% | |
!!! | CCAGTGTTTCTAGCTTTTCA+CGG | + | chr4_2:47942277-47942296 | Msa0603440:intron | 40.0% |
TAAACAAGTCGTGGGATATG+GGG | - | chr4_2:47942691-47942710 | None:intergenic | 40.0% | |
CTTAAACAAGTCGTGGGATA+TGG | - | chr4_2:47942693-47942712 | None:intergenic | 40.0% | |
AGACAGCTTAAACAAGTCGT+GGG | - | chr4_2:47942699-47942718 | None:intergenic | 40.0% | |
! | GCTCCCATCTTTGAGAATTA+AGG | - | chr4_2:47942806-47942825 | None:intergenic | 40.0% |
ACAACTTTACCGTTGTGTCA+AGG | - | chr4_2:47942828-47942847 | None:intergenic | 40.0% | |
AGATACCCCGACCAATTAAA+TGG | - | chr4_2:47943111-47943130 | None:intergenic | 40.0% | |
AGAAGGGTTGGATTGAAGTT+TGG | - | chr4_2:47943591-47943610 | None:intergenic | 40.0% | |
! | TCACTAGCTTGAGGAAAGTT+TGG | - | chr4_2:47943808-47943827 | None:intergenic | 40.0% |
ACAAACGGTTACTACCACTT+TGG | + | chr4_2:47943832-47943851 | Msa0603440:intron | 40.0% | |
TACTACCACTTTGGTGAAGA+AGG | + | chr4_2:47943841-47943860 | Msa0603440:intron | 40.0% | |
ACTACCACTTTGGTGAAGAA+GGG | + | chr4_2:47943842-47943861 | Msa0603440:intron | 40.0% | |
!! | ATTGATTTGGATCAGCCTCA+AGG | - | chr4_2:47943945-47943964 | None:intergenic | 40.0% |
GAGGCCATATAACCTTCTAT+AGG | - | chr4_2:47944018-47944037 | None:intergenic | 40.0% | |
CTGAAAAATCAGTGTCTTCG+AGG | - | chr4_2:47944056-47944075 | None:intergenic | 40.0% | |
AAGCTAAGTGGGTCATAGAA+CGG | - | chr4_2:47944132-47944151 | None:intergenic | 40.0% | |
! | CATTCTACTGGTGTTAGTGA+TGG | + | chr4_2:47944384-47944403 | Msa0603440:CDS | 40.0% |
!! | TAGTGATGGACTCAGAGATT+TGG | + | chr4_2:47944398-47944417 | Msa0603440:CDS | 40.0% |
TCAAAACCAGTCAAGAGTTG+AGG | - | chr4_2:47944528-47944547 | None:intergenic | 40.0% | |
CATCCACTTTGGATATGGTT+AGG | + | chr4_2:47944550-47944569 | Msa0603440:CDS | 40.0% | |
AGAGAATCCGTTTGTGTTGA+AGG | + | chr4_2:47944578-47944597 | Msa0603440:CDS | 40.0% | |
GAGAATCCGTTTGTGTTGAA+GGG | + | chr4_2:47944579-47944598 | Msa0603440:CDS | 40.0% | |
! | AGCTATTAGTGCTATTGACG+AGG | + | chr4_2:47944677-47944696 | Msa0603440:CDS | 40.0% |
TTTCACTTGTCCATTCTGCA+AGG | - | chr4_2:47944775-47944794 | None:intergenic | 40.0% | |
GCAGAATGGACAAGTGAAAA+CGG | + | chr4_2:47944776-47944795 | Msa0603440:CDS | 40.0% | |
AAGACTCGTCGTAAGAAACA+AGG | + | chr4_2:47944825-47944844 | Msa0603440:CDS | 40.0% | |
CTGTATATGCCAATGACAAC+AGG | + | chr4_2:47944901-47944920 | Msa0603440:CDS | 40.0% | |
ATGAGCTACTGAAGCAGATT+AGG | + | chr4_2:47944931-47944950 | Msa0603440:CDS | 40.0% | |
TTGGCTCATTACTTTGCCAA+TGG | + | chr4_2:47944990-47945009 | Msa0603440:CDS | 40.0% | |
TTGGCCACTGAAAACCATAT+AGG | - | chr4_2:47945229-47945248 | None:intergenic | 40.0% | |
TTGGACGAAAACCAGGTAAA+GGG | - | chr4_2:47945319-47945338 | None:intergenic | 40.0% | |
ATTGGACGAAAACCAGGTAA+AGG | - | chr4_2:47945320-47945339 | None:intergenic | 40.0% | |
!! | TTTACCTGGTTTTCGTCCAA+TGG | + | chr4_2:47945319-47945338 | Msa0603440:CDS | 40.0% |
