Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605700 | KEH30445.1 | 79.385 | 325 | 18 | 1 | 1 | 276 | 1 | 325 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605700 | sp|O81355|PYRC5_PYRCO | 48.366 | 306 | 104 | 3 | 3 | 254 | 1 | 306 | 4.11e-100 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605700 | A0A072UX60 | 79.385 | 325 | 18 | 1 | 1 | 276 | 1 | 325 | 0.0 | 512 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0550390 | Msa0605700 | 0.819719 | 1.002171e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605700 | MtrunA17_Chr4g0035111 | 77.576 | 330 | 20 | 3 | 1 | 276 | 1 | 330 | 1.75e-180 | 499 |
| Msa0605700 | MtrunA17_Chr4g0035131 | 51.385 | 325 | 103 | 3 | 1 | 270 | 38 | 362 | 8.46e-110 | 322 |
| Msa0605700 | MtrunA17_Chr3g0144701 | 50.968 | 310 | 96 | 4 | 1 | 254 | 1 | 310 | 6.16e-102 | 300 |
| Msa0605700 | MtrunA17_Chr5g0404471 | 49.667 | 300 | 97 | 2 | 7 | 252 | 6 | 305 | 3.25e-98 | 290 |
| Msa0605700 | MtrunA17_Chr3g0141681 | 46.753 | 308 | 108 | 3 | 3 | 254 | 1 | 308 | 4.00e-92 | 275 |
| Msa0605700 | MtrunA17_Chr3g0141691 | 45.928 | 307 | 110 | 4 | 1 | 253 | 1 | 305 | 1.62e-90 | 270 |
| Msa0605700 | MtrunA17_Chr5g0404481 | 40.063 | 317 | 124 | 5 | 3 | 254 | 1 | 316 | 2.32e-66 | 209 |
| Msa0605700 | MtrunA17_Chr5g0404511 | 39.748 | 317 | 125 | 5 | 3 | 254 | 1 | 316 | 6.21e-66 | 208 |
| Msa0605700 | MtrunA17_Chr4g0035121 | 36.304 | 303 | 137 | 3 | 7 | 253 | 4 | 306 | 3.04e-64 | 203 |
| Msa0605700 | MtrunA17_Chr5g0409641 | 33.225 | 307 | 143 | 3 | 7 | 253 | 4 | 308 | 7.26e-49 | 164 |
| Msa0605700 | MtrunA17_Chr5g0409651 | 32.573 | 307 | 145 | 3 | 7 | 253 | 4 | 308 | 9.26e-48 | 161 |
| Msa0605700 | MtrunA17_Chr3g0078901 | 31.457 | 302 | 147 | 6 | 8 | 254 | 7 | 303 | 7.21e-47 | 159 |
| Msa0605700 | MtrunA17_Chr8g0369391 | 32.899 | 307 | 145 | 4 | 7 | 253 | 4 | 309 | 1.05e-46 | 158 |
| Msa0605700 | MtrunA17_Chr3g0078831 | 31.373 | 306 | 150 | 6 | 4 | 254 | 3 | 303 | 4.11e-45 | 154 |
| Msa0605700 | MtrunA17_Chr1g0198771 | 28.146 | 302 | 160 | 4 | 8 | 253 | 15 | 315 | 4.67e-36 | 131 |
| Msa0605700 | MtrunA17_Chr3g0078941 | 35.119 | 168 | 104 | 3 | 83 | 250 | 43 | 205 | 4.32e-31 | 115 |
| Msa0605700 | MtrunA17_Chr3g0078951 | 48.684 | 76 | 35 | 3 | 8 | 82 | 7 | 79 | 2.28e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605700 | AT4G39230.1 | 48.026 | 304 | 104 | 3 | 5 | 254 | 3 | 306 | 5.82e-94 | 280 |
| Msa0605700 | AT1G75280.1 | 49.669 | 302 | 95 | 4 | 7 | 252 | 6 | 306 | 3.96e-91 | 272 |
| Msa0605700 | AT1G75290.1 | 45.695 | 302 | 108 | 3 | 7 | 252 | 6 | 307 | 6.66e-88 | 265 |
| Msa0605700 | AT1G75290.2 | 45.695 | 302 | 108 | 3 | 7 | 252 | 33 | 334 | 2.44e-87 | 264 |
| Msa0605700 | AT1G75300.1 | 44.969 | 318 | 102 | 5 | 7 | 254 | 6 | 320 | 7.80e-79 | 241 |
| Msa0605700 | AT1G19540.1 | 39.344 | 305 | 127 | 3 | 6 | 252 | 2 | 306 | 6.42e-68 | 213 |
| Msa0605700 | AT4G34540.1 | 38.538 | 301 | 126 | 4 | 7 | 253 | 8 | 303 | 1.93e-65 | 207 |
| Msa0605700 | AT1G19540.2 | 37.795 | 254 | 100 | 3 | 6 | 201 | 2 | 255 | 1.57e-50 | 167 |
| Msa0605700 | AT1G32100.1 | 33.333 | 306 | 142 | 4 | 7 | 252 | 10 | 313 | 3.40e-46 | 157 |
| Msa0605700 | AT4G13660.1 | 31.935 | 310 | 149 | 4 | 4 | 253 | 7 | 314 | 5.87e-43 | 149 |
| Msa0605700 | AT4G13660.2 | 31.935 | 310 | 149 | 4 | 4 | 253 | 7 | 314 | 5.87e-43 | 149 |
Find 78 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAACCAATTTAAGTAAAA+TGG | 0.121188 | 4_2:-51714406 | Msa0605690:intron |
| CTCAATGGCCCTACGAAATT+TGG | 0.190021 | 4_2:-51713256 | Msa0605690:intron |
| GTCACCTTATCCTGTAAATA+TGG | 0.192397 | 4_2:+51714234 | Msa0605700:CDS |
| ACTAGTCAATTTCTTTGTTA+TGG | 0.226126 | 4_2:+51714493 | Msa0605700:three_prime_UTR |
| GCCAGTATATTGTTTAATTA+AGG | 0.226567 | 4_2:+51714466 | Msa0605700:three_prime_UTR |
| CTAGTCAATTTCTTTGTTAT+GGG | 0.269905 | 4_2:+51714494 | Msa0605700:three_prime_UTR |
| ATTGCAAGGCCCATATTTAC+AGG | 0.311260 | 4_2:-51714244 | Msa0605690:intron |
| ACTACAAAGATTCTTGTAAT+AGG | 0.327545 | 4_2:+51710081 | Msa0605700:CDS |
| TTAGATAGACTATTTATTGA+TGG | 0.330975 | 4_2:-51714537 | Msa0605690:intron |
| ACAATGACCTAGTATCTCTT+TGG | 0.331162 | 4_2:+51713743 | Msa0605700:CDS |
