AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0609080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609080 MtrunA17_Chr4g0042001 95.149 536 10 1 1 520 1 536 0.0 1048
Msa0609080 MtrunA17_Chr2g0319441 79.775 534 103 1 1 534 1 529 0.0 865
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609080 AT3G20720.2 69.850 534 158 3 1 534 1 531 0.0 771
Msa0609080 AT3G20720.1 67.228 534 155 4 1 534 1 514 0.0 728

Find 409 sgRNAs with CRISPR-Local

Find 1007 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGATCTCTATGCTTATTT+TGG 0.059819 4_2:+56437365 Msa0609080:three_prime_UTR
TTGCCACCTGTAACCTTCTT+TGG 0.149027 4_2:-56438469 None:intergenic
TCTGAATTATCAACAATTAT+AGG 0.175876 4_2:-56438075 None:intergenic
TTCTGGCAGCCCACTTCTTC+TGG 0.213817 4_2:-56437100 None:intergenic
AGAGTAATACTTGGGTTTAT+TGG 0.216425 4_2:+56438627 Msa0609080:three_prime_UTR
TTCTCCAGGTTTAGTATTCT+TGG 0.222391 4_2:-56437029 None:intergenic
CTTCTTCAAGTGCGGAAAAC+TGG 0.230357 4_2:-56438278 None:intergenic
TCTCTGTCTCTCTCTCAATT+TGG 0.246769 4_2:+56438897 Msa0609080:three_prime_UTR
GGGCTTTCATTTATTAGTTT+TGG 0.248557 4_2:-56440831 None:intergenic
AATATCTCCGCTTCAATATC+TGG 0.252049 4_2:+56437904 Msa0609080:three_prime_UTR
TTTCTGTGCATTAAAGATTC+TGG 0.252604 4_2:+56433721 Msa0609080:CDS
ATCCTGCTTGCTTCTGTCTC+TGG 0.256012 4_2:+56437054 Msa0609080:three_prime_UTR
TGAGTCTTCTTCTGTGAATA+TGG 0.256953 4_2:+56437535 Msa0609080:three_prime_UTR
GTTCCTTCAATGAGTGATAT+TGG 0.259902 4_2:+56437739 Msa0609080:three_prime_UTR
TGTGTGCGTAAGTTGCTTTC+TGG 0.260867 4_2:+56438576 Msa0609080:three_prime_UTR
TGACGGCAGCCCATTGTTAA+AGG 0.264086 4_2:+56437256 Msa0609080:three_prime_UTR
CACTACCTGGTTGGAGTCTC+AGG 0.266212 4_2:-56429959 None:intergenic
AATTTGCAAATTAGATTATT+AGG 0.271701 4_2:-56438799 None:intergenic
AAAATTATGATTACAGGTTT+GGG 0.272263 4_2:+56441267 Msa0609080:three_prime_UTR
CAACAGAAAATTATGATTAC+AGG 0.274803 4_2:+56441261 Msa0609080:three_prime_UTR
GAAAATTATGATTACAGGTT+TGG 0.274970 4_2:+56441266 Msa0609080:three_prime_UTR
ATCCCACCTTACTCTATCTT+TGG 0.279764 4_2:+56437124 Msa0609080:three_prime_UTR
GGGTTCGAAAACTTACAAAA+AGG 0.285478 4_2:+56438024 Msa0609080:three_prime_UTR
AGTTGCTTTCTGGATAATTA+AGG 0.287163 4_2:+56438586 Msa0609080:three_prime_UTR
GAATCATTGACTATCCATTT+TGG 0.293756 4_2:-56438868 None:intergenic
TAGAGTAAGGTGGGATGTTC+TGG 0.294002 4_2:-56437117 None:intergenic
TTGGATGACACTAGGAAATA+TGG 0.295423 4_2:+56438646 Msa0609080:three_prime_UTR
GAAGCAAATACTGGCACATT+TGG 0.295607 4_2:+56437146 Msa0609080:three_prime_UTR
TGCCACCTGTAACCTTCTTT+GGG 0.302617 4_2:-56438468 None:intergenic
AGAGGGGTGTGTGGGTTGTT+TGG 0.305087 4_2:-56428771 None:intergenic
AGAACTGACTGATGCAGTTC+AGG 0.305376 4_2:+56439600 Msa0609080:three_prime_UTR
CACCGCTAAAGTTGGAAAAT+TGG 0.305907 4_2:+56429244 Msa0609080:CDS
TACAGTTAAATCTTATTTGC+TGG 0.311610 4_2:+56436954 Msa0609080:CDS
AATGCTTTGGTCAACGATAT+TGG 0.311885 4_2:+56440921 Msa0609080:three_prime_UTR
CTACATCGGGTTGGAATACT+TGG 0.321958 4_2:+56437967 Msa0609080:three_prime_UTR
CTACAATTGCTTAAGCTAGA+AGG 0.323017 4_2:+56439901 Msa0609080:three_prime_UTR
AATGGAAGGTACTGGTTAAT+CGG 0.324022 4_2:-56428855 None:intergenic
AAGACTTCACCTCCTGTAAC+TGG 0.324242 4_2:+56441045 Msa0609080:three_prime_UTR
TTCTTCTGGCTGGCATCAAT+TGG 0.325455 4_2:-56437086 None:intergenic
AAATACTTAATTCCAGTTAC+AGG 0.326698 4_2:-56441057 None:intergenic
ACTAGAGAACCACCATCTTT+TGG 0.331312 4_2:-56438371 None:intergenic
GTATACGTTAGGCAGAAATA+AGG 0.331657 4_2:+56441140 Msa0609080:three_prime_UTR
CAGAGATCAGTTCAAATTAC+AGG 0.332409 4_2:+56429035 Msa0609080:CDS
GTGGAATGAAAGTGCGAAAA+TGG 0.332880 4_2:-56428873 None:intergenic
TATTGACTGTCAGTCTCTTA+TGG 0.333187 4_2:+56436648 Msa0609080:CDS
TTTGGATATTACAGTTCCTT+TGG 0.333463 4_2:+56436891 Msa0609080:CDS
TCATTGTCTACTTCATAAAA+TGG 0.334298 4_2:-56437868 None:intergenic
TACCTTAGCTTCGGGGTGTT+TGG 0.338978 4_2:-56428951 None:intergenic
GCATTAAATCTTGAAGAAAA+AGG 0.341836 4_2:-56438549 None:intergenic
GAATATATGTTTGTCTAAAC+AGG 0.343857 4_2:+56433500 Msa0609080:CDS
GACTGGTTGTTTGCTCTTGA+AGG 0.347404 4_2:+56438334 Msa0609080:three_prime_UTR
GTAGAATTCCAGCTGTTATA+CGG 0.351258 4_2:-56439882 None:intergenic
CTGCGGGTATTATGAGGGTT+GGG 0.353945 4_2:+56437288 Msa0609080:three_prime_UTR
CTTGGGCCTGATGGCGGTCC+AGG 0.354273 4_2:+56437985 Msa0609080:three_prime_UTR
CCAGGGAAGGGTCTTTCTAT+AGG 0.354329 4_2:+56438003 Msa0609080:three_prime_UTR
ACACCAGAAAGTGTCATAGA+AGG 0.354409 4_2:+56438247 Msa0609080:intron
CTATCAATTTGCACAATGAT+TGG 0.354992 4_2:-56429896 None:intergenic
TAATTGAATGCAAATTTCTC+TGG 0.355086 4_2:-56438727 None:intergenic
TGAAAGCCCACACAAATCTA+TGG 0.355867 4_2:+56440845 Msa0609080:three_prime_UTR
CTCTCTTCAGAAATTGGAAT+GGG 0.357334 4_2:+56432994 Msa0609080:intron
GAATTGTTTCTCCGATGAAT+TGG 0.358573 4_2:-56428904 None:intergenic
ATTTGAATGATAAAATTCAT+AGG 0.359030 4_2:-56438826 None:intergenic
TTGCCCATGACATGGGAATA+TGG 0.359240 4_2:+56439223 Msa0609080:three_prime_UTR
TCATCCATGTTAACCACTAA+TGG 0.360896 4_2:+56439571 Msa0609080:three_prime_UTR
TCCTTTGGATAAGGCCCAAT+TGG 0.363605 4_2:+56436906 Msa0609080:CDS
CAGTTCTTTAACTCCATTAG+TGG 0.364304 4_2:-56439584 None:intergenic
TACCTGCCAGCTTTCATTTG+TGG 0.365044 4_2:-56432621 None:intergenic
CGTGGATTCTGAGGAGCATT+TGG 0.368266 4_2:+56437679 Msa0609080:three_prime_UTR
ACCGTTCAGCTTTCTAATTT+AGG 0.373318 4_2:+56429063 Msa0609080:CDS
CAGGGAAGGGTCTTTCTATA+GGG 0.374110 4_2:+56438004 Msa0609080:three_prime_UTR
GGCAGCCCACTTCTTCTGGC+TGG 0.375185 4_2:-56437096 None:intergenic
AGTAGCCCAAAGAAGGTTAC+AGG 0.375767 4_2:+56438463 Msa0609080:three_prime_UTR
AGGTACTGGTTAATCGGGTT+CGG 0.382709 4_2:-56428849 None:intergenic
TGATTCCATACCTTAGCTTC+GGG 0.383222 4_2:-56428959 None:intergenic
AATTCTCTGGGATGGACTGC+TGG 0.384212 4_2:+56437176 Msa0609080:three_prime_UTR
TTCGGGTCAGTGAAAGCATT+TGG 0.386798 4_2:-56428831 None:intergenic
AGTATTCTTGGTTTCATTGA+AGG 0.387759 4_2:-56437017 None:intergenic
CTATCTTTGGAAGCAAATAC+TGG 0.387907 4_2:+56437137 Msa0609080:three_prime_UTR
CAATCATTGTGCAAATTGAT+AGG 0.388145 4_2:+56429897 Msa0609080:CDS
CTCCTCCTGCGGGTATTATG+AGG 0.389754 4_2:+56437282 Msa0609080:three_prime_UTR
TGGAATACACGCTCAAATAC+TGG 0.390863 4_2:+56428998 Msa0609080:CDS
TAGCTTCGGGGTGTTTGGTT+CGG 0.392887 4_2:-56428946 None:intergenic
GCAAATTGATAGGCTTGATT+TGG 0.396285 4_2:+56429907 Msa0609080:CDS
TTGATTCCATACCTTAGCTT+CGG 0.397758 4_2:-56428960 None:intergenic
TATTACAGTTCCTTTGGATA+AGG 0.397837 4_2:+56436897 Msa0609080:CDS
ACAGTTATCCATGGTATTAG+TGG 0.400721 4_2:+56438757 Msa0609080:three_prime_UTR
CATATTGAGATGGTACTTGC+AGG 0.401105 4_2:+56439495 Msa0609080:three_prime_UTR
CAATTTGGTTGTTAATGCTA+TGG 0.401540 4_2:+56438912 Msa0609080:three_prime_UTR
AATAACTTTGCTTGAGGAAG+TGG 0.401603 4_2:+56440875 Msa0609080:three_prime_UTR
ATAGTTACATCCACATTGTC+TGG 0.403359 4_2:-56438301 None:intergenic
GAATGATAAAATTCATAGGT+TGG 0.403964 4_2:-56438822 None:intergenic
AAGTTGGAAAATTGGAGATC+AGG 0.404085 4_2:+56429252 Msa0609080:CDS
ATTTGGGCGTCAGAATTCTC+TGG 0.404941 4_2:+56437163 Msa0609080:three_prime_UTR
AAAATATCAAAGTTCTAAAC+AGG 0.406467 4_2:-56439037 None:intergenic
TACTTGCAGGTTGTAGTTCA+AGG 0.407618 4_2:+56439508 Msa0609080:three_prime_UTR
TCCTGCTTGCTTCTGTCTCT+GGG 0.407727 4_2:+56437055 Msa0609080:three_prime_UTR
GCCTCATCCTGACATGTTCA+CGG 0.408458 4_2:+56433039 Msa0609080:CDS
CTTTAATGCACAGAAATATA+TGG 0.408496 4_2:-56433714 None:intergenic
AGCAAGCAGGATCGTTCTCC+AGG 0.409597 4_2:-56437043 None:intergenic
ATTAAGCAGTAGGGAATGAT+AGG 0.411089 4_2:+56441207 Msa0609080:three_prime_UTR
CTGCTTTAAAGAGTAATACT+TGG 0.411545 4_2:+56438618 Msa0609080:three_prime_UTR
TTGACCAGGATTACAATTGC+AGG 0.412229 4_2:+56436001 Msa0609080:CDS
TTGCACCATCATCATCTCTC+AGG 0.412745 4_2:-56433096 None:intergenic
GGTGCAAAGAGAGTATTCTT+TGG 0.413640 4_2:+56433112 Msa0609080:CDS
TCCTCAAGCAGGATTCTTCA+TGG 0.415001 4_2:-56436777 None:intergenic
GCCTGATGGCGGTCCAGGGA+AGG 0.420258 4_2:+56437990 Msa0609080:three_prime_UTR
GCCTCCACACACTGTTCTTC+CGG 0.422225 4_2:+56428727 Msa0609080:five_prime_UTR
GAGCATTTGGCATGTGATAA+TGG 0.423224 4_2:+56437692 Msa0609080:three_prime_UTR
TAAAACTTATCAGACCAAAA+TGG 0.423352 4_2:+56438854 Msa0609080:three_prime_UTR
TAGTGGTCTATTGTATATCA+TGG 0.423771 4_2:+56438774 Msa0609080:three_prime_UTR
CCGGAGAAACTCAGCATAGA+TGG 0.424071 4_2:+56440777 Msa0609080:three_prime_UTR
CCCTTCCCTGGACCGCCATC+AGG 0.424696 4_2:-56437991 None:intergenic
CGATGATGAAAGGGCCGATT+GGG 0.425112 4_2:+56439666 Msa0609080:three_prime_UTR
AAGCAAATACTGGCACATTT+GGG 0.425241 4_2:+56437147 Msa0609080:three_prime_UTR
CATTTGTGGTATACAGCAAA+AGG 0.427310 4_2:-56432607 None:intergenic
CAAAATAAGCATAGAGATCC+AGG 0.430250 4_2:-56437364 None:intergenic
AACAGTAATCATCTATTGAA+TGG 0.431453 4_2:+56437796 Msa0609080:three_prime_UTR
GAAGCAAGGGATGGTGGAAG+TGG 0.431594 4_2:-56436616 None:intergenic
AAGGGCTAGGAAAGAATGAT+AGG 0.434548 4_2:+56441159 Msa0609080:three_prime_UTR
AAAGAATTCACAGAGAAATC+TGG 0.436321 4_2:-56436850 None:intergenic
ACAGGCTAAGATAAATGCTT+TGG 0.436703 4_2:+56440908 Msa0609080:three_prime_UTR
ATTGTTGATAATTCAGAAGA+TGG 0.436942 4_2:+56438081 Msa0609080:three_prime_UTR