ATTGTTTCCCAATAACGCGA+TGG | - | chr4_2:47945422-47945441 | None:intergenic | 40.0% | |
!! | TTGGGAAACAATTCGAGTTG+AGG | + | chr4_2:47945430-47945449 | Msa0603440:CDS | 40.0% |
AGCAAACAGTCCTAGAAATG+CGG | + | chr4_2:47945532-47945551 | Msa0603440:CDS | 40.0% | |
AAATGCAGAACCGCATTTCT+AGG | - | chr4_2:47945545-47945564 | None:intergenic | 40.0% | |
ATTCGCCATTCTTTGCTACA+CGG | + | chr4_2:47945621-47945640 | Msa0603440:CDS | 40.0% | |
CTAAACCGTGTAGCAAAGAA+TGG | - | chr4_2:47945629-47945648 | None:intergenic | 40.0% | |
CATTCTTTGCTACACGGTTT+AGG | + | chr4_2:47945627-47945646 | Msa0603440:CDS | 40.0% | |
TACCACGCGAAAACAAATAC+AGG | + | chr4_2:47945699-47945718 | Msa0603440:CDS | 40.0% | |
!! | ATCCTGTATTTGTTTTCGCG+TGG | - | chr4_2:47945704-47945723 | None:intergenic | 40.0% |
! | ATGAACGTTGTAGCTTGTGA+AGG | + | chr4_2:47945758-47945777 | Msa0603440:CDS | 40.0% |
AAGGTTTAGAGAGAGTTGAG+AGG | + | chr4_2:47945777-47945796 | Msa0603440:CDS | 40.0% | |
TGCCACTGTTTATATGTCTC+GGG | - | chr4_2:47945803-47945822 | None:intergenic | 40.0% | |
CTGCCACTGTTTATATGTCT+CGG | - | chr4_2:47945804-47945823 | None:intergenic | 40.0% | |
CATATAAACAGTGGCAGGTT+AGG | + | chr4_2:47945807-47945826 | Msa0603440:CDS | 40.0% | |
GTGGTAACATTGCTGTAACT+TGG | - | chr4_2:47945894-47945913 | None:intergenic | 40.0% | |
GACAACAATTGGATGCTTCA+AGG | + | chr4_2:47945935-47945954 | Msa0603440:CDS | 40.0% | |
ACAATTGGATGCTTCAAGGT+TGG | + | chr4_2:47945939-47945958 | Msa0603440:CDS | 40.0% | |
! | TCTGTAGCATTGTTTGGAGC+TGG | - | chr4_2:47939702-47939721 | None:intergenic | 45.0% |
! | CAGGGCTTTGTACAGAAGAA+GGG | - | chr4_2:47939893-47939912 | None:intergenic | 45.0% |
! | TCAGGGCTTTGTACAGAAGA+AGG | - | chr4_2:47939894-47939913 | None:intergenic | 45.0% |
! | AGTAGCGATTTCGGTGTAAC+CGG | + | chr4_2:47940080-47940099 | Msa0603440:CDS | 45.0% |
!! | TGTAACCGGTGGTGGATTTA+AGG | + | chr4_2:47940094-47940113 | Msa0603440:CDS | 45.0% |
TCCATCCTTAAATCCACCAC+CGG | - | chr4_2:47940102-47940121 | None:intergenic | 45.0% | |
!! | TTTTAGAAGGGAGGTTCAGG+AGG | + | chr4_2:47940256-47940275 | Msa0603440:intron | 45.0% |
!! | CATTTTTCAGCTGAGTCGAG+GGG | + | chr4_2:47940311-47940330 | Msa0603440:CDS | 45.0% |
!! | ATTTTTCAGCTGAGTCGAGG+GGG | + | chr4_2:47940312-47940331 | Msa0603440:CDS | 45.0% |
GCTATCGGAGCTGTTTGATA+AGG | + | chr4_2:47940424-47940443 | Msa0603440:intron | 45.0% | |
!! | CTGTTTGATAAGGTGCTGCT+TGG | + | chr4_2:47940434-47940453 | Msa0603440:intron | 45.0% |
!! | TGATAAGGTGCTGCTTGGAA+CGG | + | chr4_2:47940439-47940458 | Msa0603440:intron | 45.0% |
! | GGAAGAAAAGGCTAATGGGT+CGG | + | chr4_2:47940472-47940491 | Msa0603440:CDS | 45.0% |
TGTGGATCTGAGGACAATGT+TGG | + | chr4_2:47940580-47940599 | Msa0603440:CDS | 45.0% | |
TATTCTTCTCCACTGGGTGA+TGG | + | chr4_2:47940674-47940693 | Msa0603440:CDS | 45.0% | |