| CTTGGGTGTCAACATAGTTT+TGG | 0.336705 | 4_2:+51710233 | Msa0605700:CDS |
| ATCTTCAGTACTTGCTTCTC+TGG | 0.342013 | 4_2:-51713805 | Msa0605690:intron |
| TCTCAATGATATACGAATAA+AGG | 0.351529 | 4_2:+51714631 | Msa0605700:three_prime_UTR |
| TAGATTCAGTTATAATCCTT+GGG | 0.359380 | 4_2:+51713373 | Msa0605700:CDS |
| CACCCAAGGTATTGAAACTT+TGG | 0.363353 | 4_2:-51710218 | Msa0605690:intron |
| ATAACCAATTTAAGTAAAAT+GGG | 0.369317 | 4_2:-51714405 | Msa0605690:intron |
| AGTCTCAATAATTTATTACT+TGG | 0.376285 | 4_2:-51714601 | Msa0605690:intron |
| AGGATTATAACTGAATCTAA+TGG | 0.384287 | 4_2:-51713369 | Msa0605690:intron |
| CAAGGTTCTTGGATCATCAA+TGG | 0.395204 | 4_2:-51713677 | Msa0605690:intron |
| GGCCTTGCAATTTGTCTGGC+TGG | 0.398360 | 4_2:+51714256 | Msa0605700:CDS |
| CACTTTGGATGAGTACTTTG+AGG | 0.399801 | 4_2:+51714366 | Msa0605700:CDS |
| TTAGATTCAGTTATAATCCT+TGG | 0.404938 | 4_2:+51713372 | Msa0605700:CDS |
| TATATACGACCACCAGAGTT+TGG | 0.407580 | 4_2:+51711800 | Msa0605700:CDS |
| ATTCTTGTAATAGGAGGAAC+AGG | 0.414103 | 4_2:+51710090 | Msa0605700:CDS |
| TCCTTAATTAAACAATATAC+TGG | 0.416712 | 4_2:-51714467 | Msa0605690:intron |
| CAATGACCTAGTATCTCTTT+GGG | 0.423107 | 4_2:+51713744 | Msa0605700:CDS |
| ATCCAAAGTTTCAATACCTT+GGG | 0.423977 | 4_2:+51710216 | Msa0605700:CDS |
| TATGGGCCTTGCAATTTGTC+TGG | 0.430083 | 4_2:+51714252 | Msa0605700:CDS |
| CATCCAAAGTTTCAATACCT+TGG | 0.431970 | 4_2:+51710215 | Msa0605700:CDS |
| CGACCACCAGAGTTTGGTTA+AGG | 0.452721 | 4_2:+51711806 | Msa0605700:CDS |
| AGGCCCATATTTACAGGATA+AGG | 0.455077 | 4_2:-51714238 | Msa0605690:intron |
| AAAGTGATATATTTGACATC+AGG | 0.462962 | 4_2:-51714349 | Msa0605690:intron |
| GGTATTGAAACTTTGGATGA+TGG | 0.470946 | 4_2:-51710211 | Msa0605690:intron |
| CAAGTACTGAAGATGATTCA+AGG | 0.474767 | 4_2:+51713814 | Msa0605700:CDS |
| TCACCTTATCCTGTAAATAT+GGG | 0.480725 | 4_2:+51714235 | Msa0605700:CDS |
| TAAAATCAAAACATCAAGCT+TGG | 0.484335 | 4_2:-51714710 | Msa0605690:intron |
| CGTAGGGCCATTGAGGATGA+AGG | 0.491914 | 4_2:+51713264 | Msa0605700:CDS |
| AGTTTGCAACCACATAGGTA+TGG | 0.497796 | 4_2:-51713293 | Msa0605690:intron |
| CAAATTTCGTAGGGCCATTG+AGG | 0.507301 | 4_2:+51713257 | Msa0605700:CDS |
| GGGAATTCCTTCATCCTCAA+TGG | 0.522128 | 4_2:-51713271 | Msa0605690:intron |
| GTTTGCAACCACATAGGTAT+GGG | 0.531410 | 4_2:-51713292 | Msa0605690:intron |
| GTAGTTGTTCCTACAGCCAT+CGG | 0.532196 | 4_2:-51710063 | Msa0605690:intron |
| TGATGTCAAATATATCACTT+TGG | 0.539498 | 4_2:+51714351 | Msa0605700:CDS |
| TATGAAATTGATCCCTCCAC+TGG | 0.542638 | 4_2:+51714304 | Msa0605700:CDS |
| TCAGTTATAATCCTTGGGGA+TGG | 0.549655 | 4_2:+51713378 | Msa0605700:CDS |
| TTATGACCTTAACCAAACTC+TGG | 0.550214 | 4_2:-51711812 | Msa0605690:intron |
| CTTTGGTATTTCCATCCCCA+AGG | 0.552476 | 4_2:-51713389 | Msa0605690:intron |
| CAACACTAATTATCTTCTCT+AGG | 0.554919 | 4_2:+51710025 | Msa0605700:five_prime_UTR |
| ATACAAAGGCCAAATTTCGT+AGG | 0.556729 | 4_2:+51713247 | Msa0605700:intron |
| GTTGAAGCTAGCATTAAAGC+TGG | 0.557955 | 4_2:+51710132 | Msa0605700:CDS |
| CCTCGTATGAGAGCAAAAGT+AGG | 0.562684 | 4_2:-51710159 | Msa0605690:intron |
| TACAAAGGCCAAATTTCGTA+GGG | 0.567897 | 4_2:+51713248 | Msa0605700:intron |
| TCAATAAGTTGTGATTGAGT+TGG | 0.574854 | 4_2:-51713336 | Msa0605690:intron |
| TAAGTTGTGATTGAGTTGGT+AGG | 0.575098 | 4_2:-51713332 | Msa0605690:intron |
| ACAAAGATTCTTGTAATAGG+AGG | 0.577252 | 4_2:+51710084 | Msa0605700:CDS |
| TTCTGAAGCTTCTACTCCAG+TGG | 0.580723 | 4_2:-51714320 | Msa0605690:intron |
| TCTTCTCCCAAAGAGATACT+AGG | 0.582651 | 4_2:-51713750 | Msa0605690:intron |
| ATTGTATGACAATGTGTTCG+TGG | 0.582720 | 4_2:-51713725 | Msa0605690:intron |
| GGTTAAGGTCATAAAGCAAG+TGG | 0.584313 | 4_2:+51711821 | Msa0605700:CDS |
| CTCGTATGAGAGCAAAAGTA+GGG | 0.586027 | 4_2:-51710158 | Msa0605690:intron |
| TGTCTGGCTGGATATGTGAA+TGG | 0.595623 | 4_2:+51714268 | Msa0605700:CDS |
| AATAGGAGGAACAGGTTACG+TGG | 0.596910 | 4_2:+51710098 | Msa0605700:CDS |
| AGATTCAGTTATAATCCTTG+GGG | 0.605745 | 4_2:+51713374 | Msa0605700:CDS |
| CAAAACTATGTTGACACCCA+AGG | 0.607236 | 4_2:-51710232 | Msa0605690:intron |
| CTTGGGGATGGAAATACCAA+AGG | 0.612573 | 4_2:+51713390 | Msa0605700:CDS |
| TGAAGCTTCTACTCCAGTGG+AGG | 0.620290 | 4_2:-51714317 | Msa0605690:intron |
| GAGAAAGTTTGCAACCACAT+AGG | 0.622252 | 4_2:-51713298 | Msa0605690:intron |
| TGGTTATTATCACTTAACAA+AGG | 0.628967 | 4_2:+51714421 | Msa0605700:CDS |
| ATCCAGCCAGACAAATTGCA+AGG | 0.631936 | 4_2:-51714258 | Msa0605690:intron |
| TTGTATGACAATGTGTTCGT+GGG | 0.632280 | 4_2:-51713724 | Msa0605690:intron |
| TGACCTTAACCAAACTCTGG+TGG | 0.638131 | 4_2:-51711809 | Msa0605690:intron |
| AGGAATTCCCCATACCTATG+TGG | 0.644732 | 4_2:+51713284 | Msa0605700:CDS |
| TAACCAATTTAAGTAAAATG+GGG | 0.651754 | 4_2:-51714404 | Msa0605690:intron |
| GAAGCTTCTACTCCAGTGGA+GGG | 0.651967 | 4_2:-51714316 | Msa0605690:intron |
| TATGACAATGTGTTCGTGGG+AGG | 0.672276 | 4_2:-51713721 | Msa0605690:intron |
| TTTGCAACCACATAGGTATG+GGG | 0.684763 | 4_2:-51713291 | Msa0605690:intron |
| TGGATGATGGATGACTTGTG+TGG | 0.692486 | 4_2:-51710198 | Msa0605690:intron |
| ATAGGAGGAACAGGTTACGT+GGG | 0.701959 | 4_2:+51710099 | Msa0605700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTATTTTTTTTTAAA+AGG | + | chr4_2:51710773-51710792 | Msa0605700:intron | 0.0% |
| !!! | AAAAAAGTTTTTTTTATTTG+AGG | - | chr4_2:51711268-51711287 | Msa0605690:intron | 10.0% |
| !! | CAAAAATAACAAAATTTATT+TGG | + | chr4_2:51711495-51711514 | Msa0605700:intron | 10.0% |
| !! | ATAAATCAATAATAATTATG+AGG | - | chr4_2:51711697-51711716 | Msa0605690:intron | 10.0% |
| !!! | TTCTTTTTTATTACTTTTAT+CGG | + | chr4_2:51711969-51711988 | Msa0605700:intron | 10.0% |
| !!! | AAGAACTATATATTTTAATA+AGG | - | chr4_2:51712320-51712339 | Msa0605690:intron | 10.0% |
| !!! | CAAATTTTTTAATAATATGA+TGG | + | chr4_2:51712461-51712480 | Msa0605700:intron | 10.0% |
| !! | AAAATTGTAAAAAAAAATTC+GGG | + | chr4_2:51712873-51712892 | Msa0605700:intron | 10.0% |
| !! | AAAAAAAAAATAATAATCCA+GGG | + | chr4_2:51712925-51712944 | Msa0605700:intron | 10.0% |
| !!! | AAGTAAATTTCTAATTTTAA+AGG | - | chr4_2:51713432-51713451 | Msa0605690:intron | 10.0% |
| !!! | ATAATCCATGAAATTTTTTA+AGG | + | chr4_2:51711118-51711137 | Msa0605700:intron | 15.0% |
| !!! | ACAAAATTTATTTGGTTTAT+TGG | + | chr4_2:51711503-51711522 | Msa0605700:intron | 15.0% |
| !!! | TGAAATTTTATTATCAAAGT+TGG | + | chr4_2:51712146-51712165 | Msa0605700:intron | 15.0% |
| !! | GAAAAAAAAAATAATAATCC+AGG | + | chr4_2:51712924-51712943 | Msa0605700:intron | 15.0% |
| !! | AAAAAAAAATAATAATCCAG+GGG | + | chr4_2:51712926-51712945 | Msa0605700:intron | 15.0% |
| !! | GAAAAACAAATTATAACATA+TGG | - | chr4_2:51713147-51713166 | Msa0605690:intron | 15.0% |
| !!! | TTTTTGTTTATATCTAAAAC+CGG | - | chr4_2:51713469-51713488 | Msa0605690:intron | 15.0% |
| !!! | AATAATTTTTCAAGTAATTG+AGG | + | chr4_2:51713908-51713927 | Msa0605700:intron | 15.0% |
| !! | TTAAGATTATATGCATAATA+AGG | + | chr4_2:51714170-51714189 | Msa0605700:intron | 15.0% |
| !! | ATAACCAATTTAAGTAAAAT+GGG | - | chr4_2:51714408-51714427 | Msa0605690:intron | 15.0% |
| !! | AATAACCAATTTAAGTAAAA+TGG | - | chr4_2:51714409-51714428 | Msa0605690:intron | 15.0% |
| !!! | TGATTTTTTGTAAAAGAAAA+AGG | + | chr4_2:51714661-51714680 | Msa0605700:three_prime_UTR | 15.0% |
| !!! | ATTGCAGCTTTAAAAAAAAA+TGG | - | chr4_2:51710347-51710366 | Msa0605690:intron | 20.0% |
| !! | ATGATAATAAGTGGTTAATT+TGG | - | chr4_2:51710869-51710888 | Msa0605690:intron | 20.0% |
| !! | TTAGTTGACTAAAATAAGAT+AGG | + | chr4_2:51710933-51710952 | Msa0605700:intron | 20.0% |
| !!! | ATATGTATTTTGGTAAACAA+CGG | - | chr4_2:51710991-51711010 | Msa0605690:intron | 20.0% |
| !! | AAAGTCCTTAAAAAATTTCA+TGG | - | chr4_2:51711126-51711145 | Msa0605690:intron | 20.0% |
| !! | GATATCATTTACTAAGTTTA+CGG | - | chr4_2:51711176-51711195 | Msa0605690:intron | 20.0% |
| !! | AACTTAGTAAATGATATCTA+CGG | + | chr4_2:51711178-51711197 | Msa0605700:intron | 20.0% |
| !!! | AACTATTTTGTTGCAATTTT+TGG | + | chr4_2:51711939-51711958 | Msa0605700:intron | 20.0% |
| !!! | CGAAAATTCATACATATTTT+TGG | - | chr4_2:51712190-51712209 | Msa0605690:intron | 20.0% |
| !! | ATACGAAGTAAATACAAAAT+AGG | + | chr4_2:51712528-51712547 | Msa0605700:intron | 20.0% |
| !!! | CTGAAAAAACTGAAATTTTT+CGG | + | chr4_2:51712846-51712865 | Msa0605700:intron | 20.0% |
| !!! | CTGGAAAAAAAAAATTTTGA+AGG | + | chr4_2:51712902-51712921 | Msa0605700:intron | 20.0% |
| !!! | TATGGCTTAAAATATTTTGT+AGG | - | chr4_2:51713129-51713148 | Msa0605690:intron | 20.0% |
| !!! | TAATTTGTTTTTCTATACAG+AGG | + | chr4_2:51713154-51713173 | Msa0605700:intron | 20.0% |
| !! | AACAAAAAGTCAAATATATG+CGG | + | chr4_2:51713481-51713500 | Msa0605700:intron | 20.0% |
| !!! | AATATAGAGAATTTTGTTCA+AGG | - | chr4_2:51713698-51713717 | Msa0605690:intron | 20.0% |
| !!! | AGTATTGATTTATTCATTCA+AGG | + | chr4_2:51713952-51713971 | Msa0605700:intron | 20.0% |
| !! | TAACCAATTTAAGTAAAATG+GGG | - | chr4_2:51714407-51714426 | Msa0605690:intron | 20.0% |
| !! | TCCTTAATTAAACAATATAC+TGG | - | chr4_2:51714470-51714489 | Msa0605690:intron | 20.0% |
| !! | TTAGATAGACTATTTATTGA+TGG | - | chr4_2:51714540-51714559 | Msa0605690:intron | 20.0% |
| !! | AGTCTCAATAATTTATTACT+TGG | - | chr4_2:51714604-51714623 | Msa0605690:intron | 20.0% |
| ! | ACTACAAAGATTCTTGTAAT+AGG | + | chr4_2:51710081-51710100 | Msa0605700:CDS | 25.0% |
| !! | TCTGTGGTTTTCTTTTAAAT+CGG | - | chr4_2:51710421-51710440 | Msa0605690:intron | 25.0% |
| !! | CGAATATTCTTTTATGTGAT+TGG | + | chr4_2:51710472-51710491 | Msa0605700:intron | 25.0% |
| !! | GTTCTTTTGTAAAAATCTCT+CGG | + | chr4_2:51710497-51710516 | Msa0605700:intron | 25.0% |
| ! | AGCTGTAAAATGATAATAAG+TGG | - | chr4_2:51710878-51710897 | Msa0605690:intron | 25.0% |
| ! | GAAACATGGCATTTATATAT+AGG | - | chr4_2:51711214-51711233 | Msa0605690:intron | 25.0% |
| !! | TTGAAATCACTTTAGAAACA+TGG | - | chr4_2:51711228-51711247 | Msa0605690:intron | 25.0% |
| ! | GTGTAAAGAAACAATTACAA+AGG | + | chr4_2:51711377-51711396 | Msa0605700:intron | 25.0% |
| !!! | AATAATGCCACTTTTGTATT+TGG | - | chr4_2:51711452-51711471 | Msa0605690:intron | 25.0% |
| !! | TTACTGCAATTTCTCTAAAA+TGG | + | chr4_2:51711526-51711545 | Msa0605700:intron | 25.0% |
| !!! | AATGGACATGTATTTTGAAA+CGG | + | chr4_2:51711544-51711563 | Msa0605700:intron | 25.0% |
| ! | TGATTTATAACACGTTGTTA+TGG | + | chr4_2:51711709-51711728 | Msa0605700:intron | 25.0% |
| ! | GATTTATAACACGTTGTTAT+GGG | + | chr4_2:51711710-51711729 | Msa0605700:intron | 25.0% |
| ! | ATTTATAACACGTTGTTATG+GGG | + | chr4_2:51711711-51711730 | Msa0605700:intron | 25.0% |
| !!! | ATTGATGTTGATTTTTTGAC+AGG | + | chr4_2:51711773-51711792 | Msa0605700:intron | 25.0% |
| !!! | TTGATGTTGATTTTTTGACA+GGG | + | chr4_2:51711774-51711793 | Msa0605700:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | - | chr4_2:51713025-51713044 | Msa0605690:intron | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | - | chr4_2:51713024-51713043 | Msa0605690:intron | 25.0% |
| ! | TTAAGGAAAAAAATAAGCCA+GGG | - | chr4_2:51712731-51712750 | Msa0605690:intron | 25.0% |
| ! | TTTAAGGAAAAAAATAAGCC+AGG | - | chr4_2:51712732-51712751 | Msa0605690:intron | 25.0% |
| ! | AAAAAAATTCGGGAAAAATC+TGG | + | chr4_2:51712883-51712902 | Msa0605700:intron | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | + | chr4_2:51713024-51713043 | Msa0605700:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | + | chr4_2:51713025-51713044 | Msa0605700:intron | 25.0% |
| ! | AGGATTATAACTGAATCTAA+TGG | - | chr4_2:51713372-51713391 | Msa0605690:intron | 25.0% |
| ! | TTAGATTCAGTTATAATCCT+TGG | + | chr4_2:51713372-51713391 | Msa0605700:CDS | 25.0% |
| ! | TAGATTCAGTTATAATCCTT+GGG | + | chr4_2:51713373-51713392 | Msa0605700:CDS | 25.0% |
| !!! | ATATTTGTGCTTTTTACCTT+TGG | - | chr4_2:51713409-51713428 | Msa0605690:intron | 25.0% |
| ! | AAAGTGATATATTTGACATC+AGG | - | chr4_2:51714352-51714371 | Msa0605690:intron | 25.0% |
| ! | TGATGTCAAATATATCACTT+TGG | + | chr4_2:51714351-51714370 | Msa0605700:CDS | 25.0% |
| ! | TGGTTATTATCACTTAACAA+AGG | + | chr4_2:51714421-51714440 | Msa0605700:CDS | 25.0% |
| ! | GCCAGTATATTGTTTAATTA+AGG | + | chr4_2:51714466-51714485 | Msa0605700:three_prime_UTR | 25.0% |
| ! | ACTAGTCAATTTCTTTGTTA+TGG | + | chr4_2:51714493-51714512 | Msa0605700:three_prime_UTR | 25.0% |
| !! | CTAGTCAATTTCTTTGTTAT+GGG | + | chr4_2:51714494-51714513 | Msa0605700:three_prime_UTR | 25.0% |
| ! | TCTCAATGATATACGAATAA+AGG | + | chr4_2:51714631-51714650 | Msa0605700:three_prime_UTR | 25.0% |
| ! | TAAAATCAAAACATCAAGCT+TGG | - | chr4_2:51714713-51714732 | Msa0605690:intron | 25.0% |
| CAACACTAATTATCTTCTCT+AGG | + | chr4_2:51710025-51710044 | Msa0605700:five_prime_UTR | 30.0% | |
| ACAAAGATTCTTGTAATAGG+AGG | + | chr4_2:51710084-51710103 | Msa0605700:CDS | 30.0% | |
| ATCCAAAGTTTCAATACCTT+GGG | + | chr4_2:51710216-51710235 | Msa0605700:CDS | 30.0% | |
| AACAAAGTCATGAAAAGAAC+TGG | - | chr4_2:51710316-51710335 | Msa0605690:intron | 30.0% | |
| ! | GGTTTTCTTTTAAATCGGTT+AGG | - | chr4_2:51710416-51710435 | Msa0605690:intron | 30.0% |
| AAAAATCTCTCGGATGAAAT+TGG | + | chr4_2:51710507-51710526 | Msa0605700:intron | 30.0% | |
| ACCGAGCAATTTATTATTAG+CGG | + | chr4_2:51710799-51710818 | Msa0605700:intron | 30.0% | |
| TCCGCTAATAATAAATTGCT+CGG | - | chr4_2:51710803-51710822 | Msa0605690:intron | 30.0% | |
| AATGAATCCTCTTTAGTACA+AGG | + | chr4_2:51711317-51711336 | Msa0605700:intron | 30.0% | |
| ! | ACTGACAACTTGTAATTTTG+GGG | - | chr4_2:51711359-51711378 | Msa0605690:intron | 30.0% |
| ! | CACTGACAACTTGTAATTTT+GGG | - | chr4_2:51711360-51711379 | Msa0605690:intron | 30.0% |
| ! | ACACTGACAACTTGTAATTT+TGG | - | chr4_2:51711361-51711380 | Msa0605690:intron | 30.0% |
| GTACGTTGTTTGGTATTTAT+TGG | + | chr4_2:51711738-51711757 | Msa0605700:intron | 30.0% | |
| GTTGTTTGGTATTTATTGGT+AGG | + | chr4_2:51711742-51711761 | Msa0605700:intron | 30.0% | |
| CAAGATGAAACTAAACTTGA+AGG | + | chr4_2:51712219-51712238 | Msa0605700:intron | 30.0% | |
| AAACTAAACTTGAAGGTTTC+AGG | + | chr4_2:51712226-51712245 | Msa0605700:intron | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | - | chr4_2:51713026-51713045 | Msa0605690:intron | 30.0% | |
| CAATTTACCAAAAATGGCAT+GGG | + | chr4_2:51712691-51712710 | Msa0605700:intron | 30.0% | |
| CATCAGCAATTTACCAAAAA+TGG | - | chr4_2:51712972-51712991 | Msa0605690:intron | 30.0% | |
| !! | TTTTTGGTAAATTGCTGATG+TGG | + | chr4_2:51712972-51712991 | Msa0605700:intron | 30.0% |
| TAACTGATTAAACTTTGCAG+GGG | + | chr4_2:51713026-51713045 | Msa0605700:intron | 30.0% | |
| ACATCATTTCCAAATTCAGA+TGG | - | chr4_2:51713186-51713205 | Msa0605690:intron | 30.0% | |
| ATCTGAATTTGGAAATGATG+TGG | + | chr4_2:51713185-51713204 | Msa0605700:intron | 30.0% | |
| AAAGGCTGTATTTGATACAA+AGG | + | chr4_2:51713233-51713252 | Msa0605700:intron | 30.0% | |
| TCAATAAGTTGTGATTGAGT+TGG | - | chr4_2:51713339-51713358 | Msa0605690:intron | 30.0% | |
| AGATTCAGTTATAATCCTTG+GGG | + | chr4_2:51713374-51713393 | Msa0605700:CDS | 30.0% | |
| ! | TGTTTATATCTAAAACCGGA+GGG | - | chr4_2:51713465-51713484 | Msa0605690:intron | 30.0% |
| ! | TTGTTTATATCTAAAACCGG+AGG | - | chr4_2:51713466-51713485 | Msa0605690:intron | 30.0% |
| ! | AGAATTTTGTTCAAGGTTCT+TGG | - | chr4_2:51713691-51713710 | Msa0605690:intron | 30.0% |
| ATTGTGAAGCATGAATACAT+TGG | - | chr4_2:51714151-51714170 | Msa0605690:intron | 30.0% | |
| TCACCTTATCCTGTAAATAT+GGG | + | chr4_2:51714235-51714254 | Msa0605700:CDS | 30.0% | |
| ATGGGAATTGTTCAAAAACA+CGG | + | chr4_2:51714512-51714531 | Msa0605700:three_prime_UTR | 30.0% | |
| ! | GTCATATAGCAATTTTCCGA+TGG | + | chr4_2:51710047-51710066 | Msa0605700:exon | 35.0% |
| ATTCTTGTAATAGGAGGAAC+AGG | + | chr4_2:51710090-51710109 | Msa0605700:CDS | 35.0% | |
| ! | GGTATTGAAACTTTGGATGA+TGG | - | chr4_2:51710214-51710233 | Msa0605690:intron | 35.0% |
| CATCCAAAGTTTCAATACCT+TGG | + | chr4_2:51710215-51710234 | Msa0605700:CDS | 35.0% | |
| CGAAATGTGATGAGTGTAAT+CGG | + | chr4_2:51710381-51710400 | Msa0605700:intron | 35.0% | |
| !! | CCATTTTTCAGATCAATCTG+TGG | - | chr4_2:51710437-51710456 | Msa0605690:intron | 35.0% |
| CCACAGATTGATCTGAAAAA+TGG | + | chr4_2:51710434-51710453 | Msa0605700:intron | 35.0% | |
| TGATATTCATGTGTGCTGTA+TGG | - | chr4_2:51710550-51710569 | Msa0605690:intron | 35.0% | |
| TCGATACCTAGACATTGTAA+CGG | + | chr4_2:51711404-51711423 | Msa0605700:intron | 35.0% | |
| TTGTATTTGGTACTCAGAGA+TGG | - | chr4_2:51711439-51711458 | Msa0605690:intron | 35.0% | |
| CTGAGTACCAAATACAAAAG+TGG | + | chr4_2:51711442-51711461 | Msa0605700:intron | 35.0% | |
| !!! | GACATGTATTTTGAAACGGA+GGG | + | chr4_2:51711548-51711567 | Msa0605700:intron | 35.0% |
| TTATGACCTTAACCAAACTC+TGG | - | chr4_2:51711815-51711834 | Msa0605690:intron | 35.0% | |
| ! | AAAAAGGATTAGCGATTGCA+GGG | - | chr4_2:51713054-51713073 | Msa0605690:intron | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | - | chr4_2:51713053-51713072 | Msa0605690:intron | 35.0% |
| !! | TTTTTGGTAAATTGCTGACG+TGG | - | chr4_2:51712685-51712704 | Msa0605690:intron | 35.0% |
| CGTCAGCAATTTACCAAAAA+TGG | + | chr4_2:51712685-51712704 | Msa0605700:intron | 35.0% | |
| GCAATTTACCAAAAATGGCA+TGG | + | chr4_2:51712690-51712709 | Msa0605700:intron | 35.0% | |
| !!! | GTCAATTCTCATGCCATTTT+TGG | + | chr4_2:51712956-51712975 | Msa0605700:intron | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | chr4_2:51713053-51713072 | Msa0605700:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | chr4_2:51713054-51713073 | Msa0605700:intron | 35.0% |
| TTATTCGTCCCTGTAAATAG+GGG | - | chr4_2:51713096-51713115 | Msa0605690:intron | 35.0% | |
| GTTATTCGTCCCTGTAAATA+GGG | - | chr4_2:51713097-51713116 | Msa0605690:intron | 35.0% | |
| TGTTATTCGTCCCTGTAAAT+AGG | - | chr4_2:51713098-51713117 | Msa0605690:intron | 35.0% | |
| AGGTTCTTTCCATCTGAATT+TGG | + | chr4_2:51713174-51713193 | Msa0605700:intron | 35.0% | |
| CTTCATTCACTCCATGATTT+CGG | - | chr4_2:51713212-51713231 | Msa0605690:intron | 35.0% | |
| ATACAAAGGCCAAATTTCGT+AGG | + | chr4_2:51713247-51713266 | Msa0605700:intron | 35.0% | |
| TACAAAGGCCAAATTTCGTA+GGG | + | chr4_2:51713248-51713267 | Msa0605700:intron | 35.0% | |
| !! | TAAGTTGTGATTGAGTTGGT+AGG | - | chr4_2:51713335-51713354 | Msa0605690:intron | 35.0% |
| TTGTATGACAATGTGTTCGT+GGG | - | chr4_2:51713727-51713746 | Msa0605690:intron | 35.0% | |
| ATTGTATGACAATGTGTTCG+TGG | - | chr4_2:51713728-51713747 | Msa0605690:intron | 35.0% | |
| ACAATGACCTAGTATCTCTT+TGG | + | chr4_2:51713743-51713762 | Msa0605700:CDS | 35.0% | |
| CAATGACCTAGTATCTCTTT+GGG | + | chr4_2:51713744-51713763 | Msa0605700:CDS | 35.0% | |
| !! | CAAGTACTGAAGATGATTCA+AGG | + | chr4_2:51713814-51713833 | Msa0605700:CDS | 35.0% |
| ACACAAACACTCCTAAGATT+AGG | + | chr4_2:51714000-51714019 | Msa0605700:intron | 35.0% | |
| TGAATACATTGGACATGACA+AGG | - | chr4_2:51714140-51714159 | Msa0605690:intron | 35.0% | |
| GTCACCTTATCCTGTAAATA+TGG | + | chr4_2:51714234-51714253 | Msa0605700:CDS | 35.0% | |
| ! | GCACCCCATTTTACTTAAAT+TGG | + | chr4_2:51714401-51714420 | Msa0605700:CDS | 35.0% |
| GTTGAAGCTAGCATTAAAGC+TGG | + | chr4_2:51710132-51710151 | Msa0605700:CDS | 40.0% | |
| CTCGTATGAGAGCAAAAGTA+GGG | - | chr4_2:51710161-51710180 | Msa0605690:intron | 40.0% | |
| !! | CACCCAAGGTATTGAAACTT+TGG | - | chr4_2:51710221-51710240 | Msa0605690:intron | 40.0% |
| CAAAACTATGTTGACACCCA+AGG | - | chr4_2:51710235-51710254 | Msa0605690:intron | 40.0% | |
| ! | CTTGGGTGTCAACATAGTTT+TGG | + | chr4_2:51710233-51710252 | Msa0605700:CDS | 40.0% |
| TTCATGTGTGCTGTATGGTT+CGG | - | chr4_2:51710545-51710564 | Msa0605690:intron | 40.0% | |
| GAGTTCACCTTGTACTAAAG+AGG | - | chr4_2:51711327-51711346 | Msa0605690:intron | 40.0% | |
| TAGTACAAGGTGAACTCAAG+AGG | + | chr4_2:51711330-51711349 | Msa0605700:intron | 40.0% | |
| CGATACCTAGACATTGTAAC+GGG | + | chr4_2:51711405-51711424 | Msa0605700:intron | 40.0% | |
| TATTTGGTACTCAGAGATGG+TGG | - | chr4_2:51711436-51711455 | Msa0605690:intron | 40.0% | |
| !!! | GGACATGTATTTTGAAACGG+AGG | + | chr4_2:51711547-51711566 | Msa0605700:intron | 40.0% |
| ATTGTACATGTCAAGAGCTC+AGG | - | chr4_2:51711643-51711662 | Msa0605690:intron | 40.0% | |
| ATGGGGTTTAGTACGTTGTT+TGG | + | chr4_2:51711728-51711747 | Msa0605700:intron | 40.0% | |
| TATATACGACCACCAGAGTT+TGG | + | chr4_2:51711800-51711819 | Msa0605700:CDS | 40.0% | |
| GGTTAAGGTCATAAAGCAAG+TGG | + | chr4_2:51711821-51711840 | Msa0605700:CDS | 40.0% | |
| TTAAACGACCCCTATTTGCA+GGG | - | chr4_2:51712572-51712591 | Msa0605690:intron | 40.0% | |
| TTTAAACGACCCCTATTTGC+AGG | - | chr4_2:51712573-51712592 | Msa0605690:intron | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | - | chr4_2:51713038-51713057 | Msa0605690:intron | 40.0% | |
| !!! | GTCAATTCCCATGCCATTTT+TGG | - | chr4_2:51712701-51712720 | Msa0605690:intron | 40.0% |
| AGAATTGACGAAAATACCCC+TGG | - | chr4_2:51712945-51712964 | Msa0605690:intron | 40.0% | |
| TGATGTGGCAGTGATTAACT+GGG | + | chr4_2:51712987-51713006 | Msa0605700:intron | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | + | chr4_2:51713038-51713057 | Msa0605700:intron | 40.0% | |
| TTTAAGCGACCCCTATTTAC+AGG | + | chr4_2:51713084-51713103 | Msa0605700:intron | 40.0% | |
| TTAAGCGACCCCTATTTACA+GGG | + | chr4_2:51713085-51713104 | Msa0605700:intron | 40.0% | |
| AATGATGTGGACCGAAATCA+TGG | + | chr4_2:51713198-51713217 | Msa0605700:intron | 40.0% | |
| CGAAATCATGGAGTGAATGA+AGG | + | chr4_2:51713210-51713229 | Msa0605700:intron | 40.0% | |
| TCATGGAGTGAATGAAGGAA+AGG | + | chr4_2:51713215-51713234 | Msa0605700:intron | 40.0% | |
| TTTGCAACCACATAGGTATG+GGG | - | chr4_2:51713294-51713313 | Msa0605690:intron | 40.0% | |
| GTTTGCAACCACATAGGTAT+GGG | - | chr4_2:51713295-51713314 | Msa0605690:intron | 40.0% | |
| AGTTTGCAACCACATAGGTA+TGG | - | chr4_2:51713296-51713315 | Msa0605690:intron | 40.0% | |
| GAGAAAGTTTGCAACCACAT+AGG | - | chr4_2:51713301-51713320 | Msa0605690:intron | 40.0% | |
| TCAGTTATAATCCTTGGGGA+TGG | + | chr4_2:51713378-51713397 | Msa0605700:CDS | 40.0% | |
| CAAGGTTCTTGGATCATCAA+TGG | - | chr4_2:51713680-51713699 | Msa0605690:intron | 40.0% | |
| TCTTCTCCCAAAGAGATACT+AGG | - | chr4_2:51713753-51713772 | Msa0605690:intron | 40.0% | |
| ATCTTCAGTACTTGCTTCTC+TGG | - | chr4_2:51713808-51713827 | Msa0605690:intron | 40.0% | |
| ATACAACACATGTCTCACAC+CGG | - | chr4_2:51714032-51714051 | Msa0605690:intron | 40.0% | |
| AGGCCCATATTTACAGGATA+AGG | - | chr4_2:51714241-51714260 | Msa0605690:intron | 40.0% | |
| ATTGCAAGGCCCATATTTAC+AGG | - | chr4_2:51714247-51714266 | Msa0605690:intron | 40.0% | |
| TATGAAATTGATCCCTCCAC+TGG | + | chr4_2:51714304-51714323 | Msa0605700:CDS | 40.0% | |
| CACTTTGGATGAGTACTTTG+AGG | + | chr4_2:51714366-51714385 | Msa0605700:CDS | 40.0% | |
| ! | AGCAATTTTCCGATGGCTGT+AGG | + | chr4_2:51710054-51710073 | Msa0605700:exon | 45.0% |
| GTAGTTGTTCCTACAGCCAT+CGG | - | chr4_2:51710066-51710085 | Msa0605690:intron | 45.0% | |
| AATAGGAGGAACAGGTTACG+TGG | + | chr4_2:51710098-51710117 | Msa0605700:CDS | 45.0% | |
| ATAGGAGGAACAGGTTACGT+GGG | + | chr4_2:51710099-51710118 | Msa0605700:CDS | 45.0% | |
| CCTCGTATGAGAGCAAAAGT+AGG | - | chr4_2:51710162-51710181 | Msa0605690:intron | 45.0% | |
| !! | CCTACTTTTGCTCTCATACG+AGG | + | chr4_2:51710159-51710178 | Msa0605700:CDS | 45.0% |
| !! | TGGATGATGGATGACTTGTG+TGG | - | chr4_2:51710201-51710220 | Msa0605690:intron | 45.0% |
| TGACCTTAACCAAACTCTGG+TGG | - | chr4_2:51711812-51711831 | Msa0605690:intron | 45.0% | |
| GATCCTTGCCGCTATTAAAG+AGG | + | chr4_2:51711893-51711912 | Msa0605700:intron | 45.0% | |
| GTTTCCCGCCTCTTTAATAG+CGG | - | chr4_2:51711904-51711923 | Msa0605690:intron | 45.0% | |
| TAAAGAGGCGGGAAACGTTA+AGG | + | chr4_2:51711908-51711927 | Msa0605700:intron | 45.0% | |
| TGTGATTCGTCCCTGCAAAT+AGG | + | chr4_2:51712559-51712578 | Msa0605700:intron | 45.0% | |
| GTGATTCGTCCCTGCAAATA+GGG | + | chr4_2:51712560-51712579 | Msa0605700:intron | 45.0% | |
| TGATTCGTCCCTGCAAATAG+GGG | + | chr4_2:51712561-51712580 | Msa0605700:intron | 45.0% | |
| GCAGTGATTAACTGGGTCAA+AGG | - | chr4_2:51712994-51713013 | Msa0605690:intron | 45.0% | |
| TGACGTGGCAGTGATTAACT+GGG | - | chr4_2:51712670-51712689 | Msa0605690:intron | 45.0% | |
| GGGAATTGACGAAAATACCC+TGG | + | chr4_2:51712711-51712730 | Msa0605700:intron | 45.0% | |
| CTGATGTGGCAGTGATTAAC+TGG | + | chr4_2:51712986-51713005 | Msa0605700:intron | 45.0% | |
| GCAGTGATTAACTGGGTCAA+AGG | + | chr4_2:51712994-51713013 | Msa0605700:intron | 45.0% | |
| CTCAATGGCCCTACGAAATT+TGG | - | chr4_2:51713259-51713278 | Msa0605690:intron | 45.0% | |
| CAAATTTCGTAGGGCCATTG+AGG | + | chr4_2:51713257-51713276 | Msa0605700:CDS | 45.0% | |
| GGGAATTCCTTCATCCTCAA+TGG | - | chr4_2:51713274-51713293 | Msa0605690:intron | 45.0% | |
| AGGAATTCCCCATACCTATG+TGG | + | chr4_2:51713284-51713303 | Msa0605700:CDS | 45.0% | |
| CTTTGGTATTTCCATCCCCA+AGG | - | chr4_2:51713392-51713411 | Msa0605690:intron | 45.0% | |
| CTTGGGGATGGAAATACCAA+AGG | + | chr4_2:51713390-51713409 | Msa0605700:CDS | 45.0% | |
| TACTTATCACACACACCCTC+CGG | + | chr4_2:51713447-51713466 | Msa0605700:intron | 45.0% | |
| TATGACAATGTGTTCGTGGG+AGG | - | chr4_2:51713724-51713743 | Msa0605690:intron | 45.0% | |
| TACAACACATGTCTCACACC+GGG | - | chr4_2:51714031-51714050 | Msa0605690:intron | 45.0% | |
| TATGGGCCTTGCAATTTGTC+TGG | + | chr4_2:51714252-51714271 | Msa0605700:CDS | 45.0% | |
| ATCCAGCCAGACAAATTGCA+AGG | - | chr4_2:51714261-51714280 | Msa0605690:intron | 45.0% | |
| TGTCTGGCTGGATATGTGAA+TGG | + | chr4_2:51714268-51714287 | Msa0605700:CDS | 45.0% | |
| !! | TTCTGAAGCTTCTACTCCAG+TGG | - | chr4_2:51714323-51714342 | Msa0605690:intron | 45.0% |
| !!! | ATTAATATAAATATGTATTT+TGG | - | chr4_2:51711001-51711020 | Msa0605690:intron | 5.0% |
| !!! | TTTTTTTTAAGAATAAAAAA+TGG | + | chr4_2:51711282-51711301 | Msa0605700:intron | 5.0% |
| !!! | AATTTTGAAATTTTTTTTTA+AGG | - | chr4_2:51712748-51712767 | Msa0605690:intron | 5.0% |
| !! | GAAAAAATAATTAAAAATTT+CGG | + | chr4_2:51712800-51712819 | Msa0605700:intron | 5.0% |
| !! | AAAAATTGTAAAAAAAAATT+CGG | + | chr4_2:51712872-51712891 | Msa0605700:intron | 5.0% |
| TCGGACCCGTTACAATGTCT+AGG | - | chr4_2:51711413-51711432 | Msa0605690:intron | 50.0% | |
| ! | TGGTACTCAGAGATGGTGGT+CGG | - | chr4_2:51711432-51711451 | Msa0605690:intron | 50.0% |
| CGACCACCAGAGTTTGGTTA+AGG | + | chr4_2:51711806-51711825 | Msa0605700:CDS | 50.0% | |
| CCTTGCCGCTATTAAAGAGG+CGG | + | chr4_2:51711896-51711915 | Msa0605700:intron | 50.0% | |
| CTTGCCGCTATTAAAGAGGC+GGG | + | chr4_2:51711897-51711916 | Msa0605700:intron | 50.0% | |
| CTGACGTGGCAGTGATTAAC+TGG | - | chr4_2:51712671-51712690 | Msa0605690:intron | 50.0% | |
| TCCTAAGATTAGGCGTGTCC+CGG | + | chr4_2:51714010-51714029 | Msa0605700:intron | 50.0% | |
| GAAGCTTCTACTCCAGTGGA+GGG | - | chr4_2:51714319-51714338 | Msa0605690:intron | 50.0% | |
| TGAAGCTTCTACTCCAGTGG+AGG | - | chr4_2:51714320-51714339 | Msa0605690:intron | 50.0% | |
| CCGCCTCTTTAATAGCGGCA+AGG | - | chr4_2:51711899-51711918 | Msa0605690:intron | 55.0% | |
| CGTAGGGCCATTGAGGATGA+AGG | + | chr4_2:51713264-51713283 | Msa0605700:CDS | 55.0% | |
| ACCGGGACACGCCTAATCTT+AGG | - | chr4_2:51714014-51714033 | Msa0605690:intron | 55.0% | |
| GGCCTTGCAATTTGTCTGGC+TGG | + | chr4_2:51714256-51714275 | Msa0605700:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 51710022 | 51714777 | 51710022 | ID=Msa0605700;Name=Msa0605700 |
| chr4_2 | mRNA | 51710022 | 51714777 | 51710022 | ID=Msa0605700-mRNA-1;Parent=Msa0605700;Name=Msa0605700-mRNA-1;_AED=0.08;_eAED=0.08;_QI=44|0.75|0.6|1|0.75|0.8|5|318|276 |
| chr4_2 | exon | 51710022 | 51710254 | 51710022 | ID=Msa0605700-mRNA-1:exon:12402;Parent=Msa0605700-mRNA-1 |
| chr4_2 | exon | 51711795 | 51711848 | 51711795 | ID=Msa0605700-mRNA-1:exon:12403;Parent=Msa0605700-mRNA-1 |
| chr4_2 | exon | 51713255 | 51713411 | 51713255 | ID=Msa0605700-mRNA-1:exon:12404;Parent=Msa0605700-mRNA-1 |
| chr4_2 | exon | 51713632 | 51713835 | 51713632 | ID=Msa0605700-mRNA-1:exon:12405;Parent=Msa0605700-mRNA-1 |
| chr4_2 | exon | 51714233 | 51714777 | 51714233 | ID=Msa0605700-mRNA-1:exon:12406;Parent=Msa0605700-mRNA-1 |
| chr4_2 | five_prime_UTR | 51710022 | 51710065 | 51710022 | ID=Msa0605700-mRNA-1:five_prime_utr;Parent=Msa0605700-mRNA-1 |
| chr4_2 | CDS | 51710066 | 51710254 | 51710066 | ID=Msa0605700-mRNA-1:cds;Parent=Msa0605700-mRNA-1 |
| chr4_2 | CDS | 51711795 | 51711848 | 51711795 | ID=Msa0605700-mRNA-1:cds;Parent=Msa0605700-mRNA-1 |
| chr4_2 | CDS | 51713255 | 51713411 | 51713255 | ID=Msa0605700-mRNA-1:cds;Parent=Msa0605700-mRNA-1 |
| chr4_2 | CDS | 51713632 | 51713835 | 51713632 | ID=Msa0605700-mRNA-1:cds;Parent=Msa0605700-mRNA-1 |
| chr4_2 | CDS | 51714233 | 51714459 | 51714233 | ID=Msa0605700-mRNA-1:cds;Parent=Msa0605700-mRNA-1 |
| chr4_2 | three_prime_UTR | 51714460 | 51714777 | 51714460 | ID=Msa0605700-mRNA-1:three_prime_utr;Parent=Msa0605700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
