AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0684440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684440 MtrunA17_Chr4g0032331 94.725 455 22 2 1 454 1 454 0.0 879
Msa0684440 MtrunA17_Chr3g0112771 44.956 456 241 5 2 453 6 455 1.32e-137 403
Msa0684440 MtrunA17_Chr3g0112761 47.059 459 229 7 1 452 1 452 1.16e-131 388
Msa0684440 MtrunA17_Chr4g0050341 36.059 477 265 13 5 446 16 487 3.66e-88 277
Msa0684440 MtrunA17_Chr3g0092641 34.783 483 269 15 3 450 7 478 8.49e-83 263
Msa0684440 MtrunA17_Chr5g0426431 34.783 483 269 13 3 450 7 478 1.90e-82 262
Msa0684440 MtrunA17_Chr2g0278711 34.583 480 273 14 3 450 7 477 5.20e-78 250
Msa0684440 MtrunA17_Chr6g0454401 33.264 478 274 12 10 450 12 481 5.47e-78 251
Msa0684440 MtrunA17_Chr3g0118671 33.264 478 279 10 10 454 8 478 6.65e-78 250
Msa0684440 MtrunA17_Chr3g0118701 33.128 486 281 12 4 454 11 487 2.68e-77 249
Msa0684440 MtrunA17_Chr6g0454191 32.773 476 279 12 10 450 12 481 2.70e-77 249
Msa0684440 MtrunA17_Chr6g0454331 32.842 475 279 11 3 443 2 470 3.24e-77 248
Msa0684440 MtrunA17_Chr3g0118711 33.058 484 284 12 3 453 8 484 5.20e-77 248
Msa0684440 MtrunA17_Chr6g0454301 31.992 472 285 10 10 450 265 731 1.69e-76 253
Msa0684440 MtrunA17_Chr6g0454301 34.545 220 135 2 230 443 5 221 1.78e-42 159
Msa0684440 MtrunA17_Chr5g0412111 35.220 477 255 16 10 451 6 463 6.70e-76 244
Msa0684440 MtrunA17_Chr6g0453961 32.898 459 271 10 3 429 14 467 1.06e-75 245
Msa0684440 MtrunA17_Chr8g0359821 32.505 483 282 13 3 450 5 478 2.58e-75 243
Msa0684440 MtrunA17_Chr6g0454291 34.244 476 269 11 3 443 2 468 3.48e-75 243
Msa0684440 MtrunA17_Chr3g0078841 32.203 472 278 11 5 443 7 469 9.17e-75 242
Msa0684440 MtrunA17_Chr3g0118771 31.743 482 289 10 6 454 19 493 2.05e-73 239
Msa0684440 MtrunA17_Chr3g0118691 32.848 481 281 11 4 450 11 483 2.32e-73 239
Msa0684440 MtrunA17_Chr6g0454341 30.998 471 283 12 6 443 8 469 2.69e-73 238
Msa0684440 MtrunA17_Chr7g0217881 32.618 466 274 11 10 450 12 462 2.85e-73 238
Msa0684440 MtrunA17_Chr6g0454131 32.848 481 284 14 3 450 5 479 9.02e-73 237
Msa0684440 MtrunA17_Chr6g0453951 32.211 475 282 11 10 450 59 527 1.73e-72 238
Msa0684440 MtrunA17_Chr6g0454321 31.637 452 273 10 6 427 8 453 2.40e-72 240
Msa0684440 MtrunA17_Chr6g0454261 31.144 472 287 11 4 443 6 471 1.30e-71 234
Msa0684440 MtrunA17_Chr6g0454201 34.681 470 262 13 10 443 12 472 1.51e-71 234
Msa0684440 MtrunA17_Chr6g0454141 31.144 472 289 11 3 443 5 471 2.05e-71 233
Msa0684440 MtrunA17_Chr6g0452771 31.601 481 275 13 3 443 5 471 1.74e-70 231
Msa0684440 MtrunA17_Chr3g0118661 31.789 475 283 9 6 447 11 477 3.20e-70 230
Msa0684440 MtrunA17_Chr5g0412131 34.947 475 260 14 10 451 13 471 8.79e-70 229
Msa0684440 MtrunA17_Chr5g0412101 33.402 488 272 15 1 451 1 472 1.76e-69 228
Msa0684440 MtrunA17_Chr6g0454181 31.624 468 278 11 10 443 12 471 2.62e-69 228
Msa0684440 MtrunA17_Chr6g0454211 33.684 475 273 11 3 443 292 758 1.02e-68 233
Msa0684440 MtrunA17_Chr6g0454211 31.365 271 132 9 118 369 1 236 1.30e-29 122
Msa0684440 MtrunA17_Chr6g0454361 32.553 470 271 10 10 443 13 472 1.35e-68 226
Msa0684440 MtrunA17_Chr5g0423981 31.973 441 249 10 10 429 12 422 1.41e-68 225
Msa0684440 MtrunA17_Chr6g0454151 31.546 485 288 13 4 453 6 481 3.03e-68 225
Msa0684440 MtrunA17_Chr6g0454121 31.809 481 289 12 3 450 5 479 8.74e-68 224
Msa0684440 MtrunA17_Chr8g0336331 30.172 464 287 10 10 443 12 468 1.05e-67 224
Msa0684440 MtrunA17_Chr6g0454351 31.513 476 262 13 10 449 14 461 9.40e-65 216
Msa0684440 MtrunA17_Chr3g0118751 30.705 482 265 13 6 454 4 449 8.92e-63 210
Msa0684440 MtrunA17_Chr5g0414321 32.484 471 264 18 10 453 12 455 9.55e-60 202
Msa0684440 MtrunA17_Chr7g0250001 32.308 455 261 17 7 438 6 436 1.74e-59 201
Msa0684440 MtrunA17_Chr5g0414331 33.120 468 267 17 10 454 14 458 2.82e-59 201
Msa0684440 MtrunA17_Chr6g0464881 31.522 460 254 13 1 428 1 431 4.14e-57 195
Msa0684440 MtrunA17_Chr7g0249981 30.128 468 279 17 7 452 25 466 3.14e-56 194
Msa0684440 MtrunA17_Chr6g0454251 33.924 395 219 10 10 370 9 395 1.21e-55 189
Msa0684440 MtrunA17_Chr6g0464921 31.368 475 258 16 1 438 1 444 2.05e-55 191
Msa0684440 MtrunA17_Chr8g0377921 30.083 482 281 16 7 451 3 465 3.83e-55 190
Msa0684440 MtrunA17_Chr3g0122001 32.960 446 241 14 7 419 5 425 1.06e-54 196
Msa0684440 MtrunA17_Chr3g0122001 31.753 485 272 17 7 449 485 952 9.93e-54 193
Msa0684440 MtrunA17_Chr5g0426401 34.076 314 185 8 154 453 9 314 1.25e-54 184
Msa0684440 MtrunA17_Chr3g0121991 33.686 472 258 22 7 438 78 534 2.74e-54 190
Msa0684440 MtrunA17_Chr3g0118721 37.586 290 164 7 175 450 4 290 2.79e-54 183
Msa0684440 MtrunA17_Chr8g0361371 31.340 485 276 19 1 446 1 467 1.28e-53 186
Msa0684440 MtrunA17_Chr8g0377941 30.870 460 251 15 7 427 6 437 3.93e-53 185
Msa0684440 MtrunA17_Chr5g0401721 30.879 489 281 17 1 450 1 471 5.77e-53 184
Msa0684440 MtrunA17_Chr1g0207981 29.106 481 295 13 2 450 7 473 8.03e-53 184
Msa0684440 MtrunA17_Chr6g0454221 40.090 222 123 3 229 443 4 222 9.83e-53 179
Msa0684440 MtrunA17_Chr1g0207861 30.353 481 290 14 1 449 1 468 1.03e-52 184
Msa0684440 MtrunA17_Chr8g0380531 31.116 466 273 17 8 446 10 454 1.08e-52 183
Msa0684440 MtrunA17_Chr8g0365811 29.388 490 281 14 3 449 490 957 1.57e-52 190
Msa0684440 MtrunA17_Chr8g0365811 30.580 448 264 14 9 421 10 445 2.02e-50 184
Msa0684440 MtrunA17_Chr1g0207931 29.025 472 253 13 1 449 85 497 1.60e-52 184
Msa0684440 MtrunA17_Chr1g0161351 29.707 478 295 12 2 449 31 497 2.30e-52 184
Msa0684440 MtrunA17_Chr4g0053501 29.959 484 287 14 2 453 5 468 3.65e-52 183
Msa0684440 MtrunA17_Chr7g0232391 41.313 259 132 7 205 446 207 462 4.85e-52 182
Msa0684440 MtrunA17_Chr6g0454271 34.767 279 168 5 175 443 4 278 1.33e-51 176
Msa0684440 MtrunA17_Chr8g0355011 30.595 353 199 6 109 452 46 361 1.45e-51 178
Msa0684440 MtrunA17_Chr3g0098111 29.474 475 288 13 8 449 9 469 1.64e-51 181
Msa0684440 MtrunA17_Chr4g0044511 29.046 482 269 16 18 451 50 506 2.95e-51 181
Msa0684440 MtrunA17_Chr1g0207971 29.053 475 289 17 1 449 1 453 3.31e-51 179
Msa0684440 MtrunA17_Chr7g0249931 32.794 433 253 16 1 415 34 446 4.72e-51 179
Msa0684440 MtrunA17_Chr5g0431441 29.598 473 277 15 9 450 19 466 1.42e-50 178
Msa0684440 MtrunA17_Chr7g0218791 29.561 433 262 14 15 426 12 422 4.74e-50 176
Msa0684440 MtrunA17_Chr1g0207951 31.092 476 271 16 8 449 656 1108 5.63e-50 182
Msa0684440 MtrunA17_Chr1g0207951 29.741 464 285 16 9 449 125 570 1.75e-48 178
Msa0684440 MtrunA17_Chr7g0232411 31.423 471 255 17 28 446 8 462 8.82e-50 176
Msa0684440 MtrunA17_Chr6g0486251 30.353 481 280 17 1 446 1 461 2.32e-49 174
Msa0684440 MtrunA17_Chr6g0486201 30.353 481 280 17 1 446 1 461 2.32e-49 174
Msa0684440 MtrunA17_Chr8g0366391 29.109 505 282 21 1 453 1 481 3.22e-49 175
Msa0684440 MtrunA17_Chr6g0459311 30.105 475 289 16 1 446 8 468 4.66e-49 174
Msa0684440 MtrunA17_Chr4g0053321 28.921 491 271 14 8 453 26 483 4.77e-49 174
Msa0684440 MtrunA17_Chr2g0329111 30.591 474 283 15 6 444 4 466 1.92e-48 172
Msa0684440 MtrunA17_Chr8g0373301 30.962 478 280 16 2 446 3 463 5.07e-48 171
Msa0684440 MtrunA17_Chr6g0454171 32.523 329 177 9 125 443 8 301 5.22e-48 167
Msa0684440 MtrunA17_Chr7g0232331 29.677 465 272 15 28 446 8 463 6.21e-48 171
Msa0684440 MtrunA17_Chr7g0232341 29.979 477 275 16 9 446 7 463 9.28e-48 171
Msa0684440 MtrunA17_Chr7g0218831 29.613 439 262 13 8 426 6 417 1.12e-47 169
Msa0684440 MtrunA17_Chr7g0218811 28.384 458 291 13 8 450 15 450 1.96e-47 169
Msa0684440 MtrunA17_Chr7g0218841 28.833 437 269 13 8 426 6 418 3.73e-47 168
Msa0684440 MtrunA17_Chr8g0339631 34.167 360 205 12 109 443 110 462 4.42e-47 169
Msa0684440 MtrunA17_Chr8g0334831 29.899 495 278 23 1 446 1 475 4.96e-47 169
Msa0684440 MtrunA17_Chr1g0207831 28.067 481 282 16 8 449 8 463 1.01e-46 167
Msa0684440 MtrunA17_Chr7g0218821 29.147 422 254 14 9 409 6 403 1.10e-46 167
Msa0684440 MtrunA17_Chr8g0339451 32.316 393 234 9 76 442 70 456 1.30e-46 167
Msa0684440 MtrunA17_Chr5g0440421 30.297 505 287 17 2 452 3 496 1.36e-46 168
Msa0684440 MtrunA17_Chr8g0347281 29.675 492 269 20 1 442 1 465 5.26e-46 166
Msa0684440 MtrunA17_Chr8g0339601 35.738 305 160 9 152 436 27 315 5.49e-46 162
Msa0684440 MtrunA17_Chr6g0464841 29.867 452 272 17 1 428 1 431 7.79e-46 165
Msa0684440 MtrunA17_Chr6g0463851 28.717 491 290 18 1 446 4 479 9.92e-46 165
Msa0684440 MtrunA17_Chr1g0153451 29.932 441 251 12 52 446 32 460 1.29e-45 164
Msa0684440 MtrunA17_Chr6g0464861 29.333 450 276 16 1 428 1 430 1.34e-45 164
Msa0684440 MtrunA17_Chr8g0335161 32.234 394 231 11 81 445 76 462 1.38e-45 164
Msa0684440 MtrunA17_Chr8g0347271 29.462 465 280 15 9 442 19 466 2.15e-45 164
Msa0684440 MtrunA17_Chr5g0401851 29.000 500 297 17 1 454 1 488 2.19e-45 164