TTGGTACGCTTTCACCATGT+CGG | - | chr4_2:47940804-47940823 | None:intergenic | 45.0% | |
TGCAAGCTTCTTGAATGGAC+AGG | - | chr4_2:47940840-47940859 | None:intergenic | 45.0% | |
CGTTTATCAAAACGACCTGG+GGG | + | chr4_2:47940968-47940987 | Msa0603440:CDS | 45.0% | |
CAGTTGTGTTGAATAGTCCC+AGG | + | chr4_2:47941230-47941249 | Msa0603440:CDS | 45.0% | |
TGAACCGTGTCGCAAAGAAT+GGG | - | chr4_2:47941333-47941352 | None:intergenic | 45.0% | |
TTGAACCGTGTCGCAAAGAA+TGG | - | chr4_2:47941334-47941353 | None:intergenic | 45.0% | |
ATTCTTTGCGACACGGTTCA+AGG | + | chr4_2:47941333-47941352 | Msa0603440:CDS | 45.0% | |
TTGCTCGTGAAGATCAAACG+AGG | + | chr4_2:47941404-47941423 | Msa0603440:intron | 45.0% | |
! | TAGCTTGTGAAGGTTCTCAG+AGG | + | chr4_2:47941473-47941492 | Msa0603440:intron | 45.0% |
AGCTTGTGAAGGTTCTCAGA+GGG | + | chr4_2:47941474-47941493 | Msa0603440:intron | 45.0% | |
AAGGTTCGGAATATAAGGGC+TGG | + | chr4_2:47941526-47941545 | Msa0603440:CDS | 45.0% | |
TGGATTTAAGCAACTCCCCT+TGG | + | chr4_2:47941546-47941565 | Msa0603440:CDS | 45.0% | |
ATCATTGCCAAGTCCTATGC+AGG | - | chr4_2:47941706-47941725 | None:intergenic | 45.0% | |
ACTTGGCAATGATCTGCTCA+AGG | + | chr4_2:47941713-47941732 | Msa0603440:intron | 45.0% | |
TCTGCTCAAGGAATCTGCAT+AGG | + | chr4_2:47941725-47941744 | Msa0603440:intron | 45.0% | |
TCTATACCATTCCGTTGGCA+GGG | - | chr4_2:47941780-47941799 | None:intergenic | 45.0% | |
TTCTATACCATTCCGTTGGC+AGG | - | chr4_2:47941781-47941800 | None:intergenic | 45.0% | |
! | ACACCTTCGATCAGAAGTGT+TGG | - | chr4_2:47942081-47942100 | None:intergenic | 45.0% |
! | CTTCTGATCGAAGGTGTATC+CGG | + | chr4_2:47942084-47942103 | Msa0603440:intron | 45.0% |
CATTGACACCAGAAACACAC+GGG | - | chr4_2:47942208-47942227 | None:intergenic | 45.0% | |
CCGTGAAAAGCTAGAAACAC+TGG | - | chr4_2:47942280-47942299 | None:intergenic | 45.0% | |
AAACAAGTCGTGGGATATGG+GGG | - | chr4_2:47942690-47942709 | None:intergenic | 45.0% | |
CAGACAGCTTAAACAAGTCG+TGG | - | chr4_2:47942700-47942719 | None:intergenic | 45.0% | |
! | TATGCGAGAGCTTTGGTGTA+CGG | + | chr4_2:47942950-47942969 | Msa0603440:intron | 45.0% |
GCTAGATTCAAGAGAAGGGT+TGG | - | chr4_2:47943603-47943622 | None:intergenic | 45.0% | |
TACTCCCTTCTTCACCAAAG+TGG | - | chr4_2:47943849-47943868 | None:intergenic | 45.0% | |
!! | TTTCTTGGTGCTGATCCACT+TGG | + | chr4_2:47943973-47943992 | Msa0603440:CDS | 45.0% |
ACCTTCTATAGGGAAGGTAG+TGG | - | chr4_2:47944007-47944026 | None:intergenic | 45.0% | |
AAATCAGTGTCTTCGAGGGA+AGG | - | chr4_2:47944051-47944070 | None:intergenic | 45.0% | |
! | ATTGCTATTGCTGTTGCTGC+TGG | - | chr4_2:47944256-47944275 | None:intergenic | 45.0% |
AACAGCGGTATCAGGTGAAA+GGG | - | chr4_2:47944310-47944329 | None:intergenic | 45.0% | |
AAACAGCGGTATCAGGTGAA+AGG | - | chr4_2:47944311-47944330 | None:intergenic | 45.0% | |
TGATCAGAAACAGCGGTATC+AGG | - | chr4_2:47944318-47944337 | None:intergenic | 45.0% | |
