Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550390 | XP_003606934.1 | 93.939 | 330 | 20 | 0 | 1 | 330 | 1 | 330 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550390 | sp|O81355|PYRC5_PYRCO | 62.418 | 306 | 115 | 0 | 3 | 308 | 1 | 306 | 2.74e-145 | 415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550390 | G7JHC1 | 93.939 | 330 | 20 | 0 | 1 | 330 | 1 | 330 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0550390 | Msa0605700 | 0.819719 | 1.002171e-52 | -8.615850e-47 |
| Msa0550390 | Msa0646720 | 0.848136 | 7.425838e-60 | -8.615850e-47 |
| Msa0550390 | Msa0686290 | 0.818945 | 1.504155e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550390 | MtrunA17_Chr4g0035111 | 93.939 | 330 | 20 | 0 | 1 | 330 | 1 | 330 | 0.0 | 644 |
| Msa0550390 | MtrunA17_Chr4g0035131 | 64.308 | 325 | 115 | 1 | 1 | 324 | 38 | 362 | 2.56e-153 | 434 |
| Msa0550390 | MtrunA17_Chr3g0144701 | 64.516 | 310 | 108 | 1 | 1 | 308 | 1 | 310 | 3.60e-146 | 414 |
| Msa0550390 | MtrunA17_Chr3g0141691 | 59.283 | 307 | 123 | 1 | 1 | 307 | 1 | 305 | 9.75e-134 | 382 |
| Msa0550390 | MtrunA17_Chr3g0141681 | 59.091 | 308 | 124 | 1 | 3 | 308 | 1 | 308 | 8.61e-133 | 380 |
| Msa0550390 | MtrunA17_Chr5g0404471 | 59.667 | 300 | 121 | 0 | 7 | 306 | 6 | 305 | 5.27e-132 | 378 |
| Msa0550390 | MtrunA17_Chr5g0404481 | 49.842 | 317 | 147 | 3 | 3 | 308 | 1 | 316 | 2.42e-100 | 298 |
| Msa0550390 | MtrunA17_Chr5g0404511 | 49.527 | 317 | 148 | 3 | 3 | 308 | 1 | 316 | 7.04e-100 | 297 |
| Msa0550390 | MtrunA17_Chr4g0035121 | 40.594 | 303 | 178 | 1 | 7 | 307 | 4 | 306 | 9.62e-85 | 258 |
| Msa0550390 | MtrunA17_Chr8g0369391 | 42.671 | 307 | 169 | 3 | 7 | 307 | 4 | 309 | 4.65e-78 | 241 |
| Msa0550390 | MtrunA17_Chr3g0078901 | 40.066 | 302 | 175 | 4 | 8 | 308 | 7 | 303 | 2.00e-75 | 234 |
| Msa0550390 | MtrunA17_Chr5g0409641 | 40.717 | 307 | 174 | 3 | 7 | 307 | 4 | 308 | 2.05e-74 | 231 |
| Msa0550390 | MtrunA17_Chr5g0409651 | 40.391 | 307 | 175 | 3 | 7 | 307 | 4 | 308 | 4.82e-74 | 231 |
| Msa0550390 | MtrunA17_Chr3g0078831 | 39.274 | 303 | 178 | 4 | 7 | 308 | 6 | 303 | 7.56e-72 | 225 |
| Msa0550390 | MtrunA17_Chr1g0198771 | 34.768 | 302 | 194 | 2 | 8 | 307 | 15 | 315 | 8.86e-60 | 195 |
| Msa0550390 | MtrunA17_Chr3g0078941 | 35.678 | 199 | 123 | 3 | 106 | 304 | 12 | 205 | 5.54e-39 | 137 |
| Msa0550390 | MtrunA17_Chr3g0078951 | 48.039 | 102 | 49 | 3 | 8 | 108 | 7 | 105 | 5.34e-21 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0550390 | AT4G39230.1 | 59.868 | 304 | 122 | 0 | 5 | 308 | 3 | 306 | 1.61e-132 | 380 |
| Msa0550390 | AT1G75280.1 | 60.596 | 302 | 116 | 2 | 7 | 306 | 6 | 306 | 1.74e-125 | 362 |
| Msa0550390 | AT1G75290.1 | 56.291 | 302 | 130 | 1 | 7 | 306 | 6 | 307 | 6.00e-121 | 351 |
| Msa0550390 | AT1G75290.2 | 56.291 | 302 | 130 | 1 | 7 | 306 | 33 | 334 | 3.24e-120 | 350 |
| Msa0550390 | AT1G75300.1 | 54.403 | 318 | 126 | 3 | 7 | 308 | 6 | 320 | 2.29e-112 | 329 |
| Msa0550390 | AT1G19540.1 | 50.492 | 305 | 147 | 2 | 6 | 306 | 2 | 306 | 1.01e-100 | 299 |
| Msa0550390 | AT4G34540.1 | 42.857 | 301 | 167 | 1 | 7 | 307 | 8 | 303 | 7.26e-89 | 269 |
| Msa0550390 | AT1G19540.2 | 51.181 | 254 | 120 | 2 | 6 | 255 | 2 | 255 | 3.91e-83 | 253 |
| Msa0550390 | AT1G32100.1 | 42.157 | 306 | 169 | 3 | 7 | 306 | 10 | 313 | 2.02e-75 | 234 |
| Msa0550390 | AT4G13660.1 | 41.935 | 310 | 172 | 3 | 4 | 307 | 7 | 314 | 5.28e-75 | 234 |
| Msa0550390 | AT4G13660.2 | 41.935 | 310 | 172 | 3 | 4 | 307 | 7 | 314 | 5.28e-75 | 234 |
Find 93 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAACCAATTTAAGTAAAA+TGG | 0.121188 | 4_1:+45809800 | None:intergenic |
| CTCAATGGCCCTACGAAATT+TGG | 0.190021 | 4_1:+45810959 | None:intergenic |
| GTCACCTTATCCTGTAAATA+TGG | 0.192397 | 4_1:-45809972 | Msa0550390:CDS |
| ACAAATCAATTTCTTTGTTA+TGG | 0.218072 | 4_1:-45809713 | Msa0550390:intron |
| GCTAGTATATTGTTTAATTA+AGG | 0.246395 | 4_1:-45809740 | Msa0550390:three_prime_UTR |
| AGGTTCTTTCCATCTGAATT+TGG | 0.248424 | 4_1:-45811041 | Msa0550390:CDS |