Msa0684440 MtrunA17_Chr7g0265151 28.283 495 299 17 1 450 1 484 2.34e-45 164
Msa0684440 MtrunA17_Chr6g0463861 28.778 483 290 16 7 453 13 477 2.63e-45 164
Msa0684440 MtrunA17_Chr4g0066221 27.959 490 293 15 1 446 4 477 3.51e-45 164
Msa0684440 MtrunA17_Chr6g0464871 29.268 451 276 16 1 428 13 443 3.76e-45 163
Msa0684440 MtrunA17_Chr6g0462531 29.747 474 281 19 10 447 5 462 4.98e-45 163
Msa0684440 MtrunA17_Chr4g0044521 27.975 479 275 17 18 453 19 470 7.50e-45 162
Msa0684440 MtrunA17_Chr8g0335141 39.382 259 132 7 205 445 213 464 9.68e-45 162
Msa0684440 MtrunA17_Chr6g0449931 29.980 497 276 19 1 452 1 470 2.87e-44 161
Msa0684440 MtrunA17_Chr4g0066261 29.615 493 267 22 7 446 13 478 4.15e-44 161
Msa0684440 MtrunA17_Chr5g0442561 28.632 475 305 15 6 450 3 473 6.42e-44 160
Msa0684440 MtrunA17_Chr8g0339461 33.867 375 189 15 109 443 110 465 8.04e-44 160
Msa0684440 MtrunA17_Chr4g0066201 29.106 481 272 19 8 446 18 471 9.72e-44 160
Msa0684440 MtrunA17_Chr4g0014061 27.101 476 293 15 17 454 18 477 1.30e-43 159
Msa0684440 MtrunA17_Chr7g0232401 30.685 365 230 9 97 442 100 460 6.85e-43 157
Msa0684440 MtrunA17_Chr4g0066151 27.991 468 279 21 18 446 28 476 7.86e-43 157
Msa0684440 MtrunA17_Chr6g0462541 31.928 332 200 8 112 427 118 439 8.70e-43 157
Msa0684440 MtrunA17_Chr5g0419771 29.323 399 250 11 18 392 46 436 1.31e-42 157
Msa0684440 MtrunA17_Chr4g0066131 28.211 475 283 20 18 453 23 478 2.47e-42 156
Msa0684440 MtrunA17_Chr7g0275511 29.933 451 271 16 9 428 16 452 4.50e-42 155
Msa0684440 MtrunA17_Chr1g0173121 27.907 473 284 18 9 449 15 462 6.22e-42 154
Msa0684440 MtrunA17_Chr1g0159551 27.682 466 279 17 15 449 21 459 6.34e-42 154
Msa0684440 MtrunA17_Chr8g0339441 43.204 206 98 4 256 442 217 422 7.58e-42 154
Msa0684440 MtrunA17_Chr5g0419761 28.302 424 258 15 1 392 1 410 1.07e-41 154
Msa0684440 MtrunA17_Chr7g0265141 28.074 488 292 18 1 441 1 476 1.16e-41 154
Msa0684440 MtrunA17_Chr8g0336731 32.203 354 207 10 118 446 142 487 1.25e-41 154
Msa0684440 MtrunA17_Chr5g0448551 29.425 435 252 15 9 411 8 419 1.35e-41 153
Msa0684440 MtrunA17_Chr4g0066281 26.458 480 284 17 8 446 12 463 1.62e-41 154
Msa0684440 MtrunA17_Chr8g0336691 28.289 456 276 12 34 445 927 1375 1.81e-41 158
Msa0684440 MtrunA17_Chr8g0336691 33.151 365 205 11 109 445 116 469 8.92e-41 155
Msa0684440 MtrunA17_Chr8g0336691 28.000 450 265 14 19 443 491 906 5.44e-36 141
Msa0684440 MtrunA17_Chr8g0370941 28.261 506 288 19 1 449 1 488 2.35e-41 154
Msa0684440 MtrunA17_Chr7g0243681 27.565 497 297 19 1 452 1 479 2.37e-41 153
Msa0684440 MtrunA17_Chr5g0431361 27.455 448 280 10 15 440 19 443 3.34e-41 152
Msa0684440 MtrunA17_Chr4g0072771 27.312 465 293 13 9 451 26 467 4.48e-41 152
Msa0684440 MtrunA17_Chr5g0393591 25.536 466 274 11 9 449 18 435 4.79e-41 152
Msa0684440 MtrunA17_Chr6g0462521 27.079 469 286 16 10 447 5 448 5.57e-41 152
Msa0684440 MtrunA17_Chr4g0072761 28.148 405 250 10 53 443 67 444 9.15e-41 151
Msa0684440 MtrunA17_Chr8g0334861 31.081 444 242 19 52 446 32 460 1.31e-40 151
Msa0684440 MtrunA17_Chr5g0420801 29.339 484 288 19 3 454 2 463 2.43e-40 150
Msa0684440 MtrunA17_Chr5g0448521 26.626 492 286 15 8 451 5 469 2.56e-40 150
Msa0684440 MtrunA17_Chr6g0462551 30.000 330 211 7 112 427 117 440 3.47e-40 150
Msa0684440 MtrunA17_Chr8g0336651 28.270 474 263 14 19 443 792 1237 5.42e-40 153
Msa0684440 MtrunA17_Chr8g0336651 32.024 331 194 9 121 428 119 441 4.03e-38 148
Msa0684440 MtrunA17_Chr8g0336651 34.091 264 137 8 191 445 535 770 9.37e-33 132
Msa0684440 MtrunA17_Chr6g0462571 28.540 459 283 16 18 447 14 456 7.96e-40 149
Msa0684440 MtrunA17_Chr8g0369341 29.792 480 288 19 10 454 8 473 8.88e-40 149
Msa0684440 MtrunA17_Chr5g0428081 28.715 498 290 17 1 452 4 482 8.98e-40 149
Msa0684440 MtrunA17_Chr7g0243931 26.614 511 289 18 1 452 7 490 1.30e-39 149
Msa0684440 MtrunA17_Chr7g0243951 26.722 479 277 17 1 426 1 458 1.45e-39 149
Msa0684440 MtrunA17_Chr7g0275681 29.250 400 245 14 17 392 21 406 3.38e-39 147
Msa0684440 MtrunA17_Chr8g0382021 30.707 368 215 13 82 430 121 467 3.71e-39 147
Msa0684440 MtrunA17_Chr7g0243631 26.747 501 303 16 1 452 1 486 3.76e-39 147
Msa0684440 MtrunA17_Chr7g0265041 26.804 485 289 18 9 443 12 480 5.01e-39 147
Msa0684440 MtrunA17_Chr4g0044501 27.088 491 306 16 1 452 1 478 5.81e-39 147
Msa0684440 MtrunA17_Chr8g0336741 31.343 335 205 8 121 435 126 455 1.28e-38 145
Msa0684440 MtrunA17_Chr7g0232311 31.884 345 205 10 124 446 124 460 1.53e-38 145
Msa0684440 MtrunA17_Chr5g0442541 27.386 482 295 16 6 450 3 466 1.73e-38 145
Msa0684440 MtrunA17_Chr7g0249961 36.715 207 112 4 232 427 37 235 3.16e-38 140
Msa0684440 MtrunA17_Chr8g0374901 28.807 486 276 21 7 446 14 475 3.57e-38 144
Msa0684440 MtrunA17_Chr6g0454371 39.130 161 95 1 283 443 5 162 3.87e-38 136
Msa0684440 MtrunA17_Chr5g0416741 26.271 472 305 14 19 454 24 488 7.83e-38 144
Msa0684440 MtrunA17_Chr5g0442581 27.665 394 245 10 88 450 93 477 7.87e-38 144
Msa0684440 MtrunA17_Chr2g0294931 28.211 475 278 17 18 446 21 478 1.17e-37 143
Msa0684440 MtrunA17_Chr4g0044481 26.634 413 244 12 2 392 22 397 1.33e-37 142
Msa0684440 MtrunA17_Chr5g0403641 27.708 480 282 17 1 447 53 500 1.34e-37 143
Msa0684440 MtrunA17_Chr8g0374941 27.331 472 275 16 7 433 478 926 1.56e-37 146
Msa0684440 MtrunA17_Chr8g0374941 26.667 480 288 19 7 445 13 469 5.60e-36 141
Msa0684440 MtrunA17_Chr8g0374941 27.309 498 270 18 7 446 951 1414 8.83e-36 141
Msa0684440 MtrunA17_Chr7g0243781 27.755 490 304 16 1 452 1 478 1.77e-37 142
Msa0684440 MtrunA17_Chr1g0179901 25.265 471 279 15 18 436 26 475 1.86e-37 143
Msa0684440 MtrunA17_Chr2g0294921 28.838 482 278 18 18 452 170 633 2.08e-37 144
Msa0684440 MtrunA17_Chr4g0011051 27.143 490 273 19 9 438 10 475 2.29e-37 142
Msa0684440 MtrunA17_Chr4g0066171 25.820 488 290 18 8 452 21 479 1.02e-36 140
Msa0684440 MtrunA17_Chr7g0243871 27.129 505 289 18 1 454 1 477 1.02e-36 140
Msa0684440 MtrunA17_Chr3g0079731 28.283 495 276 18 9 447 7 478 1.24e-36 140
Msa0684440 MtrunA17_Chr8g0374931 27.801 482 284 17 1 433 4 470 1.52e-36 140
Msa0684440 MtrunA17_Chr6g0463891 26.176 489 317 14 2 452 5 487 1.59e-36 140
Msa0684440 MtrunA17_Chr7g0243801 28.169 497 291 20 1 452 1 476 3.22e-36 139
Msa0684440 MtrunA17_Chr2g0294941 29.692 357 209 11 111 435 17 363 5.76e-36 136
Msa0684440 MtrunA17_Chr5g0442491 26.804 485 305 15 6 451 3 476 8.61e-36 138
Msa0684440 MtrunA17_Chr7g0265101 25.813 492 307 16 9 453 10 490 8.70e-36 138
Msa0684440 MtrunA17_Chr7g0243771 27.968 497 291 20 1 452 1 475 8.90e-36 138
Msa0684440 MtrunA17_Chr7g0265111 27.033 492 289 16 11 451 45 517 1.38e-35 138
Msa0684440 MtrunA17_Chr2g0302961 27.101 476 300 14 5 447 2 463 1.43e-35 137
Msa0684440 MtrunA17_Chr5g0442521 27.291 491 296 16 6 451 3 477 1.48e-35 137
Msa0684440 MtrunA17_Chr2g0302991 28.452 478 288 18 5 447 2 460 1.72e-35 137
Msa0684440 MtrunA17_Chr7g0265051 26.380 489 306 16 9 453 10 488 1.98e-35 137
Msa0684440 MtrunA17_Chr8g0334851 28.274 481 279 18 1 438 1 458 2.12e-35 137
Msa0684440 MtrunA17_Chr5g0429711 26.403 481 293 16 8 453 11 465 4.39e-35 135
Msa0684440 MtrunA17_Chr3g0106231 25.910 467 287 16 10 450 19 452 4.42e-35 135
Msa0684440 MtrunA17_Chr8g0374971 27.273 495 270 19 9 446 16 477 7.07e-35 135
Msa0684440 MtrunA17_Chr5g0442601 28.418 373 230 11 109 451 512 877 7.24e-35 138
Msa0684440 MtrunA17_Chr5g0442601 28.707 317 187 9 90 392 42 333 8.88e-29 120
Msa0684440 MtrunA17_Chr5g0442511 26.987 478 284 15 6 449 47 493 1.47e-34 135
Msa0684440 MtrunA17_Chr4g0042891 30.659 349 206 13 117 440 118 455 3.93e-34 133
Msa0684440 MtrunA17_Chr1g0153461 40.107 187 98 3 256 428 3 189 4.77e-34 127
Msa0684440 MtrunA17_Chr7g0235051 25.910 467 266 16 1 426 1 428 1.05e-33 132
Msa0684440 MtrunA17_Chr5g0410941 28.099 484 269 20 18 449 33 489 2.22e-33 131
Msa0684440 MtrunA17_Chr5g0431401 31.783 258 152 5 206 451 205 450 2.33e-33 130
Msa0684440 MtrunA17_Chr7g0243861 27.600 500 279 20 9 452 15 487 2.50e-33 131
Msa0684440 MtrunA17_Chr4g0042931 28.475 446 260 15 18 427 17 439 2.56e-33 130
Msa0684440 MtrunA17_Chr5g0431421 31.783 258 152 5 206 451 205 450 3.97e-33 130
Msa0684440 MtrunA17_Chr8g0350881 27.766 479 290 16 10 446 13 477 5.07e-33 130
Msa0684440 MtrunA17_Chr7g0232351 39.773 176 91 5 205 369 207 378 5.61e-33 128
Msa0684440 MtrunA17_Chr5g0431371 30.526 285 173 5 169 440 166 438 1.00e-32 129
Msa0684440 MtrunA17_Chr5g0432731 28.852 305 179 11 169 452 12 299 3.48e-32 124
Msa0684440 MtrunA17_Chr7g0218311 28.451 355 221 11 111 438 124 472 5.56e-32 127
Msa0684440 MtrunA17_Chr4g0060511 26.923 468 275 18 9 426 12 462 6.35e-32 127
Msa0684440 MtrunA17_Chr8g0336261 40.458 131 75 1 283 413 5 132 6.78e-32 118
Msa0684440 MtrunA17_Chr7g0243711 36.937 222 115 8 250 452 101 316 8.47e-32 124
