AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0603640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0603640 MtrunA17_Chr4g0032331 94.505 455 23 2 1 454 1 454 0.0 876
Msa0603640 MtrunA17_Chr3g0112771 44.956 456 241 5 2 453 6 455 1.29e-137 403
Msa0603640 MtrunA17_Chr3g0112761 47.059 459 229 7 1 452 1 452 1.76e-131 387
Msa0603640 MtrunA17_Chr4g0050341 35.220 477 269 12 5 446 16 487 1.18e-87 276
Msa0603640 MtrunA17_Chr3g0092641 34.576 483 270 15 3 450 7 478 6.26e-82 261
Msa0603640 MtrunA17_Chr5g0426431 34.576 483 270 13 3 450 7 478 1.66e-81 259
Msa0603640 MtrunA17_Chr2g0278711 34.583 480 273 14 3 450 7 477 1.04e-77 249
Msa0603640 MtrunA17_Chr6g0454401 33.264 478 274 12 10 450 12 481 1.20e-77 249
Msa0603640 MtrunA17_Chr6g0454331 32.842 475 279 11 3 443 2 470 4.05e-77 248
Msa0603640 MtrunA17_Chr6g0454191 32.773 476 279 12 10 450 12 481 4.70e-77 248
Msa0603640 MtrunA17_Chr3g0118671 33.054 478 280 10 10 454 8 478 5.19e-77 248
Msa0603640 MtrunA17_Chr3g0118711 33.058 484 284 12 3 453 8 484 5.20e-77 248
Msa0603640 MtrunA17_Chr3g0118701 32.645 484 286 11 4 454 11 487 6.70e-77 248
Msa0603640 MtrunA17_Chr6g0454301 31.992 472 285 10 10 450 265 731 2.22e-76 253
Msa0603640 MtrunA17_Chr6g0454301 34.545 220 135 2 230 443 5 221 2.43e-42 159
Msa0603640 MtrunA17_Chr5g0412111 35.010 477 256 16 10 451 6 463 2.01e-75 243
Msa0603640 MtrunA17_Chr8g0359821 32.505 483 282 13 3 450 5 478 3.63e-75 243
Msa0603640 MtrunA17_Chr6g0454291 34.244 476 269 11 3 443 2 468 4.39e-75 243
Msa0603640 MtrunA17_Chr6g0453961 32.680 459 272 10 3 429 14 467 9.22e-75 242
Msa0603640 MtrunA17_Chr3g0078841 32.203 472 278 11 5 443 7 469 1.70e-74 241
Msa0603640 MtrunA17_Chr3g0118771 31.743 482 289 10 6 454 19 493 3.44e-73 238
Msa0603640 MtrunA17_Chr7g0217881 32.618 466 274 11 10 450 12 462 4.18e-73 237
Msa0603640 MtrunA17_Chr3g0118691 32.359 479 286 10 4 450 11 483 5.97e-73 238
Msa0603640 MtrunA17_Chr6g0454341 30.786 471 284 12 6 443 8 469 1.17e-72 236
Msa0603640 MtrunA17_Chr6g0454131 32.848 481 284 14 3 450 5 479 1.47e-72 236
Msa0603640 MtrunA17_Chr6g0453951 32.211 475 282 11 10 450 59 527 1.84e-72 238
Msa0603640 MtrunA17_Chr6g0454321 31.637 452 273 10 6 427 8 453 4.93e-72 239
Msa0603640 MtrunA17_Chr6g0454201 34.681 470 262 13 10 443 12 472 1.60e-71 234
Msa0603640 MtrunA17_Chr6g0454261 31.435 474 283 12 4 443 6 471 1.67e-71 234
Msa0603640 MtrunA17_Chr5g0412131 35.158 475 259 14 10 451 13 471 3.81e-71 232
Msa0603640 MtrunA17_Chr5g0412101 33.607 488 271 15 1 451 1 472 9.33e-71 231
Msa0603640 MtrunA17_Chr6g0454141 30.932 472 290 11 3 443 5 471 1.43e-70 231
Msa0603640 MtrunA17_Chr3g0118661 31.789 475 283 9 6 447 11 477 3.00e-70 230
Msa0603640 MtrunA17_Chr6g0452771 32.068 474 268 13 10 443 12 471 4.72e-70 230
Msa0603640 MtrunA17_Chr6g0454181 31.624 468 278 11 10 443 12 471 5.62e-69 227
Msa0603640 MtrunA17_Chr6g0454361 32.553 470 271 10 10 443 13 472 1.80e-68 226
Msa0603640 MtrunA17_Chr6g0454151 31.546 485 288 13 4 453 6 481 4.34e-68 224
Msa0603640 MtrunA17_Chr5g0423981 31.746 441 250 10 10 429 12 422 6.91e-68 223
Msa0603640 MtrunA17_Chr6g0454211 33.474 475 274 11 3 443 292 758 1.00e-67 230
Msa0603640 MtrunA17_Chr6g0454211 31.365 271 132 9 118 369 1 236 1.72e-29 122
Msa0603640 MtrunA17_Chr6g0454121 31.809 481 289 12 3 450 5 479 1.24e-67 223
Msa0603640 MtrunA17_Chr8g0336331 30.172 464 287 10 10 443 12 468 1.78e-67 223
Msa0603640 MtrunA17_Chr6g0454351 31.513 476 262 13 10 449 14 461 1.45e-64 215
Msa0603640 MtrunA17_Chr3g0118751 30.705 482 265 13 6 454 4 449 1.64e-62 209
Msa0603640 MtrunA17_Chr5g0414321 32.484 471 264 18 10 453 12 455 3.24e-60 203
Msa0603640 MtrunA17_Chr5g0414331 33.120 468 267 17 10 454 14 458 6.37e-60 202
Msa0603640 MtrunA17_Chr7g0250001 32.088 455 262 17 7 438 6 436 1.28e-58 199
Msa0603640 MtrunA17_Chr6g0464881 31.087 460 256 13 1 428 1 431 7.11e-56 192
Msa0603640 MtrunA17_Chr6g0454251 33.924 395 219 10 10 370 9 395 1.13e-55 189
Msa0603640 MtrunA17_Chr7g0249981 29.915 468 280 17 7 452 25 466 2.46e-55 191
Msa0603640 MtrunA17_Chr8g0377921 30.435 483 278 17 7 451 3 465 3.87e-55 190
Msa0603640 MtrunA17_Chr3g0121991 33.686 472 258 22 7 438 78 534 1.01e-54 191
Msa0603640 MtrunA17_Chr6g0464921 30.947 475 260 16 1 438 1 444 2.97e-54 187
Msa0603640 MtrunA17_Chr3g0118721 37.586 290 164 7 175 450 4 290 3.60e-54 182
Msa0603640 MtrunA17_Chr3g0122001 32.874 435 240 13 7 408 5 420 6.75e-54 194
Msa0603640 MtrunA17_Chr3g0122001 31.546 485 273 17 7 449 485 952 2.80e-53 192
Msa0603640 MtrunA17_Chr5g0426401 33.758 314 186 8 154 453 9 314 7.60e-54 182
Msa0603640 MtrunA17_Chr8g0361371 31.340 485 276 19 1 446 1 467 2.18e-53 186
Msa0603640 MtrunA17_Chr8g0365811 29.388 490 281 14 3 449 490 957 2.90e-53 192
Msa0603640 MtrunA17_Chr8g0365811 30.804 448 263 14 9 421 10 445 2.25e-51 186
Msa0603640 MtrunA17_Chr8g0377941 30.870 460 251 15 7 427 6 437 3.55e-53 185
Msa0603640 MtrunA17_Chr1g0207931 29.237 472 252 13 1 449 85 497 5.80e-53 185
Msa0603640 MtrunA17_Chr1g0207861 30.561 481 289 14 1 449 1 468 6.06e-53 184
Msa0603640 MtrunA17_Chr1g0207981 28.898 481 296 13 2 450 7 473 1.22e-52 184
Msa0603640 MtrunA17_Chr8g0380531 31.116 466 273 17 8 446 10 454 1.75e-52 183
Msa0603640 MtrunA17_Chr6g0454221 40.090 222 123 3 229 443 4 222 1.77e-52 178
Msa0603640 MtrunA17_Chr4g0044511 29.253 482 268 16 18 451 50 506 2.10e-52 184
Msa0603640 MtrunA17_Chr6g0454271 35.125 279 167 5 175 443 4 278 2.56e-52 177
Msa0603640 MtrunA17_Chr5g0431441 30.021 473 275 15 9 450 19 466 2.74e-52 182
Msa0603640 MtrunA17_Chr1g0161351 29.707 478 295 12 2 449 31 497 3.74e-52 183
Msa0603640 MtrunA17_Chr1g0207971 29.263 475 288 17 1 449 1 453 4.90e-52 182
Msa0603640 MtrunA17_Chr5g0401721 30.470 489 283 17 1 450 1 471 6.00e-52 182
Msa0603640 MtrunA17_Chr7g0232391 41.313 259 132 7 205 446 207 462 8.66e-52 181
Msa0603640 MtrunA17_Chr4g0053501 30.103 485 285 15 2 453 5 468 1.11e-51 182
Msa0603640 MtrunA17_Chr8g0355011 30.595 353 199 6 109 452 46 361 2.00e-51 177
Msa0603640 MtrunA17_Chr7g0218791 29.792 433 261 14 15 426 12 422 3.62e-51 179
Msa0603640 MtrunA17_Chr3g0098111 29.474 475 288 13 8 449 9 469 3.94e-51 180
Msa0603640 MtrunA17_Chr7g0249931 32.719 434 254 16 1 416 34 447 4.48e-51 180
Msa0603640 MtrunA17_Chr1g0207951 31.303 476 270 16 8 449 656 1108 1.31e-50 184
Msa0603640 MtrunA17_Chr1g0207951 29.526 464 286 15 9 449 125 570 1.31e-48 179
Msa0603640 MtrunA17_Chr6g0486251 30.561 481 279 17 1 446 1 461 3.72e-50 177
Msa0603640 MtrunA17_Chr6g0486201 30.561 481 279 17 1 446 1 461 3.72e-50 177
Msa0603640 MtrunA17_Chr6g0459311 30.193 467 285 15 9 446 14 468 5.69e-50 176
Msa0603640 MtrunA17_Chr7g0232411 31.423 471 255 17 28 446 8 462 1.52e-49 175
Msa0603640 MtrunA17_Chr8g0347281 30.266 489 270 18 1 442 1 465 3.41e-49 174
Msa0603640 MtrunA17_Chr8g0366391 29.109 505 282 21 1 453 1 481 3.91e-49 174
Msa0603640 MtrunA17_Chr2g0329111 30.380 474 284 15 6 444 4 466 1.08e-48 173
Msa0603640 MtrunA17_Chr4g0053321 29.412 493 266 16 8 453 26 483 1.13e-48 174
Msa0603640 MtrunA17_Chr8g0347271 30.323 465 276 15 9 442 19 466 1.78e-48 172
Msa0603640 MtrunA17_Chr6g0454171 32.523 329 177 9 125 443 8 301 7.38e-48 167
Msa0603640 MtrunA17_Chr7g0218821 28.764 445 267 15 9 427 6 426 7.58e-48 170
Msa0603640 MtrunA17_Chr7g0218831 30.093 432 255 13 8 419 6 410 7.70e-48 170
Msa0603640 MtrunA17_Chr8g0339631 34.722 360 203 13 109 443 110 462 9.29e-48 171
Msa0603640 MtrunA17_Chr7g0232331 29.677 465 272 15 28 446 8 463 9.57e-48 170
Msa0603640 MtrunA17_Chr1g0207831 28.274 481 281 16 8 449 8 463 1.54e-47 170
Msa0603640 MtrunA17_Chr8g0334831 29.960 494 279 21 1 446 1 475 1.74e-47 170
Msa0603640 MtrunA17_Chr7g0232341 35.766 274 153 7 191 446 195 463 1.77e-47 170
Msa0603640 MtrunA17_Chr8g0373301 30.753 478 281 16 2 446 3 463 2.09e-47 169
Msa0603640 MtrunA17_Chr8g0339451 32.316 393 234 9 76 442 70 456 2.98e-47 169
Msa0603640 MtrunA17_Chr4g0044521 29.019 479 270 18 18 453 19 470 3.72e-47 169
Msa0603640 MtrunA17_Chr7g0218811 28.043 460 290 14 8 450 15 450 3.87e-47 168
Msa0603640 MtrunA17_Chr7g0218841 29.567 416 251 13 8 409 6 393 5.41e-47 167
Msa0603640 MtrunA17_Chr5g0401851 29.200 500 296 17 1 454 1 488 1.69e-46 167
Msa0603640 MtrunA17_Chr7g0265151 28.687 495 297 17 1 450 1 484 1.75e-46 167
Msa0603640 MtrunA17_Chr8g0339601 35.738 305 160 9 152 436 27 315 2.10e-46 163
Msa0603640 MtrunA17_Chr1g0153451 30.159 441 250 12 52 446 32 460 2.51e-46 166
Msa0603640 MtrunA17_Chr6g0463851 28.717 491 290 18 1 446 4 479 3.29e-46 167
Msa0603640 MtrunA17_Chr4g0066201 29.522 481 270 19 8 446 18 471 8.78e-46 165
