AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0606390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606390 MtrunA17_Chr4g0036041 100.000 164 0 0 1 164 1 164 2.70e-112 315
Msa0606390 MtrunA17_Chr8g0372131 100.000 164 0 0 1 164 1 164 2.70e-112 315
Msa0606390 MtrunA17_Chr5g0405201 98.171 164 3 0 1 164 1 164 3.81e-110 310
Msa0606390 MtrunA17_Chr7g0256611 36.129 155 93 3 10 158 111 265 2.04e-22 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606390 AT4G34720.1 98.780 164 2 0 1 164 1 164 1.26e-110 311
Msa0606390 AT4G38920.1 98.780 164 2 0 1 164 1 164 1.26e-110 311
Msa0606390 AT2G16510.1 98.780 164 2 0 1 164 1 164 1.26e-110 311
Msa0606390 AT1G19910.1 98.773 163 2 0 2 164 3 165 7.82e-110 310
Msa0606390 AT1G75630.1 100.000 161 0 0 4 164 6 166 8.18e-110 310
Msa0606390 AT1G75630.2 82.564 195 0 1 4 164 6 200 1.06e-102 293
Msa0606390 AT4G38920.2 100.000 138 0 0 27 164 1 138 1.26e-91 263
Msa0606390 AT4G34720.2 100.000 138 0 0 27 164 5 142 1.46e-91 263
Msa0606390 AT1G19910.2 98.333 120 2 0 2 121 3 122 3.87e-78 228
Msa0606390 AT2G25610.1 35.484 155 94 3 10 158 19 173 2.11e-22 88.6
Msa0606390 AT4G32530.1 35.032 157 96 3 8 158 19 175 2.49e-22 88.6
Msa0606390 AT2G25610.2 35.484 155 94 3 10 158 68 222 2.54e-22 89.4
Msa0606390 AT4G32530.2 29.412 187 96 4 8 158 19 205 5.17e-16 72.4

Find 73 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGTTATGGCTGGTGTTT+TGG 0.212764 4_2:-52669282 Msa0606390:CDS
GACACATTTCATAAGGTAAA+AGG 0.215527 4_2:+52667870 None:intergenic
GCTGAAGCTCTTGCCCTTTA+CGG 0.242588 4_2:-52668155 Msa0606390:CDS
CTTTCTGCTGGTATGGCTAT+TGG 0.251819 4_2:-52669137 Msa0606390:CDS
GATGAAACTGCACCCTTCTT+TGG 0.254630 4_2:-52669750 Msa0606390:CDS
GGTCTTGCTTGTGGTCTTGC+CGG 0.261576 4_2:-52669161 Msa0606390:CDS
GCACCCTTCTTTGGCTTCCT+TGG 0.282736 4_2:-52669741 Msa0606390:CDS
ATCATTCCAACGAAAAGTTT+TGG 0.295044 4_2:+52668194 None:intergenic
CAAAGTAAGCTCAAATAATA+TGG 0.325870 4_2:+52667844 None:intergenic
ATTCGCAACTAAATCATTAC+AGG 0.346399 4_2:+52667797 None:intergenic
AGGTAATAAGATTTGGCCTT+TGG 0.348886 4_2:+52669212 None:intergenic
ATATAAATTGTATGCATTTG+TGG 0.368301 4_2:-52667776 Msa0606390:three_prime_UTR
GCCCTTTACGGTCTTATTGT+TGG 0.370662 4_2:-52668143 Msa0606390:CDS
ACCAACAATAAGACCGTAAA+GGG 0.386486 4_2:+52668142 None:intergenic
ATTGCTGTTATTATCAGTAC+TGG 0.402048 4_2:-52669242 Msa0606390:CDS
AATAGACTTCATCACGAGTT+CGG 0.407292 4_2:+52669310 None:intergenic
TTGTTGGTGATGCTGGTGTT+AGG 0.408515 4_2:-52669112 Msa0606390:intron
GTCTATTGTACCCGTTGTTA+TGG 0.408680 4_2:-52669294 Msa0606390:CDS
TAGCTCCACCTGTCATTTGA+TGG 0.411425 4_2:-52667944 Msa0606390:three_prime_UTR
ATTGGAATTGTTGGTGATGC+TGG 0.414887 4_2:-52669119 Msa0606390:CDS
GTTGTGCGGTTAGTGATGTT+TGG 0.418606 4_2:-52668005 Msa0606390:three_prime_UTR
ATAGACTTCATCACGAGTTC+GGG 0.420978 4_2:+52669311 None:intergenic
GTCTTGCTTGTGGTCTTGCC+GGG 0.426237 4_2:-52669160 Msa0606390:CDS
GCAGTTTCATCGCCGCTGAA+TGG 0.444149 4_2:+52669762 None:intergenic
TATTTGTAAAATACTGCAAC+TGG 0.446806 4_2:+52667979 None:intergenic
TGCCGGGCTTTCTGCTGGTA+TGG 0.448874 4_2:-52669144 Msa0606390:CDS
AGTCTAGAGCCGAGTAAGTA+AGG 0.456892 4_2:-52668094 Msa0606390:exon
GGTATGGCTATTGGAATTGT+TGG 0.458567 4_2:-52669128 Msa0606390:CDS
GATGTGCATATCCATCAAAA+AGG 0.459551 4_2:+52669192 None:intergenic
GGTTAGTGAACGTGGATGAT+TGG 0.460078 4_2:+52669898 None:intergenic
CCCTCACCTTCTTAATAAGA+AGG 0.460587 4_2:+52668039 None:intergenic
TGGTGTTGGTGTGGCTTCGA+TGG 0.461273 4_2:-52669345 Msa0606390:CDS
CACCAACCTTCTTATTAAGA+AGG 0.461603 4_2:-52668045 Msa0606390:three_prime_UTR
CTTCAGCAAAGATGAGGATA+AGG 0.463411 4_2:+52668171 None:intergenic
GGTCTTGCCGGGCTTTCTGC+TGG 0.464436 4_2:-52669149 Msa0606390:CDS
CTTTCGTCTGGTCTTGCTTG+TGG 0.465084 4_2:-52669170 Msa0606390:CDS
ATTATCTTGTCTTCACGTGC+TGG 0.465707 4_2:-52668119 Msa0606390:CDS
ACACATTTCATAAGGTAAAA+GGG 0.481597 4_2:+52667871 None:intergenic
TTACTTACTCGGCTCTAGAC+TGG 0.484955 4_2:+52668096 None:intergenic
GGATATGCACATCTTTCGTC+TGG 0.487366 4_2:-52669182 Msa0606390:CDS
ATTGTACCCGTTGTTATGGC+TGG 0.491715 4_2:-52669290 Msa0606390:CDS