AAAACAATATCCTTTAGAAC+TGG 0.439334 4_2:+56438510 Msa0609080:three_prime_UTR
TCAATATCTGGTGTTCGTCT+TGG 0.440784 4_2:+56437916 Msa0609080:three_prime_UTR
TCTTGAAGGTGCACAAGATA+TGG 0.441667 4_2:+56438348 Msa0609080:three_prime_UTR
TTGTGTATTTCAGATATAAA+CGG 0.443261 4_2:+56429173 Msa0609080:intron
TTCTTCAAGTGCGGAAAACT+GGG 0.444803 4_2:-56438277 None:intergenic
TGAAAGGGCCGATTGGGAAG+TGG 0.445092 4_2:+56439672 Msa0609080:three_prime_UTR
TTCACTTAATGCAGGGCAAA+TGG 0.446047 4_2:-56433350 None:intergenic
AGTTGGAAAATTGGAGATCA+GGG 0.447960 4_2:+56429253 Msa0609080:CDS
CAGGGGAAATGTAGATTTCA+AGG 0.449857 4_2:+56433519 Msa0609080:CDS
CCATCTATGCTGAGTTTCTC+CGG 0.452072 4_2:-56440777 None:intergenic
ATATCTCAAGTTTGCATCCC+GGG 0.452527 4_2:-56439082 None:intergenic
CCTGATGGCGGTCCAGGGAA+GGG 0.452747 4_2:+56437991 Msa0609080:three_prime_UTR
GAACTGACTGATGCAGTTCA+GGG 0.456429 4_2:+56439601 Msa0609080:three_prime_UTR
CGCTGAAGCCCTCCTACATC+GGG 0.456598 4_2:+56437954 Msa0609080:three_prime_UTR
TAGTCCTGCAATTGTAATCC+TGG 0.456932 4_2:-56436005 None:intergenic
CAAATCTGAAATTGATTCCA+TGG 0.458474 4_2:+56439858 Msa0609080:three_prime_UTR
AAGGTTTATTGACGCAATTA+CGG 0.458927 4_2:+56441012 Msa0609080:three_prime_UTR
AAAATTCTCTATAAAACAAC+CGG 0.458978 4_2:+56439702 Msa0609080:three_prime_UTR
GTAATATCAAGTCCACTTCA+AGG 0.461226 4_2:-56439630 None:intergenic
CCCTTGGCAGAAGCACTTGA+AGG 0.461852 4_2:-56430098 None:intergenic
GGAGGAGGAACCTTTAACAA+TGG 0.463801 4_2:-56437266 None:intergenic
GGTACTGGTTAATCGGGTTC+GGG 0.464417 4_2:-56428848 None:intergenic
GGAAGAACAGTGTGTGGAGG+CGG 0.466009 4_2:-56428725 None:intergenic
CGGGTACGGCTTCGCTGATA+AGG 0.467429 4_2:+56430124 Msa0609080:CDS
ATGGAAGGTACTGGTTAATC+GGG 0.467488 4_2:-56428854 None:intergenic
AACAATTCCATCAGCTAAGA+AGG 0.467963 4_2:-56436806 None:intergenic
TTGCTTCCAAAGATAGAGTA+AGG 0.468531 4_2:-56437130 None:intergenic
AACACTCTCCCAGCGTAAAG+TGG 0.469527 4_2:-56437645 None:intergenic
TTCTCTTGTGTCAATTGTTG+TGG 0.469685 4_2:+56433690 Msa0609080:CDS
CCTGCGGGTATTATGAGGGT+TGG 0.473636 4_2:+56437287 Msa0609080:three_prime_UTR
GGCGTCAGAATTCTCTGGGA+TGG 0.476888 4_2:+56437168 Msa0609080:three_prime_UTR
TAGGTTTCCCACTTCCCAAT+CGG 0.477365 4_2:-56439680 None:intergenic
TGCGGGTATTATGAGGGTTG+GGG 0.477394 4_2:+56437289 Msa0609080:three_prime_UTR
ACAGGCCGTGTCTAAACAAC+AGG 0.479776 4_2:-56439461 None:intergenic
GTAAAACTTGTATAAACAAT+GGG 0.481284 4_2:-56439111 None:intergenic
TTTGCTTGAGGAAGTGGTTG+TGG 0.482654 4_2:+56440881 Msa0609080:three_prime_UTR
TCTGCCAAGGGTAGCGGGTA+CGG 0.484561 4_2:+56430110 Msa0609080:CDS
GTGCTTCTGCCAAGGGTAGC+GGG 0.484980 4_2:+56430105 Msa0609080:CDS
AAGACTCAAGAAATCGAAGT+TGG 0.485523 4_2:-56437520 None:intergenic
CTGTAATTTGAACTGATCTC+TGG 0.485808 4_2:-56429034 None:intergenic
TTAAAGGTTCCTCCTCCTGC+GGG 0.485950 4_2:+56437272 Msa0609080:three_prime_UTR
CCAATCGGCCCTTTCATCAT+CGG 0.486081 4_2:-56439665 None:intergenic
AAATAGCCATAGCTTGGAAA+AGG 0.486744 4_2:+56437402 Msa0609080:three_prime_UTR
GATGCATTGCATTCCAGCGT+TGG 0.487230 4_2:+56429197 Msa0609080:CDS
TTCTGTCAGCCAGTCTGTAA+TGG 0.487976 4_2:+56439924 Msa0609080:three_prime_UTR
GTTACCATGTTGCTGCCCCT+TGG 0.489778 4_2:-56431929 None:intergenic
AGGGCGTGGATGCATATTAG+AGG 0.489955 4_2:-56436577 None:intergenic
CAATATGCAACGGTTACAAC+AGG 0.490863 4_2:-56439479 None:intergenic
TGGGATGGACTGCTGGATTG+TGG 0.492721 4_2:+56437183 Msa0609080:three_prime_UTR
GGATGTAACTATAGAGTTGA+AGG 0.494356 4_2:+56438312 Msa0609080:three_prime_UTR
ACACGTGCAGCACGTGGTTG+AGG 0.495036 4_2:-56428696 None:intergenic
TTTACCGTAACCAGTTCTAA+AGG 0.495458 4_2:-56438520 None:intergenic
GTAGCATCCGTGAACATGTC+AGG 0.497161 4_2:-56433046 None:intergenic
ATTAAATGCATACCAAAATC+CGG 0.497248 4_2:-56436251 None:intergenic
ATATCTGGTGTTCGTCTTGG+TGG 0.499981 4_2:+56437919 Msa0609080:three_prime_UTR
TCCTCCTGCGGGTATTATGA+GGG 0.500115 4_2:+56437283 Msa0609080:three_prime_UTR
AGGATAATGCCGATGATGAA+AGG 0.500329 4_2:+56439656 Msa0609080:three_prime_UTR
TAGATGGTAGTGTTAGCAGC+AGG 0.501457 4_2:+56440793 Msa0609080:three_prime_UTR
TCTCTCTTCAGAAATTGGAA+TGG 0.501516 4_2:+56432993 Msa0609080:intron
TGTTGCAGACATTAAGCAGT+AGG 0.501892 4_2:+56441197 Msa0609080:three_prime_UTR
AAGGTGAATCTAAAACGAAA+AGG 0.502023 4_2:-56436998 None:intergenic
GCACTTCTCCGCTTTATGAC+AGG 0.502450 4_2:+56433478 Msa0609080:CDS
TGCTTGCTTTGAAGTAGCTA+TGG 0.503541 4_2:+56437226 Msa0609080:three_prime_UTR
ATATCCTTTAGAACTGGTTA+CGG 0.504057 4_2:+56438516 Msa0609080:three_prime_UTR
ACAATAGACCACTAATACCA+TGG 0.504788 4_2:-56438765 None:intergenic
AATGTCACCACCGCTAAAGT+TGG 0.505134 4_2:+56429236 Msa0609080:CDS
ATTCCTCTAGTTCAGTTTGT+CGG 0.505197 4_2:+56437563 Msa0609080:three_prime_UTR
TAATTGTTCAATAGAAGTGT+TGG 0.505484 4_2:-56437333 None:intergenic
ACGCTGAAGCCCTCCTACAT+CGG 0.506204 4_2:+56437953 Msa0609080:three_prime_UTR
AGCAGGATTCTTCATGGAGA+TGG 0.506551 4_2:-56436771 None:intergenic
TGACCTGGTTCACTTAATGC+AGG 0.508037 4_2:-56433358 None:intergenic
CATTGACAAGAATCTTTCTC+CGG 0.508499 4_2:+56440758 Msa0609080:three_prime_UTR
GTTGGAATACTTGGGCCTGA+TGG 0.508827 4_2:+56437976 Msa0609080:three_prime_UTR
TCCATGGGCCGTATAACAGC+TGG 0.509087 4_2:+56439874 Msa0609080:three_prime_UTR
TAGCAATCTACTGAAGCTGC+TGG 0.510383 4_2:+56433664 Msa0609080:intron
TACATTAGTGCAGCCATCGA+TGG 0.511108 4_2:+56436199 Msa0609080:CDS
ATATCATCCTTCTTAGCTGA+TGG 0.511224 4_2:+56436799 Msa0609080:CDS
ATCAATCCTAGCAAGAGCAT+TGG 0.512689 4_2:+56428978 Msa0609080:CDS
GAAGAACAGTGTGTGGAGGC+GGG 0.513551 4_2:-56428724 None:intergenic
AGCTAGAAGTAGCCCAAAGA+AGG 0.514598 4_2:+56438456 Msa0609080:three_prime_UTR
AGTGCTTCTGCCAAGGGTAG+CGG 0.515579 4_2:+56430104 Msa0609080:CDS
AATTGAATGCAAATTTCTCT+GGG 0.515678 4_2:-56438726 None:intergenic
TGTTAAGTGTTGTATACGTT+AGG 0.517757 4_2:+56441129 Msa0609080:three_prime_UTR
GTGGGAGGAAGATGCGCAAA+AGG 0.518550 4_2:-56439274 None:intergenic
CCGATGATGAAAGGGCCGAT+TGG 0.518635 4_2:+56439665 Msa0609080:three_prime_UTR
AATGCCACTCATAGAACCCT+TGG 0.519030 4_2:+56437602 Msa0609080:three_prime_UTR
ACCTTCAAGTGCTTCTGCCA+AGG 0.519468 4_2:+56430097 Msa0609080:CDS
AGGGATGGTGGAAGTGGAGA+AGG 0.520916 4_2:-56436610 None:intergenic
CGTATACAACACTTAACATA+CGG 0.521126 4_2:-56441124 None:intergenic
ATCTCGTCTTGCCCATGACA+TGG 0.521138 4_2:+56439215 Msa0609080:three_prime_UTR
TGTTCTCCTAGAGGATATAT+TGG 0.521243 4_2:-56436529 None:intergenic
ATACAGCAAAAGGTTGTGTA+TGG 0.521657 4_2:-56432597 None:intergenic
GTGGAGAAGGCATGATCTGA+AGG 0.521964 4_2:-56436597 None:intergenic
GACTGATTTCACTACCTGGT+TGG 0.522534 4_2:-56429968 None:intergenic
TTTGGGCGTCAGAATTCTCT+GGG 0.522821 4_2:+56437164 Msa0609080:three_prime_UTR
CAAGTATTCCAACCCGATGT+AGG 0.523481 4_2:-56437966 None:intergenic
AAGGTGCTGAAGGGAGGACT+CGG 0.523685 4_2:-56440949 None:intergenic
GAGGTGCTGGAACTCATCCT+TGG 0.524196 4_2:-56439824 None:intergenic
TGCTTTAAAGAGTAATACTT+GGG 0.524339 4_2:+56438619 Msa0609080:three_prime_UTR
TGTATTCCAATGCTCTTGCT+AGG 0.526678 4_2:-56428984 None:intergenic
TCCAGCTGTTATACGGCCCA+TGG 0.526903 4_2:-56439875 None:intergenic
ACTGAATTGAACAGTCCACT+TGG 0.528612 4_2:+56433298 Msa0609080:CDS
GAGGAGGAACCTTTAACAAT+GGG 0.529242 4_2:-56437265 None:intergenic
GGAAGTGGTTGTGGATTCAC+AGG 0.529640 4_2:+56440890 Msa0609080:three_prime_UTR
ACTGATGCAGTTCAGGGAAT+CGG 0.530426 4_2:+56439607 Msa0609080:three_prime_UTR
TTGGAAAAGGAAAGAAATGA+AGG 0.530965 4_2:+56437415 Msa0609080:three_prime_UTR
TAGGCTTGATTTGGTTCTTG+AGG 0.533209 4_2:+56429916 Msa0609080:CDS
CATGGTAGTGCTCGTCTCCA+AGG 0.533542 4_2:+56431912 Msa0609080:CDS
TAACAACGTCAAGGTGCTGA+AGG 0.533983 4_2:-56440959 None:intergenic
GTTATCTCCTTCAGAAAGAC+TGG 0.534864 4_2:-56435969 None:intergenic
CCTATAGAAAGACCCTTCCC+TGG 0.535268 4_2:-56438003 None:intergenic
AACCAAACACCCCGAAGCTA+AGG 0.535340 4_2:+56428949 Msa0609080:five_prime_UTR
TGTAGATTTCAAGGCCCAGC+AGG 0.535542 4_2:+56433528 Msa0609080:CDS
CACCAGAAAGTGTCATAGAA+GGG 0.538014 4_2:+56438248 Msa0609080:intron
CTCCTAGAGGATATATTGGC+GGG 0.538397 4_2:-56436525 None:intergenic
GGAAAGAAATGAAGGACGCT+AGG 0.538744 4_2:+56437423 Msa0609080:three_prime_UTR
CATATCTCAAGTTTGCATCC+CGG 0.538890 4_2:-56439083 None:intergenic
ACTTGCAGGTTGTAGTTCAA+GGG 0.539303 4_2:+56439509 Msa0609080:three_prime_UTR
ATCAACAATAACTTTGCTTG+AGG 0.539525 4_2:+56440869 Msa0609080:three_prime_UTR
TCCCAGAGACAGAAGCAAGC+AGG 0.539943 4_2:-56437056 None:intergenic
TAGGTAGAGAACAGAGGTGT+TGG 0.540800 4_2:+56438404 Msa0609080:three_prime_UTR
TCATGATTTGCAGGGAGTGA+AGG 0.542074 4_2:+56440735 Msa0609080:intron
ATGGTAGTGCTCGTCTCCAA+GGG 0.542350 4_2:+56431913 Msa0609080:CDS
TTGTTAATGCTATGGATCGT+TGG 0.542448 4_2:+56438920 Msa0609080:three_prime_UTR
AGAAAACAGCTGTCAGTTGA+GGG 0.543095 4_2:-56437765 None:intergenic
TCTGGTGTTCGTCTTGGTGG+TGG 0.543757 4_2:+56437922 Msa0609080:three_prime_UTR
CACATTGTGATCCAATTCAT+CGG 0.543939 4_2:+56428893 Msa0609080:five_prime_UTR
AAATCTTATTTGCTGGAGCA+AGG 0.544725 4_2:+56436961 Msa0609080:CDS
ATGTTCACGGATGCTACTTC+AGG 0.544806 4_2:+56433052 Msa0609080:CDS
CTCATAATACCCGCAGGAGG+AGG 0.544819 4_2:-56437281 None:intergenic
GTGTATGGTTATAGACGCCA+TGG 0.545498 4_2:-56432582 None:intergenic
AGTGCGAAAATGGAAGGTAC+TGG 0.546246 4_2:-56428863 None:intergenic