Msa0603640 MtrunA17_Chr8g0335161 32.234 394 231 11 81 445 76 462 1.51e-45 164
Msa0603640 MtrunA17_Chr4g0066261 30.020 493 265 22 7 446 13 478 1.65e-45 165
Msa0603640 MtrunA17_Chr4g0066221 27.959 490 293 15 1 446 4 477 2.38e-45 164
Msa0603640 MtrunA17_Chr6g0464841 31.027 448 263 18 1 427 1 423 2.95e-45 163
Msa0603640 MtrunA17_Chr6g0464861 30.045 446 269 16 1 427 1 422 4.19e-45 163
Msa0603640 MtrunA17_Chr6g0463861 28.631 482 290 16 7 452 13 476 5.89e-45 163
Msa0603640 MtrunA17_Chr5g0440421 29.505 505 291 17 2 452 3 496 8.09e-45 163
Msa0603640 MtrunA17_Chr5g0442561 28.782 476 303 15 6 450 3 473 8.98e-45 162
Msa0603640 MtrunA17_Chr6g0462531 29.747 474 281 19 10 447 5 462 9.29e-45 162
Msa0603640 MtrunA17_Chr8g0335141 39.382 259 132 7 205 445 213 464 1.03e-44 162
Msa0603640 MtrunA17_Chr6g0464871 30.425 447 267 17 1 427 13 435 1.48e-44 162
Msa0603640 MtrunA17_Chr8g0339461 33.867 375 189 15 109 443 110 465 3.15e-44 161
Msa0603640 MtrunA17_Chr6g0449931 29.485 485 264 19 1 442 1 450 3.14e-43 158
Msa0603640 MtrunA17_Chr7g0232401 30.959 365 229 9 97 442 100 460 3.29e-43 158
Msa0603640 MtrunA17_Chr4g0066131 28.211 475 283 20 18 453 23 478 6.15e-43 157
Msa0603640 MtrunA17_Chr6g0462541 31.928 332 200 8 112 427 118 439 6.42e-43 157
Msa0603640 MtrunA17_Chr8g0339441 44.175 206 96 5 256 442 217 422 1.61e-42 155
Msa0603640 MtrunA17_Chr4g0066151 27.778 468 280 21 18 446 28 476 1.80e-42 156
Msa0603640 MtrunA17_Chr4g0014061 26.681 476 295 15 17 454 18 477 2.76e-42 156
Msa0603640 MtrunA17_Chr5g0419771 29.323 399 250 11 18 392 46 436 2.79e-42 156
Msa0603640 MtrunA17_Chr5g0448551 29.083 447 268 15 9 432 8 428 3.09e-42 155
Msa0603640 MtrunA17_Chr8g0370941 28.261 506 288 19 1 449 1 488 3.37e-42 156
Msa0603640 MtrunA17_Chr4g0066281 26.667 480 283 17 8 446 12 463 3.61e-42 155
Msa0603640 MtrunA17_Chr7g0243681 27.565 497 297 19 1 452 1 479 3.77e-42 155
Msa0603640 MtrunA17_Chr7g0275511 28.953 449 278 14 9 428 16 452 4.55e-42 155
Msa0603640 MtrunA17_Chr7g0265141 28.279 488 291 18 1 441 1 476 1.26e-41 154
Msa0603640 MtrunA17_Chr5g0419761 27.696 473 281 17 1 426 1 459 1.63e-41 154
Msa0603640 MtrunA17_Chr1g0159551 27.682 466 279 17 15 449 21 459 1.94e-41 153
Msa0603640 MtrunA17_Chr1g0173121 27.907 473 284 18 9 449 15 462 1.96e-41 153
Msa0603640 MtrunA17_Chr5g0428081 29.116 498 288 17 1 452 4 482 2.04e-41 154
Msa0603640 MtrunA17_Chr5g0448521 26.775 493 284 15 8 451 5 469 2.66e-41 153
Msa0603640 MtrunA17_Chr8g0336731 32.203 354 207 10 118 446 142 487 2.71e-41 153
Msa0603640 MtrunA17_Chr5g0420801 29.339 484 288 19 3 454 2 463 5.83e-41 152
Msa0603640 MtrunA17_Chr5g0393591 25.322 466 275 11 9 449 18 435 6.04e-41 152
Msa0603640 MtrunA17_Chr5g0431361 27.455 448 280 10 15 440 19 443 6.46e-41 151
Msa0603640 MtrunA17_Chr6g0462521 27.079 469 286 16 10 447 5 448 1.08e-40 151
Msa0603640 MtrunA17_Chr8g0334861 31.222 442 244 19 52 446 32 460 1.35e-40 151
Msa0603640 MtrunA17_Chr8g0336691 28.070 456 277 12 34 445 927 1375 1.44e-40 155
Msa0603640 MtrunA17_Chr8g0336691 32.877 365 206 11 109 445 116 469 4.86e-40 154
Msa0603640 MtrunA17_Chr8g0336691 27.778 450 266 13 19 443 491 906 2.80e-35 139
Msa0603640 MtrunA17_Chr4g0072771 27.097 465 294 13 9 451 26 467 1.74e-40 150
Msa0603640 MtrunA17_Chr7g0232311 32.571 350 196 12 124 446 124 460 2.14e-40 150
Msa0603640 MtrunA17_Chr4g0072761 27.901 405 251 10 53 443 67 444 3.08e-40 150
Msa0603640 MtrunA17_Chr7g0243631 26.747 501 303 16 1 452 1 486 3.14e-40 150
Msa0603640 MtrunA17_Chr7g0275681 28.211 475 286 17 17 450 21 481 3.67e-40 150
Msa0603640 MtrunA17_Chr8g0369341 29.583 480 289 19 10 454 8 473 5.21e-40 149
Msa0603640 MtrunA17_Chr8g0336651 28.692 474 261 15 19 443 792 1237 8.34e-40 153
Msa0603640 MtrunA17_Chr8g0336651 32.121 330 193 9 121 427 119 440 5.91e-38 147
Msa0603640 MtrunA17_Chr8g0336651 34.091 264 137 8 191 445 535 770 9.29e-33 132
Msa0603640 MtrunA17_Chr7g0243951 26.722 479 277 17 1 426 1 458 8.61e-40 149
Msa0603640 MtrunA17_Chr7g0243931 26.419 511 290 18 1 452 7 490 9.14e-40 149
Msa0603640 MtrunA17_Chr7g0265041 27.010 485 288 18 9 443 12 480 1.80e-39 148
Msa0603640 MtrunA17_Chr5g0442581 28.283 396 240 12 88 450 93 477 2.05e-39 149
Msa0603640 MtrunA17_Chr4g0044501 26.884 491 307 16 1 452 1 478 2.20e-39 148
Msa0603640 MtrunA17_Chr5g0442541 27.743 483 292 16 6 450 3 466 2.26e-39 147
Msa0603640 MtrunA17_Chr6g0462571 29.573 328 205 8 117 427 119 437 2.61e-39 147
Msa0603640 MtrunA17_Chr2g0294931 28.632 475 276 17 18 446 21 478 2.62e-39 148
Msa0603640 MtrunA17_Chr2g0294921 29.253 482 276 18 18 452 170 633 4.65e-39 149
Msa0603640 MtrunA17_Chr6g0462551 29.091 330 214 7 112 427 117 440 5.73e-39 147
Msa0603640 MtrunA17_Chr8g0374901 28.807 486 276 21 7 446 14 475 6.19e-39 147
Msa0603640 MtrunA17_Chr4g0066171 26.639 488 286 19 8 452 21 479 1.60e-38 145
Msa0603640 MtrunA17_Chr7g0243781 27.778 486 309 16 1 452 1 478 2.05e-38 145
Msa0603640 MtrunA17_Chr8g0382021 30.435 368 216 13 82 430 121 467 2.06e-38 145
Msa0603640 MtrunA17_Chr8g0336741 31.343 335 205 8 121 435 126 455 2.39e-38 145
Msa0603640 MtrunA17_Chr8g0374941 27.331 472 275 16 7 433 478 926 3.09e-38 148
Msa0603640 MtrunA17_Chr8g0374941 26.458 480 289 19 7 445 13 469 1.16e-36 144
Msa0603640 MtrunA17_Chr8g0374941 27.309 498 270 18 7 446 951 1414 2.07e-36 143
Msa0603640 MtrunA17_Chr4g0011051 27.347 490 272 19 9 438 10 475 3.36e-38 145
Msa0603640 MtrunA17_Chr6g0454371 39.130 161 95 1 283 443 5 162 6.12e-38 136
Msa0603640 MtrunA17_Chr5g0403641 27.708 480 282 17 1 447 53 500 6.89e-38 144
Msa0603640 MtrunA17_Chr8g0374931 28.481 474 288 15 1 435 4 465 8.10e-38 144
Msa0603640 MtrunA17_Chr7g0243871 27.183 504 290 17 1 454 1 477 9.17e-38 143
Msa0603640 MtrunA17_Chr5g0416741 26.059 472 306 14 19 454 24 488 1.09e-37 143
Msa0603640 MtrunA17_Chr2g0302961 27.615 478 295 16 5 447 2 463 2.32e-37 142
Msa0603640 MtrunA17_Chr7g0249961 36.232 207 113 4 232 427 37 235 2.41e-37 137
Msa0603640 MtrunA17_Chr6g0463891 26.176 489 317 14 2 452 5 487 2.94e-37 142
Msa0603640 MtrunA17_Chr2g0294941 30.252 357 207 11 111 435 17 363 3.18e-37 140
Msa0603640 MtrunA17_Chr5g0442491 26.915 483 305 13 6 450 3 475 5.70e-37 141
Msa0603640 MtrunA17_Chr4g0044481 26.196 397 237 10 17 392 36 397 7.02e-37 140
Msa0603640 MtrunA17_Chr5g0442521 27.642 492 293 16 6 451 3 477 7.49e-37 140
Msa0603640 MtrunA17_Chr7g0265101 26.016 492 306 16 9 453 10 490 1.20e-36 140
Msa0603640 MtrunA17_Chr2g0302991 28.958 480 283 20 5 447 2 460 1.24e-36 140
Msa0603640 MtrunA17_Chr7g0265111 27.236 492 288 16 11 451 45 517 1.52e-36 141
Msa0603640 MtrunA17_Chr1g0179901 24.948 481 289 15 18 445 26 487 1.68e-36 140
Msa0603640 MtrunA17_Chr7g0265051 26.585 489 305 16 9 453 10 488 3.16e-36 139
Msa0603640 MtrunA17_Chr8g0334851 28.482 481 278 18 1 438 1 458 3.35e-36 139
Msa0603640 MtrunA17_Chr8g0374971 27.475 495 269 19 9 446 16 477 3.67e-36 139
Msa0603640 MtrunA17_Chr3g0079731 28.081 495 277 18 9 447 7 478 5.99e-36 138
Msa0603640 MtrunA17_Chr7g0243771 27.767 497 292 20 1 452 1 475 8.14e-36 138
Msa0603640 MtrunA17_Chr3g0106231 26.170 470 282 17 10 450 19 452 8.52e-36 138
Msa0603640 MtrunA17_Chr5g0442601 28.686 373 229 10 109 451 512 877 9.50e-36 140
Msa0603640 MtrunA17_Chr5g0442601 28.707 317 187 9 90 392 42 333 8.18e-29 120
Msa0603640 MtrunA17_Chr5g0442511 27.463 477 283 15 6 449 47 493 1.66e-35 137
Msa0603640 MtrunA17_Chr7g0243801 27.767 497 293 20 1 452 1 476 1.89e-35 137
Msa0603640 MtrunA17_Chr5g0429711 26.195 481 294 16 8 453 11 465 2.26e-35 136
Msa0603640 MtrunA17_Chr7g0235051 25.910 467 266 16 1 426 1 428 1.13e-34 134
Msa0603640 MtrunA17_Chr1g0153461 40.642 187 97 3 256 428 3 189 1.23e-34 129
Msa0603640 MtrunA17_Chr5g0410941 28.632 475 278 19 18 449 33 489 1.29e-34 135
Msa0603640 MtrunA17_Chr4g0042891 30.595 353 201 14 117 440 118 455 2.52e-34 134
Msa0603640 MtrunA17_Chr7g0243861 27.600 500 279 20 9 452 15 487 7.95e-34 132
Msa0603640 MtrunA17_Chr4g0060511 26.981 467 276 18 9 426 12 462 1.07e-33 132
Msa0603640 MtrunA17_Chr7g0218311 29.014 355 219 11 111 438 124 472 1.17e-33 132
Msa0603640 MtrunA17_Chr8g0350881 27.766 479 290 16 10 446 13 477 1.21e-33 132
Msa0603640 MtrunA17_Chr4g0042931 27.313 454 255 15 18 427 17 439 3.11e-33 130
Msa0603640 MtrunA17_Chr5g0429681 26.411 496 291 22 2 453 38 503 3.89e-33 130
Msa0603640 MtrunA17_Chr7g0232351 39.773 176 91 5 205 369 207 378 4.64e-33 128
Msa0603640 MtrunA17_Chr5g0431371 30.526 285 173 5 169 440 166 438 1.08e-32 129
Msa0603640 MtrunA17_Chr5g0431401 31.395 258 153 5 206 451 205 450 1.18e-32 129
Msa0603640 MtrunA17_Chr8g0336261 40.000 135 78 1 283 417 5 136 1.56e-32 120