CGAGAGCAGCTGCGGCTCCA+AGG 0.495410 4_2:+52669724 None:intergenic
AACACAGCTCCTTACTTACT+CGG 0.497367 4_2:+52668085 None:intergenic
AAAACACCAGCCATAACAAC+GGG 0.500989 4_2:+52669284 None:intergenic
CGACGTCGTTGCAGTATCAA+TGG 0.505821 4_2:-52669787 Msa0606390:exon
AGCCATACCAGCAGAAAGCC+CGG 0.512314 4_2:+52669142 None:intergenic
CACCTTCTTAATAAGAAGGT+TGG 0.517354 4_2:+52668043 None:intergenic
ATGGCATGACACATTTCATA+AGG 0.518430 4_2:+52667863 None:intergenic
CTTCTTAATAAGAAGGTTGG+TGG 0.527041 4_2:+52668046 None:intergenic
ATTAGATTCAGCTATAACGT+TGG 0.528856 4_2:-52667742 Msa0606390:three_prime_UTR
GGCTCCAAGGAAGCCAAAGA+AGG 0.530335 4_2:+52669737 None:intergenic
TCTCTGTTGTGTTGTGGTAG+AGG 0.530494 4_2:+52669858 None:intergenic
GGTGTTGGTGTGGCTTCGAT+GGG 0.543393 4_2:-52669344 Msa0606390:CDS
GAAGGTATGGGAGCTGCATA+CGG 0.543753 4_2:-52669380 Msa0606390:intron
TACCAACAATAAGACCGTAA+AGG 0.543826 4_2:+52668141 None:intergenic
TACAAACACCATCAAATGAC+AGG 0.554764 4_2:+52667936 None:intergenic
ACCTTCTTATTAAGAAGGTG+AGG 0.559555 4_2:-52668040 Msa0606390:three_prime_UTR
ATGATGATGGTTAGTGAACG+TGG 0.567269 4_2:+52669890 None:intergenic
CCTTCTTATTAAGAAGGTGA+GGG 0.574431 4_2:-52668039 Msa0606390:three_prime_UTR
GCTCCAAGGAAGCCAAAGAA+GGG 0.585616 4_2:+52669738 None:intergenic
GAGGAAGATGATGATGATGA+TGG 0.588092 4_2:+52669877 None:intergenic
TTTCGATCTCTGTTGTGTTG+TGG 0.595958 4_2:+52669852 None:intergenic
GGAACAGCGAAGAGTGGTGT+TGG 0.601402 4_2:-52669359 Msa0606390:CDS
AGCGAAGAGTGGTGTTGGTG+TGG 0.611591 4_2:-52669354 Msa0606390:CDS
CTTCTTATTAAGAAGGTGAG+GGG 0.629841 4_2:-52668038 Msa0606390:three_prime_UTR
TGAGAAGACGAGAGCAGCTG+CGG 0.632351 4_2:+52669716 None:intergenic
CAAGAGCTTCAGCAAAGATG+AGG 0.635794 4_2:+52668165 None:intergenic
CAAAACACCAGCCATAACAA+CGG 0.640096 4_2:+52669283 None:intergenic
TTCTTATTAAGAAGGTGAGG+GGG 0.649897 4_2:-52668037 Msa0606390:three_prime_UTR
CAGTACTGGAATTAATCCAA+AGG 0.650672 4_2:-52669228 Msa0606390:CDS
GTATCAATGGCTCCATTCAG+CGG 0.659340 4_2:-52669774 Msa0606390:exon
AAACACCATCAAATGACAGG+TGG 0.667417 4_2:+52667939 None:intergenic
GCATACGGAACAGCGAAGAG+TGG 0.668854 4_2:-52669365 Msa0606390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTTTTTTAAATAAGA+TGG + chr4_2:52668103-52668122 None:intergenic 10.0%
!!! ATGTTTTTTTTTAAATAAGA+TGG + chr4_2:52668103-52668122 None:intergenic 10.0%
!! TGAAATTCAAATTATTCAAA+CGG + chr4_2:52668066-52668085 None:intergenic 15.0%
!!! TTAAACTTGAAATTTGTTTT+CGG - chr4_2:52668568-52668587 Msa0606390:intron 15.0%
!!! GTTGTTTTTATAAGATATAT+TGG - chr4_2:52668766-52668785 Msa0606390:intron 15.0%
!! TATGAAAATAAGTTGTAAAA+AGG - chr4_2:52668795-52668814 Msa0606390:intron 15.0%
!!! TTGTATTAGTAGTTTATTTT+TGG - chr4_2:52669704-52669723 Msa0606390:intron 15.0%
!! TGAAATTCAAATTATTCAAA+CGG + chr4_2:52668066-52668085 None:intergenic 15.0%
!!! TTAAACTTGAAATTTGTTTT+CGG - chr4_2:52668568-52668587 Msa0606390:intron 15.0%
!!! GTTGTTTTTATAAGATATAT+TGG - chr4_2:52668766-52668785 Msa0606390:intron 15.0%
!! TATGAAAATAAGTTGTAAAA+AGG - chr4_2:52668795-52668814 Msa0606390:intron 15.0%
!!! TTGTATTAGTAGTTTATTTT+TGG - chr4_2:52669704-52669723 Msa0606390:intron 15.0%
!! AGAAAAAGAGAAATTGAAAA+GGG + chr4_2:52667962-52667981 None:intergenic 20.0%
!! TAGAAAAAGAGAAATTGAAA+AGG + chr4_2:52667963-52667982 None:intergenic 20.0%
!!! CGAAATTGAAGATTTAAAAT+TGG + chr4_2:52667986-52668005 None:intergenic 20.0%
!! TTTCAATTGAATTGAATTGA+TGG - chr4_2:52668217-52668236 Msa0606390:intron 20.0%
!! ATCAAAAAGGTAATAAGATT+TGG + chr4_2:52668420-52668439 None:intergenic 20.0%
!!! AAATCTTATTACCTTTTTGA+TGG - chr4_2:52668419-52668438 Msa0606390:intron 20.0%
!!! TAAACTTGAAATTTGTTTTC+GGG - chr4_2:52668569-52668588 Msa0606390:intron 20.0%
!!! GACTTAAATATGCATTTTAT+CGG - chr4_2:52668928-52668947 Msa0606390:intron 20.0%
!!! TCCTACTATATTTTTGAAAA+AGG + chr4_2:52669249-52669268 None:intergenic 20.0%
!!! TTTTCAAAAATATAGTAGGA+TGG - chr4_2:52669249-52669268 Msa0606390:CDS 20.0%
!! TTCAAAGGAAGAAATTTATT+AGG + chr4_2:52669375-52669394 None:intergenic 20.0%
!! ATATAAATTGTATGCATTTG+TGG - chr4_2:52669846-52669865 Msa0606390:five_prime_UTR 20.0%