| ATCTTCAGTACTTGCTTTCC+TGG | 0.255833 | 4_1:+45810411 | None:intergenic |
| CAAATCAATTTCTTTGTTAT+GGG | 0.263323 | 4_1:-45809712 | Msa0550390:intron |
| TGACGAATCGTTCCCCATTC+AGG | 0.264113 | 4_1:-45809387 | Msa0550390:three_prime_UTR |
| TTGCAATTTATCTTCATTCA+TGG | 0.295362 | 4_1:-45809417 | Msa0550390:three_prime_UTR |
| ATTGCAAGGCCCATATTTAC+AGG | 0.311260 | 4_1:+45809962 | None:intergenic |
| CTTCATTCACTCCATGATTT+CGG | 0.323639 | 4_1:+45811006 | None:intergenic |
| ACTACAAAGATTCTTGTAAT+AGG | 0.327545 | 4_1:-45813350 | Msa0550390:CDS |
| ACAATGACCTAGTATCTCTT+TGG | 0.331162 | 4_1:-45810473 | Msa0550390:CDS |
| TGTCTCAATGATTTATTACT+TGG | 0.334727 | 4_1:+45809299 | None:intergenic |
| CTTGGGTGTCAACATAGTTT+TGG | 0.336705 | 4_1:-45813198 | Msa0550390:intron |
| AGGATAATAACTGAATCTAA+TGG | 0.357946 | 4_1:+45810846 | None:intergenic |
| TAGATTCAGTTATTATCCTT+GGG | 0.359380 | 4_1:-45810842 | Msa0550390:CDS |
| CACCCAAGGTATTGAAACTT+TGG | 0.363353 | 4_1:+45813213 | None:intergenic |
| ATAACCAATTTAAGTAAAAT+GGG | 0.369317 | 4_1:+45809801 | None:intergenic |
| CAAGGTTCTTGGATCATCAA+TGG | 0.395204 | 4_1:+45810539 | None:intergenic |
| GGCCTTGCAATTTGTCTGGC+TGG | 0.398360 | 4_1:-45809950 | Msa0550390:CDS |
| CACTTTGGATGAGTACTTTG+AGG | 0.399801 | 4_1:-45809840 | Msa0550390:CDS |
| TTAGATTCAGTTATTATCCT+TGG | 0.404938 | 4_1:-45810843 | Msa0550390:CDS |
| TATATACGACCACCAGAGTT+TGG | 0.407580 | 4_1:-45811457 | Msa0550390:CDS |
| ATTCTTGTAATAGGAGGAAC+AGG | 0.414103 | 4_1:-45813341 | Msa0550390:CDS |
| CAATGACCTAGTATCTCTTT+GGG | 0.423107 | 4_1:-45810472 | Msa0550390:CDS |
| ATCCAAAGTTTCAATACCTT+GGG | 0.423977 | 4_1:-45813215 | Msa0550390:CDS |
| TATGGGCCTTGCAATTTGTC+TGG | 0.430083 | 4_1:-45809954 | Msa0550390:CDS |
| CATCCAAAGTTTCAATACCT+TGG | 0.431970 | 4_1:-45813216 | Msa0550390:CDS |
| GACGAATCGTTCCCCATTCA+GGG | 0.437022 | 4_1:-45809386 | Msa0550390:three_prime_UTR |
| AGTCACTTTAGTCCCTGAAT+GGG | 0.440442 | 4_1:+45809374 | None:intergenic |
| CGACCACCAGAGTTTGGTTA+AGG | 0.452721 | 4_1:-45811451 | Msa0550390:CDS |
| AGGCCCATATTTACAGGATA+AGG | 0.455077 | 4_1:+45809968 | None:intergenic |
| TAAAGAGGCGGGAAACGTTA+AGG | 0.462126 | 4_1:-45811349 | Msa0550390:intron |
| AAAGTGATATATTTGACATC+AGG | 0.462962 | 4_1:+45809857 | None:intergenic |
| AAAGGCTGTATTTGATACTA+AGG | 0.464258 | 4_1:-45810982 | Msa0550390:CDS |
| TAGTCACTTTAGTCCCTGAA+TGG | 0.464340 | 4_1:+45809373 | None:intergenic |
| CAAGTACTGAAGATGATTCA+AGG | 0.467947 | 4_1:-45810402 | Msa0550390:intron |
| GGTATTGAAACTTTGGATGA+TGG | 0.470946 | 4_1:+45813220 | None:intergenic |
| TCACCTTATCCTGTAAATAT+GGG | 0.480725 | 4_1:-45809971 | Msa0550390:CDS |
| CGTAGGGCCATTGAGGATGA+AGG | 0.491914 | 4_1:-45810951 | Msa0550390:CDS |
| AGTTTGCAACCACATAGGTA+TGG | 0.497796 | 4_1:+45810922 | None:intergenic |
| TCAGTTATTATCCTTGGGGA+TGG | 0.500827 | 4_1:-45810837 | Msa0550390:CDS |
| CAAATTTCGTAGGGCCATTG+AGG | 0.507301 | 4_1:-45810958 | Msa0550390:CDS |
| CGAAATCATGGAGTGAATGA+AGG | 0.517474 | 4_1:-45811005 | Msa0550390:CDS |
| ACATCATTTCCAAATTCAGA+TGG | 0.518619 | 4_1:+45811032 | None:intergenic |
| ATACTAAGGCCAAATTTCGT+AGG | 0.520792 | 4_1:-45810968 | Msa0550390:CDS |
| GGGAATTCCTTCATCCTCAA+TGG | 0.522128 | 4_1:+45810944 | None:intergenic |
| GTTTGCAACCACATAGGTAT+GGG | 0.531410 | 4_1:+45810923 | None:intergenic |
| GTAGTTGTTCCTACAGCCAT+CGG | 0.532196 | 4_1:+45813368 | None:intergenic |
| CTTGCTGCTATTAAAGAGGC+GGG | 0.539482 | 4_1:-45811360 | Msa0550390:CDS |
| TGATGTCAAATATATCACTT+TGG | 0.539498 | 4_1:-45809855 | Msa0550390:CDS |
| AATGATGTGGACCGAAATCA+TGG | 0.540715 | 4_1:-45811017 | Msa0550390:CDS |
| TATGAAATTGATCCCTCCAC+TGG | 0.542638 | 4_1:-45809902 | Msa0550390:CDS |
| TTATGACCTTAACCAAACTC+TGG | 0.550214 | 4_1:+45811445 | None:intergenic |
| CAACACTAATTATCTTCTCT+AGG | 0.554919 | 4_1:-45813406 | Msa0550390:five_prime_UTR |
| TACTAAGGCCAAATTTCGTA+GGG | 0.556755 | 4_1:-45810967 | Msa0550390:CDS |