Msa0603640 MtrunA17_Chr5g0432731 30.534 262 153 8 206 452 52 299 2.25e-32 125
Msa0603640 MtrunA17_Chr5g0431421 31.395 258 153 5 206 451 205 450 2.48e-32 127
Msa0603640 MtrunA17_Chr7g0243851 32.847 274 152 9 205 452 175 442 4.26e-32 127
Msa0603640 MtrunA17_Chr7g0243711 36.486 222 116 8 250 452 101 316 9.18e-32 124
Msa0603640 MtrunA17_Chr7g0243761 25.272 459 281 16 1 417 1 439 1.48e-31 125
Msa0603640 MtrunA17_Chr3g0106251 27.875 287 184 5 167 443 12 285 2.16e-31 122
Msa0603640 MtrunA17_Chr7g0241781 26.872 454 264 20 1 431 1 409 1.77e-30 122
Msa0603640 MtrunA17_Chr5g0409591 29.831 295 169 7 184 449 196 481 2.87e-30 122
Msa0603640 MtrunA17_Chr7g0243611 33.333 210 129 5 191 392 65 271 8.24e-30 117
Msa0603640 MtrunA17_Chr1g0165701 27.778 378 224 15 112 454 125 488 9.18e-30 121
Msa0603640 MtrunA17_Chr8g0355221 26.596 376 234 11 112 454 125 491 2.08e-29 120
Msa0603640 MtrunA17_Chr1g0207881 25.771 454 240 15 1 438 1 373 2.91e-29 118
Msa0603640 MtrunA17_Chr5g0416821 24.948 481 307 17 8 452 14 476 3.94e-29 119
Msa0603640 MtrunA17_Chr7g0241801 26.991 452 266 21 1 431 1 409 8.25e-29 117
Msa0603640 MtrunA17_Chr2g0307961 27.004 474 280 18 7 440 11 458 5.27e-28 115
Msa0603640 MtrunA17_Chr7g0243911 37.696 191 101 6 252 426 17 205 7.24e-28 110
Msa0603640 MtrunA17_Chr8g0361411 27.254 477 291 18 1 447 1 451 7.80e-28 115
Msa0603640 MtrunA17_Chr7g0243811 34.043 188 118 4 205 390 190 373 6.85e-27 111
Msa0603640 MtrunA17_Chr6g0454231 29.004 231 116 5 205 429 7 195 2.25e-26 111
Msa0603640 MtrunA17_Chr6g0454231 30.688 189 112 4 10 180 252 439 1.19e-16 82.0
Msa0603640 MtrunA17_Chr6g0466831 24.083 436 280 13 18 426 28 439 2.59e-26 110
Msa0603640 MtrunA17_Chr4g0069611 25.336 446 262 18 18 426 25 436 2.75e-26 110
Msa0603640 MtrunA17_Chr5g0431431 27.308 260 170 6 169 424 116 360 4.48e-26 108
Msa0603640 MtrunA17_Chr6g0466841 23.918 439 277 14 18 426 28 439 8.41e-26 109
Msa0603640 MtrunA17_Chr7g0231631 28.736 261 170 7 205 454 9 264 5.70e-25 103
Msa0603640 MtrunA17_Chr4g0039881 25.740 439 271 15 18 427 2 414 9.43e-25 106
Msa0603640 MtrunA17_Chr6g0482061 30.000 240 141 8 205 426 224 454 2.24e-24 105
Msa0603640 MtrunA17_Chr8g0367221 24.890 454 266 17 18 427 1298 1720 2.67e-24 106
Msa0603640 MtrunA17_Chr8g0367221 24.889 450 271 17 18 427 808 1230 5.65e-23 102
Msa0603640 MtrunA17_Chr8g0367221 24.601 439 285 16 18 427 22 443 1.10e-21 98.6
Msa0603640 MtrunA17_Chr2g0302851 26.174 447 285 13 9 431 17 442 3.43e-24 104
Msa0603640 MtrunA17_Chr2g0278721 26.126 444 266 16 18 426 25 441 5.54e-24 105
Msa0603640 MtrunA17_Chr2g0278721 23.799 458 268 14 18 426 527 952 4.91e-21 96.7
Msa0603640 MtrunA17_Chr3g0079711 36.413 184 98 5 283 447 3 186 3.52e-23 96.7
Msa0603640 MtrunA17_Chr2g0278741 26.897 435 274 16 18 426 107 523 4.02e-23 102
Msa0603640 MtrunA17_Chr8g0337381 46.610 118 55 3 334 445 6 121 8.23e-23 94.0
Msa0603640 MtrunA17_Chr7g0250021 30.247 324 186 14 1 303 6 310 8.57e-23 99.0
Msa0603640 MtrunA17_Chr4g0066141 38.182 165 84 6 305 452 191 354 1.01e-22 99.0
Msa0603640 MtrunA17_Chr6g0453981 31.884 207 121 5 118 305 1 206 5.96e-22 94.4
Msa0603640 MtrunA17_Chr4g0029131 25.397 441 269 16 18 427 22 433 8.46e-22 98.6
Msa0603640 MtrunA17_Chr6g0464091 26.531 441 270 18 18 426 28 446 9.28e-22 97.4
Msa0603640 MtrunA17_Chr8g0336321 29.694 229 144 5 214 431 223 445 1.09e-21 97.4
Msa0603640 MtrunA17_Chr8g0336251 29.694 229 144 5 214 431 223 445 1.09e-21 97.4
Msa0603640 MtrunA17_Chr3g0092031 32.000 175 107 4 258 426 5 173 1.26e-20 89.7
Msa0603640 MtrunA17_Chr8g0357361 29.167 192 127 4 205 392 63 249 4.81e-20 89.7
Msa0603640 MtrunA17_Chr5g0426411 35.429 175 94 6 2 163 6 174 5.12e-20 87.0
Msa0603640 MtrunA17_Chr5g0427571 29.075 227 140 5 214 425 53 273 1.05e-19 89.4
Msa0603640 MtrunA17_Chr1g0196851 23.095 433 271 13 18 417 59 462 5.56e-18 86.3
Msa0603640 MtrunA17_Chr6g0453941 27.987 318 158 11 10 316 13 270 1.20e-17 82.8
Msa0603640 MtrunA17_Chr4g0040691 24.460 417 248 17 18 402 18 399 1.20e-17 85.1
Msa0603640 MtrunA17_Chr4g0040711 24.605 443 258 19 18 420 18 424 2.51e-17 84.0
Msa0603640 MtrunA17_Chr4g0029151 24.609 447 265 14 18 427 30 441 3.39e-17 83.6
Msa0603640 MtrunA17_Chr2g0283041 25.110 227 156 6 205 430 211 424 9.53e-16 79.3
Msa0603640 MtrunA17_Chr6g0454391 45.161 62 34 0 346 407 13 74 4.19e-14 68.9
Msa0603640 MtrunA17_Chr6g0454281 33.333 168 93 4 10 162 12 175 9.17e-14 70.5
Msa0603640 MtrunA17_Chr6g0454111 29.480 173 99 7 145 299 16 183 2.72e-11 62.4
Msa0603640 MtrunA17_Chr7g0243731 42.029 69 39 1 326 393 4 72 4.30e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0603640 AT3G46670.1 44.105 458 240 8 2 452 3 451 2.39e-126 374
Msa0603640 AT3G46660.1 44.783 460 236 9 2 452 8 458 2.54e-122 364
Msa0603640 AT5G59590.1 43.584 452 240 9 2 446 3 446 8.76e-121 360
Msa0603640 AT3G11340.1 43.886 458 240 10 1 452 1 447 2.55e-119 356
Msa0603640 AT5G59580.1 42.358 458 249 8 2 453 3 451 6.67e-119 355
Msa0603640 AT5G05870.1 43.640 456 248 7 1 449 1 454 6.03e-117 350
Msa0603640 AT5G05880.1 42.544 456 253 5 1 452 1 451 1.32e-116 349
Msa0603640 AT2G26480.1 43.107 457 239 10 3 450 2 446 2.01e-116 349
Msa0603640 AT3G46680.1 42.920 452 239 10 4 446 5 446 1.60e-115 347
Msa0603640 AT3G46700.1 42.035 452 240 9 6 449 7 444 3.03e-115 346
Msa0603640 AT5G38010.1 43.046 453 246 8 4 449 6 453 4.23e-114 343
Msa0603640 AT3G46720.1 43.556 450 232 9 6 449 7 440 9.21e-113 339
Msa0603640 AT3G46650.1 41.324 438 230 7 4 438 6 419 2.13e-112 338
Msa0603640 AT5G38040.1 44.064 438 229 8 17 447 19 447 4.61e-112 338
Msa0603640 AT5G05860.1 42.105 456 251 8 2 452 3 450 6.30e-112 337
Msa0603640 AT3G46690.1 42.794 451 243 9 6 449 7 449 8.88e-112 337
Msa0603640 AT5G05890.1 41.394 459 258 7 1 452 1 455 1.26e-108 329
Msa0603640 AT5G05900.1 41.357 457 250 7 1 449 1 447 1.58e-106 323
Msa0603640 AT3G55700.1 38.675 468 258 11 1 453 1 454 1.23e-105 322
Msa0603640 AT3G55710.1 40.506 474 245 14 1 453 1 458 1.32e-99 306
Msa0603640 AT1G22360.1 33.913 460 253 11 6 428 8 453 5.40e-84 266
Msa0603640 AT1G22400.1 33.921 454 256 10 6 425 11 454 4.91e-82 261
Msa0603640 AT1G22380.1 32.091 483 282 11 4 450 9 481 8.90e-81 258
Msa0603640 AT1G22360.2 33.550 462 250 13 6 428 8 451 3.53e-77 248
Msa0603640 AT1G22340.1 32.727 495 283 14 1 454 1 486 5.07e-77 248
Msa0603640 AT5G37950.1 40.625 352 195 7 23 369 1 343 1.21e-76 243
Msa0603640 AT5G37950.2 39.828 349 196 6 23 369 1 337 1.20e-74 238
Msa0603640 AT1G22370.2 34.829 468 256 13 6 438 11 464 3.05e-74 241
Msa0603640 AT1G78270.1 33.263 475 273 14 12 451 17 482 8.49e-71 232
Msa0603640 AT2G36770.1 29.423 503 288 19 1 450 1 489 3.29e-55 191
Msa0603640 AT1G05680.1 30.736 462 277 16 9 446 7 449 6.64e-55 189
Msa0603640 AT2G36780.1 29.563 504 290 16 1 452 1 491 1.85e-54 189
Msa0603640 AT2G28080.1 30.193 467 271 16 12 445 22 466 4.53e-54 188
Msa0603640 AT3G50740.1 31.568 472 272 13 5 441 4 459 5.34e-54 188
Msa0603640 AT4G15500.1 29.661 472 275 14 1 438 3 451 1.02e-52 184
Msa0603640 AT2G36970.1 31.356 472 281 16 9 449 11 470 3.98e-52 183
Msa0603640 AT2G36750.1 29.719 498 292 16 1 452 1 486 8.03e-52 182
Msa0603640 AT1G05675.1 30.519 462 278 16 9 446 7 449 1.97e-51 180
Msa0603640 AT4G15550.1 29.707 478 275 15 9 446 14 470 2.91e-51 180
Msa0603640 AT2G31790.1 28.936 470 293 14 1 446 1 453 5.10e-50 176
Msa0603640 AT5G17050.1 27.872 470 301 15 3 452 8 459 1.64e-49 175
Msa0603640 AT4G14090.1 28.846 468 286 14 3 446 8 452 2.13e-49 175
Msa0603640 AT2G23250.1 29.067 461 279 14 11 449 1 435 3.77e-49 174
Msa0603640 AT4G01070.1 29.592 490 266 18 2 443 3 461 4.46e-49 174
Msa0603640 AT2G36760.1 30.652 460 266 18 9 426 15 463 8.63e-49 174
Msa0603640 AT4G15480.1 27.802 464 288 16 9 440 20 468 1.12e-48 174
Msa0603640 AT4G15490.1 27.079 469 298 12 5 443 4 458 2.20e-48 172
Msa0603640 AT3G21560.1 27.406 478 297 16 9 453 13 473 8.68e-48 171
Msa0603640 AT1G05560.1 29.956 454 278 15 9 440 6 441 1.08e-47 171
Msa0603640 AT1G22370.1 38.408 289 151 8 169 438 14 294 1.46e-47 166
Msa0603640 AT1G05560.2 29.956 454 278 15 9 440 56 491 2.76e-47 171
Msa0603640 AT1G24100.1 30.655 473 276 16 4 447 7 456 3.09e-47 169
Msa0603640 AT2G23260.1 28.782 476 284 18 2 449 5 453 5.88e-47 168
Msa0603640 AT3G02100.1 28.661 478 282 17 6 451 11 461 8.33e-47 168
Msa0603640 AT5G66690.1 30.407 467 276 16 5 438 4 454 9.13e-47 168
Msa0603640 AT5G26310.1 29.498 478 266 16 5 438 4 454 1.37e-46 168
Msa0603640 AT5G17040.1 27.790 439 284 12 25 452 26 442 1.89e-46 167
Msa0603640 AT2G30140.1 28.723 470 291 11 4 453 10 455 4.11e-46 166
Msa0603640 AT2G36800.1 29.938 481 281 18 17 452 21 490 5.16e-46 167