!! AGAAAAAGAGAAATTGAAAA+GGG + chr4_2:52667962-52667981 None:intergenic 20.0%
!! TAGAAAAAGAGAAATTGAAA+AGG + chr4_2:52667963-52667982 None:intergenic 20.0%
!!! CGAAATTGAAGATTTAAAAT+TGG + chr4_2:52667986-52668005 None:intergenic 20.0%
!! TTTCAATTGAATTGAATTGA+TGG - chr4_2:52668217-52668236 Msa0606390:intron 20.0%
!! ATCAAAAAGGTAATAAGATT+TGG + chr4_2:52668420-52668439 None:intergenic 20.0%
!!! AAATCTTATTACCTTTTTGA+TGG - chr4_2:52668419-52668438 Msa0606390:intron 20.0%
!!! TAAACTTGAAATTTGTTTTC+GGG - chr4_2:52668569-52668588 Msa0606390:intron 20.0%
!!! GACTTAAATATGCATTTTAT+CGG - chr4_2:52668928-52668947 Msa0606390:intron 20.0%
!!! TCCTACTATATTTTTGAAAA+AGG + chr4_2:52669249-52669268 None:intergenic 20.0%
!!! TTTTCAAAAATATAGTAGGA+TGG - chr4_2:52669249-52669268 Msa0606390:CDS 20.0%
!! TTCAAAGGAAGAAATTTATT+AGG + chr4_2:52669375-52669394 None:intergenic 20.0%
!! ATATAAATTGTATGCATTTG+TGG - chr4_2:52669846-52669865 Msa0606390:five_prime_UTR 20.0%
! TTCAAATTATTCAAACGGAT+CGG + chr4_2:52668061-52668080 None:intergenic 25.0%
! TTATTAGCAATTAGCGATTA+GGG - chr4_2:52668153-52668172 Msa0606390:CDS 25.0%
!! AATTCTTTTGCCTTTCTAAT+TGG - chr4_2:52668536-52668555 Msa0606390:intron 25.0%
!!! GATTTGTTTTTTGTCTGATT+TGG - chr4_2:52668593-52668612 Msa0606390:intron 25.0%
!!! TAAGTTTTGTGAGATTGTTT+GGG + chr4_2:52668857-52668876 None:intergenic 25.0%
!!! ATAAGTTTTGTGAGATTGTT+TGG + chr4_2:52668858-52668877 None:intergenic 25.0%
! TATTTAAGTCTCACACATTA+GGG + chr4_2:52668918-52668937 None:intergenic 25.0%
! ATATTTAAGTCTCACACATT+AGG + chr4_2:52668919-52668938 None:intergenic 25.0%
! TCAATGTTATACTGTTATTC+TGG - chr4_2:52669039-52669058 Msa0606390:intron 25.0%
! TGAAGTCGAATTAAATGAAA+TGG - chr4_2:52669117-52669136 Msa0606390:CDS 25.0%
! GAAGTCGAATTAAATGAAAT+GGG - chr4_2:52669118-52669137 Msa0606390:CDS 25.0%
!!! ATATTTGGATTGGTAGTATA+GGG + chr4_2:52669193-52669212 None:intergenic 25.0%
!!! TATATTTGGATTGGTAGTAT+AGG + chr4_2:52669194-52669213 None:intergenic 25.0%
!!! TATATTTTTGAAAAAGGCCA+AGG + chr4_2:52669243-52669262 None:intergenic 25.0%
!!! GCCTTTTTCAAAAATATAGT+AGG - chr4_2:52669245-52669264 Msa0606390:CDS 25.0%
! AGGAAGAAATTTATTAGGAA+TGG + chr4_2:52669370-52669389 None:intergenic 25.0%
! TATTTGTAAAATACTGCAAC+TGG + chr4_2:52669646-52669665 None:intergenic 25.0%
! ACACATTTCATAAGGTAAAA+GGG + chr4_2:52669754-52669773 None:intergenic 25.0%
! CAAAGTAAGCTCAAATAATA+TGG + chr4_2:52669781-52669800 None:intergenic 25.0%
! TTCAAATTATTCAAACGGAT+CGG + chr4_2:52668061-52668080 None:intergenic 25.0%
! TTATTAGCAATTAGCGATTA+GGG - chr4_2:52668153-52668172 Msa0606390:CDS 25.0%
!! AATTCTTTTGCCTTTCTAAT+TGG - chr4_2:52668536-52668555 Msa0606390:intron 25.0%
!!! GATTTGTTTTTTGTCTGATT+TGG - chr4_2:52668593-52668612 Msa0606390:intron 25.0%
!!! TAAGTTTTGTGAGATTGTTT+GGG + chr4_2:52668857-52668876 None:intergenic 25.0%
!!! ATAAGTTTTGTGAGATTGTT+TGG + chr4_2:52668858-52668877 None:intergenic 25.0%
! TATTTAAGTCTCACACATTA+GGG + chr4_2:52668918-52668937 None:intergenic 25.0%
! ATATTTAAGTCTCACACATT+AGG + chr4_2:52668919-52668938 None:intergenic 25.0%
! TCAATGTTATACTGTTATTC+TGG - chr4_2:52669039-52669058 Msa0606390:intron 25.0%
! TGAAGTCGAATTAAATGAAA+TGG - chr4_2:52669117-52669136 Msa0606390:CDS 25.0%
! GAAGTCGAATTAAATGAAAT+GGG - chr4_2:52669118-52669137 Msa0606390:CDS 25.0%
!!! ATATTTGGATTGGTAGTATA+GGG + chr4_2:52669193-52669212 None:intergenic 25.0%
!!! TATATTTGGATTGGTAGTAT+AGG + chr4_2:52669194-52669213 None:intergenic 25.0%
!!! TATATTTTTGAAAAAGGCCA+AGG + chr4_2:52669243-52669262 None:intergenic 25.0%
!!! GCCTTTTTCAAAAATATAGT+AGG - chr4_2:52669245-52669264 Msa0606390:CDS 25.0%
! AGGAAGAAATTTATTAGGAA+TGG + chr4_2:52669370-52669389 None:intergenic 25.0%
! TATTTGTAAAATACTGCAAC+TGG + chr4_2:52669646-52669665 None:intergenic 25.0%
! ACACATTTCATAAGGTAAAA+GGG + chr4_2:52669754-52669773 None:intergenic 25.0%
! CAAAGTAAGCTCAAATAATA+TGG + chr4_2:52669781-52669800 None:intergenic 25.0%
AAGAGAAATTGAAAAGGGAT+CGG + chr4_2:52667957-52667976 None:intergenic 30.0%