| GTTGAAGCTAGCATTAAAGC+TGG | 0.557955 | 4_1:-45813299 | Msa0550390:CDS |
| CTTTGGTATTTCCATCCCCA+AGG | 0.559911 | 4_1:+45810826 | None:intergenic |
| CCTCGTATGAGAGCAAAAGT+AGG | 0.562684 | 4_1:+45813272 | None:intergenic |
| ATCTGAATTTGGAAATGATG+TGG | 0.563360 | 4_1:-45811030 | Msa0550390:CDS |
| TCAATAAGTTGTGATTGAGT+TGG | 0.574854 | 4_1:+45810879 | None:intergenic |
| TAAGTTGTGATTGAGTTGGT+AGG | 0.575098 | 4_1:+45810883 | None:intergenic |
| ACAAAGATTCTTGTAATAGG+AGG | 0.577252 | 4_1:-45813347 | Msa0550390:CDS |
| TTCTGAAGCTTCTACTCCAG+TGG | 0.580723 | 4_1:+45809886 | None:intergenic |
| TCTTCTCCCAAAGAGATACT+AGG | 0.582651 | 4_1:+45810466 | None:intergenic |
| ATTGTATGACAATGTGTTCG+TGG | 0.582720 | 4_1:+45810491 | None:intergenic |
| GGTTAAGGTCATAAAGCAAG+TGG | 0.584313 | 4_1:-45811436 | Msa0550390:CDS |
| CTCGTATGAGAGCAAAAGTA+GGG | 0.586027 | 4_1:+45813273 | None:intergenic |
| GATCCTTGCTGCTATTAAAG+AGG | 0.586795 | 4_1:-45811364 | Msa0550390:CDS |
| TCATGGAGTGAATGAAGGAA+AGG | 0.589497 | 4_1:-45811000 | Msa0550390:CDS |
| AGATTCAGTTATTATCCTTG+GGG | 0.592266 | 4_1:-45810841 | Msa0550390:CDS |
| TGTCTGGCTGGATATGTGAA+TGG | 0.595623 | 4_1:-45809938 | Msa0550390:CDS |
| AATAGGAGGAACAGGTTACG+TGG | 0.596910 | 4_1:-45813333 | Msa0550390:CDS |
| CCGCCTCTTTAATAGCAGCA+AGG | 0.600823 | 4_1:+45811361 | None:intergenic |
| CTTGGGGATGGAAATACCAA+AGG | 0.606722 | 4_1:-45810825 | Msa0550390:intron |
| CAAAACTATGTTGACACCCA+AGG | 0.607236 | 4_1:+45813199 | None:intergenic |
| CCTTGCTGCTATTAAAGAGG+CGG | 0.611304 | 4_1:-45811361 | Msa0550390:CDS |
| GTCACTTTAGTCCCTGAATG+GGG | 0.618825 | 4_1:+45809375 | None:intergenic |
| TGAAGCTTCTACTCCAGTGG+AGG | 0.620290 | 4_1:+45809889 | None:intergenic |
| GAGAAAGTTTGCAACCACAT+AGG | 0.622252 | 4_1:+45810917 | None:intergenic |
| TGGTTATTATCACTTAACAA+AGG | 0.628967 | 4_1:-45809785 | Msa0550390:CDS |
| ATCCAGCCAGACAAATTGCA+AGG | 0.631936 | 4_1:+45809948 | None:intergenic |
| TTGTATGACAATGTGTTCGT+GGG | 0.632280 | 4_1:+45810492 | None:intergenic |
| TGACCTTAACCAAACTCTGG+TGG | 0.638131 | 4_1:+45811448 | None:intergenic |
| AGGAATTCCCCATACCTATG+TGG | 0.644732 | 4_1:-45810931 | Msa0550390:CDS |
| TAACCAATTTAAGTAAAATG+GGG | 0.651754 | 4_1:+45809802 | None:intergenic |
| GAAGCTTCTACTCCAGTGGA+GGG | 0.651967 | 4_1:+45809890 | None:intergenic |
| TATGACAATGTGTTCGTGGG+AGG | 0.672276 | 4_1:+45810495 | None:intergenic |
| TTTGCAACCACATAGGTATG+GGG | 0.684763 | 4_1:+45810924 | None:intergenic |
| TGGATGATGGATGACTTGTG+TGG | 0.692486 | 4_1:+45813233 | None:intergenic |
| ATAGGAGGAACAGGTTACGT+GGG | 0.701959 | 4_1:-45813332 | Msa0550390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTATTTTTTTTAAA+AGG | - | chr4_1:45810061-45810080 | Msa0550390:intron | 0.0% |
| !!! | AAAAAAAGTTTTTTTATTTG+AGG | + | chr4_1:45810556-45810575 | None:intergenic | 10.0% |
| !!! | ATTATTGTAAGATTATTTTA+CGG | - | chr4_1:45810949-45810968 | Msa0550390:CDS | 10.0% |
| !! | ATAAATCAATAATAATTATG+AGG | + | chr4_1:45811160-45811179 | None:intergenic | 10.0% |
| !!! | AATGAATAACTTTTTTTTTT+TGG | - | chr4_1:45811532-45811551 | Msa0550390:intron | 10.0% |
| !!! | AAGTAAATTTCTAATTTTAA+AGG | + | chr4_1:45811937-45811956 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTATATTTAAAAC+CGG | + | chr4_1:45811974-45811993 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATACTATTATG+CGG | - | chr4_1:45813041-45813060 | Msa0550390:intron | 10.0% |
| !!! | ATAATCCATGAAATTTTTTA+AGG | - | chr4_1:45810406-45810425 | Msa0550390:CDS | 15.0% |
| !! | AAGTTAAATTTAATTCTTTG+TGG | + | chr4_1:45810778-45810797 | None:intergenic | 15.0% |
| !!! | AATAATTTTTCAACTAATTG+AGG | - | chr4_1:45812412-45812431 | Msa0550390:intron | 15.0% |
| !! | TTTAGTGTAATTATATGTAT+CGG | + | chr4_1:45812576-45812595 | None:intergenic | 15.0% |
| !! | TTAAGATTATATGCATAATA+AGG | - | chr4_1:45812684-45812703 | Msa0550390:intron | 15.0% |
| !! | ATAACCAATTTAAGTAAAAT+GGG | + | chr4_1:45812922-45812941 | None:intergenic | 15.0% |