Msa0603640 AT2G30140.2 28.785 469 291 11 4 453 10 454 5.54e-46 166
Msa0603640 AT2G43820.1 29.039 458 276 15 6 440 5 436 6.64e-46 165
Msa0603640 AT2G31750.1 28.035 453 270 14 1 427 1 423 1.01e-45 165
Msa0603640 AT2G43840.1 29.957 464 268 21 4 440 3 436 1.82e-45 164
Msa0603640 AT2G31750.2 28.035 453 270 14 1 427 1 423 1.90e-45 165
Msa0603640 AT3G53160.1 28.958 480 279 17 9 441 9 473 3.29e-45 164
Msa0603640 AT2G43840.2 29.957 464 268 21 4 440 3 436 6.04e-45 163
Msa0603640 AT2G30150.2 27.907 473 288 16 5 452 11 455 5.55e-44 160
Msa0603640 AT2G30150.1 28.078 463 281 15 15 452 4 439 7.23e-44 159
Msa0603640 AT2G36790.1 29.897 485 275 20 17 452 22 490 1.20e-43 160
Msa0603640 AT5G17030.1 28.919 370 235 10 99 453 103 459 1.71e-43 159
Msa0603640 AT1G05530.1 28.480 467 292 14 9 450 6 455 2.35e-43 159
Msa0603640 AT5G03490.1 30.000 480 270 18 2 447 13 460 1.17e-42 157
Msa0603640 AT3G16520.3 30.411 365 208 16 109 447 113 457 2.38e-42 156
Msa0603640 AT3G16520.1 29.412 357 208 15 109 441 113 449 6.12e-42 154
Msa0603640 AT5G12890.1 29.375 480 294 16 2 443 3 475 7.38e-42 155
Msa0603640 AT4G34131.1 25.000 496 312 13 1 451 1 481 8.23e-42 155
Msa0603640 AT3G16520.2 30.000 350 201 15 109 434 113 442 1.29e-40 151
Msa0603640 AT1G01420.1 28.667 450 289 17 2 428 3 443 3.49e-40 150
Msa0603640 AT1G01420.2 28.667 450 289 17 2 428 6 446 3.88e-40 150
Msa0603640 AT2G15490.3 27.027 481 289 16 17 453 16 478 7.96e-40 149
Msa0603640 AT1G30530.1 27.809 356 236 10 106 452 110 453 1.72e-39 148
Msa0603640 AT5G17040.2 32.800 250 156 5 206 452 100 340 2.12e-39 145
Msa0603640 AT2G29740.1 27.551 490 292 17 1 446 1 471 4.74e-39 147
Msa0603640 AT2G15490.1 27.010 485 287 17 17 453 16 481 4.93e-39 147
Msa0603640 AT2G15480.1 25.400 500 307 18 1 453 1 481 9.00e-39 147
Msa0603640 AT4G34138.1 26.419 458 294 12 17 440 20 468 9.17e-39 147
Msa0603640 AT2G29730.1 27.673 477 297 18 9 453 6 466 1.55e-38 145
Msa0603640 AT3G22250.1 27.511 458 280 16 1 427 1 437 3.90e-38 144
Msa0603640 AT2G15480.2 25.686 510 303 20 1 453 1 491 4.80e-38 145
Msa0603640 AT1G10400.1 28.884 457 263 18 1 421 1 431 4.88e-38 144
Msa0603640 AT1G51210.1 29.613 439 249 17 15 426 27 432 7.20e-38 143
Msa0603640 AT3G53150.1 28.947 418 254 14 6 392 20 425 1.77e-37 144
Msa0603640 AT4G34135.1 25.771 454 285 17 1 413 1 443 3.44e-37 142
Msa0603640 AT2G18570.1 29.299 471 282 21 7 442 5 459 5.52e-37 141
Msa0603640 AT3G21760.1 27.708 480 290 13 9 442 5 473 1.01e-36 141
Msa0603640 AT3G21790.1 28.224 411 231 12 89 453 94 486 1.10e-36 141
Msa0603640 AT1G07250.1 28.883 367 212 10 89 426 101 447 2.80e-36 139
Msa0603640 AT2G29750.1 26.667 480 291 15 1 438 1 461 3.51e-36 139
Msa0603640 AT4G15280.1 27.235 481 300 15 9 450 5 474 1.35e-35 137
Msa0603640 AT4G15280.2 27.235 481 300 15 9 450 37 506 1.87e-35 138
Msa0603640 AT4G36770.1 34.137 249 134 7 201 427 199 439 2.70e-35 136
Msa0603640 AT3G21800.1 26.559 497 292 19 6 449 3 479 3.74e-35 136
Msa0603640 AT3G21780.1 27.966 472 297 15 9 447 5 466 1.42e-34 135
Msa0603640 AT1G01390.2 28.401 419 239 15 2 384 20 413 3.49e-34 134
Msa0603640 AT1G01390.1 28.401 419 239 15 2 384 3 396 3.93e-34 134
Msa0603640 AT4G15260.1 29.428 367 213 11 117 450 2 355 4.68e-34 131
Msa0603640 AT1G07260.1 29.854 412 221 14 47 426 71 446 8.89e-34 132
Msa0603640 AT2G29710.1 27.637 474 299 16 8 451 5 464 1.50e-33 132
Msa0603640 AT5G14860.1 27.455 499 284 22 1 447 1 473 6.06e-33 130
Msa0603640 AT2G18560.1 33.333 243 135 7 205 427 117 352 9.06e-33 128
Msa0603640 AT5G49690.1 28.251 446 258 14 18 431 20 435 1.08e-32 129
Msa0603640 AT1G73880.1 26.722 479 295 21 10 454 15 471 1.33e-32 129
Msa0603640 AT3G21750.1 25.755 497 282 18 9 450 5 469 2.68e-31 125
Msa0603640 AT5G65550.1 25.336 446 277 13 18 430 19 441 2.32e-30 123
Msa0603640 AT2G16890.2 25.911 494 290 18 1 447 1 465 5.04e-29 119
Msa0603640 AT2G16890.3 27.273 429 246 17 1 392 1 400 8.87e-28 115
Msa0603640 AT1G07240.1 28.142 366 231 12 109 451 121 477 1.16e-27 115
Msa0603640 AT4G27570.1 25.000 428 269 16 18 426 17 411 2.29e-21 96.7
Msa0603640 AT4G27560.1 24.942 433 277 16 18 435 17 416 4.56e-21 95.9
Msa0603640 AT1G64910.1 24.566 403 250 14 18 402 16 382 1.05e-20 94.7
Msa0603640 AT5G54010.1 25.879 398 257 14 18 402 16 388 8.35e-19 89.0
Msa0603640 AT5G53990.1 23.951 405 250 11 18 402 16 382 1.29e-18 88.2
Msa0603640 AT1G64920.1 24.318 440 270 14 18 435 16 414 2.21e-18 87.8
Msa0603640 AT4G01070.2 25.797 345 192 14 2 313 3 316 4.96e-18 85.5
Msa0603640 AT2G22590.1 28.261 230 140 7 215 431 233 450 8.71e-18 85.9
Msa0603640 AT3G29630.1 25.187 401 254 14 18 403 16 385 3.87e-17 84.0
Msa0603640 AT4G09500.2 23.023 430 283 13 18 427 16 417 1.20e-16 82.4
Msa0603640 AT1G06000.1 24.421 475 280 19 3 446 4 430 8.58e-16 79.7
Msa0603640 AT4G34135.2 24.324 333 215 13 1 303 1 326 1.59e-14 75.1
Msa0603640 AT2G22930.1 23.272 434 285 14 18 431 16 421 2.03e-14 75.5
Msa0603640 AT1G50580.1 23.853 436 279 17 18 430 16 421 3.95e-14 74.7
Msa0603640 AT3G29630.2 24.439 401 231 12 18 403 16 359 4.98e-14 74.3
Msa0603640 AT4G09500.1 22.558 430 260 13 18 427 16 392 2.43e-13 72.0
Msa0603640 AT5G54060.1 25.310 403 235 15 18 385 23 394 3.91e-13 71.6

Find 118 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTTGTCAACCTTATTT+TGG 0.142647 4_2:+48267173 Msa0603640:CDS
GTTGATTTGTCAAATTAAAA+AGG 0.172101 4_2:-48266614 None:intergenic
TTCTGTGTTATATGTAAGTT+TGG 0.192009 4_2:+48266869 Msa0603640:CDS
ACAGAATTGAAGCATGAAAT+TGG 0.193471 4_2:+48267341 Msa0603640:CDS
TCCTCATGTGATGCACTAAA+TGG 0.206841 4_2:+48267380 Msa0603640:CDS
CAAAATTCTTGGAAGTGATT+TGG 0.212817 4_2:-48265498 None:intergenic
GTAACAGAGAAATTTATTTA+AGG 0.218606 4_2:+48265217 None:intergenic
AGCAATATCTACAAAATTCT+TGG 0.228718 4_2:-48265509 None:intergenic
ACCCTCTGATCTCCAAAATA+AGG 0.251562 4_2:-48267185 None:intergenic
ATGAAGCTGTTGGAGGGTTT+TGG 0.256108 4_2:+48267099 Msa0603640:CDS
GGTTAACTTTGTATAGCTTT+TGG 0.280771 4_2:-48266737 None:intergenic
TTTGTCCTTCATCGACTCTT+TGG 0.284216 4_2:+48265648 Msa0603640:CDS
AACACTTTCAATAACACCTT+TGG 0.290070 4_2:+48266662 Msa0603640:CDS
AAAATTCTTGGAAGTGATTT+GGG 0.297761 4_2:-48265497 None:intergenic
AAATAAGGTTGACAAATAAT+TGG 0.298423 4_2:-48267170 None:intergenic
ACTAGTATTGTTAGCATCAT+TGG 0.305191 4_2:-48266790 None:intergenic
ACACCTACTTTAACATCTTC+TGG 0.305501 4_2:-48267023 None:intergenic
GCTTGGTAGCTTTAGTTCCT+TGG 0.342541 4_2:-48265671 None:intergenic
CCATGTTTGGAAGGTGGGTT+TGG 0.350717 4_2:+48267226 Msa0603640:CDS
AATCGCAGCAAGTCCAGTTC+TGG 0.355643 4_2:-48266579 None:intergenic
AAGGGACTTGGTGCCAGAAC+TGG 0.363055 4_2:+48266566 Msa0603640:CDS
GTGGGAGGTTTGTACTATAT+TGG 0.365527 4_2:-48265263 None:intergenic
GGCACCTCAAAGTGAAGTTT+TGG 0.366545 4_2:+48267073 Msa0603640:CDS
AAGGGTGGTTAGAAGACTTA+TGG 0.373991 4_2:+48267283 Msa0603640:CDS
AAGGATCAGGGGAATTGAAA+TGG 0.377470 4_2:-48265423 None:intergenic
ACAGCAGACAAAATTTCCTT+TGG 0.377724 4_2:+48266949 Msa0603640:CDS
CAAGGTTGTTGAGCCATGTT+TGG 0.393614 4_2:+48267213 Msa0603640:CDS
ACACTTTCAATAACACCTTT+GGG 0.400731 4_2:+48266663 Msa0603640:CDS
TTAGGATGATTAGAAGGATC+AGG 0.411557 4_2:-48265436 None:intergenic
CATATTCAATTAACCTTACA+AGG 0.413889 4_2:-48267473 None:intergenic
TTTGGGAAGCATAGCTAGTT+GGG 0.418943 4_2:+48266887 Msa0603640:CDS
TAGAAATTAGGATGATTAGA+AGG 0.426359 4_2:-48265442 None:intergenic
AACTCAAACTAGGCACCGTT+TGG 0.426910 4_2:+48265303 Msa0603640:CDS
AGAGAGGCTGTGTTGTGAAA+TGG 0.428869 4_2:+48267051 Msa0603640:CDS
AAAGTGATAATTGTATATCT+TGG 0.430200 4_2:+48266826 Msa0603640:CDS
CAGCAGACAAAATTTCCTTT+GGG 0.432619 4_2:+48266950 Msa0603640:CDS
ATTAACCTTACAAGGTACTT+AGG 0.432674 4_2:-48267465 None:intergenic
AATCATGTGTAGAGGACCTA+TGG 0.435021 4_2:-48266766 None:intergenic
GTTTGGGAAGCATAGCTAGT+TGG 0.438235 4_2:+48266886 Msa0603640:CDS
ATTGCTTGCATCATCTATGA+TGG 0.440072 4_2:+48265622 Msa0603640:CDS
TTGAGCCATGTTTGGAAGGT+GGG 0.440282 4_2:+48267221 Msa0603640:CDS
GATTTCACAACAAAAGTAAA+GGG 0.443360 4_2:+48267435 Msa0603640:exon
TGTGCCAAAACTTCACTTTG+AGG 0.449664 4_2:-48267077 None:intergenic
TTTGGAAGGTGGGTTTGGAA+TGG 0.450767 4_2:+48267231 Msa0603640:CDS
CAGAATTGAAGCATGAAATT+GGG 0.452258 4_2:+48267342 Msa0603640:CDS
GCCACCATCCTTCATTCAAA+AGG 0.455870 4_2:+48265376 Msa0603640:CDS
AGGATCAGGGGAATTGAAAT+GGG 0.464443 4_2:-48265422 None:intergenic
AATGGTGTAATCTAATAGAA+AGG 0.468912 4_2:+48267249 Msa0603640:CDS
TCTGTGTTATATGTAAGTTT+GGG 0.478228 4_2:+48266870 Msa0603640:CDS
CTAATATCACCACCTTTACA+AGG 0.481870 4_2:+48265328 Msa0603640:CDS
AGATTCAAAGTCAAGGGACT+TGG 0.486018 4_2:+48266554 Msa0603640:intron
GAGAGGCTGTGTTGTGAAAT+GGG 0.505584 4_2:+48267052 Msa0603640:CDS