CTCCCTAACCATATCCAAAG+TGG | - | chr4_2:47944556-47944575 | None:intergenic | 45.0% | |
CACTTTGGATATGGTTAGGG+AGG | + | chr4_2:47944554-47944573 | Msa0603440:CDS | 45.0% | |
GAATGGACAAGTGAAAACGG+AGG | + | chr4_2:47944779-47944798 | Msa0603440:CDS | 45.0% | |
AGTCACCTCCATCAAATGGA+GGG | + | chr4_2:47944802-47944821 | Msa0603440:CDS | 45.0% | |
AAGTAATGAGCCAACCTCTG+TGG | - | chr4_2:47944984-47945003 | None:intergenic | 45.0% | |
! | TTACTTTGCCAATGGCCTTG+AGG | + | chr4_2:47944998-47945017 | Msa0603440:CDS | 45.0% |
!! | GTAGAGATCCTCTTGGTGTT+CGG | - | chr4_2:47945071-47945090 | None:intergenic | 45.0% |
AGGTAAAGGGAACTCTATCC+CGG | - | chr4_2:47945306-47945325 | None:intergenic | 45.0% | |
CTTTCCATTGGACGAAAACC+AGG | - | chr4_2:47945326-47945345 | None:intergenic | 45.0% | |
!! | ATGGAAGCGCTTGCAATAGT+CGG | - | chr4_2:47945375-47945394 | None:intergenic | 45.0% |
ATGCCATACCATCGCGTTAT+TGG | + | chr4_2:47945411-47945430 | Msa0603440:CDS | 45.0% | |
TGCCATACCATCGCGTTATT+GGG | + | chr4_2:47945412-47945431 | Msa0603440:CDS | 45.0% | |
TTCCCAATAACGCGATGGTA+TGG | - | chr4_2:47945417-47945436 | None:intergenic | 45.0% | |
AATACAGGATGCTGATGGAG+AGG | + | chr4_2:47945714-47945733 | Msa0603440:CDS | 45.0% | |
ATACAGGATGCTGATGGAGA+GGG | + | chr4_2:47945715-47945734 | Msa0603440:CDS | 45.0% | |
! | CTGATGGAGAGGGAAAGTAT+CGG | + | chr4_2:47945725-47945744 | Msa0603440:CDS | 45.0% |
CGAGACATATAAACAGTGGC+AGG | + | chr4_2:47945802-47945821 | Msa0603440:CDS | 45.0% | |
CAGGTTAGGAATACAAGAGC+TGG | + | chr4_2:47945821-47945840 | Msa0603440:CDS | 45.0% | |
TGGATGCTTCAAGGTTGGAA+AGG | + | chr4_2:47945944-47945963 | Msa0603440:CDS | 45.0% | |
!! | ACCGGTGGTGGATTTAAGGA+TGG | + | chr4_2:47940098-47940117 | Msa0603440:CDS | 50.0% |
! | TTCAGGAGGTAGTGGTTGAG+AGG | + | chr4_2:47940270-47940289 | Msa0603440:intron | 50.0% |
! | TCAGGAGGTAGTGGTTGAGA+GGG | + | chr4_2:47940271-47940290 | Msa0603440:intron | 50.0% |
!! | GATAAGGTGCTGCTTGGAAC+GGG | + | chr4_2:47940440-47940459 | Msa0603440:intron | 50.0% |
!! | ATAAGGTGCTGCTTGGAACG+GGG | + | chr4_2:47940441-47940460 | Msa0603440:intron | 50.0% |
GGGGTGCAGAAAGGAAGAAA+AGG | + | chr4_2:47940460-47940479 | Msa0603440:CDS | 50.0% | |
!! | AGGCAACAAGAAGGGTGTTG+TGG | + | chr4_2:47940562-47940581 | Msa0603440:CDS | 50.0% |
!! | AGAAGGGTGTTGTGGATCTG+AGG | + | chr4_2:47940570-47940589 | Msa0603440:CDS | 50.0% |
GAATGCTCTTGAAGCACGCA+TGG | + | chr4_2:47940724-47940743 | Msa0603440:CDS | 50.0% | |
! | GTCGGCAGCAGAGTTTCTTT+TGG | - | chr4_2:47940786-47940805 | None:intergenic | 50.0% |
AAGAAACTCTGCTGCCGACA+TGG | + | chr4_2:47940787-47940806 | Msa0603440:CDS | 50.0% | |
GCATCCGTTACGGCTTTCAA+TGG | + | chr4_2:47940930-47940949 | Msa0603440:CDS | 50.0% | |
CAGGCCATTGAAAGCCGTAA+CGG | - | chr4_2:47940937-47940956 | None:intergenic | 50.0% | |