Msa0684440 MtrunA17_Chr7g0243761 26.932 427 260 15 1 392 1 410 1.12e-31 126
Msa0684440 MtrunA17_Chr7g0243851 32.847 274 152 9 205 452 175 442 1.37e-31 125
Msa0684440 MtrunA17_Chr5g0429681 26.008 496 293 22 2 453 38 503 1.64e-31 126
Msa0684440 MtrunA17_Chr7g0241781 27.093 454 263 20 1 431 1 409 2.59e-31 124
Msa0684440 MtrunA17_Chr3g0106251 27.273 286 187 4 167 443 12 285 1.71e-30 120
Msa0684440 MtrunA17_Chr5g0409591 29.831 295 169 7 184 449 196 481 8.62e-30 121
Msa0684440 MtrunA17_Chr7g0243611 33.333 210 129 5 191 392 65 271 9.48e-30 117
Msa0684440 MtrunA17_Chr7g0241801 26.386 451 270 19 1 431 1 409 1.16e-29 120
Msa0684440 MtrunA17_Chr1g0165701 27.778 378 224 15 112 454 125 488 8.80e-29 118
Msa0684440 MtrunA17_Chr5g0416821 24.948 481 307 17 8 452 14 476 9.08e-29 118
Msa0684440 MtrunA17_Chr8g0355221 26.842 380 228 13 112 454 125 491 1.69e-28 117
Msa0684440 MtrunA17_Chr1g0207881 25.551 454 241 15 1 438 1 373 2.08e-28 115
Msa0684440 MtrunA17_Chr7g0243811 34.574 188 117 4 205 390 190 373 1.38e-27 113
Msa0684440 MtrunA17_Chr7g0243911 37.696 191 101 6 252 426 17 205 1.51e-27 109
Msa0684440 MtrunA17_Chr8g0361411 27.254 477 291 18 1 447 1 451 1.59e-27 114
Msa0684440 MtrunA17_Chr6g0466831 24.312 436 279 13 18 426 28 439 2.46e-27 114
Msa0684440 MtrunA17_Chr2g0307961 27.426 474 278 20 7 440 11 458 2.74e-27 114
Msa0684440 MtrunA17_Chr4g0069611 25.112 446 263 17 18 426 25 436 5.66e-27 112
Msa0684440 MtrunA17_Chr6g0466841 24.146 439 276 14 18 426 28 439 7.89e-27 112
Msa0684440 MtrunA17_Chr6g0454231 29.004 231 116 5 205 429 7 195 9.31e-27 112
Msa0684440 MtrunA17_Chr6g0454231 30.688 189 112 4 10 180 252 439 1.06e-16 82.4
Msa0684440 MtrunA17_Chr5g0431431 27.308 260 170 6 169 424 116 360 1.46e-26 110
Msa0684440 MtrunA17_Chr7g0231631 29.119 261 169 7 205 454 9 264 6.05e-25 103
Msa0684440 MtrunA17_Chr4g0039881 25.917 436 274 15 18 427 2 414 8.18e-25 106
Msa0684440 MtrunA17_Chr8g0367221 24.890 454 266 17 18 427 1298 1720 1.41e-24 107
Msa0684440 MtrunA17_Chr8g0367221 24.889 450 271 17 18 427 808 1230 4.67e-23 102
Msa0684440 MtrunA17_Chr8g0367221 24.601 439 285 16 18 427 22 443 8.38e-22 99.0
Msa0684440 MtrunA17_Chr2g0302851 26.622 447 283 14 9 431 17 442 4.86e-24 104
Msa0684440 MtrunA17_Chr2g0278721 26.577 444 264 17 18 426 25 441 5.54e-24 105
Msa0684440 MtrunA17_Chr2g0278721 24.017 458 267 14 18 426 527 952 5.65e-22 99.4
Msa0684440 MtrunA17_Chr6g0482061 28.516 256 152 9 205 435 224 473 6.31e-24 103
Msa0684440 MtrunA17_Chr3g0079711 37.500 184 96 6 283 447 3 186 8.93e-24 98.2
Msa0684440 MtrunA17_Chr2g0278741 27.356 435 272 17 18 426 107 523 4.97e-23 102
Msa0684440 MtrunA17_Chr7g0250021 30.247 324 186 14 1 303 6 310 1.04e-22 98.6
Msa0684440 MtrunA17_Chr8g0337381 47.059 119 53 4 334 445 6 121 2.46e-22 92.4
Msa0684440 MtrunA17_Chr6g0453981 31.884 207 121 5 118 305 1 206 4.76e-22 94.4
Msa0684440 MtrunA17_Chr8g0336321 29.694 229 144 5 214 431 223 445 5.59e-22 98.2
Msa0684440 MtrunA17_Chr8g0336251 29.694 229 144 5 214 431 223 445 5.64e-22 98.2
Msa0684440 MtrunA17_Chr4g0066141 36.970 165 86 6 305 452 191 354 7.71e-22 96.7
Msa0684440 MtrunA17_Chr6g0464091 26.984 441 268 19 18 426 28 446 1.06e-21 97.4
Msa0684440 MtrunA17_Chr4g0029131 25.397 441 269 16 18 427 22 433 5.49e-21 95.9
Msa0684440 MtrunA17_Chr3g0092031 33.143 175 105 5 258 426 5 173 1.40e-20 89.7
Msa0684440 MtrunA17_Chr5g0427571 29.075 227 140 5 214 425 53 273 5.28e-20 90.1
Msa0684440 MtrunA17_Chr8g0357361 29.167 192 127 4 205 392 63 249 5.34e-20 89.7
Msa0684440 MtrunA17_Chr5g0426411 35.429 175 94 6 2 163 6 174 5.76e-20 87.0
Msa0684440 MtrunA17_Chr1g0196851 23.095 433 271 13 18 417 59 462 1.01e-17 85.5
Msa0684440 MtrunA17_Chr6g0453941 27.508 309 153 11 10 307 13 261 1.20e-17 82.8
Msa0684440 MtrunA17_Chr4g0040691 24.460 417 248 17 18 402 18 399 1.35e-17 84.7
Msa0684440 MtrunA17_Chr4g0040711 24.494 445 247 19 18 408 18 427 4.72e-17 83.2
Msa0684440 MtrunA17_Chr2g0283041 26.364 220 146 7 205 418 211 420 2.85e-16 80.9
Msa0684440 MtrunA17_Chr4g0029151 24.541 436 258 13 18 417 30 430 3.06e-16 80.9
Msa0684440 MtrunA17_Chr6g0454391 45.161 62 34 0 346 407 13 74 3.62e-14 68.9
Msa0684440 MtrunA17_Chr6g0454281 33.333 168 93 4 10 162 12 175 9.34e-14 70.5
Msa0684440 MtrunA17_Chr6g0454111 29.480 173 99 7 145 299 16 183 2.45e-11 62.8
Msa0684440 MtrunA17_Chr7g0243731 42.029 69 39 1 326 393 4 72 4.14e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684440 AT3G46670.1 44.105 458 240 8 2 452 3 451 1.42e-126 375
Msa0684440 AT3G46660.1 44.783 460 236 9 2 452 8 458 1.46e-122 365
Msa0684440 AT5G59590.1 43.584 452 240 9 2 446 3 446 4.33e-121 361
Msa0684440 AT3G11340.1 43.886 458 240 10 1 452 1 447 1.42e-119 357
Msa0684440 AT5G59580.1 42.358 458 249 8 2 453 3 451 3.96e-119 356
Msa0684440 AT5G05870.1 43.640 456 248 7 1 449 1 454 5.13e-117 351
Msa0684440 AT5G05880.1 42.544 456 253 5 1 452 1 451 1.09e-116 350
Msa0684440 AT2G26480.1 43.107 457 239 10 3 450 2 446 1.41e-116 349
Msa0684440 AT3G46680.1 42.920 452 239 10 4 446 5 446 1.14e-115 347
Msa0684440 AT3G46700.1 42.035 452 240 9 6 449 7 444 1.42e-115 347
Msa0684440 AT5G38010.1 43.267 453 245 8 4 449 6 453 6.50e-115 345
Msa0684440 AT3G46720.1 43.556 450 232 9 6 449 7 440 5.78e-113 340
Msa0684440 AT5G38040.1 44.292 438 228 8 17 447 19 447 5.96e-113 340
Msa0684440 AT3G46650.1 41.324 438 230 7 4 438 6 419 2.37e-112 338
Msa0684440 AT5G05860.1 42.105 456 251 8 2 452 3 450 6.16e-112 337
Msa0684440 AT3G46690.1 42.794 451 243 9 6 449 7 449 8.88e-112 337
Msa0684440 AT5G05890.1 41.394 459 258 7 1 452 1 455 9.86e-109 329
Msa0684440 AT5G05900.1 41.357 457 250 7 1 449 1 447 1.67e-106 323
Msa0684440 AT3G55700.1 38.330 467 261 10 1 453 1 454 3.19e-105 320
Msa0684440 AT3G55710.1 40.506 474 245 14 1 453 1 458 2.09e-100 308
Msa0684440 AT1G22360.1 33.913 460 253 11 6 428 8 453 4.75e-84 266
Msa0684440 AT1G22400.1 33.921 454 256 10 6 425 11 454 4.27e-82 262
Msa0684440 AT1G22380.1 32.091 483 282 11 4 450 9 481 6.89e-81 258
Msa0684440 AT1G22340.1 32.727 495 283 14 1 454 1 486 2.59e-77 249
Msa0684440 AT1G22360.2 33.043 460 255 12 6 428 8 451 7.60e-77 248
Msa0684440 AT5G37950.1 40.625 352 195 7 23 369 1 343 1.69e-76 243
Msa0684440 AT5G37950.2 39.828 349 196 6 23 369 1 337 2.13e-74 237
Msa0684440 AT1G22370.2 34.829 468 256 13 6 438 11 464 2.83e-74 241
Msa0684440 AT1G78270.1 33.263 475 273 14 12 451 17 482 6.95e-71 233
Msa0684440 AT1G05680.1 30.736 462 277 16 9 446 7 449 5.85e-55 189
Msa0684440 AT3G50740.1 31.780 472 271 13 5 441 4 459 3.56e-54 188
Msa0684440 AT2G36770.1 28.827 503 291 19 1 450 1 489 7.41e-54 187
Msa0684440 AT2G28080.1 30.263 456 285 14 12 445 22 466 1.07e-53 187
Msa0684440 AT2G36780.1 29.167 504 292 16 1 452 1 491 7.87e-53 185
Msa0684440 AT4G15500.1 30.635 457 261 14 1 428 3 432 9.03e-53 184
Msa0684440 AT1G05675.1 30.519 462 278 16 9 446 7 449 1.31e-51 181
Msa0684440 AT2G36970.1 30.998 471 284 16 9 449 11 470 2.56e-51 181
Msa0684440 AT2G36750.1 29.317 498 294 16 1 452 1 486 6.82e-51 180
Msa0684440 AT5G17050.1 28.238 471 298 16 3 452 8 459 8.32e-51 179
Msa0684440 AT2G31790.1 28.723 470 294 14 1 446 1 453 1.22e-49 176
Msa0684440 AT4G15550.1 29.289 478 277 15 9 446 14 470 1.91e-49 175
Msa0684440 AT4G15480.1 28.017 464 287 16 9 440 20 468 6.76e-49 174
Msa0684440 AT2G23250.1 28.261 460 284 13 11 449 1 435 2.03e-48 172
Msa0684440 AT4G01070.1 28.630 489 272 16 2 443 3 461 3.64e-48 172
Msa0684440 AT4G15490.1 28.085 470 284 14 5 438 4 455 7.34e-48 171
Msa0684440 AT1G22370.1 38.621 290 149 9 169 438 14 294 8.95e-48 167
Msa0684440 AT4G14090.1 28.419 468 288 14 3 446 8 452 9.02e-48 171
Msa0684440 AT2G36760.1 30.217 460 268 18 9 426 15 463 1.23e-47 171
Msa0684440 AT5G17040.1 28.246 439 282 12 25 452 26 442 1.33e-47 170
Msa0684440 AT3G21560.1 27.197 478 298 16 9 453 13 473 4.16e-47 169
Msa0684440 AT5G26310.1 29.707 478 265 16 5 438 4 454 4.88e-47 169
Msa0684440 AT1G24100.1 31.078 473 274 16 4 447 7 456 5.17e-47 169
Msa0684440 AT1G05560.1 29.139 453 283 13 9 440 6 441 5.71e-47 169
Msa0684440 AT2G43820.1 29.258 458 275 15 6 440 5 436 6.77e-47 168
Msa0684440 AT5G66690.1 30.407 467 276 16 5 438 4 454 9.61e-47 168
Msa0684440 AT1G05560.2 29.139 453 283 13 9 440 56 491 1.84e-46 168
Msa0684440 AT3G02100.1 27.579 475 291 15 6 451 11 461 1.97e-46 167
Msa0684440 AT2G31750.1 27.729 458 265 13 1 427 1 423 4.99e-46 166
Msa0684440 AT2G31750.2 28.256 453 269 14 1 427 1 423 7.56e-46 166
Msa0684440 AT2G23260.1 28.361 476 286 18 2 449 5 453 1.31e-45 165
Msa0684440 AT2G30140.1 28.298 470 293 11 4 453 10 455 2.86e-45 164
Msa0684440 AT2G43840.1 30.556 468 260 23 4 440 3 436 4.17e-45 163
Msa0684440 AT2G30140.2 28.358 469 293 11 4 453 10 454 5.08e-45 163