GTTATTAGCAATTAGCGATT+AGG - chr4_2:52668152-52668171 Msa0606390:CDS 30.0%
CAATTGAATTGAATTGATGG+AGG - chr4_2:52668220-52668239 Msa0606390:intron 30.0%
! ATTGCTGTTATTATCAGTAC+TGG - chr4_2:52668380-52668399 Msa0606390:intron 30.0%
ATCACACAAACCAATTAGAA+AGG + chr4_2:52668549-52668568 None:intergenic 30.0%
ATCAATGTAAATAAGAACCG+AGG + chr4_2:52668967-52668986 None:intergenic 30.0%
! CGGTTCTTATTTACATTGAT+TGG - chr4_2:52668967-52668986 Msa0606390:intron 30.0%
!! ATTGATTGGCTGTTTTCTTT+GGG - chr4_2:52668981-52669000 Msa0606390:intron 30.0%
!! GTTGGTGGTATAACAATATA+GGG - chr4_2:52669089-52669108 Msa0606390:intron 30.0%
ACCAATCCAAATATACCTTT+AGG - chr4_2:52669199-52669218 Msa0606390:CDS 30.0%
! TCCTAAAGGTATATTTGGAT+TGG + chr4_2:52669203-52669222 None:intergenic 30.0%
AATCCAAATATACCTTTAGG+AGG - chr4_2:52669202-52669221 Msa0606390:CDS 30.0%
! ATCCTATTGATAACAATTGC+AGG + chr4_2:52669319-52669338 None:intergenic 30.0%
GCAATTGTTATCAATAGGAT+AGG - chr4_2:52669319-52669338 Msa0606390:CDS 30.0%
TTATCAATAGGATAGGATAC+TGG - chr4_2:52669326-52669345 Msa0606390:CDS 30.0%
TATCAATAGGATAGGATACT+GGG - chr4_2:52669327-52669346 Msa0606390:CDS 30.0%
! ATCATTCCAACGAAAAGTTT+TGG + chr4_2:52669431-52669450 None:intergenic 30.0%
GACACATTTCATAAGGTAAA+AGG + chr4_2:52669755-52669774 None:intergenic 30.0%
ATTCGCAACTAAATCATTAC+AGG + chr4_2:52669828-52669847 None:intergenic 30.0%
ATTAGATTCAGCTATAACGT+TGG - chr4_2:52669880-52669899 Msa0606390:five_prime_UTR 30.0%
AAGAGAAATTGAAAAGGGAT+CGG + chr4_2:52667957-52667976 None:intergenic 30.0%
GTTATTAGCAATTAGCGATT+AGG - chr4_2:52668152-52668171 Msa0606390:CDS 30.0%
CAATTGAATTGAATTGATGG+AGG - chr4_2:52668220-52668239 Msa0606390:intron 30.0%
! ATTGCTGTTATTATCAGTAC+TGG - chr4_2:52668380-52668399 Msa0606390:intron 30.0%
ATCACACAAACCAATTAGAA+AGG + chr4_2:52668549-52668568 None:intergenic 30.0%
ATCAATGTAAATAAGAACCG+AGG + chr4_2:52668967-52668986 None:intergenic 30.0%
! CGGTTCTTATTTACATTGAT+TGG - chr4_2:52668967-52668986 Msa0606390:intron 30.0%
!! ATTGATTGGCTGTTTTCTTT+GGG - chr4_2:52668981-52669000 Msa0606390:intron 30.0%
!! GTTGGTGGTATAACAATATA+GGG - chr4_2:52669089-52669108 Msa0606390:intron 30.0%
ACCAATCCAAATATACCTTT+AGG - chr4_2:52669199-52669218 Msa0606390:CDS 30.0%
! TCCTAAAGGTATATTTGGAT+TGG + chr4_2:52669203-52669222 None:intergenic 30.0%
AATCCAAATATACCTTTAGG+AGG - chr4_2:52669202-52669221 Msa0606390:CDS 30.0%
! ATCCTATTGATAACAATTGC+AGG + chr4_2:52669319-52669338 None:intergenic 30.0%
GCAATTGTTATCAATAGGAT+AGG - chr4_2:52669319-52669338 Msa0606390:CDS 30.0%
TTATCAATAGGATAGGATAC+TGG - chr4_2:52669326-52669345 Msa0606390:CDS 30.0%
TATCAATAGGATAGGATACT+GGG - chr4_2:52669327-52669346 Msa0606390:CDS 30.0%
! ATCATTCCAACGAAAAGTTT+TGG + chr4_2:52669431-52669450 None:intergenic 30.0%
GACACATTTCATAAGGTAAA+AGG + chr4_2:52669755-52669774 None:intergenic 30.0%
ATTCGCAACTAAATCATTAC+AGG + chr4_2:52669828-52669847 None:intergenic 30.0%
ATTAGATTCAGCTATAACGT+TGG - chr4_2:52669880-52669899 Msa0606390:five_prime_UTR 30.0%
AGAGAAATTGAAAAGGGATC+GGG + chr4_2:52667956-52667975 None:intergenic 35.0%
TGAATTGAATTGATGGAGGA+AGG - chr4_2:52668224-52668243 Msa0606390:intron 35.0%
AATAGACTTCATCACGAGTT+CGG + chr4_2:52668315-52668334 None:intergenic 35.0%
! CAGTACTGGAATTAATCCAA+AGG - chr4_2:52668394-52668413 Msa0606390:intron 35.0%
! AGGTAATAAGATTTGGCCTT+TGG + chr4_2:52668413-52668432 None:intergenic 35.0%
GATGTGCATATCCATCAAAA+AGG + chr4_2:52668433-52668452 None:intergenic 35.0%
GATAAGTTGTTTACCCAAAC+AGG + chr4_2:52668649-52668668 None:intergenic 35.0%
TCAAATAAGCCAATCCAAAC+AGG - chr4_2:52668892-52668911 Msa0606390:intron 35.0%
! CATTTTATCGGTGAACTTGT+GGG - chr4_2:52668940-52668959 Msa0606390:intron 35.0%
!! CATTGATTGGCTGTTTTCTT+TGG - chr4_2:52668980-52668999 Msa0606390:intron 35.0%
! CTGTTTTCTTTGGGTATGTT+TGG - chr4_2:52668990-52669009 Msa0606390:intron 35.0%
! ATACTGTTATTCTGGTTGAC+TGG - chr4_2:52669047-52669066 Msa0606390:intron 35.0%
!! TTGACTGGTGTTTTTGTACA+TGG - chr4_2:52669062-52669081 Msa0606390:intron 35.0%
!! TGGTGTTTTTGTACATGGTT+TGG - chr4_2:52669067-52669086 Msa0606390:intron 35.0%