CTCCTAAGCTGCTCTTGACA+GGG | + | chr4_2:47940993-47941012 | Msa0603440:CDS | 50.0% | |
ATCCCTGTCAAGAGCAGCTT+AGG | - | chr4_2:47940998-47941017 | None:intergenic | 50.0% | |
ATGCCCCATTCTTTGCGACA+CGG | + | chr4_2:47941326-47941345 | Msa0603440:CDS | 50.0% | |
GAACCGTGTCGCAAAGAATG+GGG | - | chr4_2:47941332-47941351 | None:intergenic | 50.0% | |
!! | TTGAGAAAGAGTTCTGGGGG+AGG | + | chr4_2:47941434-47941453 | Msa0603440:intron | 50.0% |
!! | TGAGAAAGAGTTCTGGGGGA+GGG | + | chr4_2:47941435-47941454 | Msa0603440:intron | 50.0% |
GGCCAGAGACATACAGGAAA+TGG | + | chr4_2:47941503-47941522 | Msa0603440:CDS | 50.0% | |
GATGGAAACTGCATGCTGCA+AGG | + | chr4_2:47941640-47941659 | Msa0603440:CDS | 50.0% | |
GAAACTGCATGCTGCAAGGA+TGG | + | chr4_2:47941644-47941663 | Msa0603440:CDS | 50.0% | |
TGCATGCTGCAAGGATGGAA+GGG | + | chr4_2:47941649-47941668 | Msa0603440:CDS | 50.0% | |
TTGGGTACCTGCATAGGACT+TGG | + | chr4_2:47941696-47941715 | Msa0603440:intron | 50.0% | |
CTATACCATTCCGTTGGCAG+GGG | - | chr4_2:47941779-47941798 | None:intergenic | 50.0% | |
!! | CCTTCGATCAGAAGTGTTGG+CGG | - | chr4_2:47942078-47942097 | None:intergenic | 50.0% |
CACTAACACGTGTCGAACAC+CGG | - | chr4_2:47942106-47942125 | None:intergenic | 50.0% | |
TGTTAGTGCCCGTGTGTTTC+TGG | + | chr4_2:47942197-47942216 | Msa0603440:intron | 50.0% | |
! | TGCGGGTAATCTAAAGTCCG+TGG | - | chr4_2:47942518-47942537 | None:intergenic | 50.0% |
AGATGGGAGCCTTGACACAA+CGG | + | chr4_2:47942816-47942835 | Msa0603440:intron | 50.0% | |
! | AATATGGTGGAACCCCTTCC+TGG | + | chr4_2:47942919-47942938 | Msa0603440:intron | 50.0% |
CATACGCAAGATCCAGGAAG+GGG | - | chr4_2:47942934-47942953 | None:intergenic | 50.0% | |
GCATACGCAAGATCCAGGAA+GGG | - | chr4_2:47942935-47942954 | None:intergenic | 50.0% | |
TCTTGCGTATGCGAGAGCTT+TGG | + | chr4_2:47942943-47942962 | Msa0603440:intron | 50.0% | |
! | ATGCGAGAGCTTTGGTGTAC+GGG | + | chr4_2:47942951-47942970 | Msa0603440:intron | 50.0% |
! | TTGGTAACAGTGCCAGCATG+AGG | + | chr4_2:47943399-47943418 | Msa0603440:intron | 50.0% |
! | TGGTGAAGAAGGGAGTACAG+TGG | + | chr4_2:47943852-47943871 | Msa0603440:intron | 50.0% |
GCCACTACCTTCCCTATAGA+AGG | + | chr4_2:47944003-47944022 | Msa0603440:CDS | 50.0% | |
!! | GGGTGTTGATTAGGAGAACG+AGG | - | chr4_2:47944204-47944223 | None:intergenic | 50.0% |
CAATAGCAATAGCAGCGTCG+AGG | + | chr4_2:47944266-47944285 | Msa0603440:CDS | 50.0% | |
ACAGCGGTATCAGGTGAAAG+GGG | - | chr4_2:47944309-47944328 | None:intergenic | 50.0% | |
GAGGAGTCACCTCCATCAAA+TGG | + | chr4_2:47944798-47944817 | Msa0603440:CDS | 50.0% | |
GAGTCACCTCCATCAAATGG+AGG | + | chr4_2:47944801-47944820 | Msa0603440:CDS | 50.0% | |
GTCTTCCCTCCATTTGATGG+AGG | - | chr4_2:47944810-47944829 | None:intergenic | 50.0% | |
CGAGTCTTCCCTCCATTTGA+TGG | - | chr4_2:47944813-47944832 | None:intergenic | 50.0% | |
AGGCAACATTCTTCACCCTC+TGG | + | chr4_2:47944951-47944970 | Msa0603440:CDS | 50.0% | |
GGCAACATTCTTCACCCTCT+GGG | + | chr4_2:47944952-47944971 | Msa0603440:CDS | 50.0% | |
GCAACATTCTTCACCCTCTG+GGG | + | chr4_2:47944953-47944972 | Msa0603440:CDS | 50.0% | |
!! | TCTTGGTGTTCGGAGAGGAA+TGG | - | chr4_2:47945061-47945080 | None:intergenic | 50.0% |
ATTCCTCTCCGAACACCAAG+AGG | + | chr4_2:47945060-47945079 | Msa0603440:CDS | 50.0% | |
CTCAGCAGTAGAGATCCTCT+TGG | - | chr4_2:47945078-47945097 | None:intergenic | 50.0% | |
CCTCCAAACCTGAAGATCAC+CGG | + | chr4_2:47945284-47945303 | Msa0603440:CDS | 50.0% | |
CTCCAAACCTGAAGATCACC+GGG | + | chr4_2:47945285-47945304 | Msa0603440:CDS | 50.0% | |
! | ATCCCGGTGATCTTCAGGTT+TGG | - | chr4_2:47945290-47945309 | None:intergenic | 50.0% |
ACTCTATCCCGGTGATCTTC+AGG | - | chr4_2:47945295-47945314 | None:intergenic | 50.0% | |
GGGATAGAGTTCCCTTTACC+TGG | + | chr4_2:47945305-47945324 | Msa0603440:CDS | 50.0% | |
CTTTGCTACACGGTTTAGGG+AGG | + | chr4_2:47945631-47945650 | Msa0603440:CDS | 50.0% | |
GGCCCGAGACATATAAACAG+TGG | + | chr4_2:47945798-47945817 | Msa0603440:CDS | 50.0% | |
TTATGCTGGCACCCAACATG+TGG | - | chr4_2:47945987-47946006 | None:intergenic | 50.0% | |
! | AGCGATTTCGGTGTAACCGG+TGG | + | chr4_2:47940083-47940102 | Msa0603440:CDS | 55.0% |
! | GATTTCGGTGTAACCGGTGG+TGG | + | chr4_2:47940086-47940105 | Msa0603440:CDS | 55.0% |
!! | GCAATTTGAGAGGGGTGTCG+AGG | + | chr4_2:47940163-47940182 | Msa0603440:CDS | 55.0% |
AAGGGAGGTTCAGGAGGTAG+TGG | + | chr4_2:47940262-47940281 | Msa0603440:intron | 55.0% | |
!! | TCTGGTGGTGGAAAAAGCCG+TGG | + | chr4_2:47940530-47940549 | Msa0603440:CDS | 55.0% |
!! | CTCTGAGATCCATCACCCAG+TGG | - | chr4_2:47940686-47940705 | None:intergenic | 55.0% |
!! | CACTGGGTGATGGATCTCAG+AGG | + | chr4_2:47940684-47940703 | Msa0603440:CDS | 55.0% |
CTCTTGAAGCACGCATGGCT+GGG | + | chr4_2:47940729-47940748 | Msa0603440:CDS | 55.0% | |
CCTGTCAAGAGCAGCTTAGG+AGG | - | chr4_2:47940995-47941014 | None:intergenic | 55.0% | |
CCTCCTAAGCTGCTCTTGAC+AGG | + | chr4_2:47940992-47941011 | Msa0603440:CDS | 55.0% | |
CTTTGCGACACGGTTCAAGG+AGG | + | chr4_2:47941336-47941355 | Msa0603440:CDS | 55.0% | |
AAGGTTCTCAGAGGGTCGAG+AGG | + | chr4_2:47941482-47941501 | Msa0603440:intron | 55.0% | |
TCGAGAGGCCAGAGACATAC+AGG | + | chr4_2:47941497-47941516 | Msa0603440:CDS | 55.0% | |
CTGCATGCTGCAAGGATGGA+AGG | + | chr4_2:47941648-47941667 | Msa0603440:CDS | 55.0% | |
CTATGCAGGTACCCAACAGG+AGG | - | chr4_2:47941692-47941711 | None:intergenic | 55.0% | |
CTCCTGTTGGGTACCTGCAT+AGG | + | chr4_2:47941690-47941709 | Msa0603440:intron | 55.0% | |
GTCCTATGCAGGTACCCAAC+AGG | - | chr4_2:47941695-47941714 | None:intergenic | 55.0% | |
TAGAAGCTGACCCCTGCCAA+CGG | + | chr4_2:47941766-47941785 | Msa0603440:intron | 55.0% | |
!! | CAGAAGTGTTGGCGGTGCAA+TGG | - | chr4_2:47942070-47942089 | None:intergenic | 55.0% |