Msa0684440 AT2G36800.1 29.522 481 283 18 17 452 21 490 1.14e-44 163
Msa0684440 AT2G43840.2 30.556 468 260 23 4 440 3 436 1.36e-44 162
Msa0684440 AT5G17030.1 29.459 370 233 10 99 453 103 459 2.51e-44 161
Msa0684440 AT3G53160.1 28.750 480 280 17 9 441 9 473 5.52e-44 161
Msa0684440 AT5G03490.1 30.208 480 269 18 2 447 13 460 2.72e-43 159
Msa0684440 AT2G30150.1 27.837 467 277 16 15 452 4 439 6.19e-43 157
Msa0684440 AT2G30150.2 27.673 477 284 17 5 452 11 455 6.56e-43 157
Msa0684440 AT1G05530.1 28.051 467 294 14 9 450 6 455 1.03e-42 157
Msa0684440 AT5G12890.1 29.522 481 292 16 2 443 3 475 1.31e-42 157
Msa0684440 AT2G36790.1 29.485 485 277 20 17 452 22 490 2.63e-42 156
Msa0684440 AT1G01420.2 28.918 453 284 17 2 428 6 446 2.26e-41 154
Msa0684440 AT1G01420.1 28.918 453 284 17 2 428 3 443 2.45e-41 154
Msa0684440 AT4G34131.1 24.798 496 313 13 1 451 1 481 3.29e-41 153
Msa0684440 AT3G16520.3 30.328 366 207 17 109 447 113 457 4.38e-41 152
Msa0684440 AT3G16520.1 29.330 358 207 16 109 441 113 449 1.14e-40 151
Msa0684440 AT1G30530.1 28.371 356 234 10 106 452 110 453 1.39e-40 151
Msa0684440 AT5G17040.2 33.600 250 154 5 206 452 100 340 2.49e-40 147
Msa0684440 AT3G16520.2 30.581 327 186 14 109 411 113 422 2.34e-39 147
Msa0684440 AT2G29740.1 27.459 488 289 17 1 446 1 465 2.62e-39 148
Msa0684440 AT2G15490.3 26.611 481 291 16 17 453 16 478 4.27e-39 147
Msa0684440 AT1G10400.1 29.360 453 258 18 1 417 1 427 5.30e-39 147
Msa0684440 AT1G51210.1 29.841 439 248 17 15 426 27 432 1.33e-38 145
Msa0684440 AT2G15480.1 25.200 500 308 18 1 453 1 481 3.21e-38 145
Msa0684440 AT4G34138.1 26.477 457 295 12 17 440 20 468 5.23e-38 144
Msa0684440 AT2G15490.1 26.240 484 292 16 17 453 16 481 9.64e-38 144
Msa0684440 AT3G22250.1 27.511 458 280 16 1 427 1 437 1.07e-37 143
Msa0684440 AT2G29730.1 27.463 477 298 18 9 453 6 466 1.08e-37 143
Msa0684440 AT3G53150.1 28.947 418 254 14 6 392 20 425 1.44e-37 144
Msa0684440 AT4G34135.1 25.771 454 285 16 1 413 1 443 1.47e-37 143
Msa0684440 AT2G15480.2 25.294 510 305 20 1 453 1 491 3.48e-37 142
Msa0684440 AT2G18570.1 29.087 471 283 21 7 442 5 459 2.02e-36 140
Msa0684440 AT4G36770.1 34.538 249 133 7 201 427 199 439 2.67e-36 139
Msa0684440 AT2G29750.1 27.152 453 271 14 1 411 1 436 8.66e-36 138
Msa0684440 AT3G21790.1 27.981 411 232 12 89 453 94 486 9.14e-36 138
Msa0684440 AT4G15280.1 27.140 479 303 13 9 450 5 474 1.11e-35 138
Msa0684440 AT4G15280.2 27.140 479 303 13 9 450 37 506 1.68e-35 138
Msa0684440 AT1G01390.1 28.450 471 268 17 2 430 3 446 3.01e-35 137
Msa0684440 AT1G01390.2 28.450 471 268 17 2 430 20 463 3.81e-35 137
Msa0684440 AT1G07250.1 29.132 357 196 10 89 411 101 434 7.60e-35 135
Msa0684440 AT3G21760.1 27.292 480 292 13 9 442 5 473 2.14e-34 134
Msa0684440 AT3G21800.1 26.572 493 297 18 6 449 3 479 3.26e-34 134
Msa0684440 AT5G14860.1 28.056 499 281 23 1 447 1 473 4.83e-34 134
Msa0684440 AT3G21780.1 27.754 472 298 15 9 447 5 466 8.37e-34 132
Msa0684440 AT4G15260.1 29.428 367 213 11 117 450 2 355 1.82e-33 129
Msa0684440 AT2G18560.1 34.694 245 129 7 205 427 117 352 3.64e-33 129
Msa0684440 AT5G49690.1 28.251 446 258 14 18 431 20 435 4.10e-33 130
Msa0684440 AT1G07260.1 29.975 397 212 13 47 411 71 433 9.98e-33 129
Msa0684440 AT1G73880.1 26.305 479 297 20 10 454 15 471 2.15e-32 129
Msa0684440 AT2G29710.1 27.579 475 298 17 8 451 5 464 2.63e-32 128
Msa0684440 AT5G65550.1 25.336 446 277 13 18 430 19 441 1.67e-30 123
Msa0684440 AT3G21750.1 25.506 494 287 17 9 450 5 469 7.29e-30 121
Msa0684440 AT2G16890.2 26.316 494 288 19 1 447 1 465 1.22e-29 121
Msa0684440 AT2G16890.3 27.506 429 245 17 1 392 1 400 2.09e-28 116
Msa0684440 AT1G07240.1 27.226 393 252 13 82 451 96 477 5.45e-28 116
Msa0684440 AT4G27570.1 25.000 428 269 16 18 426 17 411 3.14e-21 96.3
Msa0684440 AT4G27560.1 24.942 433 277 16 18 435 17 416 1.52e-20 94.4
Msa0684440 AT1G64910.1 24.566 403 250 14 18 402 16 382 1.83e-20 94.0
Msa0684440 AT5G54010.1 25.879 398 257 14 18 402 16 388 1.12e-18 88.6
Msa0684440 AT5G53990.1 23.951 405 250 11 18 402 16 382 1.74e-18 87.8
Msa0684440 AT1G64920.1 24.263 441 269 15 18 435 16 414 4.83e-18 86.7
Msa0684440 AT2G22590.1 28.205 234 135 8 215 431 233 450 9.80e-18 85.9
Msa0684440 AT4G01070.2 25.360 347 196 13 2 316 3 318 1.37e-17 84.3
Msa0684440 AT3G29630.1 24.938 401 255 13 18 403 16 385 6.31e-17 83.2
Msa0684440 AT4G09500.2 23.846 390 255 11 18 393 16 377 3.43e-16 80.9
Msa0684440 AT1G06000.1 24.632 475 279 19 3 446 4 430 5.26e-16 80.5
Msa0684440 AT1G50580.1 24.312 436 277 17 18 430 16 421 7.93e-15 76.6
Msa0684440 AT4G34135.2 24.324 333 215 13 1 303 1 326 1.41e-14 75.1
Msa0684440 AT3G29630.2 24.439 401 231 12 18 403 16 359 6.40e-14 73.9
Msa0684440 AT2G22930.1 23.272 434 285 14 18 431 16 421 6.73e-14 73.9
Msa0684440 AT5G54060.1 25.310 403 235 15 18 385 23 394 4.32e-13 71.6
Msa0684440 AT4G09500.1 23.333 390 232 11 18 393 16 352 8.16e-13 70.5

Find 121 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTTGTCAACCTTATTT+TGG 0.142647 4_4:+47800681 Msa0684440:CDS
GTTGATTTGTCAAATTAAAA+AGG 0.172101 4_4:-47800122 None:intergenic
TTCTGTGTTATATGTAAGTT+TGG 0.192009 4_4:+47800377 Msa0684440:CDS
ACAGAATTGAAGCATGAAAT+TGG 0.193471 4_4:+47800849 Msa0684440:CDS
TCCTCATGTGATGCACTAAA+TGG 0.206841 4_4:+47800888 Msa0684440:CDS
GTAACAGAGAAATTTATTTA+AGG 0.208736 4_4:+47798721 None:intergenic
CAAAATTCTTGGAAGTGATT+TGG 0.212817 4_4:-47799002 None:intergenic
AGCAATATCTACAAAATTCT+TGG 0.228718 4_4:-47799013 None:intergenic
ACCCTCTGATCTCCAAAATA+AGG 0.251562 4_4:-47800693 None:intergenic
GCTTCAATTCTGTTGCTCTT+TGG 0.255564 4_4:-47800839 None:intergenic
ATGAAGCTGTTGGAGGGTTT+TGG 0.256108 4_4:+47800607 Msa0684440:CDS
TTTGTCCTTCATCGATTCTT+TGG 0.260446 4_4:+47799152 Msa0684440:CDS
GGTTAACTTTGTATAGCTTT+TGG 0.280771 4_4:-47800245 None:intergenic
AACACTTTCAATAACACCTT+TGG 0.290070 4_4:+47800170 Msa0684440:CDS
AAAATTCTTGGAAGTGATTT+GGG 0.297761 4_4:-47799001 None:intergenic
AAATAAGGTTGACAAATAAT+TGG 0.298423 4_4:-47800678 None:intergenic
ACTAGTATTGTTAGCATCAT+TGG 0.305191 4_4:-47800298 None:intergenic
ACACCTACTTTAACATCTTC+TGG 0.305501 4_4:-47800531 None:intergenic
GCTTGGTAGCTTTAGTTCCT+TGG 0.342541 4_4:-47799175 None:intergenic
CCATGTTTGGAAGGTGGGTT+TGG 0.350717 4_4:+47800734 Msa0684440:CDS
AATCGCAGCAAGTCCAGTTC+TGG 0.355643 4_4:-47800087 None:intergenic
AAGGGACTTGGTGCCAGAAC+TGG 0.363055 4_4:+47800074 Msa0684440:CDS
GTGGGAGGTTTGTACTATAT+TGG 0.365527 4_4:-47798767 None:intergenic
GGCACCTCAAAGTGAAGTTT+TGG 0.366545 4_4:+47800581 Msa0684440:CDS
AAGGGTGGTTAGAAGACTTA+TGG 0.373991 4_4:+47800791 Msa0684440:CDS
AAGGATCAGGGGAATTGAAA+TGG 0.377470 4_4:-47798927 None:intergenic
ACAGCAGACAAAATTTCCTT+TGG 0.377724 4_4:+47800457 Msa0684440:CDS
CAAGGTTGTTGAGCCATGTT+TGG 0.393614 4_4:+47800721 Msa0684440:CDS
ACACTTTCAATAACACCTTT+GGG 0.400731 4_4:+47800171 Msa0684440:CDS
TTAGGATGATTAGAAGGATC+AGG 0.411557 4_4:-47798940 None:intergenic
CATATTCAATTAACCTTACA+AGG 0.413889 4_4:-47800981 None:intergenic
TTTGGGAAGCATAGCTAGTT+GGG 0.418943 4_4:+47800395 Msa0684440:CDS
TAGAAATTAGGATGATTAGA+AGG 0.426359 4_4:-47798946 None:intergenic
AACTCAAACTAGGCACCGTT+TGG 0.426910 4_4:+47798807 Msa0684440:CDS
AGAGAGGCTGTGTTGTGAAA+TGG 0.428869 4_4:+47800559 Msa0684440:CDS
AAAGTGATAATTGTATATCT+TGG 0.430200 4_4:+47800334 Msa0684440:CDS
CAGCAGACAAAATTTCCTTT+GGG 0.432619 4_4:+47800458 Msa0684440:CDS
ATTAACCTTACAAGGTACTT+AGG 0.432674 4_4:-47800973 None:intergenic
AATCATGTGTAGAGGACCTA+TGG 0.435021 4_4:-47800274 None:intergenic
GTTTGGGAAGCATAGCTAGT+TGG 0.438235 4_4:+47800394 Msa0684440:CDS
ATTGCTTGCATCATCTATGA+TGG 0.440072 4_4:+47799126 Msa0684440:CDS
TTGAGCCATGTTTGGAAGGT+GGG 0.440282 4_4:+47800729 Msa0684440:CDS
GATTTCACAACAAAAGTAAA+GGG 0.443360 4_4:+47800943 Msa0684440:exon
TGTGCCAAAACTTCACTTTG+AGG 0.449664 4_4:-47800585 None:intergenic
TTTGGAAGGTGGGTTTGGAA+TGG 0.450767 4_4:+47800739 Msa0684440:CDS
CAGAATTGAAGCATGAAATT+GGG 0.452258 4_4:+47800850 Msa0684440:CDS
GCCACCATCCTTCATTCAAA+AGG 0.455870 4_4:+47798880 Msa0684440:CDS
AGGATCAGGGGAATTGAAAT+GGG 0.464443 4_4:-47798926 None:intergenic
CTTCATCGATTCTTTGGCCA+AGG 0.471331 4_4:+47799158 Msa0684440:CDS
AATGGTGTAATGTAATAGAA+AGG 0.471709 4_4:+47800757 Msa0684440:CDS
TCTGTGTTATATGTAAGTTT+GGG 0.478228 4_4:+47800378 Msa0684440:CDS
CTAATATCACCACCTTTACA+AGG 0.481870 4_4:+47798832 Msa0684440:CDS
AGATTCAAAGTCAAGGGACT+TGG 0.486018 4_4:+47800062 Msa0684440:intron
GAGAGGCTGTGTTGTGAAAT+GGG 0.505584 4_4:+47800560 Msa0684440:CDS
GAACACCTAAGTACCTTGTA+AGG 0.513311 4_4:+47800968 Msa0684440:three_prime_UTR
TAGGATGATTAGAAGGATCA+GGG 0.514325 4_4:-47798939 None:intergenic
TGATTTCACAACAAAAGTAA+AGG 0.517067 4_4:+47800942 Msa0684440:exon
AAAGTGCGTATCTTCACTTA+AGG 0.517642 4_4:+47799050 Msa0684440:CDS