!!! GTTTTTGTACATGGTTTGGT+TGG - chr4_2:52669071-52669090 Msa0606390:intron 35.0%
!! GGTTGGTGGTATAACAATAT+AGG - chr4_2:52669088-52669107 Msa0606390:intron 35.0%
! GTACCTCCTAAAGGTATATT+TGG + chr4_2:52669208-52669227 None:intergenic 35.0%
TGTTAACATGTACCTCCTAA+AGG + chr4_2:52669217-52669236 None:intergenic 35.0%
TAGGATGGTAGCATTTATGA+TGG - chr4_2:52669264-52669283 Msa0606390:CDS 35.0%
AGCCTGCAATTGTTATCAAT+AGG - chr4_2:52669314-52669333 Msa0606390:CDS 35.0%
GCAGGAGAATAATTGTTCAA+AGG + chr4_2:52669390-52669409 None:intergenic 35.0%
ACCAACAATAAGACCGTAAA+GGG + chr4_2:52669483-52669502 None:intergenic 35.0%
TACCAACAATAAGACCGTAA+AGG + chr4_2:52669484-52669503 None:intergenic 35.0%
CTTCTTAATAAGAAGGTTGG+TGG + chr4_2:52669579-52669598 None:intergenic 35.0%
CACCAACCTTCTTATTAAGA+AGG - chr4_2:52669577-52669596 Msa0606390:intron 35.0%
CACCTTCTTAATAAGAAGGT+TGG + chr4_2:52669582-52669601 None:intergenic 35.0%
ACCTTCTTATTAAGAAGGTG+AGG - chr4_2:52669582-52669601 Msa0606390:intron 35.0%
CCTTCTTATTAAGAAGGTGA+GGG - chr4_2:52669583-52669602 Msa0606390:intron 35.0%
CTTCTTATTAAGAAGGTGAG+GGG - chr4_2:52669584-52669603 Msa0606390:intron 35.0%
TTCTTATTAAGAAGGTGAGG+GGG - chr4_2:52669585-52669604 Msa0606390:intron 35.0%
TACAAACACCATCAAATGAC+AGG + chr4_2:52669689-52669708 None:intergenic 35.0%
ATGGCATGACACATTTCATA+AGG + chr4_2:52669762-52669781 None:intergenic 35.0%
AGAGAAATTGAAAAGGGATC+GGG + chr4_2:52667956-52667975 None:intergenic 35.0%
TGAATTGAATTGATGGAGGA+AGG - chr4_2:52668224-52668243 Msa0606390:intron 35.0%
AATAGACTTCATCACGAGTT+CGG + chr4_2:52668315-52668334 None:intergenic 35.0%
! CAGTACTGGAATTAATCCAA+AGG - chr4_2:52668394-52668413 Msa0606390:intron 35.0%
! AGGTAATAAGATTTGGCCTT+TGG + chr4_2:52668413-52668432 None:intergenic 35.0%
GATGTGCATATCCATCAAAA+AGG + chr4_2:52668433-52668452 None:intergenic 35.0%
GATAAGTTGTTTACCCAAAC+AGG + chr4_2:52668649-52668668 None:intergenic 35.0%
TCAAATAAGCCAATCCAAAC+AGG - chr4_2:52668892-52668911 Msa0606390:intron 35.0%
! CATTTTATCGGTGAACTTGT+GGG - chr4_2:52668940-52668959 Msa0606390:intron 35.0%
!! CATTGATTGGCTGTTTTCTT+TGG - chr4_2:52668980-52668999 Msa0606390:intron 35.0%
! CTGTTTTCTTTGGGTATGTT+TGG - chr4_2:52668990-52669009 Msa0606390:intron 35.0%
! ATACTGTTATTCTGGTTGAC+TGG - chr4_2:52669047-52669066 Msa0606390:intron 35.0%
!! TTGACTGGTGTTTTTGTACA+TGG - chr4_2:52669062-52669081 Msa0606390:intron 35.0%
!! TGGTGTTTTTGTACATGGTT+TGG - chr4_2:52669067-52669086 Msa0606390:intron 35.0%
!!! GTTTTTGTACATGGTTTGGT+TGG - chr4_2:52669071-52669090 Msa0606390:intron 35.0%
!! GGTTGGTGGTATAACAATAT+AGG - chr4_2:52669088-52669107 Msa0606390:intron 35.0%
! GTACCTCCTAAAGGTATATT+TGG + chr4_2:52669208-52669227 None:intergenic 35.0%
TGTTAACATGTACCTCCTAA+AGG + chr4_2:52669217-52669236 None:intergenic 35.0%
TAGGATGGTAGCATTTATGA+TGG - chr4_2:52669264-52669283 Msa0606390:CDS 35.0%
AGCCTGCAATTGTTATCAAT+AGG - chr4_2:52669314-52669333 Msa0606390:CDS 35.0%
GCAGGAGAATAATTGTTCAA+AGG + chr4_2:52669390-52669409 None:intergenic 35.0%
ACCAACAATAAGACCGTAAA+GGG + chr4_2:52669483-52669502 None:intergenic 35.0%
TACCAACAATAAGACCGTAA+AGG + chr4_2:52669484-52669503 None:intergenic 35.0%
CTTCTTAATAAGAAGGTTGG+TGG + chr4_2:52669579-52669598 None:intergenic 35.0%
CACCAACCTTCTTATTAAGA+AGG - chr4_2:52669577-52669596 Msa0606390:intron 35.0%
CACCTTCTTAATAAGAAGGT+TGG + chr4_2:52669582-52669601 None:intergenic 35.0%
ACCTTCTTATTAAGAAGGTG+AGG - chr4_2:52669582-52669601 Msa0606390:intron 35.0%
CCTTCTTATTAAGAAGGTGA+GGG - chr4_2:52669583-52669602 Msa0606390:intron 35.0%
CTTCTTATTAAGAAGGTGAG+GGG - chr4_2:52669584-52669603 Msa0606390:intron 35.0%
TTCTTATTAAGAAGGTGAGG+GGG - chr4_2:52669585-52669604 Msa0606390:intron 35.0%
TACAAACACCATCAAATGAC+AGG + chr4_2:52669689-52669708 None:intergenic 35.0%
ATGGCATGACACATTTCATA+AGG + chr4_2:52669762-52669781 None:intergenic 35.0%
!! ATGATGATGGTTAGTGAACG+TGG + chr4_2:52667735-52667754 None:intergenic 40.0%
! GAGGAAGATGATGATGATGA+TGG + chr4_2:52667748-52667767 None:intergenic 40.0%
TTTCGATCTCTGTTGTGTTG+TGG + chr4_2:52667773-52667792 None:intergenic 40.0%