| !! | AATAACCAATTTAAGTAAAA+TGG | + | chr4_1:45812923-45812942 | None:intergenic | 15.0% |
| !!! | ATTGCAGCTTTAAAAAAAAA+TGG | + | chr4_1:45809636-45809655 | None:intergenic | 20.0% |
| !! | ATGATAATAAGTGGTTAATT+TGG | + | chr4_1:45810157-45810176 | None:intergenic | 20.0% |
| !! | TTAGTTGACTAAAATAAGAT+AGG | - | chr4_1:45810221-45810240 | Msa0550390:intron | 20.0% |
| !!! | ATATGTATTTTGGTAAACAA+CGG | + | chr4_1:45810279-45810298 | None:intergenic | 20.0% |
| !! | AAAGTCCTTAAAAAATTTCA+TGG | + | chr4_1:45810414-45810433 | None:intergenic | 20.0% |
| !! | GATATCATTTACTAAGTTTA+CGG | + | chr4_1:45810464-45810483 | None:intergenic | 20.0% |
| !! | AACTTAGTAAATGATATCTA+CGG | - | chr4_1:45810466-45810485 | Msa0550390:CDS | 20.0% |
| !! | TTAAATTTAATTCTTTGTGG+TGG | + | chr4_1:45810775-45810794 | None:intergenic | 20.0% |
| !! | TATAATTCTTTCTTATACAG+AGG | - | chr4_1:45811659-45811678 | Msa0550390:intron | 20.0% |
| !!! | AATATAGAGAATTTTGTTCA+AGG | + | chr4_1:45812202-45812221 | None:intergenic | 20.0% |
| !! | CTTAAAAAAATCTATATTCC+AGG | - | chr4_1:45812291-45812310 | Msa0550390:intron | 20.0% |
| !!! | AGTATTGATTTATTCATTCA+AGG | - | chr4_1:45812456-45812475 | Msa0550390:intron | 20.0% |
| !! | TAACCAATTTAAGTAAAATG+GGG | + | chr4_1:45812921-45812940 | None:intergenic | 20.0% |
| !! | GCTAGTATATTGTTTAATTA+AGG | - | chr4_1:45812980-45812999 | Msa0550390:intron | 20.0% |
| !! | ACAAATCAATTTCTTTGTTA+TGG | - | chr4_1:45813007-45813026 | Msa0550390:intron | 20.0% |
| !!! | CAAATCAATTTCTTTGTTAT+GGG | - | chr4_1:45813008-45813027 | Msa0550390:intron | 20.0% |
| !! | TCAAAGATAGAAAAAAATGT+AGG | - | chr4_1:45813078-45813097 | Msa0550390:intron | 20.0% |
| !! | CAAAGATAGAAAAAAATGTA+GGG | - | chr4_1:45813079-45813098 | Msa0550390:intron | 20.0% |
| !! | AAAGATAGAAAAAAATGTAG+GGG | - | chr4_1:45813080-45813099 | Msa0550390:intron | 20.0% |
| ! | ACTACAAAGATTCTTGTAAT+AGG | - | chr4_1:45809370-45809389 | Msa0550390:three_prime_UTR | 25.0% |
| !! | TCTGTGGTTTTCTTTTAAAT+CGG | + | chr4_1:45809710-45809729 | None:intergenic | 25.0% |
| !! | CGAATATTCTTTTATGTGAT+TGG | - | chr4_1:45809761-45809780 | Msa0550390:exon | 25.0% |
| !! | GTTCTTTTGTAAAAATCTCT+CGG | - | chr4_1:45809786-45809805 | Msa0550390:CDS | 25.0% |
| ! | AGCTGTAAAATGATAATAAG+TGG | + | chr4_1:45810166-45810185 | None:intergenic | 25.0% |
| !! | TTGAAATCACTTTAGAAACA+CGG | + | chr4_1:45810516-45810535 | None:intergenic | 25.0% |
| ! | GTGTAAAGAAACAATTACAA+AGG | - | chr4_1:45810668-45810687 | Msa0550390:intron | 25.0% |
| !!! | AATAATGCCACTTTTGTATT+TGG | + | chr4_1:45810743-45810762 | None:intergenic | 25.0% |
| ! | TGATTTATAACACGTTGTTA+TGG | - | chr4_1:45811172-45811191 | Msa0550390:intron | 25.0% |
| ! | GATTTATAACACGTTGTTAT+GGG | - | chr4_1:45811173-45811192 | Msa0550390:intron | 25.0% |
| ! | ATTTATAACACGTTGTTATG+GGG | - | chr4_1:45811174-45811193 | Msa0550390:intron | 25.0% |
| !!! | ATTGATGTTGATTTTTTGAC+AGG | - | chr4_1:45811236-45811255 | Msa0550390:intron | 25.0% |
| !!! | TTGATGTTGATTTTTTGACA+GGG | - | chr4_1:45811237-45811256 | Msa0550390:intron | 25.0% |
| ! | AGGATAATAACTGAATCTAA+TGG | + | chr4_1:45811877-45811896 | None:intergenic | 25.0% |
| ! | TTAGATTCAGTTATTATCCT+TGG | - | chr4_1:45811877-45811896 | Msa0550390:intron | 25.0% |
| ! | TAGATTCAGTTATTATCCTT+GGG | - | chr4_1:45811878-45811897 | Msa0550390:intron | 25.0% |
| !!! | ATATTTGTGCTTTTTACCTT+TGG | + | chr4_1:45811914-45811933 | None:intergenic | 25.0% |
| !! | TGTTTATATTTAAAACCGGA+GGG | + | chr4_1:45811970-45811989 | None:intergenic | 25.0% |
| !! | TTGTTTATATTTAAAACCGG+AGG | + | chr4_1:45811971-45811990 | None:intergenic | 25.0% |
| ! | AAAGTGATATATTTGACATC+AGG | + | chr4_1:45812866-45812885 | None:intergenic | 25.0% |
| ! | TGATGTCAAATATATCACTT+TGG | - | chr4_1:45812865-45812884 | Msa0550390:intron | 25.0% |
| ! | TGGTTATTATCACTTAACAA+AGG | - | chr4_1:45812935-45812954 | Msa0550390:intron | 25.0% |
| ! | TTGCAATTTATCTTCATTCA+TGG | - | chr4_1:45813303-45813322 | Msa0550390:CDS | 25.0% |