CCGCCAACACTTCTGATCGA+AGG | + | chr4_2:47942075-47942094 | Msa0603440:intron | 55.0% | |
CGCATACGCAAGATCCAGGA+AGG | - | chr4_2:47942936-47942955 | None:intergenic | 55.0% | |
CTCTCGCATACGCAAGATCC+AGG | - | chr4_2:47942940-47942959 | None:intergenic | 55.0% | |
CCTACGAAGAAGCCTCATGC+TGG | - | chr4_2:47943414-47943433 | None:intergenic | 55.0% | |
CCAGCATGAGGCTTCTTCGT+AGG | + | chr4_2:47943411-47943430 | Msa0603440:intron | 55.0% | |
GTAGTGGCTGCAAAGCCAAG+TGG | - | chr4_2:47943991-47944010 | None:intergenic | 55.0% | |
AGGTTATATGGCCTCGGCGA+CGG | + | chr4_2:47944023-47944042 | Msa0603440:CDS | 55.0% | |
CCAGTCAAGAGTTGAGGCTG+CGG | - | chr4_2:47944522-47944541 | None:intergenic | 55.0% | |
! | CATTCTTCACCCTCTGGGGA+TGG | + | chr4_2:47944957-47944976 | Msa0603440:CDS | 55.0% |
!! | GATCCTCTTGGTGTTCGGAG+AGG | - | chr4_2:47945066-47945085 | None:intergenic | 55.0% |
! | CCGGTGATCTTCAGGTTTGG+AGG | - | chr4_2:47945287-47945306 | None:intergenic | 55.0% |
TTTCAGCTGAGTCGAGGGGG+AGG | + | chr4_2:47940315-47940334 | Msa0603440:CDS | 60.0% | |
GGGGGAGGAAGAATCACGAG+CGG | + | chr4_2:47940330-47940349 | Msa0603440:CDS | 60.0% | |
GGGGAGGAAGAATCACGAGC+GGG | + | chr4_2:47940331-47940350 | Msa0603440:CDS | 60.0% | |
GGGAGGAAGAATCACGAGCG+GGG | + | chr4_2:47940332-47940351 | Msa0603440:CDS | 60.0% | |
GCTTGGAACGGGGTGCAGAA+AGG | + | chr4_2:47940451-47940470 | Msa0603440:CDS | 60.0% | |
!! | GGGTGATGGATCTCAGAGGC+TGG | + | chr4_2:47940688-47940707 | Msa0603440:CDS | 60.0% |
GCTCTTGAAGCACGCATGGC+TGG | + | chr4_2:47940728-47940747 | Msa0603440:CDS | 60.0% | |
GGGATAGAACTCCCCCAACC+TGG | + | chr4_2:47941013-47941032 | Msa0603440:CDS | 60.0% | |
AACTCCCCCAACCTGGCTTC+AGG | + | chr4_2:47941020-47941039 | Msa0603440:CDS | 60.0% | |
CCCTGTCTCCTGGACTCTCT+CGG | - | chr4_2:47941050-47941069 | None:intergenic | 60.0% | |
CCGAGAGAGTCCAGGAGACA+GGG | + | chr4_2:47941047-47941066 | Msa0603440:CDS | 60.0% | |
AGACAGGGCTTCGCCTAGCA+AGG | + | chr4_2:47941062-47941081 | Msa0603440:CDS | 60.0% | |
GTCAAGAGTTGAGGCTGCGG+AGG | - | chr4_2:47944519-47944538 | None:intergenic | 60.0% | |
CCGCAGCCTCAACTCTTGAC+TGG | + | chr4_2:47944519-47944538 | Msa0603440:CDS | 60.0% | |
CTCTGTGGTCCATCCCCAGA+GGG | - | chr4_2:47944969-47944988 | None:intergenic | 60.0% | |
TGGGGATGGACCACAGAGGT+TGG | + | chr4_2:47944971-47944990 | Msa0603440:CDS | 60.0% | |
AAGGCGTGCCTCAAGGCCAT+TGG | - | chr4_2:47945009-47945028 | None:intergenic | 60.0% | |
CTCCAGTACCATCGCCGACA+AGG | - | chr4_2:47945028-47945047 | None:intergenic | 60.0% | |
GAAGCACGCATGGCTGGGAC+TGG | + | chr4_2:47940734-47940753 | Msa0603440:CDS | 65.0% | |
AGCAGCTTAGGAGGTCCCCC+AGG | - | chr4_2:47940986-47941005 | None:intergenic | 65.0% | |
! | CAGGCCTGAAGCCAGGTTGG+GGG | - | chr4_2:47941027-47941046 | None:intergenic | 65.0% |
GCAGGCCTGAAGCCAGGTTG+GGG | - | chr4_2:47941028-47941047 | None:intergenic | 65.0% | |