TGAAAAGGGATCGGGAAAAA+AGG + chr4_2:52667948-52667967 None:intergenic 40.0%
TGAATTGATGGAGGAAGGTA+TGG - chr4_2:52668229-52668248 Msa0606390:intron 40.0%
! GAATTGATGGAGGAAGGTAT+GGG - chr4_2:52668230-52668249 Msa0606390:intron 40.0%
ATAGACTTCATCACGAGTTC+GGG + chr4_2:52668314-52668333 None:intergenic 40.0%
GTCTATTGTACCCGTTGTTA+TGG - chr4_2:52668328-52668347 Msa0606390:intron 40.0%
AAAACACCAGCCATAACAAC+GGG + chr4_2:52668341-52668360 None:intergenic 40.0%
CAAAACACCAGCCATAACAA+CGG + chr4_2:52668342-52668361 None:intergenic 40.0%
! GTTGTTATGGCTGGTGTTTT+GGG - chr4_2:52668341-52668360 Msa0606390:intron 40.0%
!! GCTGGTGTTTTGGGTATTTA+TGG - chr4_2:52668350-52668369 Msa0606390:intron 40.0%
GGTATGGCTATTGGAATTGT+TGG - chr4_2:52668494-52668513 Msa0606390:intron 40.0%
!! ATTGGAATTGTTGGTGATGC+TGG - chr4_2:52668503-52668522 Msa0606390:intron 40.0%
ATTGACACTTAGAGCCTGTT+TGG - chr4_2:52668632-52668651 Msa0606390:intron 40.0%
TTGACACTTAGAGCCTGTTT+GGG - chr4_2:52668633-52668652 Msa0606390:intron 40.0%
! GCATTTTATCGGTGAACTTG+TGG - chr4_2:52668939-52668958 Msa0606390:intron 40.0%
!! TTTGTACATGGTTTGGTTGG+TGG - chr4_2:52669074-52669093 Msa0606390:intron 40.0%
GGTGGTATAACAATATAGGG+TGG - chr4_2:52669092-52669111 Msa0606390:intron 40.0%
! ATTGGTAGTATAGGGTGGAA+TGG + chr4_2:52669185-52669204 None:intergenic 40.0%
!! TTTGGATTGGTAGTATAGGG+TGG + chr4_2:52669190-52669209 None:intergenic 40.0%
GGTACATGTTAACATGTCCT+TGG - chr4_2:52669223-52669242 Msa0606390:CDS 40.0%
CTTCAGCAAAGATGAGGATA+AGG + chr4_2:52669454-52669473 None:intergenic 40.0%
ATTATCTTGTCTTCACGTGC+TGG - chr4_2:52669503-52669522 Msa0606390:intron 40.0%
AACACAGCTCCTTACTTACT+CGG + chr4_2:52669540-52669559 None:intergenic 40.0%
CCCTCACCTTCTTAATAAGA+AGG + chr4_2:52669586-52669605 None:intergenic 40.0%
AAACACCATCAAATGACAGG+TGG + chr4_2:52669686-52669705 None:intergenic 40.0%
!! ATGATGATGGTTAGTGAACG+TGG + chr4_2:52667735-52667754 None:intergenic 40.0%
! GAGGAAGATGATGATGATGA+TGG + chr4_2:52667748-52667767 None:intergenic 40.0%
TTTCGATCTCTGTTGTGTTG+TGG + chr4_2:52667773-52667792 None:intergenic 40.0%
TGAAAAGGGATCGGGAAAAA+AGG + chr4_2:52667948-52667967 None:intergenic 40.0%
TGAATTGATGGAGGAAGGTA+TGG - chr4_2:52668229-52668248 Msa0606390:intron 40.0%
! GAATTGATGGAGGAAGGTAT+GGG - chr4_2:52668230-52668249 Msa0606390:intron 40.0%
ATAGACTTCATCACGAGTTC+GGG + chr4_2:52668314-52668333 None:intergenic 40.0%
GTCTATTGTACCCGTTGTTA+TGG - chr4_2:52668328-52668347 Msa0606390:intron 40.0%
AAAACACCAGCCATAACAAC+GGG + chr4_2:52668341-52668360 None:intergenic 40.0%
CAAAACACCAGCCATAACAA+CGG + chr4_2:52668342-52668361 None:intergenic 40.0%
! GTTGTTATGGCTGGTGTTTT+GGG - chr4_2:52668341-52668360 Msa0606390:intron 40.0%
!! GCTGGTGTTTTGGGTATTTA+TGG - chr4_2:52668350-52668369 Msa0606390:intron 40.0%
GGTATGGCTATTGGAATTGT+TGG - chr4_2:52668494-52668513 Msa0606390:intron 40.0%
!! ATTGGAATTGTTGGTGATGC+TGG - chr4_2:52668503-52668522 Msa0606390:intron 40.0%
ATTGACACTTAGAGCCTGTT+TGG - chr4_2:52668632-52668651 Msa0606390:intron 40.0%
TTGACACTTAGAGCCTGTTT+GGG - chr4_2:52668633-52668652 Msa0606390:intron 40.0%
! GCATTTTATCGGTGAACTTG+TGG - chr4_2:52668939-52668958 Msa0606390:intron 40.0%
!! TTTGTACATGGTTTGGTTGG+TGG - chr4_2:52669074-52669093 Msa0606390:intron 40.0%
GGTGGTATAACAATATAGGG+TGG - chr4_2:52669092-52669111 Msa0606390:intron 40.0%
! ATTGGTAGTATAGGGTGGAA+TGG + chr4_2:52669185-52669204 None:intergenic 40.0%
!! TTTGGATTGGTAGTATAGGG+TGG + chr4_2:52669190-52669209 None:intergenic 40.0%
GGTACATGTTAACATGTCCT+TGG - chr4_2:52669223-52669242 Msa0606390:CDS 40.0%
CTTCAGCAAAGATGAGGATA+AGG + chr4_2:52669454-52669473 None:intergenic 40.0%
ATTATCTTGTCTTCACGTGC+TGG - chr4_2:52669503-52669522 Msa0606390:intron 40.0%
AACACAGCTCCTTACTTACT+CGG + chr4_2:52669540-52669559 None:intergenic 40.0%
CCCTCACCTTCTTAATAAGA+AGG + chr4_2:52669586-52669605 None:intergenic 40.0%
AAACACCATCAAATGACAGG+TGG + chr4_2:52669686-52669705 None:intergenic 40.0%
TCTCTGTTGTGTTGTGGTAG+AGG + chr4_2:52667767-52667786 None:intergenic 45.0%
GTATCAATGGCTCCATTCAG+CGG - chr4_2:52667848-52667867 Msa0606390:three_prime_UTR 45.0%