CACAAGATATGGCCAAAAGA+TGG 0.547727 4_2:+56438359 Msa0609080:three_prime_UTR
AAACTTACAGCAGCGTCACT+AGG 0.547758 4_2:-56437482 None:intergenic
TCAGGGAATCGGCCTTGAAG+TGG 0.548629 4_2:+56439618 Msa0609080:three_prime_UTR
GAAAGGGCCGATTGGGAAGT+GGG 0.548857 4_2:+56439673 Msa0609080:three_prime_UTR
AGTAAAACTTGTATAAACAA+TGG 0.549418 4_2:-56439112 None:intergenic
GTTAGGCAGAAATAAGGGCT+AGG 0.550321 4_2:+56441146 Msa0609080:three_prime_UTR
TGTAAATCTTAAGGAGGCGC+GGG 0.550379 4_2:+56432722 Msa0609080:CDS
TATTTGCTTACAGTTATCCA+TGG 0.550752 4_2:+56438748 Msa0609080:three_prime_UTR
TTGATTCCATAGATTTGTGT+GGG 0.551662 4_2:-56440851 None:intergenic
GTTGATTCCATAGATTTGTG+TGG 0.552142 4_2:-56440852 None:intergenic
CAATAACTGTTTGAGAAGCA+AGG 0.552486 4_2:-56436630 None:intergenic
CCTTCAAGTGCTTCTGCCAA+GGG 0.552594 4_2:+56430098 Msa0609080:CDS
AACTCCATTAGTGGTTAACA+TGG 0.552716 4_2:-56439575 None:intergenic
TGCCCTGCATTAAGTGAACC+AGG 0.553363 4_2:+56433355 Msa0609080:CDS
GTCTCCAAGGGGCAGCAACA+TGG 0.553455 4_2:+56431925 Msa0609080:CDS
GAAGGATGATATCCTCAAGC+AGG 0.554162 4_2:-56436788 None:intergenic
GCCACTCATAGAACCCTTGG+TGG 0.554557 4_2:+56437605 Msa0609080:three_prime_UTR
GCAAAGAGAGTATTCTTTGG+AGG 0.556571 4_2:+56433115 Msa0609080:CDS
CAGAAAACAGCTGTCAGTTG+AGG 0.557632 4_2:-56437766 None:intergenic
TATACGTTAGGCAGAAATAA+GGG 0.558150 4_2:+56441141 Msa0609080:three_prime_UTR
AACACCCCGAAGCTAAGGTA+TGG 0.560313 4_2:+56428954 Msa0609080:exon
GGCAACCTTCAGATTGCAGA+TGG 0.561338 4_2:+56431846 Msa0609080:intron
GTTAAAGGTTCCTCCTCCTG+CGG 0.561569 4_2:+56437271 Msa0609080:three_prime_UTR
TAATTGTAGGGCACCACCCA+TGG 0.561905 4_2:+56432565 Msa0609080:intron
GGATAATGCCGATGATGAAA+GGG 0.562423 4_2:+56439657 Msa0609080:three_prime_UTR
GATAGACTGCGTGGATTCTG+AGG 0.563446 4_2:+56437670 Msa0609080:three_prime_UTR
AATCTATTACTTGAAACTCA+TGG 0.564390 4_2:+56431894 Msa0609080:CDS
TGCAGGCGGCAATCCAACGC+TGG 0.564425 4_2:-56429210 None:intergenic
TGGGTTTATTGGATGACACT+AGG 0.564558 4_2:+56438638 Msa0609080:three_prime_UTR
GAAGCCGTACCCGCTACCCT+TGG 0.565585 4_2:-56430114 None:intergenic
TTGATGCCAGCCAGAAGAAG+TGG 0.565594 4_2:+56437090 Msa0609080:three_prime_UTR
ACAGCAGTGGCAATTGATTG+TGG 0.565902 4_2:+56436549 Msa0609080:CDS
TTCGCGGCAAAATCACGTGC+CGG 0.568743 4_2:-56428746 None:intergenic
TCCAATTGGGCCTTATCCAA+AGG 0.569201 4_2:-56436907 None:intergenic
ACTTCCATATTCCCATGTCA+TGG 0.570341 4_2:-56439227 None:intergenic
CTAGCTGATCCATTACAGAC+TGG 0.570572 4_2:-56439933 None:intergenic
CTCTGGGAAATACAAACTGA+TGG 0.570741 4_2:-56438710 None:intergenic
GAACAGTCCACTTGGGCTCG+AGG 0.570828 4_2:+56433306 Msa0609080:CDS
ATTCTCAAGAATGTCATTCG+TGG 0.571326 4_2:-56439348 None:intergenic
AGGGAAAACAGAGGGGTGTG+TGG 0.571568 4_2:-56428780 None:intergenic
GGCAGAAGCACTTGAAGGTG+TGG 0.571854 4_2:-56430093 None:intergenic
CAACATATTGAGTCAATGCA+AGG 0.571945 4_2:+56440993 Msa0609080:three_prime_UTR
TTCTCAAGAATGTCATTCGT+GGG 0.571961 4_2:-56439347 None:intergenic
AAGGCATGATCTGAAGGGCG+TGG 0.572348 4_2:-56436591 None:intergenic
AACTGAACCTCGAGCCCAAG+TGG 0.574792 4_2:-56433313 None:intergenic
AGTGGTCTATTGTATATCAT+GGG 0.574978 4_2:+56438775 Msa0609080:three_prime_UTR
AATAACTGTTTGAGAAGCAA+GGG 0.575108 4_2:-56436629 None:intergenic
TTTAAAATTTAAATGGTGGG+AGG 0.575269 4_2:-56439289 None:intergenic
GTCTGTACATTGCTCACTGA+CGG 0.575692 4_2:-56429869 None:intergenic
TTGTATCATCCACTTTACGC+TGG 0.576356 4_2:+56437636 Msa0609080:three_prime_UTR
TGTATCATCCACTTTACGCT+GGG 0.576478 4_2:+56437637 Msa0609080:three_prime_UTR
GCGGTGGTGACATTGAGTGC+AGG 0.577931 4_2:-56429227 None:intergenic
AATGAAACAGGGAAAACAGA+GGG 0.578002 4_2:-56428788 None:intergenic
GTTGCAGACATTAAGCAGTA+GGG 0.580638 4_2:+56441198 Msa0609080:three_prime_UTR
TCCGTGAACATGTCAGGATG+AGG 0.580767 4_2:-56433040 None:intergenic
GGGAAAACAGAGGGGTGTGT+GGG 0.581368 4_2:-56428779 None:intergenic
GTATTCCAACCCGATGTAGG+AGG 0.581781 4_2:-56437963 None:intergenic
ACTGCATTAAAAGCTCAAGC+TGG 0.582233 4_2:-56434709 None:intergenic
GATGGCTGCACTAATGTACA+TGG 0.585055 4_2:-56436194 None:intergenic
CTTCCATATTCCCATGTCAT+GGG 0.586357 4_2:-56439226 None:intergenic
TTCCAAAGATAGAGTAAGGT+GGG 0.586466 4_2:-56437126 None:intergenic
GTTTGAGAAGCAAGGGATGG+TGG 0.587574 4_2:-56436622 None:intergenic
ATGGATCAGCTAGGAAACAT+TGG 0.588507 4_2:+56439943 Msa0609080:three_prime_UTR
TGCCCGCCAATATATCCTCT+AGG 0.588617 4_2:+56436523 Msa0609080:CDS
TAACTATAGAGTTGAAGGAC+TGG 0.589079 4_2:+56438317 Msa0609080:three_prime_UTR
GAAGCCCTCCTACATCGGGT+TGG 0.589150 4_2:+56437958 Msa0609080:three_prime_UTR
TACCACAAATGAAAGCTGGC+AGG 0.589503 4_2:+56432619 Msa0609080:CDS
TTGGGCCTGATGGCGGTCCA+GGG 0.589522 4_2:+56437986 Msa0609080:three_prime_UTR
TCTTCTTCTGTGAATATGGA+GGG 0.590037 4_2:+56437539 Msa0609080:three_prime_UTR
CATATATTCCTGTCATAAAG+CGG 0.591151 4_2:-56433486 None:intergenic
AAAATTAAAACAGTAAAACA+TGG 0.591331 4_2:-56439177 None:intergenic
TGTATACCACAAATGAAAGC+TGG 0.592052 4_2:+56432615 Msa0609080:CDS
GATGGTAGTGTTAGCAGCAG+GGG 0.592258 4_2:+56440795 Msa0609080:three_prime_UTR
AAATCTGAAATTGATTCCAT+GGG 0.593326 4_2:+56439859 Msa0609080:three_prime_UTR
GAAACCAAGAATACTAAACC+TGG 0.594647 4_2:+56437025 Msa0609080:three_prime_UTR
AGATGGTGGTTCTCTAGTCA+AGG 0.594807 4_2:+56438376 Msa0609080:three_prime_UTR
TTGTCTGGCTTCTTCAAGTG+CGG 0.595047 4_2:-56438286 None:intergenic
GGAATACTTGGGCCTGATGG+CGG 0.596008 4_2:+56437979 Msa0609080:three_prime_UTR
TCTCCTAGAGGATATATTGG+CGG 0.596532 4_2:-56436526 None:intergenic
AAATTATGATTACAGGTTTG+GGG 0.596683 4_2:+56441268 Msa0609080:three_prime_UTR
GTCTTCTTCTGTGAATATGG+AGG 0.597518 4_2:+56437538 Msa0609080:three_prime_UTR
TTCTCTAGTCAAGGAGACAT+AGG 0.598172 4_2:+56438385 Msa0609080:three_prime_UTR
TACATCGGGTTGGAATACTT+GGG 0.600707 4_2:+56437968 Msa0609080:three_prime_UTR
AGCAATCTACTGAAGCTGCT+GGG 0.601218 4_2:+56433665 Msa0609080:intron
TCTCGTCTTGCCCATGACAT+GGG 0.601594 4_2:+56439216 Msa0609080:three_prime_UTR
AAAGAAGGTTACAGGTGGCA+AGG 0.604978 4_2:+56438471 Msa0609080:three_prime_UTR
CTGAATTGAACAGTCCACTT+GGG 0.606995 4_2:+56433299 Msa0609080:CDS
GACCTGGTTCACTTAATGCA+GGG 0.607166 4_2:-56433357 None:intergenic
TTGTAAATCTTAAGGAGGCG+CGG 0.607394 4_2:+56432721 Msa0609080:CDS
TCTCCGACAAACTGAACTAG+AGG 0.609081 4_2:-56437566 None:intergenic
TCAGGTTGTAAATCTTAAGG+AGG 0.609697 4_2:+56432716 Msa0609080:intron
ACTTCAGGCAGCTCTCAAGT+AGG 0.610380 4_2:+56433067 Msa0609080:CDS
GATTCCATACCTTAGCTTCG+GGG 0.614173 4_2:-56428958 None:intergenic
CTTCCAAAGATAGAGTAAGG+TGG 0.614602 4_2:-56437127 None:intergenic
TAAGTTGTTTAACAACGTCA+AGG 0.615150 4_2:-56440968 None:intergenic
AATGAAAGTGCGAAAATGGA+AGG 0.615406 4_2:-56428869 None:intergenic
TATCCAATATCACTCATTGA+AGG 0.618222 4_2:-56437742 None:intergenic
TACCTGGTTGGAGTCTCAGG+TGG 0.619310 4_2:-56429956 None:intergenic
AGATGGTAGTGTTAGCAGCA+GGG 0.620391 4_2:+56440794 Msa0609080:three_prime_UTR
ACAACTGCTATGTTGAAACA+TGG 0.622714 4_2:+56438977 Msa0609080:three_prime_UTR
TATTCCAACCCGATGTAGGA+GGG 0.623889 4_2:-56437962 None:intergenic
AATATATGTTTGTCTAAACA+GGG 0.625821 4_2:+56433501 Msa0609080:CDS
ATGCAGGCCAGTCTTTCTGA+AGG 0.629188 4_2:+56435962 Msa0609080:intron
GTAGCTATGGTAACTGCTGA+CGG 0.629192 4_2:+56437239 Msa0609080:three_prime_UTR
TCCATGAAGAATCCTGCTTG+AGG 0.629510 4_2:+56436776 Msa0609080:CDS
ACGAACACCAGATATTGAAG+CGG 0.631105 4_2:-56437911 None:intergenic
GAGGCGATATGAAACCTGCT+GGG 0.631226 4_2:-56433542 None:intergenic
TACTTAATTCCAGTTACAGG+AGG 0.634777 4_2:-56441054 None:intergenic
TGTGTGACAGATTCCATCGA+TGG 0.634859 4_2:-56436212 None:intergenic
GTGGTGACATTGAGTGCAGG+CGG 0.636181 4_2:-56429224 None:intergenic
CGATGAATTGGATCACAATG+TGG 0.636500 4_2:-56428892 None:intergenic
ACCACCAAGGGTTCTATGAG+TGG 0.637353 4_2:-56437606 None:intergenic
TGGAGAAGGCATGATCTGAA+GGG 0.639379 4_2:-56436596 None:intergenic
TACAACAATAGCACCACCAA+GGG 0.641386 4_2:-56437618 None:intergenic
ATAACGACAGTAACTTGACC+AGG 0.643154 4_2:+56435987 Msa0609080:CDS
ACCTAAATTAGAAAGCTGAA+CGG 0.643579 4_2:-56429064 None:intergenic
CACCACCTGAGACTCCAACC+AGG 0.644681 4_2:+56429954 Msa0609080:CDS
TGCCACTGCTGTTCTCCTAG+AGG 0.645235 4_2:-56436538 None:intergenic
AACGTCAAGGTGCTGAAGGG+AGG 0.645581 4_2:-56440955 None:intergenic
GAACAGTGTGTGGAGGCGGG+AGG 0.647989 4_2:-56428721 None:intergenic
AACAACGTCAAGGTGCTGAA+GGG 0.650115 4_2:-56440958 None:intergenic
AGTGGACTTGATATTACATG+AGG 0.650204 4_2:+56439636 Msa0609080:three_prime_UTR
CAGTCTGTAATGGATCAGCT+AGG 0.650425 4_2:+56439934 Msa0609080:three_prime_UTR
TGATGCCAGCCAGAAGAAGT+GGG 0.651757 4_2:+56437091 Msa0609080:three_prime_UTR
ATCCTCTAGGAGAACAGCAG+TGG 0.651784 4_2:+56436536 Msa0609080:CDS
TCTCACCTGTTGTTTAGACA+CGG 0.652014 4_2:+56439456 Msa0609080:three_prime_UTR
GCCGGAAGAACAGTGTGTGG+AGG 0.652371 4_2:-56428728 None:intergenic
CCAACCCTCATAATACCCGC+AGG 0.653331 4_2:-56437287 None:intergenic
AAGATATGGCCAAAAGATGG+TGG 0.653393 4_2:+56438362 Msa0609080:three_prime_UTR
AGAGATCAGTTCAAATTACA+GGG 0.655150 4_2:+56429036 Msa0609080:CDS
CGTGCCGGAAGAACAGTGTG+TGG 0.656478 4_2:-56428731 None:intergenic
GAGGAGACACGTGCAGCACG+TGG 0.658961 4_2:-56428702 None:intergenic
GTAACCGTTGCATATTGAGA+TGG 0.659239 4_2:+56439485 Msa0609080:three_prime_UTR