TAGAAAGGGATGAGATTGAA+AGG 0.527792 4_4:+47800772 Msa0684440:CDS
TTGCCAGAAGATGTTAAAGT+AGG 0.529974 4_4:+47800528 Msa0684440:CDS
AAATTAGCAAATGAAAATCA+TGG 0.533726 4_4:+47799096 Msa0684440:CDS
ACAGAGAAATTTATTTAAGG+AGG 0.534500 4_4:+47798724 None:intergenic
AAGGGATGAGATTGAAAGGG+TGG 0.538244 4_4:+47800776 Msa0684440:CDS
ATCATGTGTAGAGGACCTAT+GGG 0.538887 4_4:-47800273 None:intergenic
AGACTTATGGTGAATTCAGA+AGG 0.539135 4_4:+47800804 Msa0684440:CDS
CCAAACCCACCTTCCAAACA+TGG 0.541153 4_4:-47800734 None:intergenic
GTTGAGCCATGTTTGGAAGG+TGG 0.541502 4_4:+47800728 Msa0684440:CDS
GGAGTTATGTGGCCTTGTAA+AGG 0.543909 4_4:-47798844 None:intergenic
TGGCACATGAAGCTGTTGGA+GGG 0.545267 4_4:+47800601 Msa0684440:CDS
TGAAATTGGGATAGCTGTGA+AGG 0.553273 4_4:+47800863 Msa0684440:CDS
TTGGCACATGAAGCTGTTGG+AGG 0.555816 4_4:+47800600 Msa0684440:CDS
ATGGGTGTGTGCTATGGTGA+TGG 0.557058 4_4:-47798908 None:intergenic
GTGGTTCGAAAGACTATGCT+TGG 0.557067 4_4:-47799192 None:intergenic
TTAGATAAACCATCGGAGAA+AGG 0.558570 4_4:-47798976 None:intergenic
TGAAACATCGTTGATTGACT+CGG 0.559017 4_4:-47800490 None:intergenic
CCTCATGTGATGCACTAAAT+GGG 0.564340 4_4:+47800889 Msa0684440:CDS
AGAAAGGGATGAGATTGAAA+GGG 0.564711 4_4:+47800773 Msa0684440:CDS
GTAGAGGACCTATGGGGAAG+AGG 0.568003 4_4:-47800266 None:intergenic
AAAGGTTACCTTCCATTGCA+AGG 0.569834 4_4:+47799264 Msa0684440:CDS
GTTGTTGAGCCATGTTTGGA+AGG 0.575186 4_4:+47800725 Msa0684440:CDS
AGGTATTACCTTGCAATGGA+AGG 0.578217 4_4:-47799272 None:intergenic
ATTGAAATGGGTGTGTGCTA+TGG 0.578704 4_4:-47798914 None:intergenic
TACATTGGAGAGTTTGTGTG+AGG 0.580087 4_4:+47800650 Msa0684440:CDS
AAAGTTAACCTCTTCCCCAT+AGG 0.583136 4_4:+47800258 Msa0684440:CDS
GAAACATCGTTGATTGACTC+GGG 0.585002 4_4:-47800489 None:intergenic
ATGGTGGCTAGTTGAAGCAT+AGG 0.588164 4_4:-47798865 None:intergenic
GACTTATGGTGAATTCAGAA+GGG 0.596627 4_4:+47800805 Msa0684440:CDS
AGTTGATGGAAACTCAAACT+AGG 0.597917 4_4:+47798797 Msa0684440:exon
CTGTGGTTGGAATTCTACAT+TGG 0.598732 4_4:+47800635 Msa0684440:CDS
TATGACAGATTCAAAGTCAA+GGG 0.598856 4_4:+47800056 Msa0684440:intron
GAGCTAACTGAAGTTGCTTG+TGG 0.601046 4_4:+47800426 Msa0684440:CDS
GAGATCAGAGGGTAAATGCA+AGG 0.602462 4_4:+47800703 Msa0684440:CDS
AGTAAGGTATTACCTTGCAA+TGG 0.604211 4_4:-47799276 None:intergenic
ATGGTGTAATGTAATAGAAA+GGG 0.605575 4_4:+47800758 Msa0684440:CDS
GAGTAAATTAGTAGCACTAG+TGG 0.606313 4_4:-47799211 None:intergenic
ACTATATTGGTCAATACTTG+CGG 0.607081 4_4:-47798754 None:intergenic
GTTGAAGCATAGGAGTTATG+TGG 0.608795 4_4:-47798855 None:intergenic
CCCATTTAGTGCATCACATG+AGG 0.610628 4_4:-47800889 None:intergenic
AAAGTAGGTGTAGCTGAGAG+AGG 0.613211 4_4:+47800543 Msa0684440:CDS
GTATGACAGATTCAAAGTCA+AGG 0.617752 4_4:+47800055 Msa0684440:intron
CTTGGCCAAAGAATCGATGA+AGG 0.627855 4_4:-47799157 None:intergenic
TGTCTTCAACTACAAAGCAA+AGG 0.629088 4_4:+47799246 Msa0684440:CDS
TTGGGTATTAGATAAACCAT+CGG 0.634193 4_4:-47798983 None:intergenic
AGGATGATTAGAAGGATCAG+GGG 0.634565 4_4:-47798938 None:intergenic
ACATTGGAGAGTTTGTGTGA+GGG 0.636410 4_4:+47800651 Msa0684440:CDS
TTTCACAACAAAAGTAAAGG+GGG 0.637976 4_4:+47800945 Msa0684440:three_prime_UTR
ATTTCACAACAAAAGTAAAG+GGG 0.641128 4_4:+47800944 Msa0684440:exon
TGGTCAATACTTGCGGTACG+CGG 0.642463 4_4:-47798747 None:intergenic
GTTATGTGGCCTTGTAAAGG+TGG 0.644335 4_4:-47798841 None:intergenic
TCATTGGCAATCATGTGTAG+AGG 0.648239 4_4:-47800282 None:intergenic
GAAATTGGGATAGCTGTGAA+GGG 0.652289 4_4:+47800864 Msa0684440:CDS
GTGGTGATATTAGAACCAAA+CGG 0.661629 4_4:-47798822 None:intergenic
ACTTATGGTGAATTCAGAAG+GGG 0.666496 4_4:+47800806 Msa0684440:CDS
ATGTGATGCACTAAATGGGT+TGG 0.678223 4_4:+47800893 Msa0684440:CDS
TTCACAACAAAAGTAAAGGG+GGG 0.680289 4_4:+47800946 Msa0684440:three_prime_UTR
TTTGTAGTTGAAGACACACA+TGG 0.682898 4_4:-47799239 None:intergenic
GGGTGTTATATTCAACACTG+TGG 0.687875 4_4:+47800191 Msa0684440:CDS
ACTCGGGTCGAATAACCCAA+AGG 0.704731 4_4:-47800473 None:intergenic
GTGTTGAATATAACACCCAA+AGG 0.708873 4_4:-47800186 None:intergenic
TCATGTGTAGAGGACCTATG+GGG 0.741563 4_4:-47800272 None:intergenic
CAATCAACGATGTTTCAGCG+TGG 0.755026 4_4:+47800496 Msa0684440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAAATAAATTAGTTTTAT+TGG + chr4_4:47799649-47799668 Msa0684440:intron 10.0%
!!! GTTAAATAAATTAGTTTTAT+TGG + chr4_4:47799649-47799668 Msa0684440:intron 10.0%
!! AAAGGTAAAAAATAGAAATT+AGG - chr4_4:47798961-47798980 None:intergenic 15.0%
!!! TTATATTTTCAATTCATTCA+TGG + chr4_4:47799380-47799399 Msa0684440:intron 15.0%
!!! TATATTTTCAATTCATTCAT+GGG + chr4_4:47799381-47799400 Msa0684440:intron 15.0%
!! AAAAATGAGAATATTTCTTA+TGG + chr4_4:47799480-47799499 Msa0684440:intron 15.0%
!! TCTATCTATCTATATATTAT+TGG - chr4_4:47799740-47799759 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG + chr4_4:47799890-47799909 Msa0684440:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG - chr4_4:47800124-47800143 None:intergenic 15.0%
!!! CTTTAATTAGTTTGTTTTTT+TGG + chr4_4:47801009-47801028 Msa0684440:three_prime_UTR 15.0%
!! AAAGGTAAAAAATAGAAATT+AGG - chr4_4:47798961-47798980 None:intergenic 15.0%
!!! TTATATTTTCAATTCATTCA+TGG + chr4_4:47799380-47799399 Msa0684440:intron 15.0%
!!! TATATTTTCAATTCATTCAT+GGG + chr4_4:47799381-47799400 Msa0684440:intron 15.0%
!! AAAAATGAGAATATTTCTTA+TGG + chr4_4:47799480-47799499 Msa0684440:intron 15.0%
!! TCTATCTATCTATATATTAT+TGG - chr4_4:47799740-47799759 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG + chr4_4:47799890-47799909 Msa0684440:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG - chr4_4:47800124-47800143 None:intergenic 15.0%
!!! CTTTAATTAGTTTGTTTTTT+TGG + chr4_4:47801009-47801028 Msa0684440:three_prime_UTR 15.0%
!! AAATTAGCAAATGAAAATCA+TGG + chr4_4:47799096-47799115 Msa0684440:CDS 20.0%
!! ATCTATCTATATATTATTGG+AGG - chr4_4:47799737-47799756 None:intergenic 20.0%
!! AGCTAAAAAAATTATGGTTA+TGG - chr4_4:47799855-47799874 None:intergenic 20.0%
!! CATACAAGCTAAAAAAATTA+TGG - chr4_4:47799861-47799880 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG - chr4_4:47800123-47800142 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG - chr4_4:47800125-47800144 None:intergenic 20.0%
!! AAAGTGATAATTGTATATCT+TGG + chr4_4:47800334-47800353 Msa0684440:CDS 20.0%
!! AAATAAGGTTGACAAATAAT+TGG - chr4_4:47800681-47800700 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG + chr4_4:47800681-47800700 Msa0684440:CDS 20.0%
!! AAATTAGCAAATGAAAATCA+TGG + chr4_4:47799096-47799115 Msa0684440:CDS 20.0%
!! ATCTATCTATATATTATTGG+AGG - chr4_4:47799737-47799756 None:intergenic 20.0%
!! AGCTAAAAAAATTATGGTTA+TGG - chr4_4:47799855-47799874 None:intergenic 20.0%
!! CATACAAGCTAAAAAAATTA+TGG - chr4_4:47799861-47799880 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG - chr4_4:47800123-47800142 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG - chr4_4:47800125-47800144 None:intergenic 20.0%
!! AAAGTGATAATTGTATATCT+TGG + chr4_4:47800334-47800353 Msa0684440:CDS 20.0%
!! AAATAAGGTTGACAAATAAT+TGG - chr4_4:47800681-47800700 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG + chr4_4:47800681-47800700 Msa0684440:CDS 20.0%
! TAGAAATTAGGATGATTAGA+AGG - chr4_4:47798949-47798968 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG - chr4_4:47799004-47799023 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG - chr4_4:47799016-47799035 None:intergenic 25.0%
! AAAGTCATAAAGTCATAGTA+AGG - chr4_4:47799295-47799314 None:intergenic 25.0%
!!! TTTTCACCAGTTACTTTTTT+TGG + chr4_4:47799319-47799338 Msa0684440:intron 25.0%
! ATTGATCCAAAAAAAGTAAC+TGG - chr4_4:47799328-47799347 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG - chr4_4:47799558-47799577 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG - chr4_4:47799559-47799578 None:intergenic 25.0%
!!! TTTTATTGGTTATTCTTTGC+TGG + chr4_4:47799663-47799682 Msa0684440:intron 25.0%
! TATCTATATATTATTGGAGG+TGG - chr4_4:47799734-47799753 None:intergenic 25.0%
! ATTAAACATGAGGAATCTTT+CGG - chr4_4:47799782-47799801 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG - chr4_4:47799937-47799956 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG + chr4_4:47800377-47800396 Msa0684440:CDS 25.0%
! TCTGTGTTATATGTAAGTTT+GGG + chr4_4:47800378-47800397 Msa0684440:CDS 25.0%
! AATGGTGTAATGTAATAGAA+AGG + chr4_4:47800757-47800776 Msa0684440:CDS 25.0%
! ATGGTGTAATGTAATAGAAA+GGG + chr4_4:47800758-47800777 Msa0684440:CDS 25.0%
! TGATTTCACAACAAAAGTAA+AGG + chr4_4:47800942-47800961 Msa0684440:exon 25.0%
! GATTTCACAACAAAAGTAAA+GGG + chr4_4:47800943-47800962 Msa0684440:exon 25.0%
! ATTTCACAACAAAAGTAAAG+GGG + chr4_4:47800944-47800963 Msa0684440:exon 25.0%
! CATATTCAATTAACCTTACA+AGG - chr4_4:47800984-47801003 None:intergenic 25.0%