GATGAAACTGCACCCTTCTT+TGG - chr4_2:52667872-52667891 Msa0606390:three_prime_UTR 45.0%
ATTGTACCCGTTGTTATGGC+TGG - chr4_2:52668332-52668351 Msa0606390:intron 45.0%
! CGTTGTTATGGCTGGTGTTT+TGG - chr4_2:52668340-52668359 Msa0606390:intron 45.0%
GGATATGCACATCTTTCGTC+TGG - chr4_2:52668440-52668459 Msa0606390:intron 45.0%
CTTTCTGCTGGTATGGCTAT+TGG - chr4_2:52668485-52668504 Msa0606390:intron 45.0%
!! TTGTTGGTGATGCTGGTGTT+AGG - chr4_2:52668510-52668529 Msa0606390:intron 45.0%
ACATTAGGGCCTGTTTGGAT+TGG + chr4_2:52668904-52668923 None:intergenic 45.0%
!!! AAGTTTTGGCTGCTGTGCAT+TGG + chr4_2:52669417-52669436 None:intergenic 45.0%
! CAGCAGCCAAAACTTTTCGT+TGG - chr4_2:52669422-52669441 Msa0606390:intron 45.0%
CAAGAGCTTCAGCAAAGATG+AGG + chr4_2:52669460-52669479 None:intergenic 45.0%
!! GCCCTTTACGGTCTTATTGT+TGG - chr4_2:52669479-52669498 Msa0606390:intron 45.0%
!! TTACTTACTCGGCTCTAGAC+TGG + chr4_2:52669529-52669548 None:intergenic 45.0%
! AGTCTAGAGCCGAGTAAGTA+AGG - chr4_2:52669528-52669547 Msa0606390:intron 45.0%
!!! GGGGGTGAATTTTAGTTGTG+CGG - chr4_2:52669603-52669622 Msa0606390:intron 45.0%
GTTGTGCGGTTAGTGATGTT+TGG - chr4_2:52669617-52669636 Msa0606390:intron 45.0%
! TAGCTCCACCTGTCATTTGA+TGG - chr4_2:52669678-52669697 Msa0606390:intron 45.0%
TCTCTGTTGTGTTGTGGTAG+AGG + chr4_2:52667767-52667786 None:intergenic 45.0%
GTATCAATGGCTCCATTCAG+CGG - chr4_2:52667848-52667867 Msa0606390:three_prime_UTR 45.0%
GATGAAACTGCACCCTTCTT+TGG - chr4_2:52667872-52667891 Msa0606390:three_prime_UTR 45.0%
ATTGTACCCGTTGTTATGGC+TGG - chr4_2:52668332-52668351 Msa0606390:intron 45.0%
! CGTTGTTATGGCTGGTGTTT+TGG - chr4_2:52668340-52668359 Msa0606390:intron 45.0%
GGATATGCACATCTTTCGTC+TGG - chr4_2:52668440-52668459 Msa0606390:intron 45.0%
CTTTCTGCTGGTATGGCTAT+TGG - chr4_2:52668485-52668504 Msa0606390:intron 45.0%
!! TTGTTGGTGATGCTGGTGTT+AGG - chr4_2:52668510-52668529 Msa0606390:intron 45.0%
ACATTAGGGCCTGTTTGGAT+TGG + chr4_2:52668904-52668923 None:intergenic 45.0%
!!! AAGTTTTGGCTGCTGTGCAT+TGG + chr4_2:52669417-52669436 None:intergenic 45.0%
! CAGCAGCCAAAACTTTTCGT+TGG - chr4_2:52669422-52669441 Msa0606390:intron 45.0%
CAAGAGCTTCAGCAAAGATG+AGG + chr4_2:52669460-52669479 None:intergenic 45.0%
!! GCCCTTTACGGTCTTATTGT+TGG - chr4_2:52669479-52669498 Msa0606390:intron 45.0%
!! TTACTTACTCGGCTCTAGAC+TGG + chr4_2:52669529-52669548 None:intergenic 45.0%
! AGTCTAGAGCCGAGTAAGTA+AGG - chr4_2:52669528-52669547 Msa0606390:intron 45.0%
!!! GGGGGTGAATTTTAGTTGTG+CGG - chr4_2:52669603-52669622 Msa0606390:intron 45.0%
GTTGTGCGGTTAGTGATGTT+TGG - chr4_2:52669617-52669636 Msa0606390:intron 45.0%
! TAGCTCCACCTGTCATTTGA+TGG - chr4_2:52669678-52669697 Msa0606390:intron 45.0%
!!! TCAATTAAAATTTTAAAAAA+TGG + chr4_2:52669151-52669170 None:intergenic 5.0%
!!! TCAATTAAAATTTTAAAAAA+TGG + chr4_2:52669151-52669170 None:intergenic 5.0%
CGACGTCGTTGCAGTATCAA+TGG - chr4_2:52667835-52667854 Msa0606390:three_prime_UTR 50.0%
GCTCCAAGGAAGCCAAAGAA+GGG + chr4_2:52667887-52667906 None:intergenic 50.0%
! GAAGGTATGGGAGCTGCATA+CGG - chr4_2:52668242-52668261 Msa0606390:intron 50.0%
!! CTTTCGTCTGGTCTTGCTTG+TGG - chr4_2:52668452-52668471 Msa0606390:intron 50.0%
CTCACACATTAGGGCCTGTT+TGG + chr4_2:52668909-52668928 None:intergenic 50.0%
GCTGAAGCTCTTGCCCTTTA+CGG - chr4_2:52669467-52669486 Msa0606390:intron 50.0%
CGACGTCGTTGCAGTATCAA+TGG - chr4_2:52667835-52667854 Msa0606390:three_prime_UTR 50.0%
GCTCCAAGGAAGCCAAAGAA+GGG + chr4_2:52667887-52667906 None:intergenic 50.0%
! GAAGGTATGGGAGCTGCATA+CGG - chr4_2:52668242-52668261 Msa0606390:intron 50.0%
!! CTTTCGTCTGGTCTTGCTTG+TGG - chr4_2:52668452-52668471 Msa0606390:intron 50.0%
CTCACACATTAGGGCCTGTT+TGG + chr4_2:52668909-52668928 None:intergenic 50.0%
GCTGAAGCTCTTGCCCTTTA+CGG - chr4_2:52669467-52669486 Msa0606390:intron 50.0%
GCAGTTTCATCGCCGCTGAA+TGG + chr4_2:52667863-52667882 None:intergenic 55.0%
! GCACCCTTCTTTGGCTTCCT+TGG - chr4_2:52667881-52667900 Msa0606390:three_prime_UTR 55.0%
GGCTCCAAGGAAGCCAAAGA+AGG + chr4_2:52667888-52667907 None:intergenic 55.0%