GCTAGGAATACATCTTTCAG+TGG 0.662424 4_2:+56437440 Msa0609080:three_prime_UTR
AAATTAAAACAGTAAAACAT+GGG 0.665371 4_2:-56439176 None:intergenic
GGCTGCACTAATGTACATGG+AGG 0.666317 4_2:-56436191 None:intergenic
AGCCCAAAGAAGGTTACAGG+TGG 0.668312 4_2:+56438466 Msa0609080:three_prime_UTR
TATCTCAAGTTTGCATCCCG+GGG 0.669369 4_2:-56439081 None:intergenic
ACTGTTTGAGAAGCAAGGGA+TGG 0.672035 4_2:-56436625 None:intergenic
CTTGAAGAAGCCAGACAATG+TGG 0.672275 4_2:+56438291 Msa0609080:three_prime_UTR
AGTACCATCTCAATATGCAA+CGG 0.675517 4_2:-56439489 None:intergenic
GAGTGTTGAGATAGACTGCG+TGG 0.680477 4_2:+56437661 Msa0609080:three_prime_UTR
ACCCTCATAATACCCGCAGG+AGG 0.681540 4_2:-56437284 None:intergenic
TCAAACCTGAGAGATGATGA+TGG 0.691259 4_2:+56433091 Msa0609080:CDS
GAGACATAGGTAGAGAACAG+AGG 0.692208 4_2:+56438398 Msa0609080:three_prime_UTR
GCTGCACTAATGTACATGGA+GGG 0.692488 4_2:-56436190 None:intergenic
AAATGAAACAGGGAAAACAG+AGG 0.693027 4_2:-56428789 None:intergenic
GATTGAGGCTGTTGTAACCA+AGG 0.697221 4_2:+56439807 Msa0609080:intron
TGGTAGTGCTCGTCTCCAAG+GGG 0.702031 4_2:+56431914 Msa0609080:CDS
ATGGTTATAGACGCCATGGG+TGG 0.704669 4_2:-56432578 None:intergenic
GATGGAATTGTTGTCAATCG+TGG 0.711660 4_2:+56436817 Msa0609080:CDS
ATATATGTTTGTCTAAACAG+GGG 0.712376 4_2:+56433502 Msa0609080:CDS
ATACAACAATAGCACCACCA+AGG 0.717745 4_2:-56437619 None:intergenic
ATGAAACAGGGAAAACAGAG+GGG 0.727995 4_2:-56428787 None:intergenic
TGTATGGTTATAGACGCCAT+GGG 0.732357 4_2:-56432581 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTATAAAAATTATTT+TGG - chr4_2:56431661-56431680 None:intergenic 0.0%
!!! AAAATAATTTTTATAATTTA+TGG + chr4_2:56431660-56431679 Msa0609080:intron 0.0%
!! TAAAATTTAACAAATGAAAT+AGG + chr4_2:56430224-56430243 Msa0609080:intron 10.0%
!! AAAATTTAACAAATGAAATA+GGG + chr4_2:56430225-56430244 Msa0609080:intron 10.0%
!!! TTTTTATCTTCTTAATAATT+TGG - chr4_2:56431143-56431162 None:intergenic 10.0%
!!! TATTTTTTTAAAACAAATTG+GGG - chr4_2:56432412-56432431 None:intergenic 10.0%
!!! CATATTTTTTTAAAACAAAT+TGG - chr4_2:56432414-56432433 None:intergenic 10.0%
!!! AAAAAGTTCAAATTATTTTT+GGG - chr4_2:56432974-56432993 None:intergenic 10.0%
!! TAATGATATAAATTTATTTG+TGG + chr4_2:56434449-56434468 Msa0609080:intron 10.0%
!! AATGATATAAATTTATTTGT+GGG + chr4_2:56434450-56434469 Msa0609080:intron 10.0%
!!! GATACTTTTTAAAATTTAAA+TGG - chr4_2:56439299-56439318 None:intergenic 10.0%
!! TTCTTACATGAAAAATAAAA+AGG - chr4_2:56428668-56428687 None:intergenic 15.0%
!!! TTGTTTTATTGAAGATTTTA+TGG + chr4_2:56429809-56429828 Msa0609080:intron 15.0%
!! AAATTTAACAAATGAAATAG+GGG + chr4_2:56430226-56430245 Msa0609080:intron 15.0%
!! TAACATGAAAATAAAAATGT+AGG + chr4_2:56430395-56430414 Msa0609080:intron 15.0%
!! TAAGAATAAGAAATAAAAGT+TGG - chr4_2:56430663-56430682 None:intergenic 15.0%
!! ATTTAAATTTCTGTATCAAT+AGG - chr4_2:56431798-56431817 None:intergenic 15.0%
!! ATACTAATACAGAAATAAAA+GGG - chr4_2:56432245-56432264 None:intergenic 15.0%
!!! ATTTTTTTAAAACAAATTGG+GGG - chr4_2:56432411-56432430 None:intergenic 15.0%
!!! GTTTTAAAAAAATATGTTGT+TGG + chr4_2:56432418-56432437 Msa0609080:intron 15.0%
!! AAACAAGAAAATAAAATGAA+AGG - chr4_2:56432797-56432816 None:intergenic 15.0%
!!! AAAAGTTCAAATTATTTTTG+GGG - chr4_2:56432973-56432992 None:intergenic 15.0%
!!! GAAAAAGTTCAAATTATTTT+TGG - chr4_2:56432975-56432994 None:intergenic 15.0%
!! ATAAAATTATAGACAAAAAC+AGG - chr4_2:56433219-56433238 None:intergenic 15.0%
!! ATTGATATTTAAATCAGTTA+AGG - chr4_2:56433758-56433777 None:intergenic 15.0%
!!! ATTCTGATTCTTTTAAATAA+GGG - chr4_2:56433911-56433930 None:intergenic 15.0%
!! TTATATCATTACATTTAAGT+GGG - chr4_2:56434440-56434459 None:intergenic 15.0%
!! TTTATATCATTACATTTAAG+TGG - chr4_2:56434441-56434460 None:intergenic 15.0%
!! AATTTGATATTAGATTGATA+TGG + chr4_2:56434878-56434897 Msa0609080:intron 15.0%
!! AAAAAATGTCATCAAATAAT+TGG - chr4_2:56436739-56436758 None:intergenic 15.0%
!!! ATGACATTTTTTTATTTTAC+AGG + chr4_2:56436747-56436766 Msa0609080:intron 15.0%
!!! AAAGTGTTTAAAAACTATTT+TGG + chr4_2:56438683-56438702 Msa0609080:three_prime_UTR 15.0%
!! AATTTGCAAATTAGATTATT+AGG - chr4_2:56438802-56438821 None:intergenic 15.0%
!! ATTTGAATGATAAAATTCAT+AGG - chr4_2:56438829-56438848 None:intergenic 15.0%
!! AAATTAAAACAGTAAAACAT+GGG - chr4_2:56439179-56439198 None:intergenic 15.0%
!! AAAATTAAAACAGTAAAACA+TGG - chr4_2:56439180-56439199 None:intergenic 15.0%
!!! CTTTTTAAAATTTAAATGGT+GGG - chr4_2:56439295-56439314 None:intergenic 15.0%
!!! ACTTTTTAAAATTTAAATGG+TGG - chr4_2:56439296-56439315 None:intergenic 15.0%
!! ATACATGATAAAAAAAAGTA+AGG - chr4_2:56440016-56440035 None:intergenic 15.0%
!! CTAAATAAAGTTATAAAACT+TGG + chr4_2:56440470-56440489 Msa0609080:intron 15.0%
!! TTGTGTATTTCAGATATAAA+CGG + chr4_2:56429173-56429192 Msa0609080:intron 20.0%
!! GTAAAATGTGTAAAAAGTTA+CGG + chr4_2:56429322-56429341 Msa0609080:intron 20.0%
!!! ATTTGAAAAGTTGATATATG+TGG + chr4_2:56429427-56429446 Msa0609080:intron 20.0%
!!! CTCTTTCTATGTTTATTTTA+CGG + chr4_2:56429586-56429605 Msa0609080:intron 20.0%
!! TTCATATTCTGATAACTATA+TGG + chr4_2:56430192-56430211 Msa0609080:intron 20.0%
!!! AATAAGAAATAAAAGTTGGT+GGG - chr4_2:56430659-56430678 None:intergenic 20.0%
!! AATATTAAGAGTGAAAAACT+TGG + chr4_2:56431001-56431020 Msa0609080:intron 20.0%
!! TCTAATAACAGATATAGAAT+AGG - chr4_2:56431454-56431473 None:intergenic 20.0%
!! CATACTAATACAGAAATAAA+AGG - chr4_2:56432246-56432265 None:intergenic 20.0%
!! CCTTATATATCAATTCAATA+TGG - chr4_2:56433412-56433431 None:intergenic 20.0%
!! CCATATTGAATTGATATATA+AGG + chr4_2:56433409-56433428 Msa0609080:intron 20.0%
!! AATATATGTTTGTCTAAACA+GGG + chr4_2:56433501-56433520 Msa0609080:CDS 20.0%
!!! AATTTTTCACAAGTTTGTTA+AGG + chr4_2:56433581-56433600 Msa0609080:intron 20.0%
!!! GATTCTGATTCTTTTAAATA+AGG - chr4_2:56433912-56433931 None:intergenic 20.0%
!! AGAATCCTAAGAAATAAAAA+AGG + chr4_2:56433926-56433945 Msa0609080:intron 20.0%
!! GAATCCTAAGAAATAAAAAA+GGG + chr4_2:56433927-56433946 Msa0609080:intron 20.0%
!! AAAATCCTAGAATTAATGTA+AGG - chr4_2:56433987-56434006 None:intergenic 20.0%
!! AAAATGATCTTACAATCATT+TGG + chr4_2:56434669-56434688 Msa0609080:intron 20.0%
!! TAAAACCTATAATTTCAACA+AGG - chr4_2:56434820-56434839 None:intergenic 20.0%
!!! TGAAATTATAGGTTTTAGAT+AGG + chr4_2:56434823-56434842 Msa0609080:intron 20.0%
!! TCCTTTGTTAATTTATGATA+TGG + chr4_2:56435772-56435791 Msa0609080:intron 20.0%
!! CCTTTGTTAATTTATGATAT+GGG + chr4_2:56435773-56435792 Msa0609080:intron 20.0%
!! ATCATTGAAGAGATAATAAA+AGG - chr4_2:56435855-56435874 None:intergenic 20.0%
!!! ATTTTGGTATGCATTTAATT+CGG + chr4_2:56436255-56436274 Msa0609080:intron 20.0%
!!! TGTAAAAGTTTTACATACAT+TGG + chr4_2:56436399-56436418 Msa0609080:intron 20.0%
!! TTTCTTGTTAAGAATATGTT+TGG + chr4_2:56436456-56436475 Msa0609080:intron 20.0%
!! GAAAAATTAAATAGATGTAC+TGG - chr4_2:56436712-56436731 None:intergenic 20.0%
!! TCTGAATTATCAACAATTAT+AGG - chr4_2:56438078-56438097 None:intergenic 20.0%
!!! AGTTTTTAAACACTTTGATA+TGG - chr4_2:56438679-56438698 None:intergenic 20.0%
!!! AAAATATCAAAGTTCTAAAC+AGG - chr4_2:56439040-56439059 None:intergenic 20.0%
!! GTAAAACTTGTATAAACAAT+GGG - chr4_2:56439114-56439133 None:intergenic 20.0%
!! AGTAAAACTTGTATAAACAA+TGG - chr4_2:56439115-56439134 None:intergenic 20.0%
!!! GTTGTTTTATAGAGAATTTT+AGG - chr4_2:56439702-56439721 None:intergenic 20.0%
!! AAAATTCTCTATAAAACAAC+CGG + chr4_2:56439702-56439721 Msa0609080:three_prime_UTR 20.0%
!!! ATTATGAGTTACTTTGTTTT+AGG + chr4_2:56440602-56440621 Msa0609080:intron 20.0%
!!! TTATGAGTTACTTTGTTTTA+GGG + chr4_2:56440603-56440622 Msa0609080:intron 20.0%
!! AATAACTCATAATATCCTTT+AGG - chr4_2:56440684-56440703 None:intergenic 20.0%
!! AAATGTTCACAAAAAAATGA+GGG - chr4_2:56440711-56440730 None:intergenic 20.0%
!! TAAATGTTCACAAAAAAATG+AGG - chr4_2:56440712-56440731 None:intergenic 20.0%
!!! ATTTATTATCATGATTTGCA+GGG + chr4_2:56440727-56440746 Msa0609080:intron 20.0%
!! AAAATTATGATTACAGGTTT+GGG + chr4_2:56441267-56441286 Msa0609080:three_prime_UTR 20.0%
! TGTGATGAAAAAATGAAACA+GGG - chr4_2:56428802-56428821 None:intergenic 25.0%
! TTGTGATGAAAAAATGAAAC+AGG - chr4_2:56428803-56428822 None:intergenic 25.0%
! TCCTTCAATGTTCATAATTA+CGG + chr4_2:56429101-56429120 Msa0609080:intron 25.0%
!!! TGTTTTTGGACTTTTGAATT+TGG + chr4_2:56429146-56429165 Msa0609080:intron 25.0%
! GAGTGAAATATAAGCAAAAA+TGG + chr4_2:56429403-56429422 Msa0609080:intron 25.0%
!! GGTATAAAATACTCTTTTTC+TGG + chr4_2:56429448-56429467 Msa0609080:intron 25.0%
! CTCAACTTTCTCTTATAAAT+AGG - chr4_2:56429475-56429494 None:intergenic 25.0%
! CCTATTTATAAGAGAAAGTT+GGG - chr4_2:56429472-56429491 None:intergenic 25.0%
! TCCTATTTATAAGAGAAAGT+TGG - chr4_2:56429471-56429490 None:intergenic 25.0%
! TTATAAATAAATACTCCCTC+CGG - chr4_2:56429543-56429562 None:intergenic 25.0%
! CGTAAAATAAACATAGAAAG+AGG - chr4_2:56429588-56429607 None:intergenic 25.0%
! CTAACAAGAAAATATAAAGG+TGG - chr4_2:56429772-56429791 None:intergenic 25.0%
!! CACCTTTATATTTTCTTGTT+AGG + chr4_2:56429770-56429789 Msa0609080:intron 25.0%
! TGCCTAACAAGAAAATATAA+AGG - chr4_2:56429775-56429794 None:intergenic 25.0%