! TAGAAATTAGGATGATTAGA+AGG - chr4_4:47798949-47798968 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG - chr4_4:47799004-47799023 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG - chr4_4:47799016-47799035 None:intergenic 25.0%
! AAAGTCATAAAGTCATAGTA+AGG - chr4_4:47799295-47799314 None:intergenic 25.0%
!!! TTTTCACCAGTTACTTTTTT+TGG + chr4_4:47799319-47799338 Msa0684440:intron 25.0%
! ATTGATCCAAAAAAAGTAAC+TGG - chr4_4:47799328-47799347 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG - chr4_4:47799558-47799577 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG - chr4_4:47799559-47799578 None:intergenic 25.0%
!!! TTTTATTGGTTATTCTTTGC+TGG + chr4_4:47799663-47799682 Msa0684440:intron 25.0%
! TATCTATATATTATTGGAGG+TGG - chr4_4:47799734-47799753 None:intergenic 25.0%
! ATTAAACATGAGGAATCTTT+CGG - chr4_4:47799782-47799801 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG - chr4_4:47799937-47799956 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG + chr4_4:47800377-47800396 Msa0684440:CDS 25.0%
! TCTGTGTTATATGTAAGTTT+GGG + chr4_4:47800378-47800397 Msa0684440:CDS 25.0%
! AATGGTGTAATGTAATAGAA+AGG + chr4_4:47800757-47800776 Msa0684440:CDS 25.0%
! ATGGTGTAATGTAATAGAAA+GGG + chr4_4:47800758-47800777 Msa0684440:CDS 25.0%
! TGATTTCACAACAAAAGTAA+AGG + chr4_4:47800942-47800961 Msa0684440:exon 25.0%
! GATTTCACAACAAAAGTAAA+GGG + chr4_4:47800943-47800962 Msa0684440:exon 25.0%
! ATTTCACAACAAAAGTAAAG+GGG + chr4_4:47800944-47800963 Msa0684440:exon 25.0%
! CATATTCAATTAACCTTACA+AGG - chr4_4:47800984-47801003 None:intergenic 25.0%
ACTATATTGGTCAATACTTG+CGG - chr4_4:47798757-47798776 None:intergenic 30.0%
!!! TTCCATCAACTTTTTTTGGT+GGG - chr4_4:47798788-47798807 None:intergenic 30.0%
!!! TTTCCATCAACTTTTTTTGG+TGG - chr4_4:47798789-47798808 None:intergenic 30.0%
!!! GAGTTTCCATCAACTTTTTT+TGG - chr4_4:47798792-47798811 None:intergenic 30.0%
!!! TATTTTTTACCTTTCTCCGA+TGG + chr4_4:47798967-47798986 Msa0684440:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG - chr4_4:47798986-47799005 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG - chr4_4:47799005-47799024 None:intergenic 30.0%
! ACTCTATCATTTTCCTTAAG+AGG + chr4_4:47799602-47799621 Msa0684440:intron 30.0%
! CTCTATCATTTTCCTTAAGA+GGG + chr4_4:47799603-47799622 Msa0684440:intron 30.0%
TATATTATTGGAGGTGGAAT+TGG - chr4_4:47799728-47799747 None:intergenic 30.0%
TTAAACATGAGGAATCTTTC+GGG - chr4_4:47799781-47799800 None:intergenic 30.0%
TATGACAGATTCAAAGTCAA+GGG + chr4_4:47800056-47800075 Msa0684440:intron 30.0%
AACACTTTCAATAACACCTT+TGG + chr4_4:47800170-47800189 Msa0684440:CDS 30.0%
ACACTTTCAATAACACCTTT+GGG + chr4_4:47800171-47800190 Msa0684440:CDS 30.0%
! GGTTAACTTTGTATAGCTTT+TGG - chr4_4:47800248-47800267 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG - chr4_4:47800301-47800320 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG + chr4_4:47800849-47800868 Msa0684440:CDS 30.0%
CAGAATTGAAGCATGAAATT+GGG + chr4_4:47800850-47800869 Msa0684440:CDS 30.0%
TTTCACAACAAAAGTAAAGG+GGG + chr4_4:47800945-47800964 Msa0684440:three_prime_UTR 30.0%
! ATTAACCTTACAAGGTACTT+AGG - chr4_4:47800976-47800995 None:intergenic 30.0%
ACTATATTGGTCAATACTTG+CGG - chr4_4:47798757-47798776 None:intergenic 30.0%
!!! TTCCATCAACTTTTTTTGGT+GGG - chr4_4:47798788-47798807 None:intergenic 30.0%
!!! TTTCCATCAACTTTTTTTGG+TGG - chr4_4:47798789-47798808 None:intergenic 30.0%
!!! GAGTTTCCATCAACTTTTTT+TGG - chr4_4:47798792-47798811 None:intergenic 30.0%
!!! TATTTTTTACCTTTCTCCGA+TGG + chr4_4:47798967-47798986 Msa0684440:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG - chr4_4:47798986-47799005 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG - chr4_4:47799005-47799024 None:intergenic 30.0%
! ACTCTATCATTTTCCTTAAG+AGG + chr4_4:47799602-47799621 Msa0684440:intron 30.0%
! CTCTATCATTTTCCTTAAGA+GGG + chr4_4:47799603-47799622 Msa0684440:intron 30.0%
TATATTATTGGAGGTGGAAT+TGG - chr4_4:47799728-47799747 None:intergenic 30.0%
TTAAACATGAGGAATCTTTC+GGG - chr4_4:47799781-47799800 None:intergenic 30.0%
TATGACAGATTCAAAGTCAA+GGG + chr4_4:47800056-47800075 Msa0684440:intron 30.0%
AACACTTTCAATAACACCTT+TGG + chr4_4:47800170-47800189 Msa0684440:CDS 30.0%
ACACTTTCAATAACACCTTT+GGG + chr4_4:47800171-47800190 Msa0684440:CDS 30.0%
! GGTTAACTTTGTATAGCTTT+TGG - chr4_4:47800248-47800267 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG - chr4_4:47800301-47800320 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG + chr4_4:47800849-47800868 Msa0684440:CDS 30.0%
CAGAATTGAAGCATGAAATT+GGG + chr4_4:47800850-47800869 Msa0684440:CDS 30.0%
TTTCACAACAAAAGTAAAGG+GGG + chr4_4:47800945-47800964 Msa0684440:three_prime_UTR 30.0%
! ATTAACCTTACAAGGTACTT+AGG - chr4_4:47800976-47800995 None:intergenic 30.0%
!! AGTTGATGGAAACTCAAACT+AGG + chr4_4:47798797-47798816 Msa0684440:exon 35.0%
GTGGTGATATTAGAACCAAA+CGG - chr4_4:47798825-47798844 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG + chr4_4:47798832-47798851 Msa0684440:CDS 35.0%
! GAAACCTTTTGAATGAAGGA+TGG - chr4_4:47798887-47798906 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG - chr4_4:47798891-47798910 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG - chr4_4:47798942-47798961 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG - chr4_4:47798943-47798962 None:intergenic 35.0%
TTAGATAAACCATCGGAGAA+AGG - chr4_4:47798979-47798998 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG + chr4_4:47799050-47799069 Msa0684440:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG + chr4_4:47799126-47799145 Msa0684440:CDS 35.0%
!! TTTGTCCTTCATCGATTCTT+TGG + chr4_4:47799152-47799171 Msa0684440:CDS 35.0%
GAGTAAATTAGTAGCACTAG+TGG - chr4_4:47799214-47799233 None:intergenic 35.0%
TTTGTAGTTGAAGACACACA+TGG - chr4_4:47799242-47799261 None:intergenic 35.0%
TGTCTTCAACTACAAAGCAA+AGG + chr4_4:47799246-47799265 Msa0684440:CDS 35.0%
! AGTAAGGTATTACCTTGCAA+TGG - chr4_4:47799279-47799298 None:intergenic 35.0%
ATTTGTACACACCCATACAT+GGG + chr4_4:47799439-47799458 Msa0684440:intron 35.0%
AGCAGAAAATTCCCATGTAT+GGG - chr4_4:47799453-47799472 None:intergenic 35.0%
GATAGAGTCGTGTAAACATA+TGG - chr4_4:47799590-47799609 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG + chr4_4:47799697-47799716 Msa0684440:intron 35.0%
CTTCAAGCTCATTAAACATG+AGG - chr4_4:47799792-47799811 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG + chr4_4:47799907-47799926 Msa0684440:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG + chr4_4:47800055-47800074 Msa0684440:intron 35.0%
GTGTTGAATATAACACCCAA+AGG - chr4_4:47800189-47800208 None:intergenic 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG - chr4_4:47800242-47800261 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG + chr4_4:47800457-47800476 Msa0684440:CDS 35.0%
CAGCAGACAAAATTTCCTTT+GGG + chr4_4:47800458-47800477 Msa0684440:CDS 35.0%
! TGAAACATCGTTGATTGACT+CGG - chr4_4:47800493-47800512 None:intergenic 35.0%
TTGCCAGAAGATGTTAAAGT+AGG + chr4_4:47800528-47800547 Msa0684440:CDS 35.0%
ACACCTACTTTAACATCTTC+TGG - chr4_4:47800534-47800553 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG + chr4_4:47800691-47800710 Msa0684440:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG + chr4_4:47800692-47800711 Msa0684440:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG + chr4_4:47800772-47800791 Msa0684440:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG + chr4_4:47800773-47800792 Msa0684440:CDS 35.0%
AGACTTATGGTGAATTCAGA+AGG + chr4_4:47800804-47800823 Msa0684440:CDS 35.0%
GACTTATGGTGAATTCAGAA+GGG + chr4_4:47800805-47800824 Msa0684440:CDS 35.0%
ACTTATGGTGAATTCAGAAG+GGG + chr4_4:47800806-47800825 Msa0684440:CDS 35.0%
TTCACAACAAAAGTAAAGGG+GGG + chr4_4:47800946-47800965 Msa0684440:three_prime_UTR 35.0%
!! AGTTGATGGAAACTCAAACT+AGG + chr4_4:47798797-47798816 Msa0684440:exon 35.0%
GTGGTGATATTAGAACCAAA+CGG - chr4_4:47798825-47798844 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG + chr4_4:47798832-47798851 Msa0684440:CDS 35.0%
! GAAACCTTTTGAATGAAGGA+TGG - chr4_4:47798887-47798906 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG - chr4_4:47798891-47798910 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG - chr4_4:47798942-47798961 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG - chr4_4:47798943-47798962 None:intergenic 35.0%
TTAGATAAACCATCGGAGAA+AGG - chr4_4:47798979-47798998 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG + chr4_4:47799050-47799069 Msa0684440:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG + chr4_4:47799126-47799145 Msa0684440:CDS 35.0%
!! TTTGTCCTTCATCGATTCTT+TGG + chr4_4:47799152-47799171 Msa0684440:CDS 35.0%