GGCAGGCCTGAAGCCAGGTT+GGG | - | chr4_2:47941029-47941048 | None:intergenic | 65.0% | |
GTCTCCTGGACTCTCTCGGC+AGG | - | chr4_2:47941046-47941065 | None:intergenic | 65.0% | |
GCCGAGAGAGTCCAGGAGAC+AGG | + | chr4_2:47941046-47941065 | Msa0603440:CDS | 65.0% | |
CTAGGCGAAGCCCTGTCTCC+TGG | - | chr4_2:47941060-47941079 | None:intergenic | 65.0% | |
GCTGACCCCTGCCAACGGAA+TGG | + | chr4_2:47941771-47941790 | Msa0603440:intron | 65.0% | |
CCTCTGTGGTCCATCCCCAG+AGG | - | chr4_2:47944970-47944989 | None:intergenic | 65.0% | |
! | CCTCTGGGGATGGACCACAG+AGG | + | chr4_2:47944967-47944986 | Msa0603440:CDS | 65.0% |
GGCCTTGAGGCACGCCTTGT+CGG | + | chr4_2:47945011-47945030 | Msa0603440:CDS | 65.0% | |
CGCCTTGTCGGCGATGGTAC+TGG | + | chr4_2:47945023-47945042 | Msa0603440:CDS | 65.0% | |
CGGCAGGCCTGAAGCCAGGT+TGG | - | chr4_2:47941030-47941049 | None:intergenic | 70.0% | |
CTCTCGGCAGGCCTGAAGCC+AGG | - | chr4_2:47941034-47941053 | None:intergenic | 70.0% | |
CAGGCCTGCCGAGAGAGTCC+AGG | + | chr4_2:47941039-47941058 | Msa0603440:CDS | 70.0% | |
GAGGGAAGGATCCGTCGCCG+AGG | - | chr4_2:47944037-47944056 | None:intergenic | 70.0% | |
CGCCGACAAGGCGTGCCTCA+AGG | - | chr4_2:47945016-47945035 | None:intergenic | 70.0% | |
GAGGCACGCCTTGTCGGCGA+TGG | + | chr4_2:47945017-47945036 | Msa0603440:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 47939678 | 47946006 | 47939678 | ID=Msa0603440;Name=Msa0603440 |
chr4_2 | mRNA | 47939678 | 47946006 | 47939678 | ID=Msa0603440-mRNA-1;Parent=Msa0603440;Name=Msa0603440-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|0|0|6|0|1275 |
chr4_2 | exon | 47939678 | 47939918 | 47939678 | ID=Msa0603440-mRNA-1:exon:10998;Parent=Msa0603440-mRNA-1 |
chr4_2 | exon | 47940045 | 47940268 | 47940045 | ID=Msa0603440-mRNA-1:exon:10999;Parent=Msa0603440-mRNA-1 |
chr4_2 | exon | 47940275 | 47940400 | 47940275 | ID=Msa0603440-mRNA-1:exon:11000;Parent=Msa0603440-mRNA-1 |
chr4_2 | exon | 47940446 | 47941409 | 47940446 | ID=Msa0603440-mRNA-1:exon:11001;Parent=Msa0603440-mRNA-1 |
chr4_2 | exon | 47941485 | 47941699 | 47941485 | ID=Msa0603440-mRNA-1:exon:11002;Parent=Msa0603440-mRNA-1 |
chr4_2 | exon | 47943949 | 47946006 | 47943949 | ID=Msa0603440-mRNA-1:exon:11003;Parent=Msa0603440-mRNA-1 |
chr4_2 | CDS | 47939678 | 47939918 | 47939678 | ID=Msa0603440-mRNA-1:cds;Parent=Msa0603440-mRNA-1 |
chr4_2 | CDS | 47940045 | 47940268 | 47940045 | ID=Msa0603440-mRNA-1:cds;Parent=Msa0603440-mRNA-1 |
chr4_2 | CDS | 47940275 | 47940400 | 47940275 | ID=Msa0603440-mRNA-1:cds;Parent=Msa0603440-mRNA-1 |
chr4_2 | CDS | 47940446 | 47941409 | 47940446 | ID=Msa0603440-mRNA-1:cds;Parent=Msa0603440-mRNA-1 |
chr4_2 | CDS | 47941485 | 47941699 | 47941485 | ID=Msa0603440-mRNA-1:cds;Parent=Msa0603440-mRNA-1 |
chr4_2 | CDS | 47943949 | 47946006 | 47943949 | ID=Msa0603440-mRNA-1:cds;Parent=Msa0603440-mRNA-1 |
Gene Sequence |
Protein sequence |