GAACACCTAAGTACCTTGTA+AGG 0.513311 4_2:+48267460 Msa0603640:three_prime_UTR
ATGGTGTAATCTAATAGAAA+GGG 0.513501 4_2:+48267250 Msa0603640:CDS
TAGGATGATTAGAAGGATCA+GGG 0.514325 4_2:-48265435 None:intergenic
TGATTTCACAACAAAAGTAA+AGG 0.517067 4_2:+48267434 Msa0603640:exon
AAAGTGCGTATCTTCACTTA+AGG 0.517642 4_2:+48265546 Msa0603640:CDS
TGAAACATTGTTGATTGACT+CGG 0.527407 4_2:-48266982 None:intergenic
TAGAAAGGGATGAGATTGAA+AGG 0.527792 4_2:+48267264 Msa0603640:CDS
TTGCCAGAAGATGTTAAAGT+AGG 0.529974 4_2:+48267020 Msa0603640:CDS
CTTCATCGACTCTTTGGCCA+AGG 0.531555 4_2:+48265654 Msa0603640:CDS
AAATTAGCAAATGAAAATCA+TGG 0.533726 4_2:+48265592 Msa0603640:CDS
ACAGAGAAATTTATTTAAGG+AGG 0.534500 4_2:+48265220 None:intergenic
AAGGGATGAGATTGAAAGGG+TGG 0.538244 4_2:+48267268 Msa0603640:CDS
ATCATGTGTAGAGGACCTAT+GGG 0.538887 4_2:-48266765 None:intergenic
CCAAACCCACCTTCCAAACA+TGG 0.541153 4_2:-48267226 None:intergenic
GTTGAGCCATGTTTGGAAGG+TGG 0.541502 4_2:+48267220 Msa0603640:CDS
GGAGTTATGTGGCCTTGTAA+AGG 0.543909 4_2:-48265340 None:intergenic
TGGCACATGAAGCTGTTGGA+GGG 0.545267 4_2:+48267093 Msa0603640:CDS
GAAACATTGTTGATTGACTC+GGG 0.548873 4_2:-48266981 None:intergenic
TGAAATTGGGATAGCTGTGA+AGG 0.553273 4_2:+48267355 Msa0603640:CDS
TTGGCACATGAAGCTGTTGG+AGG 0.555816 4_2:+48267092 Msa0603640:CDS
ATGGGTGTGTGCTATGGTGA+TGG 0.557058 4_2:-48265404 None:intergenic
GTGGTTCGAAAGACTATGCT+TGG 0.557067 4_2:-48265688 None:intergenic
TTAGATAAACCATCGGAGAA+AGG 0.558570 4_2:-48265472 None:intergenic
CCTCATGTGATGCACTAAAT+GGG 0.564340 4_2:+48267381 Msa0603640:CDS
AGAAAGGGATGAGATTGAAA+GGG 0.564711 4_2:+48267265 Msa0603640:CDS
GTAGAGGACCTATGGGGAAG+AGG 0.568003 4_2:-48266758 None:intergenic
AAAGGTTACCTTCCATTGCA+AGG 0.569834 4_2:+48265760 Msa0603640:CDS
GTTGTTGAGCCATGTTTGGA+AGG 0.575186 4_2:+48267217 Msa0603640:CDS
AGGTATTACCTTGCAATGGA+AGG 0.578217 4_2:-48265768 None:intergenic
ATTGAAATGGGTGTGTGCTA+TGG 0.578704 4_2:-48265410 None:intergenic
TACATTGGAGAGTTTGTGTG+AGG 0.580087 4_2:+48267142 Msa0603640:CDS
AAAGTTAACCTCTTCCCCAT+AGG 0.583136 4_2:+48266750 Msa0603640:CDS
ATGGTGGCTAGTTGAAGCAT+AGG 0.588164 4_2:-48265361 None:intergenic
AGTTGATGGAAACTCAAACT+AGG 0.597917 4_2:+48265293 Msa0603640:exon
CTGTGGTTGGAATTCTACAT+TGG 0.598732 4_2:+48267127 Msa0603640:CDS
TATGACAGATTCAAAGTCAA+GGG 0.598856 4_2:+48266548 Msa0603640:intron
GAGCTAACTGAAGTTGCTTG+TGG 0.601046 4_2:+48266918 Msa0603640:CDS
GAGATCAGAGGGTAAATGCA+AGG 0.602462 4_2:+48267195 Msa0603640:CDS
AGTAAGGTATTACCTTGCAA+TGG 0.604211 4_2:-48265772 None:intergenic
CTTGGCCAAAGAGTCGATGA+AGG 0.605504 4_2:-48265653 None:intergenic
GAGTAAATTAGTAGCACTAG+TGG 0.606313 4_2:-48265707 None:intergenic
ACTATATTGGTCAATACTTG+CGG 0.607081 4_2:-48265250 None:intergenic
GTTGAAGCATAGGAGTTATG+TGG 0.608795 4_2:-48265351 None:intergenic
CCCATTTAGTGCATCACATG+AGG 0.610628 4_2:-48267381 None:intergenic
AAAGTAGGTGTAGCTGAGAG+AGG 0.613211 4_2:+48267035 Msa0603640:CDS
GTATGACAGATTCAAAGTCA+AGG 0.617752 4_2:+48266547 Msa0603640:intron
ACTTATGGTGAATTCAGAAG+AGG 0.625706 4_2:+48267298 Msa0603640:CDS
TGTCTTCAACTACAAAGCAA+AGG 0.629088 4_2:+48265742 Msa0603640:CDS
TTGGGTATTAGATAAACCAT+CGG 0.634193 4_2:-48265479 None:intergenic
AGGATGATTAGAAGGATCAG+GGG 0.634565 4_2:-48265434 None:intergenic
ACATTGGAGAGTTTGTGTGA+GGG 0.636410 4_2:+48267143 Msa0603640:CDS
TTTCACAACAAAAGTAAAGG+GGG 0.637976 4_2:+48267437 Msa0603640:three_prime_UTR
ATTTCACAACAAAAGTAAAG+GGG 0.641128 4_2:+48267436 Msa0603640:exon
TGGTCAATACTTGCGGTACG+CGG 0.642463 4_2:-48265243 None:intergenic
GTTATGTGGCCTTGTAAAGG+TGG 0.644335 4_2:-48265337 None:intergenic
TCATTGGCAATCATGTGTAG+AGG 0.648239 4_2:-48266774 None:intergenic
GAAATTGGGATAGCTGTGAA+GGG 0.652289 4_2:+48267356 Msa0603640:CDS
GTGGTGATATTAGAACCAAA+CGG 0.661629 4_2:-48265318 None:intergenic
ATGTGATGCACTAAATGGGT+TGG 0.678223 4_2:+48267385 Msa0603640:CDS
TTCACAACAAAAGTAAAGGG+GGG 0.680289 4_2:+48267438 Msa0603640:three_prime_UTR
TTTGTAGTTGAAGACACACA+TGG 0.682898 4_2:-48265735 None:intergenic
GGGTGTTATATTCAACACTG+TGG 0.687875 4_2:+48266683 Msa0603640:CDS
ACTCGGGTCGAATAACCCAA+AGG 0.704731 4_2:-48266965 None:intergenic
GTGTTGAATATAACACCCAA+AGG 0.708873 4_2:-48266678 None:intergenic
CAATCAACAATGTTTCAGCG+TGG 0.710439 4_2:+48266988 Msa0603640:CDS
TCATGTGTAGAGGACCTATG+GGG 0.741563 4_2:-48266764 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAAATAAATTAGTTTTAT+TGG + chr4_2:48266145-48266164 Msa0603640:intron 10.0%
!!! GTTAAATAAATTAGTTTTAT+TGG + chr4_2:48266145-48266164 Msa0603640:intron 10.0%
!! AAAGGTAAAAAATAGAAATT+AGG - chr4_2:48265457-48265476 None:intergenic 15.0%
!!! TTATATTTTCAATTCATTCA+TGG + chr4_2:48265876-48265895 Msa0603640:intron 15.0%
!!! TATATTTTCAATTCATTCAT+GGG + chr4_2:48265877-48265896 Msa0603640:intron 15.0%
!! AAAAATGAGAATATTTCTTA+TGG + chr4_2:48265976-48265995 Msa0603640:intron 15.0%
!! TCTATCTATCTATATATTAT+TGG - chr4_2:48266236-48266255 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG + chr4_2:48266386-48266405 Msa0603640:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG - chr4_2:48266616-48266635 None:intergenic 15.0%
!! AAAGGTAAAAAATAGAAATT+AGG - chr4_2:48265457-48265476 None:intergenic 15.0%
!!! TTATATTTTCAATTCATTCA+TGG + chr4_2:48265876-48265895 Msa0603640:intron 15.0%
!!! TATATTTTCAATTCATTCAT+GGG + chr4_2:48265877-48265896 Msa0603640:intron 15.0%
!! AAAAATGAGAATATTTCTTA+TGG + chr4_2:48265976-48265995 Msa0603640:intron 15.0%
!! TCTATCTATCTATATATTAT+TGG - chr4_2:48266236-48266255 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG + chr4_2:48266386-48266405 Msa0603640:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG - chr4_2:48266616-48266635 None:intergenic 15.0%
!! AAATTAGCAAATGAAAATCA+TGG + chr4_2:48265592-48265611 Msa0603640:CDS 20.0%
!! ATCTATCTATATATTATTGG+AGG - chr4_2:48266233-48266252 None:intergenic 20.0%
!! AGCTAAAAAAATTATGGTTA+TGG - chr4_2:48266351-48266370 None:intergenic 20.0%
!! CATACAAGCTAAAAAAATTA+TGG - chr4_2:48266357-48266376 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG - chr4_2:48266615-48266634 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG - chr4_2:48266617-48266636 None:intergenic 20.0%
!! AAAGTGATAATTGTATATCT+TGG + chr4_2:48266826-48266845 Msa0603640:CDS 20.0%
!! AAATAAGGTTGACAAATAAT+TGG - chr4_2:48267173-48267192 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG + chr4_2:48267173-48267192 Msa0603640:CDS 20.0%
!!! ACTTTAATTAGTTTGTTTTG+TGG + chr4_2:48267500-48267519 Msa0603640:three_prime_UTR 20.0%
!! AAATTAGCAAATGAAAATCA+TGG + chr4_2:48265592-48265611 Msa0603640:CDS 20.0%
!! ATCTATCTATATATTATTGG+AGG - chr4_2:48266233-48266252 None:intergenic 20.0%
!! AGCTAAAAAAATTATGGTTA+TGG - chr4_2:48266351-48266370 None:intergenic 20.0%
!! CATACAAGCTAAAAAAATTA+TGG - chr4_2:48266357-48266376 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG - chr4_2:48266615-48266634 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG - chr4_2:48266617-48266636 None:intergenic 20.0%
!! AAAGTGATAATTGTATATCT+TGG + chr4_2:48266826-48266845 Msa0603640:CDS 20.0%
!! AAATAAGGTTGACAAATAAT+TGG - chr4_2:48267173-48267192 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG + chr4_2:48267173-48267192 Msa0603640:CDS 20.0%
!!! ACTTTAATTAGTTTGTTTTG+TGG + chr4_2:48267500-48267519 Msa0603640:three_prime_UTR 20.0%
! TAGAAATTAGGATGATTAGA+AGG - chr4_2:48265445-48265464 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG - chr4_2:48265500-48265519 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG - chr4_2:48265512-48265531 None:intergenic 25.0%
! AAAGTCATAAAGTCATAGTA+AGG - chr4_2:48265791-48265810 None:intergenic 25.0%
!!! TTTTCACCTGTTACTTTTTT+TGG + chr4_2:48265815-48265834 Msa0603640:intron 25.0%
! ATTGATCCAAAAAAAGTAAC+AGG - chr4_2:48265824-48265843 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG - chr4_2:48266054-48266073 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG - chr4_2:48266055-48266074 None:intergenic 25.0%
! TATCTATATATTATTGGAGG+TGG - chr4_2:48266230-48266249 None:intergenic 25.0%
! ATTAAACATGAGGAATCTTT+CGG - chr4_2:48266278-48266297 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG - chr4_2:48266433-48266452 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG + chr4_2:48266869-48266888 Msa0603640:CDS 25.0%
! TCTGTGTTATATGTAAGTTT+GGG + chr4_2:48266870-48266889 Msa0603640:CDS 25.0%
! AATGGTGTAATCTAATAGAA+AGG + chr4_2:48267249-48267268 Msa0603640:CDS 25.0%
! ATGGTGTAATCTAATAGAAA+GGG + chr4_2:48267250-48267269 Msa0603640:CDS 25.0%
! TGATTTCACAACAAAAGTAA+AGG + chr4_2:48267434-48267453 Msa0603640:exon 25.0%
! GATTTCACAACAAAAGTAAA+GGG + chr4_2:48267435-48267454 Msa0603640:exon 25.0%