! TGTCACATACACATTAATTT+AGG - chr4_2:56430172-56430191 None:intergenic 25.0%
! ATATTCTGATAACTATATGG+TGG + chr4_2:56430195-56430214 Msa0609080:intron 25.0%
! TCTTTGTGATACAGTTTATT+GGG + chr4_2:56430266-56430285 Msa0609080:intron 25.0%
! TTATTCACTTCATGCTATTA+TGG + chr4_2:56430301-56430320 Msa0609080:intron 25.0%
! TATTCACTTCATGCTATTAT+GGG + chr4_2:56430302-56430321 Msa0609080:intron 25.0%
!! AACTTTAAGAAAAGGAAAAG+AGG - chr4_2:56430345-56430364 None:intergenic 25.0%
! AAAATTGTCCTGAAAATAAC+TGG - chr4_2:56430372-56430391 None:intergenic 25.0%
! ATCTAACATCTACTATAGAT+AGG + chr4_2:56430432-56430451 Msa0609080:intron 25.0%
!!! ATAAGAAATAAAAGTTGGTG+GGG - chr4_2:56430658-56430677 None:intergenic 25.0%
! GAATAAGAAATAAAAGTTGG+TGG - chr4_2:56430660-56430679 None:intergenic 25.0%
!!! ATTTGGGTTTTGATAATTGT+TGG + chr4_2:56430868-56430887 Msa0609080:intron 25.0%
!!! TTTGGGTTTTGATAATTGTT+GGG + chr4_2:56430869-56430888 Msa0609080:intron 25.0%
!!! TTTGATAATTGTTGGGATTT+TGG + chr4_2:56430876-56430895 Msa0609080:intron 25.0%
!! TTAGTCATTGATTAGTGAAA+TGG - chr4_2:56430957-56430976 None:intergenic 25.0%
!! AGGGAAAAAATCATGAATTT+TGG + chr4_2:56431071-56431090 Msa0609080:intron 25.0%
! AATCTATTACTTGAAACTCA+TGG + chr4_2:56431894-56431913 Msa0609080:CDS 25.0%
!! TATTTCTGTATTAGTATGTG+AGG + chr4_2:56432047-56432066 Msa0609080:intron 25.0%
! ATTTCTGTATTAGTATGTGA+GGG + chr4_2:56432048-56432067 Msa0609080:intron 25.0%
! AAAAAATATGTTGTTGGAGT+TGG + chr4_2:56432424-56432443 Msa0609080:intron 25.0%
! ATGTTTACAAATAGATCTCA+GGG - chr4_2:56432529-56432548 None:intergenic 25.0%
! GGTATAATTCTTAATACTTC+TGG + chr4_2:56432667-56432686 Msa0609080:intron 25.0%
! GATTTACAACCTGAAAAAAA+GGG - chr4_2:56432710-56432729 None:intergenic 25.0%
! AGATTTACAACCTGAAAAAA+AGG - chr4_2:56432711-56432730 None:intergenic 25.0%
!!! TTTTCAGGTTGTAAATCTTA+AGG + chr4_2:56432713-56432732 Msa0609080:intron 25.0%
! CAAGAAAATAAAATGAAAGG+TGG - chr4_2:56432794-56432813 None:intergenic 25.0%
! AAAGGTCATATTATGATGAA+AGG - chr4_2:56432882-56432901 None:intergenic 25.0%
! AAAGTAAACATTCTGATGAA+AGG - chr4_2:56432900-56432919 None:intergenic 25.0%
! GATATTATACAACTAGTTGA+AGG - chr4_2:56433197-56433216 None:intergenic 25.0%
! CAGTGATCTGATAAATATAA+AGG - chr4_2:56433270-56433289 None:intergenic 25.0%
! GAATATATGTTTGTCTAAAC+AGG + chr4_2:56433500-56433519 Msa0609080:CDS 25.0%
! ATATATGTTTGTCTAAACAG+GGG + chr4_2:56433502-56433521 Msa0609080:CDS 25.0%
! CAAACTTGTGAAAAATTGTT+AGG - chr4_2:56433578-56433597 None:intergenic 25.0%
! CTTTAATGCACAGAAATATA+TGG - chr4_2:56433717-56433736 None:intergenic 25.0%
! TTAAATAGAACAAGAAACAG+AGG + chr4_2:56433876-56433895 Msa0609080:intron 25.0%
! TAAATAGAACAAGAAACAGA+GGG + chr4_2:56433877-56433896 Msa0609080:intron 25.0%
!!! CTTTCCCTTTTTTATTTCTT+AGG - chr4_2:56433934-56433953 None:intergenic 25.0%
! AAAGATAAACCTCATGATTA+AGG + chr4_2:56433950-56433969 Msa0609080:intron 25.0%
! CTAATCCTTACATTAATTCT+AGG + chr4_2:56433979-56433998 Msa0609080:intron 25.0%
! TCTATGGGTGTAAATAAATT+AGG - chr4_2:56434015-56434034 None:intergenic 25.0%
! TTAAGAATGCTTGAATCTAT+GGG - chr4_2:56434030-56434049 None:intergenic 25.0%
! ATTAAGAATGCTTGAATCTA+TGG - chr4_2:56434031-56434050 None:intergenic 25.0%
! ATTGTAGATGTTCTAATCAA+GGG - chr4_2:56434131-56434150 None:intergenic 25.0%
! ACCTCAAAAAGATACTAAAT+GGG - chr4_2:56434477-56434496 None:intergenic 25.0%
!!! CACATAGGACTTTATTTTAA+TGG - chr4_2:56434635-56434654 None:intergenic 25.0%
! CAAAAAATAAAATGAGTGCA+TGG - chr4_2:56434790-56434809 None:intergenic 25.0%
!!! CATGCACTCATTTTATTTTT+TGG + chr4_2:56434788-56434807 Msa0609080:intron 25.0%
!!! TTATAGGTTTTAGATAGGAA+AGG + chr4_2:56434828-56434847 Msa0609080:intron 25.0%
!! ACCTATTTTCATTAAGAACT+AGG + chr4_2:56434928-56434947 Msa0609080:intron 25.0%
!! TTATGTTACCTTGTTTAGTT+CGG - chr4_2:56435015-56435034 None:intergenic 25.0%
! CAAGGTAACATAATGAAATT+AGG + chr4_2:56435022-56435041 Msa0609080:intron 25.0%
! TAACTAAAGAATTGAACTTG+TGG - chr4_2:56435695-56435714 None:intergenic 25.0%
! CTATTATAAAAGTCAAGAGA+TGG + chr4_2:56435727-56435746 Msa0609080:intron 25.0%
! CCCATATCATAAATTAACAA+AGG - chr4_2:56435776-56435795 None:intergenic 25.0%
!! AAAAGGTGTATATTTGTCAA+CGG - chr4_2:56435838-56435857 None:intergenic 25.0%
! AATAATCATTCTTCTCTGTT+GGG - chr4_2:56435929-56435948 None:intergenic 25.0%
! AAATAATCATTCTTCTCTGT+TGG - chr4_2:56435930-56435949 None:intergenic 25.0%
! AACAATTAATACAGTCAACT+AGG - chr4_2:56436059-56436078 None:intergenic 25.0%
! ATTAATTGTTATACCGTTTG+AGG + chr4_2:56436069-56436088 Msa0609080:intron 25.0%
! AACAATTAATACAGTCAACT+AGG - chr4_2:56436059-56436078 None:intergenic 25.0%
! CACATACTACAATTTAGTTA+CGG - chr4_2:56436140-56436159 None:intergenic 25.0%
! ATTAAATGCATACCAAAATC+CGG - chr4_2:56436254-56436273 None:intergenic 25.0%
!! GTCAATTTCTTTTAATGATG+TGG + chr4_2:56436351-56436370 Msa0609080:intron 25.0%
! AAGAAAATGAGTCAATAACT+TGG - chr4_2:56436442-56436461 None:intergenic 25.0%
! CTTTACTAAAATAGCTTACA+AGG - chr4_2:56436683-56436702 None:intergenic 25.0%
!!! TTCTTTTATTTTCACTCTCA+AGG + chr4_2:56436867-56436886 Msa0609080:CDS 25.0%
!!! TCTTTTATTTTCACTCTCAA+GGG + chr4_2:56436868-56436887 Msa0609080:CDS 25.0%
!! TACAGTTAAATCTTATTTGC+TGG + chr4_2:56436954-56436973 Msa0609080:CDS 25.0%
!! TAATTGTTCAATAGAAGTGT+TGG - chr4_2:56437336-56437355 None:intergenic 25.0%
!!! TGAACAATTATTTTTTGTCC+TGG + chr4_2:56437346-56437365 Msa0609080:three_prime_UTR 25.0%
!!! TAATGGCACATCTTTTATTT+TGG + chr4_2:56437709-56437728 Msa0609080:three_prime_UTR 25.0%
!!! AATGGCACATCTTTTATTTT+GGG + chr4_2:56437710-56437729 Msa0609080:three_prime_UTR 25.0%
! AACAGTAATCATCTATTGAA+TGG + chr4_2:56437796-56437815 Msa0609080:three_prime_UTR 25.0%
! TCCATACTTAAGATCAAAAA+CGG - chr4_2:56437838-56437857 None:intergenic 25.0%
! TCATTGTCTACTTCATAAAA+TGG - chr4_2:56437871-56437890 None:intergenic 25.0%
!!! ATTGTTGATAATTCAGAAGA+TGG + chr4_2:56438081-56438100 Msa0609080:three_prime_UTR 25.0%
! TATGTAACAAATAAAACACG+AGG - chr4_2:56438200-56438219 None:intergenic 25.0%
!!! AAAACAATATCCTTTAGAAC+TGG + chr4_2:56438510-56438529 Msa0609080:three_prime_UTR 25.0%
! GCATTAAATCTTGAAGAAAA+AGG - chr4_2:56438552-56438571 None:intergenic 25.0%
!!! TGCTTTAAAGAGTAATACTT+GGG + chr4_2:56438619-56438638 Msa0609080:three_prime_UTR 25.0%
! AATTGAATGCAAATTTCTCT+GGG - chr4_2:56438729-56438748 None:intergenic 25.0%
! TAATTGAATGCAAATTTCTC+TGG - chr4_2:56438730-56438749 None:intergenic 25.0%
! GAATGATAAAATTCATAGGT+TGG - chr4_2:56438825-56438844 None:intergenic 25.0%
! TAAAACTTATCAGACCAAAA+TGG + chr4_2:56438854-56438873 Msa0609080:three_prime_UTR 25.0%
!!! CTGTTTTAATTTTCATGATG+TGG + chr4_2:56439187-56439206 Msa0609080:three_prime_UTR 25.0%
!! TTTAAAATTTAAATGGTGGG+AGG - chr4_2:56439292-56439311 None:intergenic 25.0%
! CAGATTTGCATAAAAAATTG+AGG - chr4_2:56439846-56439865 None:intergenic 25.0%
!! AAATCTGAAATTGATTCCAT+GGG + chr4_2:56439859-56439878 Msa0609080:three_prime_UTR 25.0%
!! AAGTCCTATAAACACATTTT+GGG - chr4_2:56440056-56440075 None:intergenic 25.0%
! AAACTCTTGTGTAAAAAACA+GGG - chr4_2:56440311-56440330 None:intergenic 25.0%
! AAAACTCTTGTGTAAAAAAC+AGG - chr4_2:56440312-56440331 None:intergenic 25.0%
! AAAATCAGTTTGTAAAGCAA+TGG - chr4_2:56440500-56440519 None:intergenic 25.0%
!!! TGCTTTACAAACTGATTTTA+TGG + chr4_2:56440501-56440520 Msa0609080:intron 25.0%
!!! GCTTTACAAACTGATTTTAT+GGG + chr4_2:56440502-56440521 Msa0609080:intron 25.0%
! AGTAACTCATAATATCCTTT+GGG - chr4_2:56440595-56440614 None:intergenic 25.0%
! AAGTAACTCATAATATCCTT+TGG - chr4_2:56440596-56440615 None:intergenic 25.0%
!! CATTTATTATCATGATTTGC+AGG + chr4_2:56440726-56440745 Msa0609080:intron 25.0%
!!! ATTAGTTTTGGTAATTGAGA+AGG - chr4_2:56440822-56440841 None:intergenic 25.0%
! AAATACTTAATTCCAGTTAC+AGG - chr4_2:56441060-56441079 None:intergenic 25.0%
! CAACAGAAAATTATGATTAC+AGG + chr4_2:56441261-56441280 Msa0609080:three_prime_UTR 25.0%
! GAAAATTATGATTACAGGTT+TGG + chr4_2:56441266-56441285 Msa0609080:three_prime_UTR 25.0%
! AAATTATGATTACAGGTTTG+GGG + chr4_2:56441268-56441287 Msa0609080:three_prime_UTR 25.0%
AGAGATCAGTTCAAATTACA+GGG + chr4_2:56429036-56429055 Msa0609080:CDS 30.0%
ACCTAAATTAGAAAGCTGAA+CGG - chr4_2:56429067-56429086 None:intergenic 30.0%
TGAACATTGAAGGAAAAAGA+GGG - chr4_2:56429095-56429114 None:intergenic 30.0%
ATGAACATTGAAGGAAAAAG+AGG - chr4_2:56429096-56429115 None:intergenic 30.0%
ACCGTAATTATGAACATTGA+AGG - chr4_2:56429105-56429124 None:intergenic 30.0%
!! CACAATGATTCGTTTGTTTT+TGG + chr4_2:56429132-56429151 Msa0609080:intron 30.0%
!! GGAACAAAAGTTGATGTATA+TGG - chr4_2:56429498-56429517 None:intergenic 30.0%
CCCAACTTTCTCTTATAAAT+AGG + chr4_2:56429516-56429535 Msa0609080:intron 30.0%
CTTTCTCTTATAAATAGGAC+CGG + chr4_2:56429521-56429540 Msa0609080:intron 30.0%
!! GGAGGGAGTATTTATTTATA+AGG + chr4_2:56429542-56429561 Msa0609080:intron 30.0%
! TCTTTGAGTTCTTAGAAATC+CGG + chr4_2:56429682-56429701 Msa0609080:intron 30.0%
GAAAATATAAAGGTGGAGTT+TGG - chr4_2:56429765-56429784 None:intergenic 30.0%
CTATCAATTTGCACAATGAT+TGG - chr4_2:56429899-56429918 None:intergenic 30.0%