| !!! | AAGACAAGATACATTTTTTG+GGG | + | chr4_1:45813376-45813395 | None:intergenic | 25.0% |
| !!! | CAAGACAAGATACATTTTTT+GGG | + | chr4_1:45813377-45813396 | None:intergenic | 25.0% |
| !!! | ACAAGACAAGATACATTTTT+TGG | + | chr4_1:45813378-45813397 | None:intergenic | 25.0% |
| CAACACTAATTATCTTCTCT+AGG | - | chr4_1:45809314-45809333 | Msa0550390:three_prime_UTR | 30.0% | |
| ACAAAGATTCTTGTAATAGG+AGG | - | chr4_1:45809373-45809392 | Msa0550390:three_prime_UTR | 30.0% | |
| ATCCAAAGTTTCAATACCTT+GGG | - | chr4_1:45809505-45809524 | Msa0550390:intron | 30.0% | |
| AACAAAGTCATGAAAAGAAC+TGG | + | chr4_1:45809605-45809624 | None:intergenic | 30.0% | |
| ! | GGTTTTCTTTTAAATCGGTT+AGG | + | chr4_1:45809705-45809724 | None:intergenic | 30.0% |
| AAAAATCTCTCGGATGAAAT+TGG | - | chr4_1:45809796-45809815 | Msa0550390:CDS | 30.0% | |
| ACCGAGCAATTTATTATTAG+CGG | - | chr4_1:45810087-45810106 | Msa0550390:intron | 30.0% | |
| TCCGCTAATAATAAATTGCT+CGG | + | chr4_1:45810091-45810110 | None:intergenic | 30.0% | |
| GAAACACGGCATTTATATAT+AGG | + | chr4_1:45810502-45810521 | None:intergenic | 30.0% | |
| AATGAATCCTCTTTAGTACA+AGG | - | chr4_1:45810605-45810624 | Msa0550390:intron | 30.0% | |
| ! | ACTGACAACTTGTAATTTTG+GGG | + | chr4_1:45810650-45810669 | None:intergenic | 30.0% |
| ! | CACTGACAACTTGTAATTTT+GGG | + | chr4_1:45810651-45810670 | None:intergenic | 30.0% |
| ! | ACACTGACAACTTGTAATTT+TGG | + | chr4_1:45810652-45810671 | None:intergenic | 30.0% |
| ! | AAAACATTTTACACGTCTGT+GGG | + | chr4_1:45810829-45810848 | None:intergenic | 30.0% |
| ! | AAAAACATTTTACACGTCTG+TGG | + | chr4_1:45810830-45810849 | None:intergenic | 30.0% |
| ATGAAGTACATTGTTGCTAT+TGG | + | chr4_1:45810863-45810882 | None:intergenic | 30.0% | |
| GTACGTTGTTTGGTATTTAT+TGG | - | chr4_1:45811201-45811220 | Msa0550390:intron | 30.0% | |
| GTTGTTTGGTATTTATTGGT+AGG | - | chr4_1:45811205-45811224 | Msa0550390:intron | 30.0% | |
| ! | ATTTTGTATGTATGCACTGT+CGG | + | chr4_1:45811622-45811641 | None:intergenic | 30.0% |
| ACATCATTTCCAAATTCAGA+TGG | + | chr4_1:45811691-45811710 | None:intergenic | 30.0% | |
| ATCTGAATTTGGAAATGATG+TGG | - | chr4_1:45811690-45811709 | Msa0550390:intron | 30.0% | |
| AAAGGCTGTATTTGATACTA+AGG | - | chr4_1:45811738-45811757 | Msa0550390:intron | 30.0% | |
| TCAATAAGTTGTGATTGAGT+TGG | + | chr4_1:45811844-45811863 | None:intergenic | 30.0% | |
| AGATTCAGTTATTATCCTTG+GGG | - | chr4_1:45811879-45811898 | Msa0550390:intron | 30.0% | |
| ! | AGAATTTTGTTCAAGGTTCT+TGG | + | chr4_1:45812195-45812214 | None:intergenic | 30.0% |
| ATGAATGCAGATACAAACAT+TGG | + | chr4_1:45812655-45812674 | None:intergenic | 30.0% | |
| TCACCTTATCCTGTAAATAT+GGG | - | chr4_1:45812749-45812768 | Msa0550390:intron | 30.0% | |
| TCTATCTTTGACTCTATTGA+TGG | + | chr4_1:45813069-45813088 | None:intergenic | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | chr4_1:45813153-45813172 | None:intergenic | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | chr4_1:45813154-45813173 | None:intergenic | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | chr4_1:45813274-45813293 | Msa0550390:CDS | 30.0% | |
| ! | GTCATATAGCAATTTTCCGA+TGG | - | chr4_1:45809336-45809355 | Msa0550390:three_prime_UTR | 35.0% |
| ATTCTTGTAATAGGAGGAAC+AGG | - | chr4_1:45809379-45809398 | Msa0550390:three_prime_UTR | 35.0% | |
| ! | GGTATTGAAACTTTGGATGA+TGG | + | chr4_1:45809503-45809522 | None:intergenic | 35.0% |
| CATCCAAAGTTTCAATACCT+TGG | - | chr4_1:45809504-45809523 | Msa0550390:intron | 35.0% | |
| CGAAATGTGATGAGTGTAAT+CGG | - | chr4_1:45809670-45809689 | Msa0550390:intron | 35.0% | |
| !! | CCATTTTTCAGATCAATCTG+TGG | + | chr4_1:45809726-45809745 | None:intergenic | 35.0% |
| CCACAGATTGATCTGAAAAA+TGG | - | chr4_1:45809723-45809742 | Msa0550390:three_prime_UTR | 35.0% | |
| TGATATTCATGTGTGCTGTA+TGG | + | chr4_1:45809839-45809858 | None:intergenic | 35.0% | |
| TCGATACCTAGACATTGTAA+CGG | - | chr4_1:45810695-45810714 | Msa0550390:intron | 35.0% | |