! ATTTCACAACAAAAGTAAAG+GGG + chr4_2:48267436-48267455 Msa0603640:exon 25.0%
! CATATTCAATTAACCTTACA+AGG - chr4_2:48267476-48267495 None:intergenic 25.0%
! TAGAAATTAGGATGATTAGA+AGG - chr4_2:48265445-48265464 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG - chr4_2:48265500-48265519 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG - chr4_2:48265512-48265531 None:intergenic 25.0%
! AAAGTCATAAAGTCATAGTA+AGG - chr4_2:48265791-48265810 None:intergenic 25.0%
!!! TTTTCACCTGTTACTTTTTT+TGG + chr4_2:48265815-48265834 Msa0603640:intron 25.0%
! ATTGATCCAAAAAAAGTAAC+AGG - chr4_2:48265824-48265843 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG - chr4_2:48266054-48266073 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG - chr4_2:48266055-48266074 None:intergenic 25.0%
! TATCTATATATTATTGGAGG+TGG - chr4_2:48266230-48266249 None:intergenic 25.0%
! ATTAAACATGAGGAATCTTT+CGG - chr4_2:48266278-48266297 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG - chr4_2:48266433-48266452 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG + chr4_2:48266869-48266888 Msa0603640:CDS 25.0%
! TCTGTGTTATATGTAAGTTT+GGG + chr4_2:48266870-48266889 Msa0603640:CDS 25.0%
! AATGGTGTAATCTAATAGAA+AGG + chr4_2:48267249-48267268 Msa0603640:CDS 25.0%
! ATGGTGTAATCTAATAGAAA+GGG + chr4_2:48267250-48267269 Msa0603640:CDS 25.0%
! TGATTTCACAACAAAAGTAA+AGG + chr4_2:48267434-48267453 Msa0603640:exon 25.0%
! GATTTCACAACAAAAGTAAA+GGG + chr4_2:48267435-48267454 Msa0603640:exon 25.0%
! ATTTCACAACAAAAGTAAAG+GGG + chr4_2:48267436-48267455 Msa0603640:exon 25.0%
! CATATTCAATTAACCTTACA+AGG - chr4_2:48267476-48267495 None:intergenic 25.0%
ACTATATTGGTCAATACTTG+CGG - chr4_2:48265253-48265272 None:intergenic 30.0%
!!! TTCCATCAACTTTTTTTGGT+GGG - chr4_2:48265284-48265303 None:intergenic 30.0%
!!! TTTCCATCAACTTTTTTTGG+TGG - chr4_2:48265285-48265304 None:intergenic 30.0%
!!! GAGTTTCCATCAACTTTTTT+TGG - chr4_2:48265288-48265307 None:intergenic 30.0%
!!! TATTTTTTACCTTTCTCCGA+TGG + chr4_2:48265463-48265482 Msa0603640:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG - chr4_2:48265482-48265501 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG - chr4_2:48265501-48265520 None:intergenic 30.0%
! ACTCTATCATTTTCCTTAAG+AGG + chr4_2:48266098-48266117 Msa0603640:intron 30.0%
! CTCTATCATTTTCCTTAAGA+GGG + chr4_2:48266099-48266118 Msa0603640:intron 30.0%
! TTTTATTGGTCATTCTTTGC+TGG + chr4_2:48266159-48266178 Msa0603640:intron 30.0%
TATATTATTGGAGGTGGAAT+TGG - chr4_2:48266224-48266243 None:intergenic 30.0%
TTAAACATGAGGAATCTTTC+GGG - chr4_2:48266277-48266296 None:intergenic 30.0%
TATGACAGATTCAAAGTCAA+GGG + chr4_2:48266548-48266567 Msa0603640:intron 30.0%
AACACTTTCAATAACACCTT+TGG + chr4_2:48266662-48266681 Msa0603640:CDS 30.0%
ACACTTTCAATAACACCTTT+GGG + chr4_2:48266663-48266682 Msa0603640:CDS 30.0%
! GGTTAACTTTGTATAGCTTT+TGG - chr4_2:48266740-48266759 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG - chr4_2:48266793-48266812 None:intergenic 30.0%
! TGAAACATTGTTGATTGACT+CGG - chr4_2:48266985-48267004 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG + chr4_2:48267341-48267360 Msa0603640:CDS 30.0%
CAGAATTGAAGCATGAAATT+GGG + chr4_2:48267342-48267361 Msa0603640:CDS 30.0%
TTTCACAACAAAAGTAAAGG+GGG + chr4_2:48267437-48267456 Msa0603640:three_prime_UTR 30.0%
! ATTAACCTTACAAGGTACTT+AGG - chr4_2:48267468-48267487 None:intergenic 30.0%
ACTATATTGGTCAATACTTG+CGG - chr4_2:48265253-48265272 None:intergenic 30.0%
!!! TTCCATCAACTTTTTTTGGT+GGG - chr4_2:48265284-48265303 None:intergenic 30.0%
!!! TTTCCATCAACTTTTTTTGG+TGG - chr4_2:48265285-48265304 None:intergenic 30.0%
!!! GAGTTTCCATCAACTTTTTT+TGG - chr4_2:48265288-48265307 None:intergenic 30.0%
!!! TATTTTTTACCTTTCTCCGA+TGG + chr4_2:48265463-48265482 Msa0603640:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG - chr4_2:48265482-48265501 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG - chr4_2:48265501-48265520 None:intergenic 30.0%
! ACTCTATCATTTTCCTTAAG+AGG + chr4_2:48266098-48266117 Msa0603640:intron 30.0%
! CTCTATCATTTTCCTTAAGA+GGG + chr4_2:48266099-48266118 Msa0603640:intron 30.0%
! TTTTATTGGTCATTCTTTGC+TGG + chr4_2:48266159-48266178 Msa0603640:intron 30.0%
TATATTATTGGAGGTGGAAT+TGG - chr4_2:48266224-48266243 None:intergenic 30.0%
TTAAACATGAGGAATCTTTC+GGG - chr4_2:48266277-48266296 None:intergenic 30.0%
TATGACAGATTCAAAGTCAA+GGG + chr4_2:48266548-48266567 Msa0603640:intron 30.0%
AACACTTTCAATAACACCTT+TGG + chr4_2:48266662-48266681 Msa0603640:CDS 30.0%
ACACTTTCAATAACACCTTT+GGG + chr4_2:48266663-48266682 Msa0603640:CDS 30.0%
! GGTTAACTTTGTATAGCTTT+TGG - chr4_2:48266740-48266759 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG - chr4_2:48266793-48266812 None:intergenic 30.0%
! TGAAACATTGTTGATTGACT+CGG - chr4_2:48266985-48267004 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG + chr4_2:48267341-48267360 Msa0603640:CDS 30.0%
CAGAATTGAAGCATGAAATT+GGG + chr4_2:48267342-48267361 Msa0603640:CDS 30.0%
TTTCACAACAAAAGTAAAGG+GGG + chr4_2:48267437-48267456 Msa0603640:three_prime_UTR 30.0%
! ATTAACCTTACAAGGTACTT+AGG - chr4_2:48267468-48267487 None:intergenic 30.0%
!! AGTTGATGGAAACTCAAACT+AGG + chr4_2:48265293-48265312 Msa0603640:exon 35.0%
GTGGTGATATTAGAACCAAA+CGG - chr4_2:48265321-48265340 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG + chr4_2:48265328-48265347 Msa0603640:CDS 35.0%
! GAAACCTTTTGAATGAAGGA+TGG - chr4_2:48265383-48265402 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG - chr4_2:48265387-48265406 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG - chr4_2:48265438-48265457 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG - chr4_2:48265439-48265458 None:intergenic 35.0%
TTAGATAAACCATCGGAGAA+AGG - chr4_2:48265475-48265494 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG + chr4_2:48265546-48265565 Msa0603640:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG + chr4_2:48265622-48265641 Msa0603640:CDS 35.0%
GAGTAAATTAGTAGCACTAG+TGG - chr4_2:48265710-48265729 None:intergenic 35.0%
TTTGTAGTTGAAGACACACA+TGG - chr4_2:48265738-48265757 None:intergenic 35.0%
TGTCTTCAACTACAAAGCAA+AGG + chr4_2:48265742-48265761 Msa0603640:CDS 35.0%
! AGTAAGGTATTACCTTGCAA+TGG - chr4_2:48265775-48265794 None:intergenic 35.0%
ATTTGTACACACCCATACAT+GGG + chr4_2:48265935-48265954 Msa0603640:intron 35.0%
AGCAGAAAATTCCCATGTAT+GGG - chr4_2:48265949-48265968 None:intergenic 35.0%
GATAGAGTCGTGTAAACATA+TGG - chr4_2:48266086-48266105 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG + chr4_2:48266193-48266212 Msa0603640:intron 35.0%
CTTCAAGCTCATTAAACATG+AGG - chr4_2:48266288-48266307 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG + chr4_2:48266403-48266422 Msa0603640:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG + chr4_2:48266547-48266566 Msa0603640:intron 35.0%
GTGTTGAATATAACACCCAA+AGG - chr4_2:48266681-48266700 None:intergenic 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG - chr4_2:48266734-48266753 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG + chr4_2:48266949-48266968 Msa0603640:CDS 35.0%
CAGCAGACAAAATTTCCTTT+GGG + chr4_2:48266950-48266969 Msa0603640:CDS 35.0%
! GAAACATTGTTGATTGACTC+GGG - chr4_2:48266984-48267003 None:intergenic 35.0%
TTGCCAGAAGATGTTAAAGT+AGG + chr4_2:48267020-48267039 Msa0603640:CDS 35.0%
ACACCTACTTTAACATCTTC+TGG - chr4_2:48267026-48267045 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG + chr4_2:48267183-48267202 Msa0603640:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG + chr4_2:48267184-48267203 Msa0603640:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG + chr4_2:48267264-48267283 Msa0603640:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG + chr4_2:48267265-48267284 Msa0603640:CDS 35.0%
ACTTATGGTGAATTCAGAAG+AGG + chr4_2:48267298-48267317 Msa0603640:CDS 35.0%
TTCACAACAAAAGTAAAGGG+GGG + chr4_2:48267438-48267457 Msa0603640:three_prime_UTR 35.0%
!! AGTTGATGGAAACTCAAACT+AGG + chr4_2:48265293-48265312 Msa0603640:exon 35.0%
GTGGTGATATTAGAACCAAA+CGG - chr4_2:48265321-48265340 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG + chr4_2:48265328-48265347 Msa0603640:CDS 35.0%
! GAAACCTTTTGAATGAAGGA+TGG - chr4_2:48265383-48265402 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG - chr4_2:48265387-48265406 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG - chr4_2:48265438-48265457 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG - chr4_2:48265439-48265458 None:intergenic 35.0%