CAATCATTGTGCAAATTGAT+AGG + chr4_2:56429897-56429916 Msa0609080:CDS 30.0%
CATACAACAGTGAAAAAACA+AGG - chr4_2:56430068-56430087 None:intergenic 30.0%
CTCTTTGTGATACAGTTTAT+TGG + chr4_2:56430265-56430284 Msa0609080:intron 30.0%
CTTTGTGATACAGTTTATTG+GGG + chr4_2:56430267-56430286 Msa0609080:intron 30.0%
TTAAGAAAAGGAAAAGAGGT+GGG - chr4_2:56430341-56430360 None:intergenic 30.0%
TTTAAGAAAAGGAAAAGAGG+TGG - chr4_2:56430342-56430361 None:intergenic 30.0%
GGATCAAAATAGTCCTTAAA+AGG + chr4_2:56430453-56430472 Msa0609080:intron 30.0%
TTAAGACAGAGAAAATGATG+TGG - chr4_2:56430581-56430600 None:intergenic 30.0%
TGGAGTGGATAAAATTGAAT+GGG - chr4_2:56430611-56430630 None:intergenic 30.0%
TTGGAGTGGATAAAATTGAA+TGG - chr4_2:56430612-56430631 None:intergenic 30.0%
! TTCAATTTTATCCACTCCAA+TGG + chr4_2:56430612-56430631 Msa0609080:intron 30.0%
GTGTTGAATGATAAAACCAT+TGG - chr4_2:56430631-56430650 None:intergenic 30.0%
ATACAACAAACTAAGCATGT+TGG + chr4_2:56430834-56430853 Msa0609080:intron 30.0%
! ATGGGTAATCAGAAGATTTT+TGG + chr4_2:56430906-56430925 Msa0609080:intron 30.0%
! TGGGTAATCAGAAGATTTTT+GGG + chr4_2:56430907-56430926 Msa0609080:intron 30.0%
!!! AAGATTTTTGGGTGTTGAAT+TGG + chr4_2:56430918-56430937 Msa0609080:intron 30.0%
! GTGTTGAATTGGTTGTTATT+GGG + chr4_2:56430929-56430948 Msa0609080:intron 30.0%
ATCCAAGTCTCTATTTATAG+AGG + chr4_2:56431051-56431070 Msa0609080:intron 30.0%
TCCAAGTCTCTATTTATAGA+GGG + chr4_2:56431052-56431071 Msa0609080:intron 30.0%
CATTCAACATGTTTAACCAT+TGG - chr4_2:56431385-56431404 None:intergenic 30.0%
GATTAGAAAACTCTATAGTG+TGG - chr4_2:56431491-56431510 None:intergenic 30.0%
AAAGCATGAATAAATGCACA+TGG - chr4_2:56431578-56431597 None:intergenic 30.0%
TGTTCATTATGGAAAATGAC+TGG - chr4_2:56431720-56431739 None:intergenic 30.0%
TTTCCATAATGAACAACTTC+AGG + chr4_2:56431725-56431744 Msa0609080:intron 30.0%
TTCCATAATGAACAACTTCA+GGG + chr4_2:56431726-56431745 Msa0609080:intron 30.0%
AATAGGAAATGAGTGGTATA+TGG - chr4_2:56431781-56431800 None:intergenic 30.0%
TGTAGAACACGAATAAAATG+AGG - chr4_2:56431985-56432004 None:intergenic 30.0%
TTTCTGTATTAGTATGTGAG+GGG + chr4_2:56432049-56432068 Msa0609080:intron 30.0%
AGTCTCTTGTGTAAAAAACA+GGG + chr4_2:56432140-56432159 Msa0609080:intron 30.0%
ATTAGTATGTCATTCTCTGT+TGG + chr4_2:56432257-56432276 Msa0609080:intron 30.0%
!!! TTTTAAAACAAATTGGGGGA+GGG - chr4_2:56432407-56432426 None:intergenic 30.0%
!!! TTTTTAAAACAAATTGGGGG+AGG - chr4_2:56432408-56432427 None:intergenic 30.0%
ACACGTATGTATAATTCACT+GGG - chr4_2:56432479-56432498 None:intergenic 30.0%
AACACGTATGTATAATTCAC+TGG - chr4_2:56432480-56432499 None:intergenic 30.0%
GATGTTTACAAATAGATCTC+AGG - chr4_2:56432530-56432549 None:intergenic 30.0%
!! TGTGTTGAGACTCATTTTTA+TGG + chr4_2:56432646-56432665 Msa0609080:intron 30.0%
! GTCTATTTTCCCTTTTTTTC+AGG + chr4_2:56432698-56432717 Msa0609080:intron 30.0%
TGATGAAAGGAGACATAATA+TGG - chr4_2:56432869-56432888 None:intergenic 30.0%
! CTTTTTCTCTCTTCAGAAAT+TGG + chr4_2:56432988-56433007 Msa0609080:intron 30.0%
! CGTTTTATAGAAGGAATATC+AGG + chr4_2:56433142-56433161 Msa0609080:CDS 30.0%
CATATATTCCTGTCATAAAG+CGG - chr4_2:56433489-56433508 None:intergenic 30.0%
GTGAAAAATTGTTAGGTCAA+AGG - chr4_2:56433571-56433590 None:intergenic 30.0%
TTTCTGTGCATTAAAGATTC+TGG + chr4_2:56433721-56433740 Msa0609080:CDS 30.0%
TAGTCAAATCCTTAATCATG+AGG - chr4_2:56433962-56433981 None:intergenic 30.0%
GATTGTAGATGTTCTAATCA+AGG - chr4_2:56434132-56434151 None:intergenic 30.0%
TTAGAACATCTACAATCTGT+TGG + chr4_2:56434135-56434154 Msa0609080:intron 30.0%
TAGAACATCTACAATCTGTT+GGG + chr4_2:56434136-56434155 Msa0609080:intron 30.0%
TCATCTAAACATGTTCTGTA+CGG + chr4_2:56434222-56434241 Msa0609080:intron 30.0%
TAGTAGAAGAGCTTGAAAAA+CGG - chr4_2:56434322-56434341 None:intergenic 30.0%
!!! TCACTCTCTTAACTTTTTTG+CGG + chr4_2:56434413-56434432 Msa0609080:intron 30.0%
! ACCCATTTAGTATCTTTTTG+AGG + chr4_2:56434473-56434492 Msa0609080:intron 30.0%
CACCTCAAAAAGATACTAAA+TGG - chr4_2:56434478-56434497 None:intergenic 30.0%
AACAAATGGTAATACTATCG+AGG - chr4_2:56434760-56434779 None:intergenic 30.0%
TGTCTCCTTGTTGAAATTAT+AGG + chr4_2:56434812-56434831 Msa0609080:intron 30.0%
! GCCTAGTTCTTAATGAAAAT+AGG - chr4_2:56434932-56434951 None:intergenic 30.0%
! TATGTTACCTTGTTTAGTTC+GGG - chr4_2:56435014-56435033 None:intergenic 30.0%
CTTCCACAATTCAAAAGATA+GGG + chr4_2:56435135-56435154 Msa0609080:intron 30.0%
TTCAAAAGATAGGGTTGTTA+AGG + chr4_2:56435144-56435163 Msa0609080:intron 30.0%
TGTGTGTATGTAATAACCAT+TGG + chr4_2:56435240-56435259 Msa0609080:intron 30.0%
TGTCTATGTGAATTTGTCAT+GGG + chr4_2:56435351-56435370 Msa0609080:intron 30.0%
AACATACCAAAACACTCTTT+AGG - chr4_2:56435605-56435624 None:intergenic 30.0%
ATAAACATGAAGAGACTTTC+TGG + chr4_2:56435628-56435647 Msa0609080:intron 30.0%
TAAACATGAAGAGACTTTCT+GGG + chr4_2:56435629-56435648 Msa0609080:intron 30.0%
AGAAAAGGTTTCACAAACAT+GGG - chr4_2:56435888-56435907 None:intergenic 30.0%
ATTTGATACATTATCCATGC+AGG + chr4_2:56435946-56435965 Msa0609080:intron 30.0%
ATAAAGACACAAACCTCAAA+CGG - chr4_2:56436030-56436049 None:intergenic 30.0%
TATGTGCTTCTTGAAATACA+GGG + chr4_2:56436154-56436173 Msa0609080:intron 30.0%
CATAAGTCATAGCTTCATAT+TGG + chr4_2:56436290-56436309 Msa0609080:intron 30.0%
AAATTGACCTCTTAGATAAC+AGG - chr4_2:56436339-56436358 None:intergenic 30.0%
! AATGTTTCATTCCTTCCTTT+TGG + chr4_2:56436486-56436505 Msa0609080:intron 30.0%
AATAACTGTTTGAGAAGCAA+GGG - chr4_2:56436632-56436651 None:intergenic 30.0%
! AATTAAATAGATGTACTGGC+AGG - chr4_2:56436708-56436727 None:intergenic 30.0%
AAAGAATTCACAGAGAAATC+TGG - chr4_2:56436853-56436872 None:intergenic 30.0%
TTTGGATATTACAGTTCCTT+TGG + chr4_2:56436891-56436910 Msa0609080:CDS 30.0%
TATTACAGTTCCTTTGGATA+AGG + chr4_2:56436897-56436916 Msa0609080:CDS 30.0%
GCTTACACAAAAATCCAATT+GGG - chr4_2:56436923-56436942 None:intergenic 30.0%
TGCTTACACAAAAATCCAAT+TGG - chr4_2:56436924-56436943 None:intergenic 30.0%
! AAGGTGAATCTAAAACGAAA+AGG - chr4_2:56437001-56437020 None:intergenic 30.0%
AGTATTCTTGGTTTCATTGA+AGG - chr4_2:56437020-56437039 None:intergenic 30.0%
!! TGGATCTCTATGCTTATTTT+GGG + chr4_2:56437366-56437385 Msa0609080:three_prime_UTR 30.0%
TTGGAAAAGGAAAGAAATGA+AGG + chr4_2:56437415-56437434 Msa0609080:three_prime_UTR 30.0%
!!! ATGGCACATCTTTTATTTTG+GGG + chr4_2:56437711-56437730 Msa0609080:three_prime_UTR 30.0%
TATCCAATATCACTCATTGA+AGG - chr4_2:56437745-56437764 None:intergenic 30.0%
CCATACTTAAGATCAAAAAC+GGG - chr4_2:56437837-56437856 None:intergenic 30.0%
GGTTCGAAAACTTACAAAAA+GGG + chr4_2:56438025-56438044 Msa0609080:three_prime_UTR 30.0%
! GTCTTAAAAAGTTTTCCCAA+TGG - chr4_2:56438051-56438070 None:intergenic 30.0%
! ACACTTTCTGGTGTAAAATA+TGG - chr4_2:56438241-56438260 None:intergenic 30.0%
! TTTTACTTCTAAACTGTGGA+CGG - chr4_2:56438437-56438456 None:intergenic 30.0%
! TAGCTTTTACTTCTAAACTG+TGG - chr4_2:56438441-56438460 None:intergenic 30.0%
!! ATATCCTTTAGAACTGGTTA+CGG + chr4_2:56438516-56438535 Msa0609080:three_prime_UTR 30.0%
! AGTTGCTTTCTGGATAATTA+AGG + chr4_2:56438586-56438605 Msa0609080:three_prime_UTR 30.0%
!! CTGCTTTAAAGAGTAATACT+TGG + chr4_2:56438618-56438637 Msa0609080:three_prime_UTR 30.0%
AGAGTAATACTTGGGTTTAT+TGG + chr4_2:56438627-56438646 Msa0609080:three_prime_UTR 30.0%
TATTTGCTTACAGTTATCCA+TGG + chr4_2:56438748-56438767 Msa0609080:three_prime_UTR 30.0%
TAGTGGTCTATTGTATATCA+TGG + chr4_2:56438774-56438793 Msa0609080:three_prime_UTR 30.0%
AGTGGTCTATTGTATATCAT+GGG + chr4_2:56438775-56438794 Msa0609080:three_prime_UTR 30.0%
!! GAATCATTGACTATCCATTT+TGG - chr4_2:56438871-56438890 None:intergenic 30.0%
CAATTTGGTTGTTAATGCTA+TGG + chr4_2:56438912-56438931 Msa0609080:three_prime_UTR 30.0%
!! CTCGAGTATTTTTAATTCTC+AGG + chr4_2:56439143-56439162 Msa0609080:three_prime_UTR 30.0%
TCTATAAAACAACCGGTAAT+CGG + chr4_2:56439709-56439728 Msa0609080:intron 30.0%
! CAAATCTGAAATTGATTCCA+TGG + chr4_2:56439858-56439877 Msa0609080:three_prime_UTR 30.0%
! ATGTATCCAATGCTTTTCAT+CGG + chr4_2:56439985-56440004 Msa0609080:intron 30.0%
! CAAGTCCTATAAACACATTT+TGG - chr4_2:56440057-56440076 None:intergenic 30.0%
!! CCACACAAAATTGTTTTGTT+AGG - chr4_2:56440091-56440110 None:intergenic 30.0%
! CCTAACAAAACAATTTTGTG+TGG + chr4_2:56440088-56440107 Msa0609080:intron 30.0%
AAGTCAAAAATCAAGATAGC+AGG + chr4_2:56440118-56440137 Msa0609080:intron 30.0%
AGTCAAAAATCAAGATAGCA+GGG + chr4_2:56440119-56440138 Msa0609080:intron 30.0%
! ACGTGAAGAAGTGTATAAAA+AGG + chr4_2:56440205-56440224 Msa0609080:intron 30.0%
! CGTGAAGAAGTGTATAAAAA+GGG + chr4_2:56440206-56440225 Msa0609080:intron 30.0%
TGGCTTGAATAATAACCTAA+AGG + chr4_2:56440666-56440685 Msa0609080:intron 30.0%
!! GGGCTTTCATTTATTAGTTT+TGG - chr4_2:56440834-56440853 None:intergenic 30.0%
TTGATTCCATAGATTTGTGT+GGG - chr4_2:56440854-56440873 None:intergenic 30.0%
ATCAACAATAACTTTGCTTG+AGG + chr4_2:56440869-56440888 Msa0609080:three_prime_UTR 30.0%
TAAGTTGTTTAACAACGTCA+AGG - chr4_2:56440971-56440990 None:intergenic 30.0%
AAGGTTTATTGACGCAATTA+CGG + chr4_2:56441012-56441031 Msa0609080:three_prime_UTR 30.0%
CGTATACAACACTTAACATA+CGG - chr4_2:56441127-56441146 None:intergenic 30.0%
! TGTTAAGTGTTGTATACGTT+AGG + chr4_2:56441129-56441148 Msa0609080:three_prime_UTR 30.0%