| TTGTATTTGGTACTCAGAGA+TGG | + | chr4_1:45810730-45810749 | None:intergenic | 35.0% | |
| CTGAGTACCAAATACAAAAG+TGG | - | chr4_1:45810733-45810752 | Msa0550390:intron | 35.0% | |
| GTTATACCGTTAAAGCAAAG+TGG | + | chr4_1:45810900-45810919 | None:intergenic | 35.0% | |
| TTATGACCTTAACCAAACTC+TGG | + | chr4_1:45811278-45811297 | None:intergenic | 35.0% | |
| AGGTTCTTTCCATCTGAATT+TGG | - | chr4_1:45811679-45811698 | Msa0550390:intron | 35.0% | |
| CTTCATTCACTCCATGATTT+CGG | + | chr4_1:45811717-45811736 | None:intergenic | 35.0% | |
| ATACTAAGGCCAAATTTCGT+AGG | - | chr4_1:45811752-45811771 | Msa0550390:intron | 35.0% | |
| TACTAAGGCCAAATTTCGTA+GGG | - | chr4_1:45811753-45811772 | Msa0550390:intron | 35.0% | |
| !! | TAAGTTGTGATTGAGTTGGT+AGG | + | chr4_1:45811840-45811859 | None:intergenic | 35.0% |
| TTGTATGACAATGTGTTCGT+GGG | + | chr4_1:45812231-45812250 | None:intergenic | 35.0% | |
| ATTGTATGACAATGTGTTCG+TGG | + | chr4_1:45812232-45812251 | None:intergenic | 35.0% | |
| ACAATGACCTAGTATCTCTT+TGG | - | chr4_1:45812247-45812266 | Msa0550390:intron | 35.0% | |
| CAATGACCTAGTATCTCTTT+GGG | - | chr4_1:45812248-45812267 | Msa0550390:intron | 35.0% | |
| !! | CAAGTACTGAAGATGATTCA+AGG | - | chr4_1:45812318-45812337 | Msa0550390:intron | 35.0% |
| ACACAAACACTCCTAAGATT+AGG | - | chr4_1:45812504-45812523 | Msa0550390:intron | 35.0% | |
| TACAAACATTGGACATGACA+AGG | + | chr4_1:45812644-45812663 | None:intergenic | 35.0% | |
| GTCACCTTATCCTGTAAATA+TGG | - | chr4_1:45812748-45812767 | Msa0550390:intron | 35.0% | |
| ! | GCACCCCATTTTACTTAAAT+TGG | - | chr4_1:45812915-45812934 | Msa0550390:intron | 35.0% |
| ACTAACGAAGTCTACATTCA+GGG | - | chr4_1:45813210-45813229 | Msa0550390:CDS | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr4_1:45813227-45813246 | Msa0550390:CDS | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | chr4_1:45813273-45813292 | Msa0550390:CDS | 35.0% | |
| GTTGAAGCTAGCATTAAAGC+TGG | - | chr4_1:45809421-45809440 | Msa0550390:three_prime_UTR | 40.0% | |
| CTCGTATGAGAGCAAAAGTA+GGG | + | chr4_1:45809450-45809469 | None:intergenic | 40.0% | |
| !! | CACCCAAGGTATTGAAACTT+TGG | + | chr4_1:45809510-45809529 | None:intergenic | 40.0% |
| CAAAACTATGTTGACACCCA+AGG | + | chr4_1:45809524-45809543 | None:intergenic | 40.0% | |
| ! | CTTGGGTGTCAACATAGTTT+TGG | - | chr4_1:45809522-45809541 | Msa0550390:intron | 40.0% |
| TTCATGTGTGCTGTATGGTT+CGG | + | chr4_1:45809834-45809853 | None:intergenic | 40.0% | |
| GAGTTCACCTTGTACTAAAG+AGG | + | chr4_1:45810615-45810634 | None:intergenic | 40.0% | |
| TACAAGGTGAACTCAAGATC+AGG | - | chr4_1:45810621-45810640 | Msa0550390:intron | 40.0% | |
| CGATACCTAGACATTGTAAC+GGG | - | chr4_1:45810696-45810715 | Msa0550390:intron | 40.0% | |
| TATTTGGTACTCAGAGATGG+TGG | + | chr4_1:45810727-45810746 | None:intergenic | 40.0% | |
| TACCGTTAAAGCAAAGTGGA+GGG | + | chr4_1:45810896-45810915 | None:intergenic | 40.0% | |
| ATACCGTTAAAGCAAAGTGG+AGG | + | chr4_1:45810897-45810916 | None:intergenic | 40.0% | |
| ATTGTACATGTCAAGAGCTC+AGG | + | chr4_1:45811106-45811125 | None:intergenic | 40.0% | |
| ATGGGGTTTAGTACGTTGTT+TGG | - | chr4_1:45811191-45811210 | Msa0550390:intron | 40.0% | |
| TATATACGACCACCAGAGTT+TGG | - | chr4_1:45811263-45811282 | Msa0550390:intron | 40.0% | |
| GGTTAAGGTCATAAAGCAAG+TGG | - | chr4_1:45811284-45811303 | Msa0550390:intron | 40.0% | |
| GATCCTTGCTGCTATTAAAG+AGG | - | chr4_1:45811356-45811375 | Msa0550390:CDS | 40.0% | |
| AATGATGTGGACCGAAATCA+TGG | - | chr4_1:45811703-45811722 | Msa0550390:intron | 40.0% | |
| CGAAATCATGGAGTGAATGA+AGG | - | chr4_1:45811715-45811734 | Msa0550390:intron | 40.0% | |
| TCATGGAGTGAATGAAGGAA+AGG | - | chr4_1:45811720-45811739 | Msa0550390:intron | 40.0% | |
| TTTGCAACCACATAGGTATG+GGG | + | chr4_1:45811799-45811818 | None:intergenic | 40.0% | |
| GTTTGCAACCACATAGGTAT+GGG | + | chr4_1:45811800-45811819 | None:intergenic | 40.0% | |