TTAGATAAACCATCGGAGAA+AGG - chr4_2:48265475-48265494 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG + chr4_2:48265546-48265565 Msa0603640:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG + chr4_2:48265622-48265641 Msa0603640:CDS 35.0%
GAGTAAATTAGTAGCACTAG+TGG - chr4_2:48265710-48265729 None:intergenic 35.0%
TTTGTAGTTGAAGACACACA+TGG - chr4_2:48265738-48265757 None:intergenic 35.0%
TGTCTTCAACTACAAAGCAA+AGG + chr4_2:48265742-48265761 Msa0603640:CDS 35.0%
! AGTAAGGTATTACCTTGCAA+TGG - chr4_2:48265775-48265794 None:intergenic 35.0%
ATTTGTACACACCCATACAT+GGG + chr4_2:48265935-48265954 Msa0603640:intron 35.0%
AGCAGAAAATTCCCATGTAT+GGG - chr4_2:48265949-48265968 None:intergenic 35.0%
GATAGAGTCGTGTAAACATA+TGG - chr4_2:48266086-48266105 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG + chr4_2:48266193-48266212 Msa0603640:intron 35.0%
CTTCAAGCTCATTAAACATG+AGG - chr4_2:48266288-48266307 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG + chr4_2:48266403-48266422 Msa0603640:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG + chr4_2:48266547-48266566 Msa0603640:intron 35.0%
GTGTTGAATATAACACCCAA+AGG - chr4_2:48266681-48266700 None:intergenic 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG - chr4_2:48266734-48266753 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG + chr4_2:48266949-48266968 Msa0603640:CDS 35.0%
CAGCAGACAAAATTTCCTTT+GGG + chr4_2:48266950-48266969 Msa0603640:CDS 35.0%
! GAAACATTGTTGATTGACTC+GGG - chr4_2:48266984-48267003 None:intergenic 35.0%
TTGCCAGAAGATGTTAAAGT+AGG + chr4_2:48267020-48267039 Msa0603640:CDS 35.0%
ACACCTACTTTAACATCTTC+TGG - chr4_2:48267026-48267045 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG + chr4_2:48267183-48267202 Msa0603640:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG + chr4_2:48267184-48267203 Msa0603640:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG + chr4_2:48267264-48267283 Msa0603640:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG + chr4_2:48267265-48267284 Msa0603640:CDS 35.0%
ACTTATGGTGAATTCAGAAG+AGG + chr4_2:48267298-48267317 Msa0603640:CDS 35.0%
TTCACAACAAAAGTAAAGGG+GGG + chr4_2:48267438-48267457 Msa0603640:three_prime_UTR 35.0%
GTGGGAGGTTTGTACTATAT+TGG - chr4_2:48265266-48265285 None:intergenic 40.0%
!!! CATCAACTTTTTTTGGTGGG+AGG - chr4_2:48265281-48265300 None:intergenic 40.0%
CTCCCACCAAAAAAAGTTGA+TGG + chr4_2:48265279-48265298 Msa0603640:exon 40.0%
GTTGAAGCATAGGAGTTATG+TGG - chr4_2:48265354-48265373 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG - chr4_2:48265380-48265399 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG - chr4_2:48265413-48265432 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG - chr4_2:48265425-48265444 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG - chr4_2:48265426-48265445 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG - chr4_2:48265437-48265456 None:intergenic 40.0%
!! TTTGTCCTTCATCGACTCTT+TGG + chr4_2:48265648-48265667 Msa0603640:CDS 40.0%
AAAGGTTACCTTCCATTGCA+AGG + chr4_2:48265760-48265779 Msa0603640:CDS 40.0%
AGGTATTACCTTGCAATGGA+AGG - chr4_2:48265771-48265790 None:intergenic 40.0%
CATTTGTACACACCCATACA+TGG + chr4_2:48265934-48265953 Msa0603640:intron 40.0%
CAGCAGAAAATTCCCATGTA+TGG - chr4_2:48265950-48265969 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG - chr4_2:48266114-48266133 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG + chr4_2:48266554-48266573 Msa0603640:intron 40.0%
! GGGTGTTATATTCAACACTG+TGG + chr4_2:48266683-48266702 Msa0603640:CDS 40.0%
AAAGTTAACCTCTTCCCCAT+AGG + chr4_2:48266750-48266769 Msa0603640:CDS 40.0%
ATCATGTGTAGAGGACCTAT+GGG - chr4_2:48266768-48266787 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG - chr4_2:48266769-48266788 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG - chr4_2:48266777-48266796 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG + chr4_2:48266887-48266906 Msa0603640:CDS 40.0%
CAATCAACAATGTTTCAGCG+TGG + chr4_2:48266988-48267007 Msa0603640:CDS 40.0%
TGTGCCAAAACTTCACTTTG+AGG - chr4_2:48267080-48267099 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG + chr4_2:48267127-48267146 Msa0603640:CDS 40.0%
TACATTGGAGAGTTTGTGTG+AGG + chr4_2:48267142-48267161 Msa0603640:CDS 40.0%
ACATTGGAGAGTTTGTGTGA+GGG + chr4_2:48267143-48267162 Msa0603640:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG - chr4_2:48267188-48267207 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG + chr4_2:48267283-48267302 Msa0603640:CDS 40.0%
TGAAATTGGGATAGCTGTGA+AGG + chr4_2:48267355-48267374 Msa0603640:CDS 40.0%
GAAATTGGGATAGCTGTGAA+GGG + chr4_2:48267356-48267375 Msa0603640:CDS 40.0%
TCCTCATGTGATGCACTAAA+TGG + chr4_2:48267380-48267399 Msa0603640:CDS 40.0%
CCTCATGTGATGCACTAAAT+GGG + chr4_2:48267381-48267400 Msa0603640:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG + chr4_2:48267385-48267404 Msa0603640:CDS 40.0%
GAACACCTAAGTACCTTGTA+AGG + chr4_2:48267460-48267479 Msa0603640:three_prime_UTR 40.0%
GTGGGAGGTTTGTACTATAT+TGG - chr4_2:48265266-48265285 None:intergenic 40.0%
!!! CATCAACTTTTTTTGGTGGG+AGG - chr4_2:48265281-48265300 None:intergenic 40.0%
CTCCCACCAAAAAAAGTTGA+TGG + chr4_2:48265279-48265298 Msa0603640:exon 40.0%
GTTGAAGCATAGGAGTTATG+TGG - chr4_2:48265354-48265373 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG - chr4_2:48265380-48265399 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG - chr4_2:48265413-48265432 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG - chr4_2:48265425-48265444 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG - chr4_2:48265426-48265445 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG - chr4_2:48265437-48265456 None:intergenic 40.0%
!! TTTGTCCTTCATCGACTCTT+TGG + chr4_2:48265648-48265667 Msa0603640:CDS 40.0%
AAAGGTTACCTTCCATTGCA+AGG + chr4_2:48265760-48265779 Msa0603640:CDS 40.0%
AGGTATTACCTTGCAATGGA+AGG - chr4_2:48265771-48265790 None:intergenic 40.0%
CATTTGTACACACCCATACA+TGG + chr4_2:48265934-48265953 Msa0603640:intron 40.0%
CAGCAGAAAATTCCCATGTA+TGG - chr4_2:48265950-48265969 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG - chr4_2:48266114-48266133 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG + chr4_2:48266554-48266573 Msa0603640:intron 40.0%
! GGGTGTTATATTCAACACTG+TGG + chr4_2:48266683-48266702 Msa0603640:CDS 40.0%
AAAGTTAACCTCTTCCCCAT+AGG + chr4_2:48266750-48266769 Msa0603640:CDS 40.0%
ATCATGTGTAGAGGACCTAT+GGG - chr4_2:48266768-48266787 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG - chr4_2:48266769-48266788 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG - chr4_2:48266777-48266796 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG + chr4_2:48266887-48266906 Msa0603640:CDS 40.0%
CAATCAACAATGTTTCAGCG+TGG + chr4_2:48266988-48267007 Msa0603640:CDS 40.0%
TGTGCCAAAACTTCACTTTG+AGG - chr4_2:48267080-48267099 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG + chr4_2:48267127-48267146 Msa0603640:CDS 40.0%
TACATTGGAGAGTTTGTGTG+AGG + chr4_2:48267142-48267161 Msa0603640:CDS 40.0%
ACATTGGAGAGTTTGTGTGA+GGG + chr4_2:48267143-48267162 Msa0603640:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG - chr4_2:48267188-48267207 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG + chr4_2:48267283-48267302 Msa0603640:CDS 40.0%
TGAAATTGGGATAGCTGTGA+AGG + chr4_2:48267355-48267374 Msa0603640:CDS 40.0%
GAAATTGGGATAGCTGTGAA+GGG + chr4_2:48267356-48267375 Msa0603640:CDS 40.0%
TCCTCATGTGATGCACTAAA+TGG + chr4_2:48267380-48267399 Msa0603640:CDS 40.0%
CCTCATGTGATGCACTAAAT+GGG + chr4_2:48267381-48267400 Msa0603640:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG + chr4_2:48267385-48267404 Msa0603640:CDS 40.0%
GAACACCTAAGTACCTTGTA+AGG + chr4_2:48267460-48267479 Msa0603640:three_prime_UTR 40.0%
! AACTCAAACTAGGCACCGTT+TGG + chr4_2:48265303-48265322 Msa0603640:CDS 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG - chr4_2:48265340-48265359 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG - chr4_2:48265343-48265362 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG - chr4_2:48265364-48265383 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG + chr4_2:48265376-48265395 Msa0603640:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG - chr4_2:48265674-48265693 None:intergenic 45.0%
GTGGTTCGAAAGACTATGCT+TGG - chr4_2:48265691-48265710 None:intergenic 45.0%
AACATGAGGAATCTTTCGGG+AGG - chr4_2:48266274-48266293 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG - chr4_2:48266767-48266786 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG + chr4_2:48266886-48266905 Msa0603640:CDS 45.0%
GAGCTAACTGAAGTTGCTTG+TGG + chr4_2:48266918-48266937 Msa0603640:CDS 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG + chr4_2:48267035-48267054 Msa0603640:CDS 45.0%
AGAGAGGCTGTGTTGTGAAA+TGG + chr4_2:48267051-48267070 Msa0603640:CDS 45.0%
GAGAGGCTGTGTTGTGAAAT+GGG + chr4_2:48267052-48267071 Msa0603640:CDS 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG + chr4_2:48267073-48267092 Msa0603640:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG + chr4_2:48267089-48267108 Msa0603640:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG + chr4_2:48267099-48267118 Msa0603640:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG + chr4_2:48267195-48267214 Msa0603640:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG + chr4_2:48267213-48267232 Msa0603640:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG + chr4_2:48267217-48267236 Msa0603640:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG + chr4_2:48267221-48267240 Msa0603640:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG + chr4_2:48267231-48267250 Msa0603640:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG + chr4_2:48267268-48267287 Msa0603640:CDS 45.0%
CCCATTTAGTGCATCACATG+AGG - chr4_2:48267384-48267403 None:intergenic 45.0%
! AACTCAAACTAGGCACCGTT+TGG + chr4_2:48265303-48265322 Msa0603640:CDS 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG - chr4_2:48265340-48265359 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG - chr4_2:48265343-48265362 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG - chr4_2:48265364-48265383 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG + chr4_2:48265376-48265395 Msa0603640:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG - chr4_2:48265674-48265693 None:intergenic 45.0%
GTGGTTCGAAAGACTATGCT+TGG - chr4_2:48265691-48265710 None:intergenic 45.0%
AACATGAGGAATCTTTCGGG+AGG - chr4_2:48266274-48266293 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG - chr4_2:48266767-48266786 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG + chr4_2:48266886-48266905 Msa0603640:CDS 45.0%
GAGCTAACTGAAGTTGCTTG+TGG + chr4_2:48266918-48266937 Msa0603640:CDS 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG + chr4_2:48267035-48267054 Msa0603640:CDS 45.0%
AGAGAGGCTGTGTTGTGAAA+TGG + chr4_2:48267051-48267070 Msa0603640:CDS 45.0%
GAGAGGCTGTGTTGTGAAAT+GGG + chr4_2:48267052-48267071 Msa0603640:CDS 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG + chr4_2:48267073-48267092 Msa0603640:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG + chr4_2:48267089-48267108 Msa0603640:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG + chr4_2:48267099-48267118 Msa0603640:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG + chr4_2:48267195-48267214 Msa0603640:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG + chr4_2:48267213-48267232 Msa0603640:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG + chr4_2:48267217-48267236 Msa0603640:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG + chr4_2:48267221-48267240 Msa0603640:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG + chr4_2:48267231-48267250 Msa0603640:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG + chr4_2:48267268-48267287 Msa0603640:CDS 45.0%
CCCATTTAGTGCATCACATG+AGG - chr4_2:48267384-48267403 None:intergenic 45.0%
TGGTCAATACTTGCGGTACG+CGG - chr4_2:48265246-48265265 None:intergenic 50.0%
ATGGGTGTGTGCTATGGTGA+TGG - chr4_2:48265407-48265426 None:intergenic 50.0%
CTTGGCCAAAGAGTCGATGA+AGG - chr4_2:48265656-48265675 None:intergenic 50.0%
!! CTTCATCGACTCTTTGGCCA+AGG + chr4_2:48265654-48265673 Msa0603640:CDS 50.0%
AATCGCAGCAAGTCCAGTTC+TGG - chr4_2:48266582-48266601 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG - chr4_2:48266968-48266987 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG + chr4_2:48267092-48267111 Msa0603640:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG + chr4_2:48267093-48267112 Msa0603640:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG + chr4_2:48267114-48267133 Msa0603640:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG + chr4_2:48267220-48267239 Msa0603640:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG - chr4_2:48267229-48267248 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG + chr4_2:48267226-48267245 Msa0603640:CDS 50.0%
TGGTCAATACTTGCGGTACG+CGG - chr4_2:48265246-48265265 None:intergenic 50.0%
ATGGGTGTGTGCTATGGTGA+TGG - chr4_2:48265407-48265426 None:intergenic 50.0%
CTTGGCCAAAGAGTCGATGA+AGG - chr4_2:48265656-48265675 None:intergenic 50.0%
!! CTTCATCGACTCTTTGGCCA+AGG + chr4_2:48265654-48265673 Msa0603640:CDS 50.0%
AATCGCAGCAAGTCCAGTTC+TGG - chr4_2:48266582-48266601 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG - chr4_2:48266968-48266987 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG + chr4_2:48267092-48267111 Msa0603640:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG + chr4_2:48267093-48267112 Msa0603640:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG + chr4_2:48267114-48267133 Msa0603640:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG + chr4_2:48267220-48267239 Msa0603640:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG - chr4_2:48267229-48267248 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG + chr4_2:48267226-48267245 Msa0603640:CDS 50.0%
!! AAGGGACTTGGTGCCAGAAC+TGG + chr4_2:48266566-48266585 Msa0603640:CDS 55.0%
GTAGAGGACCTATGGGGAAG+AGG - chr4_2:48266761-48266780 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG + chr4_2:48267110-48267129 Msa0603640:CDS 55.0%
!! AAGGGACTTGGTGCCAGAAC+TGG + chr4_2:48266566-48266585 Msa0603640:CDS 55.0%
GTAGAGGACCTATGGGGAAG+AGG - chr4_2:48266761-48266780 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG + chr4_2:48267110-48267129 Msa0603640:CDS 55.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 48265228 48267553 48265228 ID=Msa0603640;Name=Msa0603640
chr4_2 mRNA 48265228 48267553 48265228 ID=Msa0603640-mRNA-1;Parent=Msa0603640;Name=Msa0603640-mRNA-1;_AED=0.07;_eAED=0.07;_QI=70|1|1|1|1|1|2|117|454
chr4_2 exon 48265228 48265781 48265228 ID=Msa0603640-mRNA-1:exon:11103;Parent=Msa0603640-mRNA-1
chr4_2 exon 48266556 48267553 48266556 ID=Msa0603640-mRNA-1:exon:11104;Parent=Msa0603640-mRNA-1
chr4_2 five_prime_UTR 48265228 48265297 48265228 ID=Msa0603640-mRNA-1:five_prime_utr;Parent=Msa0603640-mRNA-1
chr4_2 CDS 48265298 48265781 48265298 ID=Msa0603640-mRNA-1:cds;Parent=Msa0603640-mRNA-1
chr4_2 CDS 48266556 48267436 48266556 ID=Msa0603640-mRNA-1:cds;Parent=Msa0603640-mRNA-1
chr4_2 three_prime_UTR 48267437 48267553 48267437 ID=Msa0603640-mRNA-1:three_prime_utr;Parent=Msa0603640-mRNA-1
Gene Sequence

>Msa0603640

ATGGAAACTCAAACTAGGCACCGTTTGGTTCTAATATCACCACCTTTACAAGGCCACATAACTCCTATGCTTCAACTAGCCACCATCCTTCATTCAAAAGGTTTCTCCATCACCATAGCACACACCCATTTCAATTCCCCTGATCCTTCTAATCATCCTAATTTCTATTTTTTACCTTTCTCCGATGGTTTATCTAATACCCAAATCACTTCCAAGAATTTTGTAGATATTGCTTCAACTCTAAATATAAAGTGCGTATCTTCACTTAAGGAGACATTAGTTCATTATATTACAAAATTAGCAAATGAAAATCATGGTGAAAAAATTGCTTGCATCATCTATGATGGATTTTTGTCCTTCATCGACTCTTTGGCCAAGGAACTAAAGCTACCAAGCATAGTCTTTCGAACCACTAGTGCTACTAATTTACTCACTTACCATGTGTGTCTTCAACTACAAAGCAAAGGTTACCTTCCATTGCAAGATTCAAAGTCAAGGGACTTGGTGCCAGAACTGGACTTGCTGCGATTCAAAGATCTACCCCTTTTTAATTTGACAAATCAACATGATTTTCTACAAAGCATAGCAAAAACACTTTCAATAACACCTTTGGGTGTTATATTCAACACTGTGGAAAGCTTAGAAGATTCATCACTAAACCAACTCCAAAAGCTATACAAAGTTAACCTCTTCCCCATAGGTCCTCTACACATGATTGCCAATGATGCTAACAATACTAGTAGCATTCTGCAAAAAAGTGATAATTGTATATCTTGGCTAAACAACAAAGCAAAAAATTCTGTGTTATATGTAAGTTTGGGAAGCATAGCTAGTTGGGAAGAGAAAGAGCTAACTGAAGTTGCTTGTGGCTTAGTCAACAGCAGACAAAATTTCCTTTGGGTTATTCGACCCGAGTCAATCAACAATGTTTCAGCGTGGTTAGAATCTTTGCCAGAAGATGTTAAAGTAGGTGTAGCTGAGAGAGGCTGTGTTGTGAAATGGGCACCTCAAAGTGAAGTTTTGGCACATGAAGCTGTTGGAGGGTTTTGGAGTCACTGTGGTTGGAATTCTACATTGGAGAGTTTGTGTGAGGGAGTGCCAATTATTTGTCAACCTTATTTTGGAGATCAGAGGGTAAATGCAAGGTTGTTGAGCCATGTTTGGAAGGTGGGTTTGGAATGGTGTAATCTAATAGAAAGGGATGAGATTGAAAGGGTGGTTAGAAGACTTATGGTGAATTCAGAAGAGGAGTTGATGAGACAAAGAGCAACAGAATTGAAGCATGAAATTGGGATAGCTGTGAAGGGTTCCTCATGTGATGCACTAAATGGGTTGGTAAAGTATATCTTATCACTGAATGTCTGA
Protein sequence

>Msa0603640

METQTRHRLVLISPPLQGHITPMLQLATILHSKGFSITIAHTHFNSPDPSNHPNFYFLPFSDGLSNTQITSKNFVDIASTLNIKCVSSLKETLVHYITKLANENHGEKIACIIYDGFLSFIDSLAKELKLPSIVFRTTSATNLLTYHVCLQLQSKGYLPLQDSKSRDLVPELDLLRFKDLPLFNLTNQHDFLQSIAKTLSITPLGVIFNTVESLEDSSLNQLQKLYKVNLFPIGPLHMIANDANNTSSILQKSDNCISWLNNKAKNSVLYVSLGSIASWEEKELTEVACGLVNSRQNFLWVIRPESINNVSAWLESLPEDVKVGVAERGCVVKWAPQSEVLAHEAVGGFWSHCGWNSTLESLCEGVPIICQPYFGDQRVNARLLSHVWKVGLEWCNLIERDEIERVVRRLMVNSEEELMRQRATELKHEIGIAVKGSSCDALNGLVKYILSLNV*