TATACGTTAGGCAGAAATAA+GGG + chr4_2:56441141-56441160 Msa0609080:three_prime_UTR 30.0%
AATGAAACAGGGAAAACAGA+GGG - chr4_2:56428791-56428810 None:intergenic 35.0%
AAATGAAACAGGGAAAACAG+AGG - chr4_2:56428792-56428811 None:intergenic 35.0%
!! AATGGAAGGTACTGGTTAAT+CGG - chr4_2:56428858-56428877 None:intergenic 35.0%
! AATGAAAGTGCGAAAATGGA+AGG - chr4_2:56428872-56428891 None:intergenic 35.0%
CACATTGTGATCCAATTCAT+CGG + chr4_2:56428893-56428912 Msa0609080:five_prime_UTR 35.0%
! GAATTGTTTCTCCGATGAAT+TGG - chr4_2:56428907-56428926 None:intergenic 35.0%
TTGATTCCATACCTTAGCTT+CGG - chr4_2:56428963-56428982 None:intergenic 35.0%
CTGTAATTTGAACTGATCTC+TGG - chr4_2:56429037-56429056 None:intergenic 35.0%
CAGAGATCAGTTCAAATTAC+AGG + chr4_2:56429035-56429054 Msa0609080:CDS 35.0%
ACCGTTCAGCTTTCTAATTT+AGG + chr4_2:56429063-56429082 Msa0609080:CDS 35.0%
! CTCCAATTTTCCAACTTTAG+CGG - chr4_2:56429249-56429268 None:intergenic 35.0%
AAGTTGGAAAATTGGAGATC+AGG + chr4_2:56429252-56429271 Msa0609080:CDS 35.0%
AGTTGGAAAATTGGAGATCA+GGG + chr4_2:56429253-56429272 Msa0609080:CDS 35.0%
AAACGCTCGGAAAAAAAATG+TGG - chr4_2:56429662-56429681 None:intergenic 35.0%
AAGAACTCAAAGAAAACGCT+CGG - chr4_2:56429675-56429694 None:intergenic 35.0%
TAGAAATCCGGATGCAAAAT+TGG + chr4_2:56429694-56429713 Msa0609080:intron 35.0%
! TCTTGTTCCAATTTTGCATC+CGG - chr4_2:56429704-56429723 None:intergenic 35.0%
GCAAATTGATAGGCTTGATT+TGG + chr4_2:56429907-56429926 Msa0609080:CDS 35.0%
TAAGAAAAGGAAAAGAGGTG+GGG - chr4_2:56430340-56430359 None:intergenic 35.0%
! CTGGCAACAACTTTAAGAAA+AGG - chr4_2:56430353-56430372 None:intergenic 35.0%
!! AGTTGTTGCCAGTTATTTTC+AGG + chr4_2:56430361-56430380 Msa0609080:intron 35.0%
! ATGATTGCTCAAGCCTTTTA+AGG - chr4_2:56430469-56430488 None:intergenic 35.0%
GAAGGTTGTCTTAGAATTCT+GGG - chr4_2:56430530-56430549 None:intergenic 35.0%
TGAAGGTTGTCTTAGAATTC+TGG - chr4_2:56430531-56430550 None:intergenic 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG - chr4_2:56430548-56430567 None:intergenic 35.0%
GTGTTGGGAATTGAAAAAGT+GGG - chr4_2:56430557-56430576 None:intergenic 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG - chr4_2:56430558-56430577 None:intergenic 35.0%
! AGAAAATGATGTGGAGTGTT+GGG - chr4_2:56430572-56430591 None:intergenic 35.0%
GAATGATAAAACCATTGGAG+TGG - chr4_2:56430626-56430645 None:intergenic 35.0%
!! AAATAAAAGTTGGTGGGGTA+GGG - chr4_2:56430653-56430672 None:intergenic 35.0%
AACAAACTAAGCATGTTGGT+TGG + chr4_2:56430838-56430857 Msa0609080:intron 35.0%
! ACAAACTAAGCATGTTGGTT+GGG + chr4_2:56430839-56430858 Msa0609080:intron 35.0%
! TGTTGGTTGGGAAATTGATT+TGG + chr4_2:56430851-56430870 Msa0609080:intron 35.0%
! GTTGGTTGGGAAATTGATTT+GGG + chr4_2:56430852-56430871 Msa0609080:intron 35.0%
!! TTGGGATTTTGGTAGCTAAA+TGG + chr4_2:56430887-56430906 Msa0609080:intron 35.0%
!! TGGGATTTTGGTAGCTAAAT+GGG + chr4_2:56430888-56430907 Msa0609080:intron 35.0%
! GGTGTTGAATTGGTTGTTAT+TGG + chr4_2:56430928-56430947 Msa0609080:intron 35.0%
GAGACTTGGATCATTTGATT+TGG - chr4_2:56431042-56431061 None:intergenic 35.0%
TCCCTCTATAAATAGAGACT+TGG - chr4_2:56431056-56431075 None:intergenic 35.0%
ACATGTTTAACCATTGGAGT+GGG - chr4_2:56431379-56431398 None:intergenic 35.0%
AACATGTTTAACCATTGGAG+TGG - chr4_2:56431380-56431399 None:intergenic 35.0%
TCTATAGTGTGGACAAATTC+AGG - chr4_2:56431480-56431499 None:intergenic 35.0%
TTCCCTGAAGTTGTTCATTA+TGG - chr4_2:56431731-56431750 None:intergenic 35.0%
CTGTATCAATAGGAAATGAG+TGG - chr4_2:56431788-56431807 None:intergenic 35.0%
! TTACTCATTTCTACTGACTG+TGG + chr4_2:56431824-56431843 Msa0609080:intron 35.0%
! TACTCATTTCTACTGACTGT+GGG + chr4_2:56431825-56431844 Msa0609080:intron 35.0%
TCGTGTTCTACAATCATTGT+CGG + chr4_2:56431993-56432012 Msa0609080:intron 35.0%
! ACAATCATTGTCGGTTGTTA+TGG + chr4_2:56432002-56432021 Msa0609080:intron 35.0%
! CAATCATTGTCGGTTGTTAT+GGG + chr4_2:56432003-56432022 Msa0609080:intron 35.0%
CAGTCTCTTGTGTAAAAAAC+AGG + chr4_2:56432139-56432158 Msa0609080:intron 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr4_2:56432145-56432164 Msa0609080:intron 35.0%
! ATTTTACAACCGTCCTAAAG+GGG - chr4_2:56432349-56432368 None:intergenic 35.0%
! CATTTTACAACCGTCCTAAA+GGG - chr4_2:56432350-56432369 None:intergenic 35.0%
! TCATTTTACAACCGTCCTAA+AGG - chr4_2:56432351-56432370 None:intergenic 35.0%
! TTTAAAACAAATTGGGGGAG+GGG - chr4_2:56432406-56432425 None:intergenic 35.0%
ACAATTAGAGACATGGAACA+AGG - chr4_2:56432552-56432571 None:intergenic 35.0%
TGTTCCATGTCTCTAATTGT+AGG + chr4_2:56432552-56432571 Msa0609080:intron 35.0%
GTTCCATGTCTCTAATTGTA+GGG + chr4_2:56432553-56432572 Msa0609080:intron 35.0%
ATACAGCAAAAGGTTGTGTA+TGG - chr4_2:56432600-56432619 None:intergenic 35.0%
CATTTGTGGTATACAGCAAA+AGG - chr4_2:56432610-56432629 None:intergenic 35.0%
TGTATACCACAAATGAAAGC+TGG + chr4_2:56432615-56432634 Msa0609080:CDS 35.0%
! TCAGGTTGTAAATCTTAAGG+AGG + chr4_2:56432716-56432735 Msa0609080:intron 35.0%
!! CAACATGCATTGTGTTGATT+TGG + chr4_2:56432822-56432841 Msa0609080:intron 35.0%
TCTCTCTTCAGAAATTGGAA+TGG + chr4_2:56432993-56433012 Msa0609080:intron 35.0%
CTCTCTTCAGAAATTGGAAT+GGG + chr4_2:56432994-56433013 Msa0609080:intron 35.0%
GTTGATGCAACATATGAACA+GGG + chr4_2:56433449-56433468 Msa0609080:intron 35.0%
TTCTCTTGTGTCAATTGTTG+TGG + chr4_2:56433690-56433709 Msa0609080:CDS 35.0%
ATATGTTTACACCAGCTTGA+GGG - chr4_2:56434067-56434086 None:intergenic 35.0%
CATATGTATCATACCCAACT+TGG + chr4_2:56434082-56434101 Msa0609080:intron 35.0%
!!! CACTCTCTTAACTTTTTTGC+GGG + chr4_2:56434414-56434433 Msa0609080:intron 35.0%
!!! TTAGTATCTTTTTGAGGTGC+TGG + chr4_2:56434479-56434498 Msa0609080:intron 35.0%
!!! TAGTATCTTTTTGAGGTGCT+GGG + chr4_2:56434480-56434499 Msa0609080:intron 35.0%
TGCATAGCATGTATACACAT+AGG - chr4_2:56434650-56434669 None:intergenic 35.0%
AAGTACCCGAGAAAAAAAGA+GGG - chr4_2:56434735-56434754 None:intergenic 35.0%
! AAAGTACCCGAGAAAAAAAG+AGG - chr4_2:56434736-56434755 None:intergenic 35.0%
TGCATGGAGAAAGAAACAAA+TGG - chr4_2:56434774-56434793 None:intergenic 35.0%
! CCTATCTTTTGAATTGTGGA+AGG - chr4_2:56435137-56435156 None:intergenic 35.0%
CCTTCCACAATTCAAAAGAT+AGG + chr4_2:56435134-56435153 Msa0609080:intron 35.0%
! CAACCCTATCTTTTGAATTG+TGG - chr4_2:56435141-56435160 None:intergenic 35.0%
ATAGGGTTGTTAAGGAATCA+TGG + chr4_2:56435152-56435171 Msa0609080:intron 35.0%
TAGGGTTGTTAAGGAATCAT+GGG + chr4_2:56435153-56435172 Msa0609080:intron 35.0%
TCATATCAAGTGTACCAACA+CGG - chr4_2:56435276-56435295 None:intergenic 35.0%
CTGTCTATGTGAATTTGTCA+TGG + chr4_2:56435350-56435369 Msa0609080:intron 35.0%
! CATACGAATTTTCCTTGTCT+GGG - chr4_2:56435445-56435464 None:intergenic 35.0%
! TGTTTTCTATTTCGACCTTG+GGG - chr4_2:56435469-56435488 None:intergenic 35.0%
! CTGTTTTCTATTTCGACCTT+GGG - chr4_2:56435470-56435489 None:intergenic 35.0%
! TCTGTTTTCTATTTCGACCT+TGG - chr4_2:56435471-56435490 None:intergenic 35.0%
! AATTTTGAACTGTAGAGGTG+GGG - chr4_2:56435512-56435531 None:intergenic 35.0%
! GAATTTTGAACTGTAGAGGT+GGG - chr4_2:56435513-56435532 None:intergenic 35.0%
! ACTGGAATTTTGAACTGTAG+AGG - chr4_2:56435517-56435536 None:intergenic 35.0%
ACAGTTCAAAATTCCAGTGA+AGG + chr4_2:56435519-56435538 Msa0609080:intron 35.0%
AAGGTAGATCCTCTTAGATA+TGG + chr4_2:56435538-56435557 Msa0609080:intron 35.0%
AAAAGAGAGCCATATCTAAG+AGG - chr4_2:56435550-56435569 None:intergenic 35.0%
! ACCAAAACACTCTTTAGGAA+GGG - chr4_2:56435600-56435619 None:intergenic 35.0%
! TACCAAAACACTCTTTAGGA+AGG - chr4_2:56435601-56435620 None:intergenic 35.0%
AACTAGCTGCTATTAAAGCT+GGG - chr4_2:56435655-56435674 None:intergenic 35.0%
AAACTAGCTGCTATTAAAGC+TGG - chr4_2:56435656-56435675 None:intergenic 35.0%
CAGAAAAGGTTTCACAAACA+TGG - chr4_2:56435889-56435908 None:intergenic 35.0%
CTGATAATATGGCACAGAAA+AGG - chr4_2:56435903-56435922 None:intergenic 35.0%
! CTTTTCTGTGCCATATTATC+AGG + chr4_2:56435901-56435920 Msa0609080:intron 35.0%
!!! CAATTGCAGGACTATTTTTG+AGG + chr4_2:56436014-56436033 Msa0609080:CDS 35.0%
GTATGTGCTTCTTGAAATAC+AGG + chr4_2:56436153-56436172 Msa0609080:intron 35.0%
TATGACTTATGACATGTGAG+AGG - chr4_2:56436281-56436300 None:intergenic 35.0%
GCTATTACCTGTTATCTAAG+AGG + chr4_2:56436329-56436348 Msa0609080:intron 35.0%
TGTTCTCCTAGAGGATATAT+TGG - chr4_2:56436532-56436551 None:intergenic 35.0%
CAATAACTGTTTGAGAAGCA+AGG - chr4_2:56436633-56436652 None:intergenic 35.0%
! TATTGACTGTCAGTCTCTTA+TGG + chr4_2:56436648-56436667 Msa0609080:CDS 35.0%
TGTCAGTCTCTTATGGTATA+TGG + chr4_2:56436655-56436674 Msa0609080:intron 35.0%
ATATCATCCTTCTTAGCTGA+TGG + chr4_2:56436799-56436818 Msa0609080:CDS 35.0%
AACAATTCCATCAGCTAAGA+AGG - chr4_2:56436809-56436828 None:intergenic 35.0%
! TATTTTCACTCTCAAGGGTT+TGG + chr4_2:56436873-56436892 Msa0609080:CDS 35.0%
! GGATTTTTGTGTAAGCAACA+CGG + chr4_2:56436927-56436946 Msa0609080:CDS 35.0%
! AAATCTTATTTGCTGGAGCA+AGG + chr4_2:56436961-56436980 Msa0609080:CDS 35.0%
GAAACCAAGAATACTAAACC+TGG + chr4_2:56437025-56437044 Msa0609080:three_prime_UTR 35.0%
TTCTCCAGGTTTAGTATTCT+TGG - chr4_2:56437032-56437051 None:intergenic 35.0%
TTCCAAAGATAGAGTAAGGT+GGG - chr4_2:56437129-56437148 None:intergenic 35.0%