GAGTAAATTAGTAGCACTAG+TGG - chr4_4:47799214-47799233 None:intergenic 35.0%
TTTGTAGTTGAAGACACACA+TGG - chr4_4:47799242-47799261 None:intergenic 35.0%
TGTCTTCAACTACAAAGCAA+AGG + chr4_4:47799246-47799265 Msa0684440:CDS 35.0%
! AGTAAGGTATTACCTTGCAA+TGG - chr4_4:47799279-47799298 None:intergenic 35.0%
ATTTGTACACACCCATACAT+GGG + chr4_4:47799439-47799458 Msa0684440:intron 35.0%
AGCAGAAAATTCCCATGTAT+GGG - chr4_4:47799453-47799472 None:intergenic 35.0%
GATAGAGTCGTGTAAACATA+TGG - chr4_4:47799590-47799609 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG + chr4_4:47799697-47799716 Msa0684440:intron 35.0%
CTTCAAGCTCATTAAACATG+AGG - chr4_4:47799792-47799811 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG + chr4_4:47799907-47799926 Msa0684440:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG + chr4_4:47800055-47800074 Msa0684440:intron 35.0%
GTGTTGAATATAACACCCAA+AGG - chr4_4:47800189-47800208 None:intergenic 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG - chr4_4:47800242-47800261 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG + chr4_4:47800457-47800476 Msa0684440:CDS 35.0%
CAGCAGACAAAATTTCCTTT+GGG + chr4_4:47800458-47800477 Msa0684440:CDS 35.0%
! TGAAACATCGTTGATTGACT+CGG - chr4_4:47800493-47800512 None:intergenic 35.0%
TTGCCAGAAGATGTTAAAGT+AGG + chr4_4:47800528-47800547 Msa0684440:CDS 35.0%
ACACCTACTTTAACATCTTC+TGG - chr4_4:47800534-47800553 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG + chr4_4:47800691-47800710 Msa0684440:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG + chr4_4:47800692-47800711 Msa0684440:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG + chr4_4:47800772-47800791 Msa0684440:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG + chr4_4:47800773-47800792 Msa0684440:CDS 35.0%
AGACTTATGGTGAATTCAGA+AGG + chr4_4:47800804-47800823 Msa0684440:CDS 35.0%
GACTTATGGTGAATTCAGAA+GGG + chr4_4:47800805-47800824 Msa0684440:CDS 35.0%
ACTTATGGTGAATTCAGAAG+GGG + chr4_4:47800806-47800825 Msa0684440:CDS 35.0%
TTCACAACAAAAGTAAAGGG+GGG + chr4_4:47800946-47800965 Msa0684440:three_prime_UTR 35.0%
GTGGGAGGTTTGTACTATAT+TGG - chr4_4:47798770-47798789 None:intergenic 40.0%
!!! CATCAACTTTTTTTGGTGGG+AGG - chr4_4:47798785-47798804 None:intergenic 40.0%
CTCCCACCAAAAAAAGTTGA+TGG + chr4_4:47798783-47798802 Msa0684440:exon 40.0%
GTTGAAGCATAGGAGTTATG+TGG - chr4_4:47798858-47798877 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG - chr4_4:47798884-47798903 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG - chr4_4:47798917-47798936 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG - chr4_4:47798929-47798948 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG - chr4_4:47798930-47798949 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG - chr4_4:47798941-47798960 None:intergenic 40.0%
AAAGGTTACCTTCCATTGCA+AGG + chr4_4:47799264-47799283 Msa0684440:CDS 40.0%
AGGTATTACCTTGCAATGGA+AGG - chr4_4:47799275-47799294 None:intergenic 40.0%
CATTTGTACACACCCATACA+TGG + chr4_4:47799438-47799457 Msa0684440:intron 40.0%
CAGCAGAAAATTCCCATGTA+TGG - chr4_4:47799454-47799473 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG - chr4_4:47799618-47799637 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG + chr4_4:47800062-47800081 Msa0684440:intron 40.0%
! GGGTGTTATATTCAACACTG+TGG + chr4_4:47800191-47800210 Msa0684440:CDS 40.0%
AAAGTTAACCTCTTCCCCAT+AGG + chr4_4:47800258-47800277 Msa0684440:CDS 40.0%
ATCATGTGTAGAGGACCTAT+GGG - chr4_4:47800276-47800295 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG - chr4_4:47800277-47800296 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG - chr4_4:47800285-47800304 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG + chr4_4:47800395-47800414 Msa0684440:CDS 40.0%
! GAAACATCGTTGATTGACTC+GGG - chr4_4:47800492-47800511 None:intergenic 40.0%
TGTGCCAAAACTTCACTTTG+AGG - chr4_4:47800588-47800607 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG + chr4_4:47800635-47800654 Msa0684440:CDS 40.0%
TACATTGGAGAGTTTGTGTG+AGG + chr4_4:47800650-47800669 Msa0684440:CDS 40.0%
ACATTGGAGAGTTTGTGTGA+GGG + chr4_4:47800651-47800670 Msa0684440:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG - chr4_4:47800696-47800715 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG + chr4_4:47800791-47800810 Msa0684440:CDS 40.0%
GCTTCAATTCTGTTGCTCTT+TGG - chr4_4:47800842-47800861 None:intergenic 40.0%
TGAAATTGGGATAGCTGTGA+AGG + chr4_4:47800863-47800882 Msa0684440:CDS 40.0%
GAAATTGGGATAGCTGTGAA+GGG + chr4_4:47800864-47800883 Msa0684440:CDS 40.0%
TCCTCATGTGATGCACTAAA+TGG + chr4_4:47800888-47800907 Msa0684440:CDS 40.0%
CCTCATGTGATGCACTAAAT+GGG + chr4_4:47800889-47800908 Msa0684440:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG + chr4_4:47800893-47800912 Msa0684440:CDS 40.0%
GAACACCTAAGTACCTTGTA+AGG + chr4_4:47800968-47800987 Msa0684440:three_prime_UTR 40.0%
GTGGGAGGTTTGTACTATAT+TGG - chr4_4:47798770-47798789 None:intergenic 40.0%
!!! CATCAACTTTTTTTGGTGGG+AGG - chr4_4:47798785-47798804 None:intergenic 40.0%
CTCCCACCAAAAAAAGTTGA+TGG + chr4_4:47798783-47798802 Msa0684440:exon 40.0%
GTTGAAGCATAGGAGTTATG+TGG - chr4_4:47798858-47798877 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG - chr4_4:47798884-47798903 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG - chr4_4:47798917-47798936 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG - chr4_4:47798929-47798948 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG - chr4_4:47798930-47798949 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG - chr4_4:47798941-47798960 None:intergenic 40.0%
AAAGGTTACCTTCCATTGCA+AGG + chr4_4:47799264-47799283 Msa0684440:CDS 40.0%
AGGTATTACCTTGCAATGGA+AGG - chr4_4:47799275-47799294 None:intergenic 40.0%
CATTTGTACACACCCATACA+TGG + chr4_4:47799438-47799457 Msa0684440:intron 40.0%
CAGCAGAAAATTCCCATGTA+TGG - chr4_4:47799454-47799473 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG - chr4_4:47799618-47799637 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG + chr4_4:47800062-47800081 Msa0684440:intron 40.0%
! GGGTGTTATATTCAACACTG+TGG + chr4_4:47800191-47800210 Msa0684440:CDS 40.0%
AAAGTTAACCTCTTCCCCAT+AGG + chr4_4:47800258-47800277 Msa0684440:CDS 40.0%
ATCATGTGTAGAGGACCTAT+GGG - chr4_4:47800276-47800295 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG - chr4_4:47800277-47800296 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG - chr4_4:47800285-47800304 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG + chr4_4:47800395-47800414 Msa0684440:CDS 40.0%
! GAAACATCGTTGATTGACTC+GGG - chr4_4:47800492-47800511 None:intergenic 40.0%
TGTGCCAAAACTTCACTTTG+AGG - chr4_4:47800588-47800607 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG + chr4_4:47800635-47800654 Msa0684440:CDS 40.0%
TACATTGGAGAGTTTGTGTG+AGG + chr4_4:47800650-47800669 Msa0684440:CDS 40.0%
ACATTGGAGAGTTTGTGTGA+GGG + chr4_4:47800651-47800670 Msa0684440:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG - chr4_4:47800696-47800715 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG + chr4_4:47800791-47800810 Msa0684440:CDS 40.0%
GCTTCAATTCTGTTGCTCTT+TGG - chr4_4:47800842-47800861 None:intergenic 40.0%
TGAAATTGGGATAGCTGTGA+AGG + chr4_4:47800863-47800882 Msa0684440:CDS 40.0%
GAAATTGGGATAGCTGTGAA+GGG + chr4_4:47800864-47800883 Msa0684440:CDS 40.0%
TCCTCATGTGATGCACTAAA+TGG + chr4_4:47800888-47800907 Msa0684440:CDS 40.0%
CCTCATGTGATGCACTAAAT+GGG + chr4_4:47800889-47800908 Msa0684440:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG + chr4_4:47800893-47800912 Msa0684440:CDS 40.0%
GAACACCTAAGTACCTTGTA+AGG + chr4_4:47800968-47800987 Msa0684440:three_prime_UTR 40.0%
! AACTCAAACTAGGCACCGTT+TGG + chr4_4:47798807-47798826 Msa0684440:CDS 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG - chr4_4:47798844-47798863 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG - chr4_4:47798847-47798866 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG - chr4_4:47798868-47798887 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG + chr4_4:47798880-47798899 Msa0684440:CDS 45.0%
CTTGGCCAAAGAATCGATGA+AGG - chr4_4:47799160-47799179 None:intergenic 45.0%
!! CTTCATCGATTCTTTGGCCA+AGG + chr4_4:47799158-47799177 Msa0684440:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG - chr4_4:47799178-47799197 None:intergenic 45.0%
GTGGTTCGAAAGACTATGCT+TGG - chr4_4:47799195-47799214 None:intergenic 45.0%
AACATGAGGAATCTTTCGGG+AGG - chr4_4:47799778-47799797 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG - chr4_4:47800275-47800294 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG + chr4_4:47800394-47800413 Msa0684440:CDS 45.0%