TGAGAAGACGAGAGCAGCTG+CGG + chr4_2:52667909-52667928 None:intergenic 55.0%
GCATACGGAACAGCGAAGAG+TGG - chr4_2:52668257-52668276 Msa0606390:intron 55.0%
GGAACAGCGAAGAGTGGTGT+TGG - chr4_2:52668263-52668282 Msa0606390:intron 55.0%
!! AGCGAAGAGTGGTGTTGGTG+TGG - chr4_2:52668268-52668287 Msa0606390:intron 55.0%
!! TGGTGTTGGTGTGGCTTCGA+TGG - chr4_2:52668277-52668296 Msa0606390:intron 55.0%
!! GGTGTTGGTGTGGCTTCGAT+GGG - chr4_2:52668278-52668297 Msa0606390:intron 55.0%
! GGTCTTGCTTGTGGTCTTGC+CGG - chr4_2:52668461-52668480 Msa0606390:intron 55.0%
! GTCTTGCTTGTGGTCTTGCC+GGG - chr4_2:52668462-52668481 Msa0606390:intron 55.0%
AGCCATACCAGCAGAAAGCC+CGG + chr4_2:52668483-52668502 None:intergenic 55.0%
TCGGTGAACTTGTGGGTCCT+CGG - chr4_2:52668947-52668966 Msa0606390:intron 55.0%
GCAGTTTCATCGCCGCTGAA+TGG + chr4_2:52667863-52667882 None:intergenic 55.0%
! GCACCCTTCTTTGGCTTCCT+TGG - chr4_2:52667881-52667900 Msa0606390:three_prime_UTR 55.0%
GGCTCCAAGGAAGCCAAAGA+AGG + chr4_2:52667888-52667907 None:intergenic 55.0%
TGAGAAGACGAGAGCAGCTG+CGG + chr4_2:52667909-52667928 None:intergenic 55.0%
GCATACGGAACAGCGAAGAG+TGG - chr4_2:52668257-52668276 Msa0606390:intron 55.0%
GGAACAGCGAAGAGTGGTGT+TGG - chr4_2:52668263-52668282 Msa0606390:intron 55.0%
!! AGCGAAGAGTGGTGTTGGTG+TGG - chr4_2:52668268-52668287 Msa0606390:intron 55.0%
!! TGGTGTTGGTGTGGCTTCGA+TGG - chr4_2:52668277-52668296 Msa0606390:intron 55.0%
!! GGTGTTGGTGTGGCTTCGAT+GGG - chr4_2:52668278-52668297 Msa0606390:intron 55.0%
! GGTCTTGCTTGTGGTCTTGC+CGG - chr4_2:52668461-52668480 Msa0606390:intron 55.0%
! GTCTTGCTTGTGGTCTTGCC+GGG - chr4_2:52668462-52668481 Msa0606390:intron 55.0%
AGCCATACCAGCAGAAAGCC+CGG + chr4_2:52668483-52668502 None:intergenic 55.0%
TCGGTGAACTTGTGGGTCCT+CGG - chr4_2:52668947-52668966 Msa0606390:intron 55.0%
TGCCGGGCTTTCTGCTGGTA+TGG - chr4_2:52668478-52668497 Msa0606390:intron 60.0%
!! CTGCTGTGCATTGGCTCTGC+AGG + chr4_2:52669408-52669427 None:intergenic 60.0%
TGCCGGGCTTTCTGCTGGTA+TGG - chr4_2:52668478-52668497 Msa0606390:intron 60.0%
!! CTGCTGTGCATTGGCTCTGC+AGG + chr4_2:52669408-52669427 None:intergenic 60.0%
GGTCTTGCCGGGCTTTCTGC+TGG - chr4_2:52668473-52668492 Msa0606390:intron 65.0%
GGTCTTGCCGGGCTTTCTGC+TGG - chr4_2:52668473-52668492 Msa0606390:intron 65.0%
CGAGAGCAGCTGCGGCTCCA+AGG + chr4_2:52667901-52667920 None:intergenic 70.0%
CGAGAGCAGCTGCGGCTCCA+AGG + chr4_2:52667901-52667920 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 52667725 52669919 52667725 ID=Msa0606390;Name=Msa0606390
chr4_2 mRNA 52667725 52669919 52667725 ID=Msa0606390-mRNA-1;Parent=Msa0606390;Name=Msa0606390-mRNA-1;_AED=0.01;_eAED=0.01;_QI=129|1|1|1|1|1|3|375|164
chr4_2 exon 52667725 52668232 52667725 ID=Msa0606390-mRNA-1:exon:12932;Parent=Msa0606390-mRNA-1
chr4_2 exon 52669113 52669398 52669113 ID=Msa0606390-mRNA-1:exon:12931;Parent=Msa0606390-mRNA-1
chr4_2 exon 52669715 52669919 52669715 ID=Msa0606390-mRNA-1:exon:12930;Parent=Msa0606390-mRNA-1
chr4_2 five_prime_UTR 52669791 52669919 52669791 ID=Msa0606390-mRNA-1:five_prime_utr;Parent=Msa0606390-mRNA-1
chr4_2 CDS 52669715 52669790 52669715 ID=Msa0606390-mRNA-1:cds;Parent=Msa0606390-mRNA-1
chr4_2 CDS 52669113 52669398 52669113 ID=Msa0606390-mRNA-1:cds;Parent=Msa0606390-mRNA-1
chr4_2 CDS 52668100 52668232 52668100 ID=Msa0606390-mRNA-1:cds;Parent=Msa0606390-mRNA-1
chr4_2 three_prime_UTR 52667725 52668099 52667725 ID=Msa0606390-mRNA-1:three_prime_utr;Parent=Msa0606390-mRNA-1
Gene Sequence

>Msa0606390

ATGGCTCCATTCAGCGGCGATGAAACTGCACCCTTCTTTGGCTTCCTTGGAGCCGCAGCTGCTCTCGTCTTCTCATGTATGGGAGCTGCATACGGAACAGCGAAGAGTGGTGTTGGTGTGGCTTCGATGGGTGTGATGAGACCCGAACTCGTGATGAAGTCTATTGTACCCGTTGTTATGGCTGGTGTTTTGGGTATTTATGGTCTTATTATTGCTGTTATTATCAGTACTGGAATTAATCCAAAGGCCAAATCTTATTACCTTTTTGATGGATATGCACATCTTTCGTCTGGTCTTGCTTGTGGTCTTGCCGGGCTTTCTGCTGGTATGGCTATTGGAATTGTTGGTGATGCTGGTGTTAGAGCCAATGCACAGCAGCCAAAACTTTTCGTTGGAATGATCCTTATCCTCATCTTTGCTGAAGCTCTTGCCCTTTACGGTCTTATTGTTGGTATTATCTTGTCTTCACGTGCTGGCCAGTCTAGAGCCGAGTAA
Protein sequence

>Msa0606390

MAPFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE*