Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0684300 | XP_039689840.1 | 95.441 | 658 | 30 | 0 | 1 | 658 | 67 | 724 | 0.0 | 1272 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0684300 | sp|Q9XE58|SCL14_ARATH | 47.286 | 700 | 289 | 17 | 19 | 658 | 88 | 767 | 0.0 | 578 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0684300 | G7JUT6 | 95.441 | 658 | 30 | 0 | 1 | 658 | 78 | 735 | 0.0 | 1271 |
Gene ID | Type | Classification |
---|---|---|
Msa0684300 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0603440 | Msa0684300 | 0.871305 | 7.562784e-67 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0684300 | MtrunA17_Chr4g0031711 | 95.441 | 658 | 30 | 0 | 1 | 658 | 78 | 735 | 0.0 | 1271 |
Msa0684300 | MtrunA17_Chr4g0031701 | 71.927 | 659 | 135 | 7 | 1 | 658 | 19 | 628 | 0.0 | 923 |
Msa0684300 | MtrunA17_Chr4g0031731 | 71.624 | 659 | 137 | 8 | 1 | 658 | 19 | 628 | 0.0 | 909 |
Msa0684300 | MtrunA17_Chr4g0031721 | 49.280 | 694 | 282 | 13 | 4 | 658 | 24 | 686 | 0.0 | 612 |
Msa0684300 | MtrunA17_Chr7g0238891 | 45.152 | 691 | 329 | 17 | 6 | 658 | 64 | 742 | 0.0 | 547 |
Msa0684300 | MtrunA17_Chr4g0031741 | 52.539 | 512 | 217 | 10 | 162 | 658 | 152 | 652 | 4.79e-175 | 513 |
Msa0684300 | MtrunA17_Chr2g0328431 | 44.745 | 666 | 298 | 17 | 9 | 658 | 45 | 656 | 1.12e-174 | 512 |
Msa0684300 | MtrunA17_Chr2g0328411 | 44.745 | 666 | 294 | 19 | 9 | 656 | 45 | 654 | 1.32e-174 | 513 |
Msa0684300 | MtrunA17_Chr2g0328341 | 48.326 | 478 | 230 | 7 | 183 | 658 | 178 | 640 | 5.80e-159 | 471 |
Msa0684300 | MtrunA17_Chr2g0328401 | 42.743 | 627 | 303 | 14 | 19 | 636 | 56 | 635 | 2.37e-154 | 460 |
Msa0684300 | MtrunA17_Chr2g0328381 | 47.817 | 458 | 220 | 8 | 206 | 658 | 200 | 643 | 4.70e-150 | 449 |
Msa0684300 | MtrunA17_Chr2g0328361 | 48.402 | 438 | 187 | 8 | 222 | 658 | 218 | 617 | 1.02e-138 | 419 |
Msa0684300 | MtrunA17_Chr2g0328371 | 52.157 | 255 | 116 | 3 | 358 | 611 | 2 | 251 | 6.73e-93 | 287 |
Msa0684300 | MtrunA17_Chr2g0319091 | 32.979 | 376 | 247 | 4 | 280 | 655 | 208 | 578 | 1.65e-68 | 234 |
Msa0684300 | MtrunA17_Chr5g0447691 | 32.181 | 376 | 250 | 3 | 280 | 655 | 173 | 543 | 8.89e-64 | 220 |
Msa0684300 | MtrunA17_Chr3g0101141 | 32.804 | 378 | 245 | 6 | 280 | 655 | 171 | 541 | 2.46e-61 | 214 |
Msa0684300 | MtrunA17_Chr2g0290241 | 29.894 | 378 | 259 | 4 | 279 | 655 | 52 | 424 | 1.42e-60 | 208 |
Msa0684300 | MtrunA17_Chr4g0076091 | 30.829 | 386 | 247 | 8 | 279 | 656 | 170 | 543 | 1.17e-57 | 204 |
Msa0684300 | MtrunA17_Chr5g0445331 | 31.865 | 386 | 242 | 9 | 280 | 655 | 157 | 531 | 2.70e-57 | 202 |
Msa0684300 | MtrunA17_Chr8g0357601 | 30.500 | 400 | 242 | 7 | 276 | 658 | 174 | 554 | 4.64e-54 | 194 |
Msa0684300 | MtrunA17_Chr7g0224271 | 30.923 | 401 | 240 | 7 | 274 | 655 | 290 | 672 | 5.90e-54 | 196 |
Msa0684300 | MtrunA17_Chr3g0125811 | 28.877 | 374 | 261 | 3 | 282 | 655 | 201 | 569 | 7.38e-54 | 194 |
Msa0684300 | MtrunA17_Chr1g0159461 | 28.877 | 374 | 261 | 3 | 282 | 655 | 223 | 591 | 8.16e-54 | 194 |
Msa0684300 | MtrunA17_Chr4g0057891 | 29.412 | 408 | 257 | 8 | 263 | 655 | 128 | 519 | 2.15e-53 | 191 |
Msa0684300 | MtrunA17_Chr3g0110971 | 30.435 | 414 | 251 | 8 | 259 | 655 | 193 | 586 | 2.64e-50 | 184 |
Msa0684300 | MtrunA17_Chr2g0306641 | 30.412 | 388 | 248 | 6 | 274 | 655 | 115 | 486 | 6.23e-50 | 181 |
Msa0684300 | MtrunA17_Chr7g0245601 | 30.270 | 370 | 240 | 7 | 288 | 657 | 442 | 793 | 4.36e-47 | 178 |
Msa0684300 | MtrunA17_Chr8g0376381 | 31.266 | 387 | 227 | 10 | 279 | 655 | 164 | 521 | 4.49e-47 | 174 |
Msa0684300 | MtrunA17_Chr4g0038851 | 27.293 | 458 | 261 | 9 | 260 | 655 | 21 | 468 | 4.76e-46 | 170 |
Msa0684300 | MtrunA17_Chr4g0038761 | 27.763 | 371 | 254 | 4 | 288 | 658 | 88 | 444 | 1.27e-43 | 162 |
Msa0684300 | MtrunA17_Chr2g0294461 | 29.873 | 395 | 254 | 9 | 274 | 655 | 200 | 584 | 1.49e-43 | 165 |
Msa0684300 | MtrunA17_Chr5g0396491 | 27.356 | 435 | 246 | 10 | 281 | 655 | 53 | 477 | 1.62e-41 | 157 |
Msa0684300 | MtrunA17_Chr3g0085681 | 26.603 | 421 | 248 | 8 | 285 | 655 | 26 | 435 | 5.45e-41 | 155 |
Msa0684300 | MtrunA17_Chr4g0057291 | 26.804 | 388 | 262 | 10 | 280 | 657 | 288 | 663 | 1.08e-39 | 155 |
Msa0684300 | MtrunA17_Chr2g0294471 | 27.990 | 393 | 261 | 9 | 274 | 655 | 194 | 575 | 3.67e-36 | 143 |
Msa0684300 | MtrunA17_Chr1g0183641 | 27.763 | 389 | 245 | 14 | 276 | 655 | 115 | 476 | 3.75e-36 | 142 |
Msa0684300 | MtrunA17_Chr1g0200401 | 30.250 | 400 | 236 | 14 | 281 | 655 | 77 | 458 | 4.38e-35 | 138 |
Msa0684300 | MtrunA17_Chr3g0114841 | 26.733 | 404 | 264 | 10 | 273 | 656 | 109 | 500 | 1.49e-33 | 135 |
Msa0684300 | MtrunA17_Chr5g0401131 | 25.916 | 382 | 273 | 5 | 283 | 657 | 113 | 491 | 1.22e-32 | 132 |
Msa0684300 | MtrunA17_Chr4g0039661 | 27.198 | 364 | 239 | 9 | 300 | 655 | 209 | 554 | 2.74e-32 | 132 |
Msa0684300 | MtrunA17_Chr5g0401421 | 23.709 | 426 | 268 | 11 | 281 | 658 | 32 | 448 | 8.11e-31 | 125 |
Msa0684300 | MtrunA17_Chr7g0270031 | 28.205 | 390 | 257 | 12 | 274 | 655 | 179 | 553 | 1.22e-30 | 127 |
Msa0684300 | MtrunA17_Chr5g0424131 | 28.499 | 393 | 246 | 12 | 285 | 656 | 121 | 499 | 1.38e-30 | 126 |
Msa0684300 | MtrunA17_Chr4g0053901 | 24.582 | 419 | 271 | 9 | 281 | 658 | 56 | 470 | 2.73e-30 | 124 |
Msa0684300 | MtrunA17_Chr7g0236851 | 25.069 | 363 | 251 | 7 | 300 | 656 | 310 | 657 | 3.75e-30 | 126 |
Msa0684300 | MtrunA17_Chr6g0468561 | 26.289 | 388 | 253 | 12 | 282 | 655 | 293 | 661 | 1.08e-29 | 124 |
Msa0684300 | MtrunA17_Chr1g0194621 | 26.434 | 401 | 257 | 13 | 274 | 655 | 136 | 517 | 8.81e-29 | 120 |
Msa0684300 | MtrunA17_Chr8g0383981 | 26.895 | 409 | 246 | 17 | 269 | 658 | 124 | 498 | 3.10e-28 | 119 |
Msa0684300 | MtrunA17_Chr3g0085361 | 25.352 | 355 | 207 | 7 | 350 | 655 | 4 | 349 | 1.20e-27 | 114 |
Msa0684300 | MtrunA17_Chr2g0329591 | 25.667 | 300 | 213 | 4 | 284 | 582 | 74 | 364 | 8.39e-22 | 99.0 |
Msa0684300 | MtrunA17_Chr2g0328391 | 58.228 | 79 | 27 | 3 | 6 | 79 | 57 | 134 | 9.95e-17 | 84.3 |
Msa0684300 | MtrunA17_Chr7g0230731 | 23.077 | 403 | 275 | 8 | 261 | 655 | 352 | 727 | 9.55e-16 | 81.3 |
Msa0684300 | MtrunA17_Chr7g0230771 | 22.475 | 396 | 286 | 7 | 261 | 655 | 355 | 730 | 2.36e-15 | 79.7 |
Msa0684300 | MtrunA17_Chr4g0012071 | 24.000 | 375 | 260 | 9 | 285 | 655 | 197 | 550 | 1.19e-14 | 77.4 |
Msa0684300 | MtrunA17_Chr8g0344101 | 24.352 | 386 | 233 | 14 | 284 | 642 | 223 | 576 | 2.34e-14 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0684300 | AT1G07530.1 | 47.286 | 700 | 289 | 17 | 19 | 658 | 88 | 767 | 0.0 | 578 |
Msa0684300 | AT2G29060.2 | 47.793 | 657 | 280 | 15 | 11 | 657 | 53 | 656 | 0.0 | 562 |
Msa0684300 | AT2G29060.1 | 47.605 | 668 | 302 | 14 | 11 | 657 | 53 | 693 | 0.0 | 558 |
Msa0684300 | AT2G29065.1 | 45.776 | 651 | 283 | 15 | 19 | 658 | 39 | 630 | 0.0 | 535 |
Msa0684300 | AT1G07520.2 | 51.136 | 528 | 240 | 8 | 137 | 658 | 16 | 531 | 3.35e-180 | 522 |
Msa0684300 | AT1G07520.4 | 51.136 | 528 | 240 | 8 | 137 | 658 | 16 | 531 | 3.35e-180 | 522 |
Msa0684300 | AT1G07520.1 | 46.037 | 656 | 307 | 12 | 19 | 658 | 71 | 695 | 8.20e-180 | 527 |
Msa0684300 | AT1G07520.3 | 46.037 | 656 | 307 | 12 | 19 | 658 | 72 | 696 | 9.33e-180 | 527 |
Msa0684300 | AT2G37650.2 | 43.215 | 678 | 326 | 18 | 6 | 657 | 58 | 702 | 7.29e-169 | 499 |
Msa0684300 | AT2G37650.1 | 43.215 | 678 | 326 | 18 | 6 | 657 | 70 | 714 | 1.21e-168 | 499 |
Msa0684300 | AT3G46600.3 | 50.111 | 451 | 208 | 5 | 208 | 658 | 116 | 549 | 1.02e-153 | 455 |
Msa0684300 | AT3G46600.1 | 50.111 | 451 | 208 | 5 | 208 | 658 | 148 | 581 | 1.48e-153 | 456 |
Msa0684300 | AT5G59450.1 | 47.314 | 484 | 236 | 7 | 183 | 658 | 128 | 600 | 3.34e-150 | 448 |
Msa0684300 | AT3G46600.2 | 52.910 | 378 | 173 | 2 | 281 | 658 | 1 | 373 | 1.54e-142 | 420 |
Msa0684300 | AT2G04890.1 | 32.181 | 376 | 243 | 4 | 280 | 655 | 49 | 412 | 3.98e-61 | 210 |
Msa0684300 | AT1G50600.3 | 32.181 | 376 | 250 | 3 | 280 | 655 | 155 | 525 | 1.44e-60 | 211 |
Msa0684300 | AT1G50600.1 | 32.181 | 376 | 250 | 3 | 280 | 655 | 226 | 596 | 6.43e-60 | 211 |
Msa0684300 | AT1G50600.2 | 32.181 | 376 | 250 | 3 | 280 | 655 | 230 | 600 | 6.86e-60 | 211 |
Msa0684300 | AT5G48150.1 | 30.585 | 376 | 257 | 3 | 280 | 655 | 118 | 489 | 3.74e-58 | 204 |
Msa0684300 | AT5G48150.4 | 30.585 | 376 | 257 | 3 | 280 | 655 | 118 | 489 | 3.74e-58 | 204 |
Msa0684300 | AT5G48150.2 | 30.585 | 376 | 257 | 3 | 280 | 655 | 118 | 489 | 3.74e-58 | 204 |
Msa0684300 | AT5G48150.3 | 30.585 | 376 | 257 | 3 | 280 | 655 | 118 | 489 | 3.74e-58 | 204 |
Msa0684300 | AT1G21450.1 | 30.585 | 376 | 253 | 5 | 282 | 655 | 223 | 592 | 2.37e-55 | 199 |
Msa0684300 | AT4G17230.1 | 30.918 | 414 | 276 | 5 | 248 | 657 | 119 | 526 | 2.15e-53 | 192 |
Msa0684300 | AT4G17230.2 | 30.918 | 414 | 276 | 5 | 248 | 657 | 119 | 526 | 2.15e-53 | 192 |
Msa0684300 | AT1G66350.1 | 31.496 | 381 | 232 | 10 | 279 | 655 | 150 | 505 | 6.37e-49 | 179 |
Msa0684300 | AT1G50420.1 | 25.694 | 432 | 257 | 5 | 281 | 655 | 54 | 478 | 2.75e-47 | 174 |
Msa0684300 | AT3G54220.1 | 30.280 | 393 | 257 | 8 | 266 | 657 | 275 | 651 | 3.39e-47 | 177 |
Msa0684300 | AT2G01570.1 | 30.208 | 384 | 239 | 10 | 279 | 655 | 219 | 580 | 5.66e-47 | 175 |
Msa0684300 | AT1G14920.1 | 30.366 | 382 | 241 | 9 | 279 | 655 | 167 | 528 | 8.41e-47 | 174 |
Msa0684300 | AT3G03450.1 | 28.982 | 383 | 250 | 9 | 279 | 655 | 178 | 544 | 1.07e-46 | 174 |
Msa0684300 | AT5G17490.1 | 26.190 | 420 | 280 | 10 | 243 | 655 | 119 | 515 | 7.52e-43 | 162 |
Msa0684300 | AT5G41920.1 | 28.346 | 381 | 252 | 6 | 278 | 655 | 37 | 399 | 5.25e-42 | 157 |
Msa0684300 | AT5G66770.1 | 26.914 | 405 | 278 | 8 | 256 | 655 | 192 | 583 | 2.45e-37 | 147 |
Msa0684300 | AT5G52510.1 | 26.410 | 390 | 255 | 10 | 282 | 655 | 266 | 639 | 1.14e-36 | 146 |
Msa0684300 | AT1G63100.1 | 31.231 | 333 | 215 | 8 | 280 | 609 | 248 | 569 | 1.43e-36 | 145 |
Msa0684300 | AT1G63100.2 | 31.231 | 333 | 215 | 8 | 280 | 609 | 273 | 594 | 1.68e-36 | 145 |
Msa0684300 | AT4G37650.1 | 25.445 | 393 | 268 | 10 | 283 | 657 | 145 | 530 | 2.26e-34 | 138 |
Msa0684300 | AT3G50650.1 | 29.102 | 323 | 210 | 5 | 293 | 609 | 184 | 493 | 1.49e-33 | 135 |
Msa0684300 | AT3G49950.1 | 26.854 | 391 | 264 | 10 | 281 | 657 | 27 | 409 | 1.66e-30 | 124 |
Msa0684300 | AT1G55580.1 | 25.060 | 419 | 255 | 11 | 281 | 655 | 41 | 444 | 3.65e-26 | 112 |
Msa0684300 | AT4G08250.1 | 26.633 | 398 | 262 | 14 | 274 | 656 | 95 | 477 | 1.52e-25 | 111 |
Msa0684300 | AT3G13840.1 | 23.256 | 430 | 254 | 16 | 254 | 655 | 128 | 509 | 7.57e-15 | 78.2 |
Msa0684300 | AT4G00150.1 | 24.403 | 377 | 246 | 12 | 286 | 655 | 209 | 553 | 2.83e-11 | 67.0 |
Find 144 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGAATTAATGGACAAATTT+AGG | 0.087513 | 4_4:+47608457 | Msa0684300:CDS |
GATGAGATTTAAGAATTTAT+TGG | 0.142030 | 4_4:+47608086 | Msa0684300:CDS |
ACCCTCCATATCATTGATTT+TGG | 0.161875 | 4_4:+47607790 | Msa0684300:CDS |
TCCATTGAATTCGGAATTAA+TGG | 0.174492 | 4_4:+47608446 | Msa0684300:CDS |
ATGCCATACCATCGCGTTAT+TGG | 0.192133 | 4_4:+47608001 | Msa0684300:CDS |
CATTCTTTGCTACACGGTTT+AGG | 0.223208 | 4_4:+47608217 | Msa0684300:CDS |
AAATGCAGAACCGCATTTCT+AGG | 0.241890 | 4_4:-47608132 | None:intergenic |
CTCCCTAACCATATCCAAAT+TGG | 0.268685 | 4_4:-47607143 | None:intergenic |
TTTGTTCAGTCAATTGTTAA+TGG | 0.288838 | 4_4:+47608180 | Msa0684300:CDS |
ATCAGAGTTATGAATATCTA+AGG | 0.292408 | 4_4:-47606813 | None:intergenic |
TGAATCATCCAATTTGGATA+TGG | 0.301149 | 4_4:+47607135 | Msa0684300:CDS |
CAAACAGCTTCCATTGAATT+CGG | 0.304465 | 4_4:+47608437 | Msa0684300:CDS |
ATTCTTTGCTACACGGTTTA+GGG | 0.306681 | 4_4:+47608218 | Msa0684300:CDS |
TATCTAAGGGGTGTTGATTA+GGG | 0.313284 | 4_4:-47606799 | None:intergenic |
ATATCTAAGGGGTGTTGATT+AGG | 0.323460 | 4_4:-47606800 | None:intergenic |
CATCCAATTTGGATATGGTT+AGG | 0.330014 | 4_4:+47607140 | Msa0684300:CDS |
TGCCATACCATCGCGTTATT+GGG | 0.330847 | 4_4:+47608002 | Msa0684300:CDS |
ACTCTATCCCGGTGATCTTC+AGG | 0.333841 | 4_4:-47607882 | None:intergenic |
GGATACCAAAATCAATGATA+TGG | 0.351602 | 4_4:-47607795 | None:intergenic |
CGAGTCTTCCCTCCATTTGA+TGG | 0.357746 | 4_4:-47607400 | None:intergenic |
TGATCAGAAACAGGGGTATC+AGG | 0.360045 | 4_4:-47606905 | None:intergenic |
TTTATATGCTTCCACATGTT+GGG | 0.369926 | 4_4:+47608563 | Msa0684300:CDS |
CATATAAACAGTGGCAGGTT+AGG | 0.372839 | 4_4:+47608397 | Msa0684300:CDS |
ATTGCTATTGCTGTTGCTGC+TGG | 0.378194 | 4_4:-47606843 | None:intergenic |
GGCCTTGAGGCACGCCTTGT+CGG | 0.379088 | 4_4:+47607601 | Msa0684300:CDS |
ATTAGCATTCCTGTTGTCAT+TGG | 0.384143 | 4_4:-47607500 | None:intergenic |
CGCCTTGTCGGCGATGGTAC+TGG | 0.387590 | 4_4:+47607613 | Msa0684300:CDS |
ATTTCTCAACTTCATTCTAC+TGG | 0.395432 | 4_4:+47606962 | Msa0684300:CDS |
TAGTGATGGACTCAGAGATT+TGG | 0.396758 | 4_4:+47606988 | Msa0684300:CDS |
ATCCCGGTGATCTTCAGGTT+TGG | 0.401423 | 4_4:-47607877 | None:intergenic |
TGATTAACATGATCAGAAAC+AGG | 0.407330 | 4_4:-47606914 | None:intergenic |
ATTATCAGAGATGTTTGATA+AGG | 0.416031 | 4_4:+47607294 | Msa0684300:CDS |
TCCATTAATTCCGAATTCAA+TGG | 0.422266 | 4_4:-47608447 | None:intergenic |
AGAAAATCCGTTTGTGTTGA+AGG | 0.430622 | 4_4:+47607168 | Msa0684300:CDS |
CTGCCACTGTTTATATGTCT+CGG | 0.432575 | 4_4:-47608391 | None:intergenic |
ATGAGCTACTGAAGCAGATT+AGG | 0.435797 | 4_4:+47607521 | Msa0684300:CDS |
AGGCAACATTCTTCACCCTC+TGG | 0.447707 | 4_4:+47607541 | Msa0684300:CDS |
CTGTATATGCCAATGACAAC+AGG | 0.450042 | 4_4:+47607491 | Msa0684300:CDS |
AGAATGAAACAATAGATTTG+AGG | 0.453249 | 4_4:+47607443 | Msa0684300:CDS |
GGCAACATTCTTCACCCTCT+GGG | 0.453926 | 4_4:+47607542 | Msa0684300:CDS |
ATGGAAAGAATCGAAGAAAC+TGG | 0.455010 | 4_4:+47607928 | Msa0684300:CDS |
GTTTCTTCGATTCTTTCCAT+TGG | 0.459734 | 4_4:-47607925 | None:intergenic |
TTCAAGAAAAGTTTAGAAGA+AGG | 0.460061 | 4_4:+47607070 | Msa0684300:CDS |
ATCCAATTTGGATATGGTTA+GGG | 0.463279 | 4_4:+47607141 | Msa0684300:CDS |
TTTCTACCCTTCAACACAAA+CGG | 0.464697 | 4_4:-47607175 | None:intergenic |
GTGGTAACATTGCTGTAACT+TGG | 0.472903 | 4_4:-47608481 | None:intergenic |
TCTGTCATTTGTAAGCTAAG+TGG | 0.475139 | 4_4:-47606731 | None:intergenic |
GACAACAATTGGATGCTTCA+AGG | 0.476004 | 4_4:+47608525 | Msa0684300:CDS |
GGGATAGAGTTCCCTTTACC+TGG | 0.477006 | 4_4:+47607895 | Msa0684300:CDS |
GTAGAGATCCTCTTGGTGTT+CGG | 0.479560 | 4_4:-47607658 | None:intergenic |
GAATGAAGTTGAGAAATAGC+AGG | 0.479774 | 4_4:-47606956 | None:intergenic |
TGCCACTGTTTATATGTCTC+GGG | 0.483709 | 4_4:-47608390 | None:intergenic |
CCGCAGCCTCAACTCTTGAC+TGG | 0.485147 | 4_4:+47607109 | Msa0684300:CDS |
GAGGAGTCACCTCCATCAAA+TGG | 0.486751 | 4_4:+47607388 | Msa0684300:CDS |
TTGGACGAAAACCAGGTAAA+GGG | 0.491920 | 4_4:-47607906 | None:intergenic |
ACAATTGGATGCTTCAAGGT+TGG | 0.492282 | 4_4:+47608529 | Msa0684300:CDS |
GGGTGTTGATTAGGGGAAAG+AGG | 0.492324 | 4_4:-47606791 | None:intergenic |
AAGAACAAGAAGAAGAAGCT+TGG | 0.493244 | 4_4:+47607227 | Msa0684300:CDS |
CTTTCCATTGGACGAAAACC+AGG | 0.495527 | 4_4:-47607913 | None:intergenic |
AACAGGGGTATCAGGTGAAA+GGG | 0.498413 | 4_4:-47606897 | None:intergenic |
AAGTAATGAGCCAACCTTTG+TGG | 0.500867 | 4_4:-47607571 | None:intergenic |
GAAAATGATTCCTTGCAGAA+TGG | 0.503064 | 4_4:+47607352 | Msa0684300:CDS |
TTGGCCACTGAAAACCATAT+AGG | 0.503360 | 4_4:-47607816 | None:intergenic |
CCGGTGATCTTCAGGTTTGG+AGG | 0.507786 | 4_4:-47607874 | None:intergenic |
TTCCCAATAACGCGATGGTA+TGG | 0.510255 | 4_4:-47608004 | None:intergenic |
GCAGAATGGACAAGTGAAAA+CGG | 0.510872 | 4_4:+47607366 | Msa0684300:CDS |
TATAGAAGGTTATATGGCCT+CGG | 0.511500 | 4_4:+47606607 | None:intergenic |
AAGGCGTGCCTCAAGGCCAT+TGG | 0.511609 | 4_4:-47607596 | None:intergenic |
AGGTTATATGGCCTCGGAGA+CGG | 0.516005 | 4_4:+47606613 | None:intergenic |
CATTCTTCACCCTCTGGGGA+TGG | 0.516297 | 4_4:+47607547 | Msa0684300:CDS |
TTGGGAAACAATTCGAGTTG+AGG | 0.525214 | 4_4:+47608020 | Msa0684300:CDS |
CGCCGACAAGGCGTGCCTCA+AGG | 0.525318 | 4_4:-47607603 | None:intergenic |
CTAAACCGTGTAGCAAAGAA+TGG | 0.525919 | 4_4:-47608216 | None:intergenic |
GGATTCTTCTATTACACAGA+TGG | 0.528072 | 4_4:+47607009 | Msa0684300:CDS |
GTGGATCATAGAACGGTCTC+TGG | 0.528421 | 4_4:-47606712 | None:intergenic |
GGTATGGCATTAAACTCAAA+GGG | 0.528598 | 4_4:-47607988 | None:intergenic |
ATTGGACGAAAACCAGGTAA+AGG | 0.530391 | 4_4:-47607907 | None:intergenic |
TTGGCTCATTACTTTGCCAA+TGG | 0.532425 | 4_4:+47607580 | Msa0684300:CDS |
CATTAAACTCAAAGGGAACA+TGG | 0.533197 | 4_4:-47607981 | None:intergenic |
TACCACGCGAAAACAAATAC+AGG | 0.534979 | 4_4:+47608289 | Msa0684300:CDS |
CGAGACATATAAACAGTGGC+AGG | 0.537307 | 4_4:+47608392 | Msa0684300:CDS |
CAGGTTAGGAATACAAGAGC+TGG | 0.537591 | 4_4:+47608411 | Msa0684300:CDS |
GAAAATCCGTTTGTGTTGAA+GGG | 0.541171 | 4_4:+47607169 | Msa0684300:CDS |
GTCAAGAGTTGAGGCTGCGG+AGG | 0.544335 | 4_4:-47607106 | None:intergenic |
CTCCAGTACCATCGCCGACA+AGG | 0.546196 | 4_4:-47607615 | None:intergenic |
AATGAAGTTGAGAAATAGCA+GGG | 0.546812 | 4_4:-47606955 | None:intergenic |
TTAGATATTCATAACTCTGA+TGG | 0.546938 | 4_4:+47606815 | Msa0684300:CDS |
CATTCTACTGGTGTTAGTGA+TGG | 0.548607 | 4_4:+47606974 | Msa0684300:CDS |
GTTCATAAACCAAATCCTGA+TGG | 0.550468 | 4_4:+47606676 | Msa0684300:CDS |
TGGGGATGGACCACAAAGGT+TGG | 0.550649 | 4_4:+47607561 | Msa0684300:CDS |
TCAGAGTTATGAATATCTAA+GGG | 0.551258 | 4_4:-47606812 | None:intergenic |
TACCAAAATCAATGATATGG+AGG | 0.553791 | 4_4:-47607792 | None:intergenic |
CTCCAAACCTGAAGATCACC+GGG | 0.554977 | 4_4:+47607875 | Msa0684300:CDS |
TGGTATGGCATTAAACTCAA+AGG | 0.555962 | 4_4:-47607989 | None:intergenic |
AGGTAAAGGGAACTCTATCC+CGG | 0.560031 | 4_4:-47607893 | None:intergenic |
CCTCCAAACCTGAAGATCAC+CGG | 0.561178 | 4_4:+47607874 | Msa0684300:CDS |
AAATCAGTGTCTTCGAGGGA+AGG | 0.562271 | 4_4:-47606638 | None:intergenic |
GAGGCACGCCTTGTCGGCGA+TGG | 0.563864 | 4_4:+47607607 | Msa0684300:CDS |
AAACAGGGGTATCAGGTGAA+AGG | 0.568952 | 4_4:-47606898 | None:intergenic |
ATGAACGTTGTAGCTTGTGA+AGG | 0.570356 | 4_4:+47608348 | Msa0684300:CDS |
CCAGTCAAGAGTTGAGGCTG+CGG | 0.571987 | 4_4:-47607109 | None:intergenic |
ATTCGCCATTCTTTGCTACA+CGG | 0.575217 | 4_4:+47608211 | Msa0684300:CDS |
TGGATGCTTCAAGGTTGGAA+AGG | 0.577566 | 4_4:+47608534 | Msa0684300:CDS |
TCTTGGTGTTCGGAGAGGAA+TGG | 0.578017 | 4_4:-47607648 | None:intergenic |
CTCAGCAGTAGAGATCCTCT+TGG | 0.580706 | 4_4:-47607665 | None:intergenic |
GTGATGTGAGTTGATTATGC+TGG | 0.583220 | 4_4:-47608588 | None:intergenic |
CTTTGCTACACGGTTTAGGG+AGG | 0.591419 | 4_4:+47608221 | Msa0684300:CDS |
ATGGAAGCGCTTGCAATAGT+CGG | 0.593097 | 4_4:-47607962 | None:intergenic |
TTACTTTGCCAATGGCCTTG+AGG | 0.593344 | 4_4:+47607588 | Msa0684300:CDS |
AAACAAATACAGGATGCTGA+TGG | 0.598030 | 4_4:+47608299 | Msa0684300:CDS |
CAATTTGGATATGGTTAGGG+AGG | 0.598257 | 4_4:+47607144 | Msa0684300:CDS |
TTTCACTTGTCCATTCTGCA+AGG | 0.603209 | 4_4:-47607362 | None:intergenic |
ATCTAAGGGGTGTTGATTAG+GGG | 0.605109 | 4_4:-47606798 | None:intergenic |
ACCAAAATCAATGATATGGA+GGG | 0.610467 | 4_4:-47607791 | None:intergenic |
ATACAGGATGCTGATGGAGA+GGG | 0.620955 | 4_4:+47608305 | Msa0684300:CDS |
ACAGGGGTATCAGGTGAAAG+GGG | 0.622249 | 4_4:-47606896 | None:intergenic |
ATTGTTTCCCAATAACGCGA+TGG | 0.623674 | 4_4:-47608009 | None:intergenic |
GTCTTCCCTCCATTTGATGG+AGG | 0.626646 | 4_4:-47607397 | None:intergenic |
GAGTCACCTCCATCAAATGG+AGG | 0.628730 | 4_4:+47607391 | Msa0684300:CDS |
TCAAAACCAGTCAAGAGTTG+AGG | 0.630836 | 4_4:-47607115 | None:intergenic |
AATACAGGATGCTGATGGAG+AGG | 0.637418 | 4_4:+47608304 | Msa0684300:CDS |
CTTTGTGGTCCATCCCCAGA+GGG | 0.638386 | 4_4:-47607556 | None:intergenic |
ATTCCTCTCCGAACACCAAG+AGG | 0.643154 | 4_4:+47607650 | Msa0684300:CDS |
AGTCACCTCCATCAAATGGA+GGG | 0.643984 | 4_4:+47607392 | Msa0684300:CDS |
AAGCTAAGTGGATCATAGAA+CGG | 0.644877 | 4_4:-47606719 | None:intergenic |
GCAACATTCTTCACCCTCTG+GGG | 0.646104 | 4_4:+47607543 | Msa0684300:CDS |
TTATGCTGGCACCCAACATG+TGG | 0.647174 | 4_4:-47608574 | None:intergenic |
AAGGTTTAGAGAGAGTTGAG+AGG | 0.649221 | 4_4:+47608367 | Msa0684300:CDS |
AAGACTCGTCGTAAGAAACA+AGG | 0.649427 | 4_4:+47607415 | Msa0684300:CDS |
CCTTTGTGGTCCATCCCCAG+AGG | 0.650985 | 4_4:-47607557 | None:intergenic |
GATCCTCTTGGTGTTCGGAG+AGG | 0.659641 | 4_4:-47607653 | None:intergenic |
GATTAACATGATCAGAAACA+GGG | 0.660585 | 4_4:-47606913 | None:intergenic |
CAATAGCAATAGCAGCGTCG+AGG | 0.672364 | 4_4:+47606856 | Msa0684300:CDS |
CAGAGTTATGAATATCTAAG+GGG | 0.672632 | 4_4:-47606811 | None:intergenic |
AGCAAACAGTCCTAGAAATG+CGG | 0.677440 | 4_4:+47608122 | Msa0684300:CDS |
ATGAAGTTGAGAAATAGCAG+GGG | 0.678292 | 4_4:-47606954 | None:intergenic |
TCTTAAAATCAAGAGCAATG+AGG | 0.688807 | 4_4:+47608044 | Msa0684300:CDS |
GGCCCGAGACATATAAACAG+TGG | 0.698214 | 4_4:+47608388 | Msa0684300:CDS |
GAGGGAAGGATCCGTCTCCG+AGG | 0.699247 | 4_4:-47606624 | None:intergenic |
AGCTATTAGTGCTATCGACG+AGG | 0.704999 | 4_4:+47607267 | Msa0684300:CDS |
CTGATGGAGAGGGAAAGTAT+CGG | 0.714910 | 4_4:+47608315 | Msa0684300:CDS |
ATTAACATGATCAGAAACAG+GGG | 0.716208 | 4_4:-47606912 | None:intergenic |
CCTCTGGGGATGGACCACAA+AGG | 0.754738 | 4_4:+47607557 | Msa0684300:CDS |
GAATGGACAAGTGAAAACGG+AGG | 0.763230 | 4_4:+47607369 | Msa0684300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATAAAAACTTTATAAGTAT+TGG | - | chr4_4:47607838-47607857 | None:intergenic | 15.0% |
!! | GATAAAAACTTTATAAGTAT+TGG | - | chr4_4:47607838-47607857 | None:intergenic | 15.0% |
!!! | TTCTAAACTTTTCTTGAATA+GGG | - | chr4_4:47607068-47607087 | None:intergenic | 20.0% |
!! | GATGAGATTTAAGAATTTAT+TGG | + | chr4_4:47608086-47608105 | Msa0684300:CDS | 20.0% |
!!! | TTCTAAACTTTTCTTGAATA+GGG | - | chr4_4:47607068-47607087 | None:intergenic | 20.0% |
!! | GATGAGATTTAAGAATTTAT+TGG | + | chr4_4:47608086-47608105 | Msa0684300:CDS | 20.0% |
! | TCAGAGTTATGAATATCTAA+GGG | - | chr4_4:47606815-47606834 | None:intergenic | 25.0% |
! | ATCAGAGTTATGAATATCTA+AGG | - | chr4_4:47606816-47606835 | None:intergenic | 25.0% |
! | TTAGATATTCATAACTCTGA+TGG | + | chr4_4:47606815-47606834 | Msa0684300:CDS | 25.0% |
!! | CTTCTAAACTTTTCTTGAAT+AGG | - | chr4_4:47607069-47607088 | None:intergenic | 25.0% |
! | TTCAAGAAAAGTTTAGAAGA+AGG | + | chr4_4:47607070-47607089 | Msa0684300:CDS | 25.0% |
! | ATTATCAGAGATGTTTGATA+AGG | + | chr4_4:47607294-47607313 | Msa0684300:CDS | 25.0% |
!! | GAATCATTTTCATTGCATAA+TGG | - | chr4_4:47607343-47607362 | None:intergenic | 25.0% |
! | AGAATGAAACAATAGATTTG+AGG | + | chr4_4:47607443-47607462 | Msa0684300:CDS | 25.0% |
!! | AAGTATGCAAACTTTTTGAA+AGG | - | chr4_4:47607727-47607746 | None:intergenic | 25.0% |
!!! | ATTGATTTTGGTATCCTATA+TGG | + | chr4_4:47607802-47607821 | Msa0684300:CDS | 25.0% |
!! | AAGTTTTTATCAGATAGAGA+AGG | + | chr4_4:47607847-47607866 | Msa0684300:CDS | 25.0% |
! | TTTGTTCAGTCAATTGTTAA+TGG | + | chr4_4:47608180-47608199 | Msa0684300:CDS | 25.0% |
!! | TTTTTGATGTAGACAACAAT+TGG | + | chr4_4:47608514-47608533 | Msa0684300:CDS | 25.0% |
! | TCAGAGTTATGAATATCTAA+GGG | - | chr4_4:47606815-47606834 | None:intergenic | 25.0% |
! | ATCAGAGTTATGAATATCTA+AGG | - | chr4_4:47606816-47606835 | None:intergenic | 25.0% |
! | TTAGATATTCATAACTCTGA+TGG | + | chr4_4:47606815-47606834 | Msa0684300:CDS | 25.0% |
!! | CTTCTAAACTTTTCTTGAAT+AGG | - | chr4_4:47607069-47607088 | None:intergenic | 25.0% |
! | TTCAAGAAAAGTTTAGAAGA+AGG | + | chr4_4:47607070-47607089 | Msa0684300:CDS | 25.0% |
! | ATTATCAGAGATGTTTGATA+AGG | + | chr4_4:47607294-47607313 | Msa0684300:CDS | 25.0% |
!! | GAATCATTTTCATTGCATAA+TGG | - | chr4_4:47607343-47607362 | None:intergenic | 25.0% |
! | AGAATGAAACAATAGATTTG+AGG | + | chr4_4:47607443-47607462 | Msa0684300:CDS | 25.0% |
!! | AAGTATGCAAACTTTTTGAA+AGG | - | chr4_4:47607727-47607746 | None:intergenic | 25.0% |
!!! | ATTGATTTTGGTATCCTATA+TGG | + | chr4_4:47607802-47607821 | Msa0684300:CDS | 25.0% |
!! | AAGTTTTTATCAGATAGAGA+AGG | + | chr4_4:47607847-47607866 | Msa0684300:CDS | 25.0% |
! | TTTGTTCAGTCAATTGTTAA+TGG | + | chr4_4:47608180-47608199 | Msa0684300:CDS | 25.0% |
!! | TTTTTGATGTAGACAACAAT+TGG | + | chr4_4:47608514-47608533 | Msa0684300:CDS | 25.0% |
CAGAGTTATGAATATCTAAG+GGG | - | chr4_4:47606814-47606833 | None:intergenic | 30.0% | |
ATTAACATGATCAGAAACAG+GGG | - | chr4_4:47606915-47606934 | None:intergenic | 30.0% | |
GATTAACATGATCAGAAACA+GGG | - | chr4_4:47606916-47606935 | None:intergenic | 30.0% | |
TGATTAACATGATCAGAAAC+AGG | - | chr4_4:47606917-47606936 | None:intergenic | 30.0% | |
AATGAAGTTGAGAAATAGCA+GGG | - | chr4_4:47606958-47606977 | None:intergenic | 30.0% | |
ATTTCTCAACTTCATTCTAC+TGG | + | chr4_4:47606962-47606981 | Msa0684300:CDS | 30.0% | |
!!! | TGGTTTTGAATCATCCAATT+TGG | + | chr4_4:47607129-47607148 | Msa0684300:CDS | 30.0% |
TGAATCATCCAATTTGGATA+TGG | + | chr4_4:47607135-47607154 | Msa0684300:CDS | 30.0% | |
ATCCAATTTGGATATGGTTA+GGG | + | chr4_4:47607141-47607160 | Msa0684300:CDS | 30.0% | |
ACCAAAATCAATGATATGGA+GGG | - | chr4_4:47607794-47607813 | None:intergenic | 30.0% | |
TACCAAAATCAATGATATGG+AGG | - | chr4_4:47607795-47607814 | None:intergenic | 30.0% | |
GGATACCAAAATCAATGATA+TGG | - | chr4_4:47607798-47607817 | None:intergenic | 30.0% | |
! | TTTTTATCAGATAGAGAAGG+TGG | + | chr4_4:47607850-47607869 | Msa0684300:CDS | 30.0% |
TCTTAAAATCAAGAGCAATG+AGG | + | chr4_4:47608044-47608063 | Msa0684300:CDS | 30.0% | |
ATTGACTGAACAAAAATAGC+AGG | - | chr4_4:47608174-47608193 | None:intergenic | 30.0% | |
TCCATTGAATTCGGAATTAA+TGG | + | chr4_4:47608446-47608465 | Msa0684300:CDS | 30.0% | |
TCCATTAATTCCGAATTCAA+TGG | - | chr4_4:47608450-47608469 | None:intergenic | 30.0% | |
! | CGGAATTAATGGACAAATTT+AGG | + | chr4_4:47608457-47608476 | Msa0684300:CDS | 30.0% |
CATCAAAAACAAAGTCTTTG+TGG | - | chr4_4:47608503-47608522 | None:intergenic | 30.0% | |
! | TTTTATATGCTTCCACATGT+TGG | + | chr4_4:47608562-47608581 | Msa0684300:CDS | 30.0% |
TTTATATGCTTCCACATGTT+GGG | + | chr4_4:47608563-47608582 | Msa0684300:CDS | 30.0% | |
CAGAGTTATGAATATCTAAG+GGG | - | chr4_4:47606814-47606833 | None:intergenic | 30.0% | |
ATTAACATGATCAGAAACAG+GGG | - | chr4_4:47606915-47606934 | None:intergenic | 30.0% | |
GATTAACATGATCAGAAACA+GGG | - | chr4_4:47606916-47606935 | None:intergenic | 30.0% | |
TGATTAACATGATCAGAAAC+AGG | - | chr4_4:47606917-47606936 | None:intergenic | 30.0% | |
AATGAAGTTGAGAAATAGCA+GGG | - | chr4_4:47606958-47606977 | None:intergenic | 30.0% | |
ATTTCTCAACTTCATTCTAC+TGG | + | chr4_4:47606962-47606981 | Msa0684300:CDS | 30.0% | |
!!! | TGGTTTTGAATCATCCAATT+TGG | + | chr4_4:47607129-47607148 | Msa0684300:CDS | 30.0% |
TGAATCATCCAATTTGGATA+TGG | + | chr4_4:47607135-47607154 | Msa0684300:CDS | 30.0% | |
ATCCAATTTGGATATGGTTA+GGG | + | chr4_4:47607141-47607160 | Msa0684300:CDS | 30.0% | |
ACCAAAATCAATGATATGGA+GGG | - | chr4_4:47607794-47607813 | None:intergenic | 30.0% | |
TACCAAAATCAATGATATGG+AGG | - | chr4_4:47607795-47607814 | None:intergenic | 30.0% | |
GGATACCAAAATCAATGATA+TGG | - | chr4_4:47607798-47607817 | None:intergenic | 30.0% | |
! | TTTTTATCAGATAGAGAAGG+TGG | + | chr4_4:47607850-47607869 | Msa0684300:CDS | 30.0% |
TCTTAAAATCAAGAGCAATG+AGG | + | chr4_4:47608044-47608063 | Msa0684300:CDS | 30.0% | |
ATTGACTGAACAAAAATAGC+AGG | - | chr4_4:47608174-47608193 | None:intergenic | 30.0% | |
TCCATTGAATTCGGAATTAA+TGG | + | chr4_4:47608446-47608465 | Msa0684300:CDS | 30.0% | |
TCCATTAATTCCGAATTCAA+TGG | - | chr4_4:47608450-47608469 | None:intergenic | 30.0% | |
! | CGGAATTAATGGACAAATTT+AGG | + | chr4_4:47608457-47608476 | Msa0684300:CDS | 30.0% |
CATCAAAAACAAAGTCTTTG+TGG | - | chr4_4:47608503-47608522 | None:intergenic | 30.0% | |
! | TTTTATATGCTTCCACATGT+TGG | + | chr4_4:47608562-47608581 | Msa0684300:CDS | 30.0% |
TTTATATGCTTCCACATGTT+GGG | + | chr4_4:47608563-47608582 | Msa0684300:CDS | 30.0% | |
TGAAAAATCAGTGTCTTCGA+GGG | - | chr4_4:47606645-47606664 | None:intergenic | 35.0% | |
!!! | GACACTGATTTTTCAGATAC+TGG | + | chr4_4:47606650-47606669 | Msa0684300:CDS | 35.0% |
GTTCATAAACCAAATCCTGA+TGG | + | chr4_4:47606676-47606695 | Msa0684300:CDS | 35.0% | |
! | CATTTTCTTCCATCAGGATT+TGG | - | chr4_4:47606688-47606707 | None:intergenic | 35.0% |
AAGCTAAGTGGATCATAGAA+CGG | - | chr4_4:47606722-47606741 | None:intergenic | 35.0% | |
! | TCTGTCATTTGTAAGCTAAG+TGG | - | chr4_4:47606734-47606753 | None:intergenic | 35.0% |
!! | TATCTAAGGGGTGTTGATTA+GGG | - | chr4_4:47606802-47606821 | None:intergenic | 35.0% |
!! | ATATCTAAGGGGTGTTGATT+AGG | - | chr4_4:47606803-47606822 | None:intergenic | 35.0% |
ATGAAGTTGAGAAATAGCAG+GGG | - | chr4_4:47606957-47606976 | None:intergenic | 35.0% | |
GAATGAAGTTGAGAAATAGC+AGG | - | chr4_4:47606959-47606978 | None:intergenic | 35.0% | |
GGATTCTTCTATTACACAGA+TGG | + | chr4_4:47607009-47607028 | Msa0684300:CDS | 35.0% | |
CATCCAATTTGGATATGGTT+AGG | + | chr4_4:47607140-47607159 | Msa0684300:CDS | 35.0% | |
AGAAAATCCGTTTGTGTTGA+AGG | + | chr4_4:47607168-47607187 | Msa0684300:CDS | 35.0% | |
GAAAATCCGTTTGTGTTGAA+GGG | + | chr4_4:47607169-47607188 | Msa0684300:CDS | 35.0% | |
TTTCTACCCTTCAACACAAA+CGG | - | chr4_4:47607178-47607197 | None:intergenic | 35.0% | |
AAGAACAAGAAGAAGAAGCT+TGG | + | chr4_4:47607227-47607246 | Msa0684300:CDS | 35.0% | |
! | TGATAAGGTTTTGCTTGATG+TGG | + | chr4_4:47607309-47607328 | Msa0684300:CDS | 35.0% |
! | GATAAGGTTTTGCTTGATGT+GGG | + | chr4_4:47607310-47607329 | Msa0684300:CDS | 35.0% |
GAAAATGATTCCTTGCAGAA+TGG | + | chr4_4:47607352-47607371 | Msa0684300:CDS | 35.0% | |
ATTAGCATTCCTGTTGTCAT+TGG | - | chr4_4:47607503-47607522 | None:intergenic | 35.0% | |
!!! | ACCCTCCATATCATTGATTT+TGG | + | chr4_4:47607790-47607809 | Msa0684300:CDS | 35.0% |
! | GTATCCTATATGGTTTTCAG+TGG | + | chr4_4:47607812-47607831 | Msa0684300:CDS | 35.0% |
GTTTCTTCGATTCTTTCCAT+TGG | - | chr4_4:47607928-47607947 | None:intergenic | 35.0% | |
ATGGAAAGAATCGAAGAAAC+TGG | + | chr4_4:47607928-47607947 | Msa0684300:CDS | 35.0% | |
CATTAAACTCAAAGGGAACA+TGG | - | chr4_4:47607984-47608003 | None:intergenic | 35.0% | |
GGTATGGCATTAAACTCAAA+GGG | - | chr4_4:47607991-47608010 | None:intergenic | 35.0% | |
TGGTATGGCATTAAACTCAA+AGG | - | chr4_4:47607992-47608011 | None:intergenic | 35.0% | |
ATTCTTTGCTACACGGTTTA+GGG | + | chr4_4:47608218-47608237 | Msa0684300:CDS | 35.0% | |
AAACAAATACAGGATGCTGA+TGG | + | chr4_4:47608299-47608318 | Msa0684300:CDS | 35.0% | |
CAAACAGCTTCCATTGAATT+CGG | + | chr4_4:47608437-47608456 | Msa0684300:CDS | 35.0% | |
TGAAAAATCAGTGTCTTCGA+GGG | - | chr4_4:47606645-47606664 | None:intergenic | 35.0% | |
!!! | GACACTGATTTTTCAGATAC+TGG | + | chr4_4:47606650-47606669 | Msa0684300:CDS | 35.0% |
GTTCATAAACCAAATCCTGA+TGG | + | chr4_4:47606676-47606695 | Msa0684300:CDS | 35.0% | |
! | CATTTTCTTCCATCAGGATT+TGG | - | chr4_4:47606688-47606707 | None:intergenic | 35.0% |
AAGCTAAGTGGATCATAGAA+CGG | - | chr4_4:47606722-47606741 | None:intergenic | 35.0% | |
! | TCTGTCATTTGTAAGCTAAG+TGG | - | chr4_4:47606734-47606753 | None:intergenic | 35.0% |
!! | TATCTAAGGGGTGTTGATTA+GGG | - | chr4_4:47606802-47606821 | None:intergenic | 35.0% |
!! | ATATCTAAGGGGTGTTGATT+AGG | - | chr4_4:47606803-47606822 | None:intergenic | 35.0% |
ATGAAGTTGAGAAATAGCAG+GGG | - | chr4_4:47606957-47606976 | None:intergenic | 35.0% | |
GAATGAAGTTGAGAAATAGC+AGG | - | chr4_4:47606959-47606978 | None:intergenic | 35.0% | |
GGATTCTTCTATTACACAGA+TGG | + | chr4_4:47607009-47607028 | Msa0684300:CDS | 35.0% | |
CATCCAATTTGGATATGGTT+AGG | + | chr4_4:47607140-47607159 | Msa0684300:CDS | 35.0% | |
AGAAAATCCGTTTGTGTTGA+AGG | + | chr4_4:47607168-47607187 | Msa0684300:CDS | 35.0% | |
GAAAATCCGTTTGTGTTGAA+GGG | + | chr4_4:47607169-47607188 | Msa0684300:CDS | 35.0% | |
TTTCTACCCTTCAACACAAA+CGG | - | chr4_4:47607178-47607197 | None:intergenic | 35.0% | |
AAGAACAAGAAGAAGAAGCT+TGG | + | chr4_4:47607227-47607246 | Msa0684300:CDS | 35.0% | |
! | TGATAAGGTTTTGCTTGATG+TGG | + | chr4_4:47607309-47607328 | Msa0684300:CDS | 35.0% |
! | GATAAGGTTTTGCTTGATGT+GGG | + | chr4_4:47607310-47607329 | Msa0684300:CDS | 35.0% |
GAAAATGATTCCTTGCAGAA+TGG | + | chr4_4:47607352-47607371 | Msa0684300:CDS | 35.0% | |
ATTAGCATTCCTGTTGTCAT+TGG | - | chr4_4:47607503-47607522 | None:intergenic | 35.0% | |
!!! | ACCCTCCATATCATTGATTT+TGG | + | chr4_4:47607790-47607809 | Msa0684300:CDS | 35.0% |
! | GTATCCTATATGGTTTTCAG+TGG | + | chr4_4:47607812-47607831 | Msa0684300:CDS | 35.0% |
GTTTCTTCGATTCTTTCCAT+TGG | - | chr4_4:47607928-47607947 | None:intergenic | 35.0% | |
ATGGAAAGAATCGAAGAAAC+TGG | + | chr4_4:47607928-47607947 | Msa0684300:CDS | 35.0% | |
CATTAAACTCAAAGGGAACA+TGG | - | chr4_4:47607984-47608003 | None:intergenic | 35.0% | |
GGTATGGCATTAAACTCAAA+GGG | - | chr4_4:47607991-47608010 | None:intergenic | 35.0% | |
TGGTATGGCATTAAACTCAA+AGG | - | chr4_4:47607992-47608011 | None:intergenic | 35.0% | |
ATTCTTTGCTACACGGTTTA+GGG | + | chr4_4:47608218-47608237 | Msa0684300:CDS | 35.0% | |
AAACAAATACAGGATGCTGA+TGG | + | chr4_4:47608299-47608318 | Msa0684300:CDS | 35.0% | |
CAAACAGCTTCCATTGAATT+CGG | + | chr4_4:47608437-47608456 | Msa0684300:CDS | 35.0% | |
CTGAAAAATCAGTGTCTTCG+AGG | - | chr4_4:47606646-47606665 | None:intergenic | 40.0% | |
! | GGTCAACATTTTCTTCCATC+AGG | - | chr4_4:47606694-47606713 | None:intergenic | 40.0% |
!! | ATCTAAGGGGTGTTGATTAG+GGG | - | chr4_4:47606801-47606820 | None:intergenic | 40.0% |
! | CATTCTACTGGTGTTAGTGA+TGG | + | chr4_4:47606974-47606993 | Msa0684300:CDS | 40.0% |
!! | TAGTGATGGACTCAGAGATT+TGG | + | chr4_4:47606988-47607007 | Msa0684300:CDS | 40.0% |
TCAAAACCAGTCAAGAGTTG+AGG | - | chr4_4:47607118-47607137 | None:intergenic | 40.0% | |
CTCCCTAACCATATCCAAAT+TGG | - | chr4_4:47607146-47607165 | None:intergenic | 40.0% | |
CAATTTGGATATGGTTAGGG+AGG | + | chr4_4:47607144-47607163 | Msa0684300:CDS | 40.0% | |
TTTCACTTGTCCATTCTGCA+AGG | - | chr4_4:47607365-47607384 | None:intergenic | 40.0% | |
GCAGAATGGACAAGTGAAAA+CGG | + | chr4_4:47607366-47607385 | Msa0684300:CDS | 40.0% | |
AAGACTCGTCGTAAGAAACA+AGG | + | chr4_4:47607415-47607434 | Msa0684300:CDS | 40.0% | |
CTGTATATGCCAATGACAAC+AGG | + | chr4_4:47607491-47607510 | Msa0684300:CDS | 40.0% | |
ATGAGCTACTGAAGCAGATT+AGG | + | chr4_4:47607521-47607540 | Msa0684300:CDS | 40.0% | |
AAGTAATGAGCCAACCTTTG+TGG | - | chr4_4:47607574-47607593 | None:intergenic | 40.0% | |
TTGGCTCATTACTTTGCCAA+TGG | + | chr4_4:47607580-47607599 | Msa0684300:CDS | 40.0% | |
TTGGCCACTGAAAACCATAT+AGG | - | chr4_4:47607819-47607838 | None:intergenic | 40.0% | |
TTGGACGAAAACCAGGTAAA+GGG | - | chr4_4:47607909-47607928 | None:intergenic | 40.0% | |
ATTGGACGAAAACCAGGTAA+AGG | - | chr4_4:47607910-47607929 | None:intergenic | 40.0% | |
!! | TTTACCTGGTTTTCGTCCAA+TGG | + | chr4_4:47607909-47607928 | Msa0684300:CDS | 40.0% |
ATTGTTTCCCAATAACGCGA+TGG | - | chr4_4:47608012-47608031 | None:intergenic | 40.0% | |
!! | TTGGGAAACAATTCGAGTTG+AGG | + | chr4_4:47608020-47608039 | Msa0684300:CDS | 40.0% |
AGCAAACAGTCCTAGAAATG+CGG | + | chr4_4:47608122-47608141 | Msa0684300:CDS | 40.0% | |
AAATGCAGAACCGCATTTCT+AGG | - | chr4_4:47608135-47608154 | None:intergenic | 40.0% | |
ATTCGCCATTCTTTGCTACA+CGG | + | chr4_4:47608211-47608230 | Msa0684300:CDS | 40.0% | |
CTAAACCGTGTAGCAAAGAA+TGG | - | chr4_4:47608219-47608238 | None:intergenic | 40.0% | |
CATTCTTTGCTACACGGTTT+AGG | + | chr4_4:47608217-47608236 | Msa0684300:CDS | 40.0% | |
TACCACGCGAAAACAAATAC+AGG | + | chr4_4:47608289-47608308 | Msa0684300:CDS | 40.0% | |
!! | ATCCTGTATTTGTTTTCGCG+TGG | - | chr4_4:47608294-47608313 | None:intergenic | 40.0% |
! | ATGAACGTTGTAGCTTGTGA+AGG | + | chr4_4:47608348-47608367 | Msa0684300:CDS | 40.0% |
AAGGTTTAGAGAGAGTTGAG+AGG | + | chr4_4:47608367-47608386 | Msa0684300:CDS | 40.0% | |
TGCCACTGTTTATATGTCTC+GGG | - | chr4_4:47608393-47608412 | None:intergenic | 40.0% | |
CTGCCACTGTTTATATGTCT+CGG | - | chr4_4:47608394-47608413 | None:intergenic | 40.0% | |
CATATAAACAGTGGCAGGTT+AGG | + | chr4_4:47608397-47608416 | Msa0684300:CDS | 40.0% | |
GTGGTAACATTGCTGTAACT+TGG | - | chr4_4:47608484-47608503 | None:intergenic | 40.0% | |
GACAACAATTGGATGCTTCA+AGG | + | chr4_4:47608525-47608544 | Msa0684300:CDS | 40.0% | |
ACAATTGGATGCTTCAAGGT+TGG | + | chr4_4:47608529-47608548 | Msa0684300:CDS | 40.0% | |
CTGAAAAATCAGTGTCTTCG+AGG | - | chr4_4:47606646-47606665 | None:intergenic | 40.0% | |
! | GGTCAACATTTTCTTCCATC+AGG | - | chr4_4:47606694-47606713 | None:intergenic | 40.0% |
!! | ATCTAAGGGGTGTTGATTAG+GGG | - | chr4_4:47606801-47606820 | None:intergenic | 40.0% |
! | CATTCTACTGGTGTTAGTGA+TGG | + | chr4_4:47606974-47606993 | Msa0684300:CDS | 40.0% |
!! | TAGTGATGGACTCAGAGATT+TGG | + | chr4_4:47606988-47607007 | Msa0684300:CDS | 40.0% |
TCAAAACCAGTCAAGAGTTG+AGG | - | chr4_4:47607118-47607137 | None:intergenic | 40.0% | |
CTCCCTAACCATATCCAAAT+TGG | - | chr4_4:47607146-47607165 | None:intergenic | 40.0% | |
CAATTTGGATATGGTTAGGG+AGG | + | chr4_4:47607144-47607163 | Msa0684300:CDS | 40.0% | |
TTTCACTTGTCCATTCTGCA+AGG | - | chr4_4:47607365-47607384 | None:intergenic | 40.0% | |
GCAGAATGGACAAGTGAAAA+CGG | + | chr4_4:47607366-47607385 | Msa0684300:CDS | 40.0% | |
AAGACTCGTCGTAAGAAACA+AGG | + | chr4_4:47607415-47607434 | Msa0684300:CDS | 40.0% | |
CTGTATATGCCAATGACAAC+AGG | + | chr4_4:47607491-47607510 | Msa0684300:CDS | 40.0% | |
ATGAGCTACTGAAGCAGATT+AGG | + | chr4_4:47607521-47607540 | Msa0684300:CDS | 40.0% | |
AAGTAATGAGCCAACCTTTG+TGG | - | chr4_4:47607574-47607593 | None:intergenic | 40.0% | |
TTGGCTCATTACTTTGCCAA+TGG | + | chr4_4:47607580-47607599 | Msa0684300:CDS | 40.0% | |
TTGGCCACTGAAAACCATAT+AGG | - | chr4_4:47607819-47607838 | None:intergenic | 40.0% | |
TTGGACGAAAACCAGGTAAA+GGG | - | chr4_4:47607909-47607928 | None:intergenic | 40.0% | |
ATTGGACGAAAACCAGGTAA+AGG | - | chr4_4:47607910-47607929 | None:intergenic | 40.0% | |
!! | TTTACCTGGTTTTCGTCCAA+TGG | + | chr4_4:47607909-47607928 | Msa0684300:CDS | 40.0% |
ATTGTTTCCCAATAACGCGA+TGG | - | chr4_4:47608012-47608031 | None:intergenic | 40.0% | |