| AGTTTGCAACCACATAGGTA+TGG | + | chr4_1:45811801-45811820 | None:intergenic | 40.0% | |
| GAGAAAGTTTGCAACCACAT+AGG | + | chr4_1:45811806-45811825 | None:intergenic | 40.0% | |
| TCAGTTATTATCCTTGGGGA+TGG | - | chr4_1:45811883-45811902 | Msa0550390:intron | 40.0% | |
| CAAGGTTCTTGGATCATCAA+TGG | + | chr4_1:45812184-45812203 | None:intergenic | 40.0% | |
| TCTTCTCCCAAAGAGATACT+AGG | + | chr4_1:45812257-45812276 | None:intergenic | 40.0% | |
| ATCTTCAGTACTTGCTTTCC+TGG | + | chr4_1:45812312-45812331 | None:intergenic | 40.0% | |
| TACAACACATGTCTCACACT+GGG | + | chr4_1:45812535-45812554 | None:intergenic | 40.0% | |
| ATACAACACATGTCTCACAC+TGG | + | chr4_1:45812536-45812555 | None:intergenic | 40.0% | |
| AGGCCCATATTTACAGGATA+AGG | + | chr4_1:45812755-45812774 | None:intergenic | 40.0% | |
| ATTGCAAGGCCCATATTTAC+AGG | + | chr4_1:45812761-45812780 | None:intergenic | 40.0% | |
| TATGAAATTGATCCCTCCAC+TGG | - | chr4_1:45812818-45812837 | Msa0550390:intron | 40.0% | |
| CACTTTGGATGAGTACTTTG+AGG | - | chr4_1:45812880-45812899 | Msa0550390:intron | 40.0% | |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr4_1:45813106-45813125 | Msa0550390:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr4_1:45813107-45813126 | Msa0550390:intron | 40.0% |
| GACTAACGAAGTCTACATTC+AGG | - | chr4_1:45813209-45813228 | Msa0550390:CDS | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr4_1:45813107-45813126 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr4_1:45813106-45813125 | None:intergenic | 40.0% |
| ! | AGCAATTTTCCGATGGCTGT+AGG | - | chr4_1:45809343-45809362 | Msa0550390:three_prime_UTR | 45.0% |
| GTAGTTGTTCCTACAGCCAT+CGG | + | chr4_1:45809355-45809374 | None:intergenic | 45.0% | |
| AATAGGAGGAACAGGTTACG+TGG | - | chr4_1:45809387-45809406 | Msa0550390:three_prime_UTR | 45.0% | |
| ATAGGAGGAACAGGTTACGT+GGG | - | chr4_1:45809388-45809407 | Msa0550390:three_prime_UTR | 45.0% | |
| CCTCGTATGAGAGCAAAAGT+AGG | + | chr4_1:45809451-45809470 | None:intergenic | 45.0% | |
| !! | CCTACTTTTGCTCTCATACG+AGG | - | chr4_1:45809448-45809467 | Msa0550390:intron | 45.0% |
| !! | TGGATGATGGATGACTTGTG+TGG | + | chr4_1:45809490-45809509 | None:intergenic | 45.0% |
| CTCCCTCCACTTTGCTTTAA+CGG | - | chr4_1:45810891-45810910 | Msa0550390:CDS | 45.0% | |
| TGACCTTAACCAAACTCTGG+TGG | + | chr4_1:45811275-45811294 | None:intergenic | 45.0% | |
| CCTTGCTGCTATTAAAGAGG+CGG | - | chr4_1:45811359-45811378 | Msa0550390:CDS | 45.0% | |
| CTTGCTGCTATTAAAGAGGC+GGG | - | chr4_1:45811360-45811379 | Msa0550390:CDS | 45.0% | |
| TAAAGAGGCGGGAAACGTTA+AGG | - | chr4_1:45811371-45811390 | Msa0550390:CDS | 45.0% | |
| CTCAATGGCCCTACGAAATT+TGG | + | chr4_1:45811764-45811783 | None:intergenic | 45.0% | |
| CAAATTTCGTAGGGCCATTG+AGG | - | chr4_1:45811762-45811781 | Msa0550390:intron | 45.0% | |
| GGGAATTCCTTCATCCTCAA+TGG | + | chr4_1:45811779-45811798 | None:intergenic | 45.0% | |
| AGGAATTCCCCATACCTATG+TGG | - | chr4_1:45811789-45811808 | Msa0550390:intron | 45.0% | |
| CTTTGGTATTTCCATCCCCA+AGG | + | chr4_1:45811897-45811916 | None:intergenic | 45.0% | |
| CTTGGGGATGGAAATACCAA+AGG | - | chr4_1:45811895-45811914 | Msa0550390:intron | 45.0% | |
| TACTTATCACACACACCCTC+CGG | - | chr4_1:45811952-45811971 | Msa0550390:intron | 45.0% | |
| TATGACAATGTGTTCGTGGG+AGG | + | chr4_1:45812228-45812247 | None:intergenic | 45.0% | |
| TATGGGCCTTGCAATTTGTC+TGG | - | chr4_1:45812766-45812785 | Msa0550390:intron | 45.0% | |
| ATCCAGCCAGACAAATTGCA+AGG | + | chr4_1:45812775-45812794 | None:intergenic | 45.0% | |
| TGTCTGGCTGGATATGTGAA+TGG | - | chr4_1:45812782-45812801 | Msa0550390:intron | 45.0% | |
| !! | TTCTGAAGCTTCTACTCCAG+TGG | + | chr4_1:45812837-45812856 | None:intergenic | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+GGG | - | chr4_1:45813108-45813127 | Msa0550390:intron | 45.0% |