GAGCTAACTGAAGTTGCTTG+TGG + chr4_4:47800426-47800445 Msa0684440:CDS 45.0%
CAATCAACGATGTTTCAGCG+TGG + chr4_4:47800496-47800515 Msa0684440:CDS 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG + chr4_4:47800543-47800562 Msa0684440:CDS 45.0%
AGAGAGGCTGTGTTGTGAAA+TGG + chr4_4:47800559-47800578 Msa0684440:CDS 45.0%
GAGAGGCTGTGTTGTGAAAT+GGG + chr4_4:47800560-47800579 Msa0684440:CDS 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG + chr4_4:47800581-47800600 Msa0684440:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG + chr4_4:47800597-47800616 Msa0684440:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG + chr4_4:47800607-47800626 Msa0684440:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG + chr4_4:47800703-47800722 Msa0684440:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG + chr4_4:47800721-47800740 Msa0684440:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG + chr4_4:47800725-47800744 Msa0684440:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG + chr4_4:47800729-47800748 Msa0684440:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG + chr4_4:47800739-47800758 Msa0684440:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG + chr4_4:47800776-47800795 Msa0684440:CDS 45.0%
CCCATTTAGTGCATCACATG+AGG - chr4_4:47800892-47800911 None:intergenic 45.0%
! AACTCAAACTAGGCACCGTT+TGG + chr4_4:47798807-47798826 Msa0684440:CDS 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG - chr4_4:47798844-47798863 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG - chr4_4:47798847-47798866 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG - chr4_4:47798868-47798887 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG + chr4_4:47798880-47798899 Msa0684440:CDS 45.0%
CTTGGCCAAAGAATCGATGA+AGG - chr4_4:47799160-47799179 None:intergenic 45.0%
!! CTTCATCGATTCTTTGGCCA+AGG + chr4_4:47799158-47799177 Msa0684440:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG - chr4_4:47799178-47799197 None:intergenic 45.0%
GTGGTTCGAAAGACTATGCT+TGG - chr4_4:47799195-47799214 None:intergenic 45.0%
AACATGAGGAATCTTTCGGG+AGG - chr4_4:47799778-47799797 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG - chr4_4:47800275-47800294 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG + chr4_4:47800394-47800413 Msa0684440:CDS 45.0%
GAGCTAACTGAAGTTGCTTG+TGG + chr4_4:47800426-47800445 Msa0684440:CDS 45.0%
CAATCAACGATGTTTCAGCG+TGG + chr4_4:47800496-47800515 Msa0684440:CDS 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG + chr4_4:47800543-47800562 Msa0684440:CDS 45.0%
AGAGAGGCTGTGTTGTGAAA+TGG + chr4_4:47800559-47800578 Msa0684440:CDS 45.0%
GAGAGGCTGTGTTGTGAAAT+GGG + chr4_4:47800560-47800579 Msa0684440:CDS 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG + chr4_4:47800581-47800600 Msa0684440:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG + chr4_4:47800597-47800616 Msa0684440:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG + chr4_4:47800607-47800626 Msa0684440:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG + chr4_4:47800703-47800722 Msa0684440:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG + chr4_4:47800721-47800740 Msa0684440:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG + chr4_4:47800725-47800744 Msa0684440:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG + chr4_4:47800729-47800748 Msa0684440:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG + chr4_4:47800739-47800758 Msa0684440:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG + chr4_4:47800776-47800795 Msa0684440:CDS 45.0%
CCCATTTAGTGCATCACATG+AGG - chr4_4:47800892-47800911 None:intergenic 45.0%
TGGTCAATACTTGCGGTACG+CGG - chr4_4:47798750-47798769 None:intergenic 50.0%
ATGGGTGTGTGCTATGGTGA+TGG - chr4_4:47798911-47798930 None:intergenic 50.0%
AATCGCAGCAAGTCCAGTTC+TGG - chr4_4:47800090-47800109 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG - chr4_4:47800476-47800495 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG + chr4_4:47800600-47800619 Msa0684440:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG + chr4_4:47800601-47800620 Msa0684440:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG + chr4_4:47800622-47800641 Msa0684440:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG + chr4_4:47800728-47800747 Msa0684440:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG - chr4_4:47800737-47800756 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG + chr4_4:47800734-47800753 Msa0684440:CDS 50.0%
TGGTCAATACTTGCGGTACG+CGG - chr4_4:47798750-47798769 None:intergenic 50.0%
ATGGGTGTGTGCTATGGTGA+TGG - chr4_4:47798911-47798930 None:intergenic 50.0%
AATCGCAGCAAGTCCAGTTC+TGG - chr4_4:47800090-47800109 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG - chr4_4:47800476-47800495 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG + chr4_4:47800600-47800619 Msa0684440:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG + chr4_4:47800601-47800620 Msa0684440:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG + chr4_4:47800622-47800641 Msa0684440:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG + chr4_4:47800728-47800747 Msa0684440:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG - chr4_4:47800737-47800756 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG + chr4_4:47800734-47800753 Msa0684440:CDS 50.0%
!! AAGGGACTTGGTGCCAGAAC+TGG + chr4_4:47800074-47800093 Msa0684440:CDS 55.0%
GTAGAGGACCTATGGGGAAG+AGG - chr4_4:47800269-47800288 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG + chr4_4:47800618-47800637 Msa0684440:CDS 55.0%
!! AAGGGACTTGGTGCCAGAAC+TGG + chr4_4:47800074-47800093 Msa0684440:CDS 55.0%
GTAGAGGACCTATGGGGAAG+AGG - chr4_4:47800269-47800288 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG + chr4_4:47800618-47800637 Msa0684440:CDS 55.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 47798732 47801062 47798732 ID=Msa0684440;Name=Msa0684440
chr4_4 mRNA 47798732 47801062 47798732 ID=Msa0684440-mRNA-1;Parent=Msa0684440;Name=Msa0684440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=70|1|1|1|1|1|2|118|454
chr4_4 exon 47798732 47799285 47798732 ID=Msa0684440-mRNA-1:exon:11809;Parent=Msa0684440-mRNA-1
chr4_4 exon 47800064 47801062 47800064 ID=Msa0684440-mRNA-1:exon:11810;Parent=Msa0684440-mRNA-1
chr4_4 five_prime_UTR 47798732 47798801 47798732 ID=Msa0684440-mRNA-1:five_prime_utr;Parent=Msa0684440-mRNA-1
chr4_4 CDS 47798802 47799285 47798802 ID=Msa0684440-mRNA-1:cds;Parent=Msa0684440-mRNA-1
chr4_4 CDS 47800064 47800944 47800064 ID=Msa0684440-mRNA-1:cds;Parent=Msa0684440-mRNA-1
chr4_4 three_prime_UTR 47800945 47801062 47800945 ID=Msa0684440-mRNA-1:three_prime_utr;Parent=Msa0684440-mRNA-1
Gene Sequence

>Msa0684440

ATGGAAACTCAAACTAGGCACCGTTTGGTTCTAATATCACCACCTTTACAAGGCCACATAACTCCTATGCTTCAACTAGCCACCATCCTTCATTCAAAAGGTTTCTCCATCACCATAGCACACACCCATTTCAATTCCCCTGATCCTTCTAATCATCCTAATTTCTATTTTTTACCTTTCTCCGATGGTTTATCTAATACCCAAATCACTTCCAAGAATTTTGTAGATATTGCTTCAACTCTAAATATAAAGTGCGTATCTTCACTTAAGGAGACATTAGTTCATTATATTACAAAATTAGCAAATGAAAATCATGGTGAAAAAATTGCTTGCATCATCTATGATGGATTTTTGTCCTTCATCGATTCTTTGGCCAAGGAACTAAAGCTACCAAGCATAGTCTTTCGAACCACTAGTGCTACTAATTTACTCACTTACCATGTGTGTCTTCAACTACAAAGCAAAGGTTACCTTCCATTGCAAGATTCAAAGTCAAGGGACTTGGTGCCAGAACTGGACTTGCTGCGATTCAAAGATCTACCCCTTTTTAATTTGACAAATCAACATGATTTTCTACAAAGCATAGCAAAAACACTTTCAATAACACCTTTGGGTGTTATATTCAACACTGTGGAAAGCTTAGAAGATTCATCACTAAACCAACTCCAAAAGCTATACAAAGTTAACCTCTTCCCCATAGGTCCTCTACACATGATTGCCAATGATGCTAACAATACTAGTAGCATTCTGCAAAAAAGTGATAATTGTATATCTTGGCTAAACAACAAAGCAAAAAATTCTGTGTTATATGTAAGTTTGGGAAGCATAGCTAGTTGGGAAGAGAAAGAGCTAACTGAAGTTGCTTGTGGCTTAGTCAACAGCAGACAAAATTTCCTTTGGGTTATTCGACCCGAGTCAATCAACGATGTTTCAGCGTGGTTAGAATCTTTGCCAGAAGATGTTAAAGTAGGTGTAGCTGAGAGAGGCTGTGTTGTGAAATGGGCACCTCAAAGTGAAGTTTTGGCACATGAAGCTGTTGGAGGGTTTTGGAGTCACTGTGGTTGGAATTCTACATTGGAGAGTTTGTGTGAGGGAGTGCCAATTATTTGTCAACCTTATTTTGGAGATCAGAGGGTAAATGCAAGGTTGTTGAGCCATGTTTGGAAGGTGGGTTTGGAATGGTGTAATGTAATAGAAAGGGATGAGATTGAAAGGGTGGTTAGAAGACTTATGGTGAATTCAGAAGGGGAGTTGATGAGCCAAAGAGCAACAGAATTGAAGCATGAAATTGGGATAGCTGTGAAGGGTTCCTCATGTGATGCACTAAATGGGTTGGTAAAGTATATCTTATCACTGAATGTCTGA
Protein sequence

>Msa0684440

METQTRHRLVLISPPLQGHITPMLQLATILHSKGFSITIAHTHFNSPDPSNHPNFYFLPFSDGLSNTQITSKNFVDIASTLNIKCVSSLKETLVHYITKLANENHGEKIACIIYDGFLSFIDSLAKELKLPSIVFRTTSATNLLTYHVCLQLQSKGYLPLQDSKSRDLVPELDLLRFKDLPLFNLTNQHDFLQSIAKTLSITPLGVIFNTVESLEDSSLNQLQKLYKVNLFPIGPLHMIANDANNTSSILQKSDNCISWLNNKAKNSVLYVSLGSIASWEEKELTEVACGLVNSRQNFLWVIRPESINDVSAWLESLPEDVKVGVAERGCVVKWAPQSEVLAHEAVGGFWSHCGWNSTLESLCEGVPIICQPYFGDQRVNARLLSHVWKVGLEWCNVIERDEIERVVRRLMVNSEGELMSQRATELKHEIGIAVKGSSCDALNGLVKYILSLNV*