!! | TTGGGAAACAATTCGAGTTG+AGG | + | chr4_4:47608020-47608039 | Msa0684300:CDS | 40.0% |
AGCAAACAGTCCTAGAAATG+CGG | + | chr4_4:47608122-47608141 | Msa0684300:CDS | 40.0% | |
AAATGCAGAACCGCATTTCT+AGG | - | chr4_4:47608135-47608154 | None:intergenic | 40.0% | |
ATTCGCCATTCTTTGCTACA+CGG | + | chr4_4:47608211-47608230 | Msa0684300:CDS | 40.0% | |
CTAAACCGTGTAGCAAAGAA+TGG | - | chr4_4:47608219-47608238 | None:intergenic | 40.0% | |
CATTCTTTGCTACACGGTTT+AGG | + | chr4_4:47608217-47608236 | Msa0684300:CDS | 40.0% | |
TACCACGCGAAAACAAATAC+AGG | + | chr4_4:47608289-47608308 | Msa0684300:CDS | 40.0% | |
!! | ATCCTGTATTTGTTTTCGCG+TGG | - | chr4_4:47608294-47608313 | None:intergenic | 40.0% |
! | ATGAACGTTGTAGCTTGTGA+AGG | + | chr4_4:47608348-47608367 | Msa0684300:CDS | 40.0% |
AAGGTTTAGAGAGAGTTGAG+AGG | + | chr4_4:47608367-47608386 | Msa0684300:CDS | 40.0% | |
TGCCACTGTTTATATGTCTC+GGG | - | chr4_4:47608393-47608412 | None:intergenic | 40.0% | |
CTGCCACTGTTTATATGTCT+CGG | - | chr4_4:47608394-47608413 | None:intergenic | 40.0% | |
CATATAAACAGTGGCAGGTT+AGG | + | chr4_4:47608397-47608416 | Msa0684300:CDS | 40.0% | |
GTGGTAACATTGCTGTAACT+TGG | - | chr4_4:47608484-47608503 | None:intergenic | 40.0% | |
GACAACAATTGGATGCTTCA+AGG | + | chr4_4:47608525-47608544 | Msa0684300:CDS | 40.0% | |
ACAATTGGATGCTTCAAGGT+TGG | + | chr4_4:47608529-47608548 | Msa0684300:CDS | 40.0% | |
AAATCAGTGTCTTCGAGGGA+AGG | - | chr4_4:47606641-47606660 | None:intergenic | 45.0% | |
! | ATTGCTATTGCTGTTGCTGC+TGG | - | chr4_4:47606846-47606865 | None:intergenic | 45.0% |
!! | AACAGGGGTATCAGGTGAAA+GGG | - | chr4_4:47606900-47606919 | None:intergenic | 45.0% |
!! | AAACAGGGGTATCAGGTGAA+AGG | - | chr4_4:47606901-47606920 | None:intergenic | 45.0% |
!! | TGATCAGAAACAGGGGTATC+AGG | - | chr4_4:47606908-47606927 | None:intergenic | 45.0% |
AGCTATTAGTGCTATCGACG+AGG | + | chr4_4:47607267-47607286 | Msa0684300:CDS | 45.0% | |
GAATGGACAAGTGAAAACGG+AGG | + | chr4_4:47607369-47607388 | Msa0684300:CDS | 45.0% | |
AGTCACCTCCATCAAATGGA+GGG | + | chr4_4:47607392-47607411 | Msa0684300:CDS | 45.0% | |
! | TTACTTTGCCAATGGCCTTG+AGG | + | chr4_4:47607588-47607607 | Msa0684300:CDS | 45.0% |
!! | GTAGAGATCCTCTTGGTGTT+CGG | - | chr4_4:47607661-47607680 | None:intergenic | 45.0% |
AGGTAAAGGGAACTCTATCC+CGG | - | chr4_4:47607896-47607915 | None:intergenic | 45.0% | |
CTTTCCATTGGACGAAAACC+AGG | - | chr4_4:47607916-47607935 | None:intergenic | 45.0% | |
!! | ATGGAAGCGCTTGCAATAGT+CGG | - | chr4_4:47607965-47607984 | None:intergenic | 45.0% |
ATGCCATACCATCGCGTTAT+TGG | + | chr4_4:47608001-47608020 | Msa0684300:CDS | 45.0% | |
TGCCATACCATCGCGTTATT+GGG | + | chr4_4:47608002-47608021 | Msa0684300:CDS | 45.0% | |
TTCCCAATAACGCGATGGTA+TGG | - | chr4_4:47608007-47608026 | None:intergenic | 45.0% | |
AATACAGGATGCTGATGGAG+AGG | + | chr4_4:47608304-47608323 | Msa0684300:CDS | 45.0% | |
ATACAGGATGCTGATGGAGA+GGG | + | chr4_4:47608305-47608324 | Msa0684300:CDS | 45.0% | |
! | CTGATGGAGAGGGAAAGTAT+CGG | + | chr4_4:47608315-47608334 | Msa0684300:CDS | 45.0% |
CGAGACATATAAACAGTGGC+AGG | + | chr4_4:47608392-47608411 | Msa0684300:CDS | 45.0% | |
CAGGTTAGGAATACAAGAGC+TGG | + | chr4_4:47608411-47608430 | Msa0684300:CDS | 45.0% | |
TGGATGCTTCAAGGTTGGAA+AGG | + | chr4_4:47608534-47608553 | Msa0684300:CDS | 45.0% | |
AAATCAGTGTCTTCGAGGGA+AGG | - | chr4_4:47606641-47606660 | None:intergenic | 45.0% | |
! | ATTGCTATTGCTGTTGCTGC+TGG | - | chr4_4:47606846-47606865 | None:intergenic | 45.0% |
!! | AACAGGGGTATCAGGTGAAA+GGG | - | chr4_4:47606900-47606919 | None:intergenic | 45.0% |
!! | AAACAGGGGTATCAGGTGAA+AGG | - | chr4_4:47606901-47606920 | None:intergenic | 45.0% |
!! | TGATCAGAAACAGGGGTATC+AGG | - | chr4_4:47606908-47606927 | None:intergenic | 45.0% |
AGCTATTAGTGCTATCGACG+AGG | + | chr4_4:47607267-47607286 | Msa0684300:CDS | 45.0% | |
GAATGGACAAGTGAAAACGG+AGG | + | chr4_4:47607369-47607388 | Msa0684300:CDS | 45.0% | |
AGTCACCTCCATCAAATGGA+GGG | + | chr4_4:47607392-47607411 | Msa0684300:CDS | 45.0% | |
! | TTACTTTGCCAATGGCCTTG+AGG | + | chr4_4:47607588-47607607 | Msa0684300:CDS | 45.0% |
!! | GTAGAGATCCTCTTGGTGTT+CGG | - | chr4_4:47607661-47607680 | None:intergenic | 45.0% |
AGGTAAAGGGAACTCTATCC+CGG | - | chr4_4:47607896-47607915 | None:intergenic | 45.0% | |
CTTTCCATTGGACGAAAACC+AGG | - | chr4_4:47607916-47607935 | None:intergenic | 45.0% | |
!! | ATGGAAGCGCTTGCAATAGT+CGG | - | chr4_4:47607965-47607984 | None:intergenic | 45.0% |
ATGCCATACCATCGCGTTAT+TGG | + | chr4_4:47608001-47608020 | Msa0684300:CDS | 45.0% | |
TGCCATACCATCGCGTTATT+GGG | + | chr4_4:47608002-47608021 | Msa0684300:CDS | 45.0% | |
TTCCCAATAACGCGATGGTA+TGG | - | chr4_4:47608007-47608026 | None:intergenic | 45.0% | |
AATACAGGATGCTGATGGAG+AGG | + | chr4_4:47608304-47608323 | Msa0684300:CDS | 45.0% | |
ATACAGGATGCTGATGGAGA+GGG | + | chr4_4:47608305-47608324 | Msa0684300:CDS | 45.0% | |
! | CTGATGGAGAGGGAAAGTAT+CGG | + | chr4_4:47608315-47608334 | Msa0684300:CDS | 45.0% |
CGAGACATATAAACAGTGGC+AGG | + | chr4_4:47608392-47608411 | Msa0684300:CDS | 45.0% | |
CAGGTTAGGAATACAAGAGC+TGG | + | chr4_4:47608411-47608430 | Msa0684300:CDS | 45.0% | |
TGGATGCTTCAAGGTTGGAA+AGG | + | chr4_4:47608534-47608553 | Msa0684300:CDS | 45.0% | |
GTGGATCATAGAACGGTCTC+TGG | - | chr4_4:47606715-47606734 | None:intergenic | 50.0% | |
!! | GGGTGTTGATTAGGGGAAAG+AGG | - | chr4_4:47606794-47606813 | None:intergenic | 50.0% |
CAATAGCAATAGCAGCGTCG+AGG | + | chr4_4:47606856-47606875 | Msa0684300:CDS | 50.0% | |
!! | ACAGGGGTATCAGGTGAAAG+GGG | - | chr4_4:47606899-47606918 | None:intergenic | 50.0% |
GAGGAGTCACCTCCATCAAA+TGG | + | chr4_4:47607388-47607407 | Msa0684300:CDS | 50.0% | |
GAGTCACCTCCATCAAATGG+AGG | + | chr4_4:47607391-47607410 | Msa0684300:CDS | 50.0% | |
GTCTTCCCTCCATTTGATGG+AGG | - | chr4_4:47607400-47607419 | None:intergenic | 50.0% | |
CGAGTCTTCCCTCCATTTGA+TGG | - | chr4_4:47607403-47607422 | None:intergenic | 50.0% | |
AGGCAACATTCTTCACCCTC+TGG | + | chr4_4:47607541-47607560 | Msa0684300:CDS | 50.0% | |
GGCAACATTCTTCACCCTCT+GGG | + | chr4_4:47607542-47607561 | Msa0684300:CDS | 50.0% | |
GCAACATTCTTCACCCTCTG+GGG | + | chr4_4:47607543-47607562 | Msa0684300:CDS | 50.0% | |
!! | TCTTGGTGTTCGGAGAGGAA+TGG | - | chr4_4:47607651-47607670 | None:intergenic | 50.0% |
ATTCCTCTCCGAACACCAAG+AGG | + | chr4_4:47607650-47607669 | Msa0684300:CDS | 50.0% | |
CTCAGCAGTAGAGATCCTCT+TGG | - | chr4_4:47607668-47607687 | None:intergenic | 50.0% | |
CCTCCAAACCTGAAGATCAC+CGG | + | chr4_4:47607874-47607893 | Msa0684300:CDS | 50.0% | |
CTCCAAACCTGAAGATCACC+GGG | + | chr4_4:47607875-47607894 | Msa0684300:CDS | 50.0% | |
! | ATCCCGGTGATCTTCAGGTT+TGG | - | chr4_4:47607880-47607899 | None:intergenic | 50.0% |
ACTCTATCCCGGTGATCTTC+AGG | - | chr4_4:47607885-47607904 | None:intergenic | 50.0% | |
GGGATAGAGTTCCCTTTACC+TGG | + | chr4_4:47607895-47607914 | Msa0684300:CDS | 50.0% | |
CTTTGCTACACGGTTTAGGG+AGG | + | chr4_4:47608221-47608240 | Msa0684300:CDS | 50.0% | |
GGCCCGAGACATATAAACAG+TGG | + | chr4_4:47608388-47608407 | Msa0684300:CDS | 50.0% | |
TTATGCTGGCACCCAACATG+TGG | - | chr4_4:47608577-47608596 | None:intergenic | 50.0% | |
GTGGATCATAGAACGGTCTC+TGG | - | chr4_4:47606715-47606734 | None:intergenic | 50.0% | |
!! | GGGTGTTGATTAGGGGAAAG+AGG | - | chr4_4:47606794-47606813 | None:intergenic | 50.0% |
CAATAGCAATAGCAGCGTCG+AGG | + | chr4_4:47606856-47606875 | Msa0684300:CDS | 50.0% | |
!! | ACAGGGGTATCAGGTGAAAG+GGG | - | chr4_4:47606899-47606918 | None:intergenic | 50.0% |
GAGGAGTCACCTCCATCAAA+TGG | + | chr4_4:47607388-47607407 | Msa0684300:CDS | 50.0% | |
GAGTCACCTCCATCAAATGG+AGG | + | chr4_4:47607391-47607410 | Msa0684300:CDS | 50.0% | |
GTCTTCCCTCCATTTGATGG+AGG | - | chr4_4:47607400-47607419 | None:intergenic | 50.0% | |
CGAGTCTTCCCTCCATTTGA+TGG | - | chr4_4:47607403-47607422 | None:intergenic | 50.0% | |
AGGCAACATTCTTCACCCTC+TGG | + | chr4_4:47607541-47607560 | Msa0684300:CDS | 50.0% | |
GGCAACATTCTTCACCCTCT+GGG | + | chr4_4:47607542-47607561 | Msa0684300:CDS | 50.0% | |
GCAACATTCTTCACCCTCTG+GGG | + | chr4_4:47607543-47607562 | Msa0684300:CDS | 50.0% | |
!! | TCTTGGTGTTCGGAGAGGAA+TGG | - | chr4_4:47607651-47607670 | None:intergenic | 50.0% |
ATTCCTCTCCGAACACCAAG+AGG | + | chr4_4:47607650-47607669 | Msa0684300:CDS | 50.0% | |
CTCAGCAGTAGAGATCCTCT+TGG | - | chr4_4:47607668-47607687 | None:intergenic | 50.0% | |
CCTCCAAACCTGAAGATCAC+CGG | + | chr4_4:47607874-47607893 | Msa0684300:CDS | 50.0% | |
CTCCAAACCTGAAGATCACC+GGG | + | chr4_4:47607875-47607894 | Msa0684300:CDS | 50.0% | |
! | ATCCCGGTGATCTTCAGGTT+TGG | - | chr4_4:47607880-47607899 | None:intergenic | 50.0% |
ACTCTATCCCGGTGATCTTC+AGG | - | chr4_4:47607885-47607904 | None:intergenic | 50.0% | |
GGGATAGAGTTCCCTTTACC+TGG | + | chr4_4:47607895-47607914 | Msa0684300:CDS | 50.0% | |
CTTTGCTACACGGTTTAGGG+AGG | + | chr4_4:47608221-47608240 | Msa0684300:CDS | 50.0% | |
GGCCCGAGACATATAAACAG+TGG | + | chr4_4:47608388-47608407 | Msa0684300:CDS | 50.0% | |
TTATGCTGGCACCCAACATG+TGG | - | chr4_4:47608577-47608596 | None:intergenic | 50.0% | |
CCAGTCAAGAGTTGAGGCTG+CGG | - | chr4_4:47607112-47607131 | None:intergenic | 55.0% | |
! | CATTCTTCACCCTCTGGGGA+TGG | + | chr4_4:47607547-47607566 | Msa0684300:CDS | 55.0% |
CTTTGTGGTCCATCCCCAGA+GGG | - | chr4_4:47607559-47607578 | None:intergenic | 55.0% | |
TGGGGATGGACCACAAAGGT+TGG | + | chr4_4:47607561-47607580 | Msa0684300:CDS | 55.0% | |
!! | GATCCTCTTGGTGTTCGGAG+AGG | - | chr4_4:47607656-47607675 | None:intergenic | 55.0% |
! | CCGGTGATCTTCAGGTTTGG+AGG | - | chr4_4:47607877-47607896 | None:intergenic | 55.0% |
CCAGTCAAGAGTTGAGGCTG+CGG | - | chr4_4:47607112-47607131 | None:intergenic | 55.0% | |
! | CATTCTTCACCCTCTGGGGA+TGG | + | chr4_4:47607547-47607566 | Msa0684300:CDS | 55.0% |
CTTTGTGGTCCATCCCCAGA+GGG | - | chr4_4:47607559-47607578 | None:intergenic | 55.0% | |
TGGGGATGGACCACAAAGGT+TGG | + | chr4_4:47607561-47607580 | Msa0684300:CDS | 55.0% | |
!! | GATCCTCTTGGTGTTCGGAG+AGG | - | chr4_4:47607656-47607675 | None:intergenic | 55.0% |
! | CCGGTGATCTTCAGGTTTGG+AGG | - | chr4_4:47607877-47607896 | None:intergenic | 55.0% |
GTCAAGAGTTGAGGCTGCGG+AGG | - | chr4_4:47607109-47607128 | None:intergenic | 60.0% | |
CCGCAGCCTCAACTCTTGAC+TGG | + | chr4_4:47607109-47607128 | Msa0684300:CDS | 60.0% | |
CCTTTGTGGTCCATCCCCAG+AGG | - | chr4_4:47607560-47607579 | None:intergenic | 60.0% | |
! | CCTCTGGGGATGGACCACAA+AGG | + | chr4_4:47607557-47607576 | Msa0684300:CDS | 60.0% |
AAGGCGTGCCTCAAGGCCAT+TGG | - | chr4_4:47607599-47607618 | None:intergenic | 60.0% | |
CTCCAGTACCATCGCCGACA+AGG | - | chr4_4:47607618-47607637 | None:intergenic | 60.0% | |
GTCAAGAGTTGAGGCTGCGG+AGG | - | chr4_4:47607109-47607128 | None:intergenic | 60.0% | |
CCGCAGCCTCAACTCTTGAC+TGG | + | chr4_4:47607109-47607128 | Msa0684300:CDS | 60.0% | |
CCTTTGTGGTCCATCCCCAG+AGG | - | chr4_4:47607560-47607579 | None:intergenic | 60.0% | |
! | CCTCTGGGGATGGACCACAA+AGG | + | chr4_4:47607557-47607576 | Msa0684300:CDS | 60.0% |
AAGGCGTGCCTCAAGGCCAT+TGG | - | chr4_4:47607599-47607618 | None:intergenic | 60.0% | |
CTCCAGTACCATCGCCGACA+AGG | - | chr4_4:47607618-47607637 | None:intergenic | 60.0% | |
GAGGGAAGGATCCGTCTCCG+AGG | - | chr4_4:47606627-47606646 | None:intergenic | 65.0% | |
GGCCTTGAGGCACGCCTTGT+CGG | + | chr4_4:47607601-47607620 | Msa0684300:CDS | 65.0% | |
CGCCTTGTCGGCGATGGTAC+TGG | + | chr4_4:47607613-47607632 | Msa0684300:CDS | 65.0% | |
GAGGGAAGGATCCGTCTCCG+AGG | - | chr4_4:47606627-47606646 | None:intergenic | 65.0% | |
GGCCTTGAGGCACGCCTTGT+CGG | + | chr4_4:47607601-47607620 | Msa0684300:CDS | 65.0% | |
CGCCTTGTCGGCGATGGTAC+TGG | + | chr4_4:47607613-47607632 | Msa0684300:CDS | 65.0% | |
CGCCGACAAGGCGTGCCTCA+AGG | - | chr4_4:47607606-47607625 | None:intergenic | 70.0% | |
GAGGCACGCCTTGTCGGCGA+TGG | + | chr4_4:47607607-47607626 | Msa0684300:CDS | 70.0% | |
CGCCGACAAGGCGTGCCTCA+AGG | - | chr4_4:47607606-47607625 | None:intergenic | 70.0% | |
GAGGCACGCCTTGTCGGCGA+TGG | + | chr4_4:47607607-47607626 | Msa0684300:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 47606620 | 47608596 | 47606620 | ID=Msa0684300;Name=Msa0684300 |
chr4_4 | mRNA | 47606620 | 47608596 | 47606620 | ID=Msa0684300-mRNA-1;Parent=Msa0684300;Name=Msa0684300-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|658 |
chr4_4 | exon | 47606620 | 47608596 | 47606620 | ID=Msa0684300-mRNA-1:exon:11769;Parent=Msa0684300-mRNA-1 |
chr4_4 | CDS | 47606620 | 47608596 | 47606620 | ID=Msa0684300-mRNA-1:cds;Parent=Msa0684300-mRNA-1 |
Gene Sequence |
Protein sequence |