| TATGCAAAACAGTCCCTGCA+TGG | - | chr4_1:45813166-45813185 | Msa0550390:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr4_1:45813178-45813197 | Msa0550390:intron | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr4_1:45813182-45813201 | None:intergenic | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr4_1:45813242-45813261 | Msa0550390:CDS | 45.0% | |
| ! | GTCACTTTAGTCCCTGAATG+GGG | + | chr4_1:45813108-45813127 | None:intergenic | 45.0% |
| !!! | ATTAATATAAATATGTATTT+TGG | + | chr4_1:45810289-45810308 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAAGAATAAAAAA+TGG | - | chr4_1:45810570-45810589 | Msa0550390:CDS | 5.0% |
| !!! | TAATATTTTTAATAATTTGA+TGG | - | chr4_1:45811563-45811582 | Msa0550390:intron | 5.0% |
| TCGGACCCGTTACAATGTCT+AGG | + | chr4_1:45810704-45810723 | None:intergenic | 50.0% | |
| ! | TGGTACTCAGAGATGGTGGT+CGG | + | chr4_1:45810723-45810742 | None:intergenic | 50.0% |
| CGACCACCAGAGTTTGGTTA+AGG | - | chr4_1:45811269-45811288 | Msa0550390:intron | 50.0% | |
| CCGCCTCTTTAATAGCAGCA+AGG | + | chr4_1:45811362-45811381 | None:intergenic | 50.0% | |
| ACTGGGACACGCCTAATCTT+AGG | + | chr4_1:45812518-45812537 | None:intergenic | 50.0% | |
| GAAGCTTCTACTCCAGTGGA+GGG | + | chr4_1:45812833-45812852 | None:intergenic | 50.0% | |
| TGAAGCTTCTACTCCAGTGG+AGG | + | chr4_1:45812834-45812853 | None:intergenic | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | + | chr4_1:45813334-45813353 | None:intergenic | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | + | chr4_1:45813333-45813352 | None:intergenic | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr4_1:45813177-45813196 | Msa0550390:intron | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr4_1:45813183-45813202 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr4_1:45813241-45813260 | Msa0550390:CDS | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | - | chr4_1:45813333-45813352 | Msa0550390:CDS | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | - | chr4_1:45813334-45813353 | Msa0550390:CDS | 50.0% | |
| CGTAGGGCCATTGAGGATGA+AGG | - | chr4_1:45811769-45811788 | Msa0550390:intron | 55.0% | |
| GGCCTTGCAATTTGTCTGGC+TGG | - | chr4_1:45812770-45812789 | Msa0550390:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 45809311 | 45813431 | 45809311 | ID=Msa0550390;Name=Msa0550390 |
| chr4_1 | mRNA | 45809311 | 45813431 | 45809311 | ID=Msa0550390-mRNA-1;Parent=Msa0550390;Name=Msa0550390-mRNA-1;_AED=0.04;_eAED=0.04;_QI=44|1|1|1|0.8|0.66|6|192|330 |
| chr4_1 | exon | 45809311 | 45809447 | 45809311 | ID=Msa0550390-mRNA-1:exon:12122;Parent=Msa0550390-mRNA-1 |
| chr4_1 | exon | 45809714 | 45809995 | 45809714 | ID=Msa0550390-mRNA-1:exon:12121;Parent=Msa0550390-mRNA-1 |
| chr4_1 | exon | 45810403 | 45810606 | 45810403 | ID=Msa0550390-mRNA-1:exon:12120;Parent=Msa0550390-mRNA-1 |
| chr4_1 | exon | 45810826 | 45811063 | 45810826 | ID=Msa0550390-mRNA-1:exon:12119;Parent=Msa0550390-mRNA-1 |
| chr4_1 | exon | 45811350 | 45811484 | 45811350 | ID=Msa0550390-mRNA-1:exon:12118;Parent=Msa0550390-mRNA-1 |
| chr4_1 | exon | 45813199 | 45813431 | 45813199 | ID=Msa0550390-mRNA-1:exon:12117;Parent=Msa0550390-mRNA-1 |
| chr4_1 | five_prime_UTR | 45813388 | 45813431 | 45813388 | ID=Msa0550390-mRNA-1:five_prime_utr;Parent=Msa0550390-mRNA-1 |
| chr4_1 | CDS | 45813199 | 45813387 | 45813199 | ID=Msa0550390-mRNA-1:cds;Parent=Msa0550390-mRNA-1 |
| chr4_1 | CDS | 45811350 | 45811484 | 45811350 | ID=Msa0550390-mRNA-1:cds;Parent=Msa0550390-mRNA-1 |
| chr4_1 | CDS | 45810826 | 45811063 | 45810826 | ID=Msa0550390-mRNA-1:cds;Parent=Msa0550390-mRNA-1 |
| chr4_1 | CDS | 45810403 | 45810606 | 45810403 | ID=Msa0550390-mRNA-1:cds;Parent=Msa0550390-mRNA-1 |
| chr4_1 | CDS | 45809769 | 45809995 | 45809769 | ID=Msa0550390-mRNA-1:cds;Parent=Msa0550390-mRNA-1 |
| chr4_1 | three_prime_UTR | 45809714 | 45809768 | 45809714 | ID=Msa0550390-mRNA-1:three_prime_utr;Parent=Msa0550390-mRNA-1 |
| chr4_1 | three_prime_UTR | 45809311 | 45809447 | 45809311 | ID=Msa0550390-mRNA-1:three_prime_utr;Parent=Msa0550390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