TTGCTTCCAAAGATAGAGTA+AGG - chr4_2:56437133-56437152 None:intergenic 35.0%
! CTATCTTTGGAAGCAAATAC+TGG + chr4_2:56437137-56437156 Msa0609080:three_prime_UTR 35.0%
AAGCAAATACTGGCACATTT+GGG + chr4_2:56437147-56437166 Msa0609080:three_prime_UTR 35.0%
CAAAATAAGCATAGAGATCC+AGG - chr4_2:56437367-56437386 None:intergenic 35.0%
! CTGGATCTCTATGCTTATTT+TGG + chr4_2:56437365-56437384 Msa0609080:three_prime_UTR 35.0%
GTGAAAAAATAGCCATAGCT+TGG + chr4_2:56437396-56437415 Msa0609080:three_prime_UTR 35.0%
AAATAGCCATAGCTTGGAAA+AGG + chr4_2:56437402-56437421 Msa0609080:three_prime_UTR 35.0%
! TTCTTTCCTTTTCCAAGCTA+TGG - chr4_2:56437411-56437430 None:intergenic 35.0%
!!! TCGAAGTTGGAGCTTTTTTA+TGG - chr4_2:56437510-56437529 None:intergenic 35.0%
AAGACTCAAGAAATCGAAGT+TGG - chr4_2:56437523-56437542 None:intergenic 35.0%
TGAGTCTTCTTCTGTGAATA+TGG + chr4_2:56437535-56437554 Msa0609080:three_prime_UTR 35.0%
TCTTCTTCTGTGAATATGGA+GGG + chr4_2:56437539-56437558 Msa0609080:three_prime_UTR 35.0%
! ATTCCTCTAGTTCAGTTTGT+CGG + chr4_2:56437563-56437582 Msa0609080:three_prime_UTR 35.0%
GTTCCTTCAATGAGTGATAT+TGG + chr4_2:56437739-56437758 Msa0609080:three_prime_UTR 35.0%
!! CCCGTTTTTGATCTTAAGTA+TGG + chr4_2:56437834-56437853 Msa0609080:three_prime_UTR 35.0%
AATATCTCCGCTTCAATATC+TGG + chr4_2:56437904-56437923 Msa0609080:three_prime_UTR 35.0%
GGGTTCGAAAACTTACAAAA+AGG + chr4_2:56438024-56438043 Msa0609080:three_prime_UTR 35.0%
AAACTTACAAAAAGGGCCAT+TGG + chr4_2:56438032-56438051 Msa0609080:three_prime_UTR 35.0%
AACTTACAAAAAGGGCCATT+GGG + chr4_2:56438033-56438052 Msa0609080:three_prime_UTR 35.0%
ATAACCTCATTTACTGAAGC+CGG + chr4_2:56438110-56438129 Msa0609080:intron 35.0%
ATAGTTACATCCACATTGTC+TGG - chr4_2:56438304-56438323 None:intergenic 35.0%
GGATGTAACTATAGAGTTGA+AGG + chr4_2:56438312-56438331 Msa0609080:three_prime_UTR 35.0%
TAACTATAGAGTTGAAGGAC+TGG + chr4_2:56438317-56438336 Msa0609080:three_prime_UTR 35.0%
! TTTACCGTAACCAGTTCTAA+AGG - chr4_2:56438523-56438542 None:intergenic 35.0%
ACAGTTATCCATGGTATTAG+TGG + chr4_2:56438757-56438776 Msa0609080:three_prime_UTR 35.0%
ACAATAGACCACTAATACCA+TGG - chr4_2:56438768-56438787 None:intergenic 35.0%
TTGTTAATGCTATGGATCGT+TGG + chr4_2:56438920-56438939 Msa0609080:three_prime_UTR 35.0%
ACAACTGCTATGTTGAAACA+TGG + chr4_2:56438977-56438996 Msa0609080:three_prime_UTR 35.0%
!! ATACAAGCTTTACTTTTCCC+CGG + chr4_2:56439064-56439083 Msa0609080:three_prime_UTR 35.0%
TTCTCAAGAATGTCATTCGT+GGG - chr4_2:56439350-56439369 None:intergenic 35.0%
ATTCTCAAGAATGTCATTCG+TGG - chr4_2:56439351-56439370 None:intergenic 35.0%
AGTACCATCTCAATATGCAA+CGG - chr4_2:56439492-56439511 None:intergenic 35.0%
!!! ATGACATCTTTTTGGGTTGT+GGG - chr4_2:56439550-56439569 None:intergenic 35.0%
! GGATGACATGACATCTTTTT+GGG - chr4_2:56439557-56439576 None:intergenic 35.0%
! TGGATGACATGACATCTTTT+TGG - chr4_2:56439558-56439577 None:intergenic 35.0%
TCATCCATGTTAACCACTAA+TGG + chr4_2:56439571-56439590 Msa0609080:three_prime_UTR 35.0%
AACTCCATTAGTGGTTAACA+TGG - chr4_2:56439578-56439597 None:intergenic 35.0%
CAGTTCTTTAACTCCATTAG+TGG - chr4_2:56439587-56439606 None:intergenic 35.0%
GTAATATCAAGTCCACTTCA+AGG - chr4_2:56439633-56439652 None:intergenic 35.0%
! AGTGGACTTGATATTACATG+AGG + chr4_2:56439636-56439655 Msa0609080:three_prime_UTR 35.0%
AGTTATGAGATTCCGATTAC+CGG - chr4_2:56439724-56439743 None:intergenic 35.0%
TGTAACCAATGTCTCTCTAT+AGG + chr4_2:56439750-56439769 Msa0609080:intron 35.0%
CATATCCTATAGAGAGACAT+TGG - chr4_2:56439758-56439777 None:intergenic 35.0%
CAATGTCTCTCTATAGGATA+TGG + chr4_2:56439756-56439775 Msa0609080:intron 35.0%
! AGATTTTACCTTGCAGATTG+AGG + chr4_2:56439792-56439811 Msa0609080:intron 35.0%
TGCATAAAAAATTGAGGTGC+TGG - chr4_2:56439840-56439859 None:intergenic 35.0%
GTAGAATTCCAGCTGTTATA+CGG - chr4_2:56439885-56439904 None:intergenic 35.0%
CTACAATTGCTTAAGCTAGA+AGG + chr4_2:56439901-56439920 Msa0609080:three_prime_UTR 35.0%
CATGTATCCAATGCTTAGAT+AGG + chr4_2:56440029-56440048 Msa0609080:intron 35.0%
AGGACCCAAAATGTGTTTAT+AGG + chr4_2:56440049-56440068 Msa0609080:intron 35.0%
AGTGGTTCATTAACAGATCA+AGG - chr4_2:56440150-56440169 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr4_2:56432145-56432164 None:intergenic 35.0%
! ACACAAGAGTTTTACACAAG+AGG + chr4_2:56440319-56440338 Msa0609080:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - chr4_2:56440365-56440384 None:intergenic 35.0%
AAAAAACTCAAGTCCCACAT+TGG + chr4_2:56440434-56440453 Msa0609080:intron 35.0%
AAAAACTCAAGTCCCACATT+GGG + chr4_2:56440435-56440454 Msa0609080:intron 35.0%
ACTATATCTCTACCCAATGT+GGG - chr4_2:56440450-56440469 None:intergenic 35.0%
ACATATCAAGAACAACCCAA+AGG + chr4_2:56440577-56440596 Msa0609080:intron 35.0%
!!! GTTTTAGGGTTAGAAGCTAT+AGG + chr4_2:56440617-56440636 Msa0609080:intron 35.0%
GGAAAACACTAGTGACTTAA+AGG + chr4_2:56440638-56440657 Msa0609080:intron 35.0%
AACACTAGTGACTTAAAGGT+TGG + chr4_2:56440642-56440661 Msa0609080:intron 35.0%
CATTGACAAGAATCTTTCTC+CGG + chr4_2:56440758-56440777 Msa0609080:three_prime_UTR 35.0%
! GTTGATTCCATAGATTTGTG+TGG - chr4_2:56440855-56440874 None:intergenic 35.0%
AATAACTTTGCTTGAGGAAG+TGG + chr4_2:56440875-56440894 Msa0609080:three_prime_UTR 35.0%
ACAGGCTAAGATAAATGCTT+TGG + chr4_2:56440908-56440927 Msa0609080:three_prime_UTR 35.0%
AATGCTTTGGTCAACGATAT+TGG + chr4_2:56440921-56440940 Msa0609080:three_prime_UTR 35.0%
CAACATATTGAGTCAATGCA+AGG + chr4_2:56440993-56441012 Msa0609080:three_prime_UTR 35.0%
TACTTAATTCCAGTTACAGG+AGG - chr4_2:56441057-56441076 None:intergenic 35.0%
GTATACGTTAGGCAGAAATA+AGG + chr4_2:56441140-56441159 Msa0609080:three_prime_UTR 35.0%
ATTAAGCAGTAGGGAATGAT+AGG + chr4_2:56441207-56441226 Msa0609080:three_prime_UTR 35.0%
ATGAAACAGGGAAAACAGAG+GGG - chr4_2:56428790-56428809 None:intergenic 40.0%
!! ATGGAAGGTACTGGTTAATC+GGG - chr4_2:56428857-56428876 None:intergenic 40.0%
! GTGGAATGAAAGTGCGAAAA+TGG - chr4_2:56428876-56428895 None:intergenic 40.0%
CGATGAATTGGATCACAATG+TGG - chr4_2:56428895-56428914 None:intergenic 40.0%
TGATTCCATACCTTAGCTTC+GGG - chr4_2:56428962-56428981 None:intergenic 40.0%
! ATCAATCCTAGCAAGAGCAT+TGG + chr4_2:56428978-56428997 Msa0609080:CDS 40.0%
TGTATTCCAATGCTCTTGCT+AGG - chr4_2:56428987-56429006 None:intergenic 40.0%
TGGAATACACGCTCAAATAC+TGG + chr4_2:56428998-56429017 Msa0609080:CDS 40.0%
! CAATTTTCCAACTTTAGCGG+TGG - chr4_2:56429246-56429265 None:intergenic 40.0%
CACCGCTAAAGTTGGAAAAT+TGG + chr4_2:56429244-56429263 Msa0609080:CDS 40.0%
GAGATCAGGGTTTGTCAATT+TGG + chr4_2:56429266-56429285 Msa0609080:intron 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr4_2:56429524-56429543 Msa0609080:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG + chr4_2:56429525-56429544 Msa0609080:intron 40.0%
!! TAGGCTTGATTTGGTTCTTG+AGG + chr4_2:56429916-56429935 Msa0609080:CDS 40.0%
! AAGAGACTGATTTCACTACC+TGG - chr4_2:56429975-56429994 None:intergenic 40.0%
AATCAGTCTCTTGCGATTAC+TGG + chr4_2:56429983-56430002 Msa0609080:intron 40.0%
ATCAGTCTCTTGCGATTACT+GGG + chr4_2:56429984-56430003 Msa0609080:intron 40.0%
GGGAATTCATTGTAGAGTGA+TGG + chr4_2:56430012-56430031 Msa0609080:intron 40.0%
! GACTGTAAAGCTTTAACAGC+TGG - chr4_2:56430046-56430065 None:intergenic 40.0%
TGTGATACAGTTTATTGGGG+CGG + chr4_2:56430270-56430289 Msa0609080:intron 40.0%
AAGAAAAGGAAAAGAGGTGG+GGG - chr4_2:56430339-56430358 None:intergenic 40.0%
GTTGTCTTAGAATTCTGGGT+AGG - chr4_2:56430526-56430545 None:intergenic 40.0%
GAGAAAATGATGTGGAGTGT+TGG - chr4_2:56430573-56430592 None:intergenic 40.0%
!! GAAATAAAAGTTGGTGGGGT+AGG - chr4_2:56430654-56430673 None:intergenic 40.0%
TGGATAAATGCTGTGACACT+TGG - chr4_2:56431189-56431208 None:intergenic 40.0%
CATTTCTCTTTCTCTCTCTG+CGG + chr4_2:56431207-56431226 Msa0609080:intron 40.0%
TACTCAACATGTTGAAAGCC+TGG - chr4_2:56431317-56431336 None:intergenic 40.0%
ATGTTTAACCATTGGAGTGG+GGG - chr4_2:56431377-56431396 None:intergenic 40.0%
CATGTTTAACCATTGGAGTG+GGG - chr4_2:56431378-56431397 None:intergenic 40.0%
TTCAATAACCCCATTGCACT+TGG + chr4_2:56431410-56431429 Msa0609080:intron 40.0%
ATCTTAGACCAAGTGCAATG+GGG - chr4_2:56431421-56431440 None:intergenic 40.0%
CATCTTAGACCAAGTGCAAT+GGG - chr4_2:56431422-56431441 None:intergenic 40.0%
ACATCTTAGACCAAGTGCAA+TGG - chr4_2:56431423-56431442 None:intergenic 40.0%
GTGTGGACAAATATGAGCTT+GGG - chr4_2:56431513-56431532 None:intergenic 40.0%
AGTGTGGACAAATATGAGCT+TGG - chr4_2:56431514-56431533 None:intergenic 40.0%
!! TAGGATTGAACTCTAGAGTG+TGG - chr4_2:56431530-56431549 None:intergenic 40.0%
!! ACACTCTAGAGTTCAATCCT+AGG + chr4_2:56431529-56431548 Msa0609080:intron 40.0%
! CTTGAGGGACTGTTGTTATT+GGG + chr4_2:56431552-56431571 Msa0609080:intron 40.0%
!! TCATGTCTCTAGTCGTTTTG+GGG - chr4_2:56431638-56431657 None:intergenic 40.0%
!! GTCATGTCTCTAGTCGTTTT+GGG - chr4_2:56431639-56431658 None:intergenic 40.0%
GAACAACTTCAGGGAAGAAT+AGG + chr4_2:56431735-56431754 Msa0609080:intron 40.0%
TCATTCCATCTGCAATCTGA+AGG - chr4_2:56431854-56431873 None:intergenic 40.0%
TGAAGTTGTTGTCATGTGAC+TGG + chr4_2:56432090-56432109 Msa0609080:intron 40.0%
TTACACAAGAGACTGTTTCC+AGG - chr4_2:56432134-56432153 None:intergenic 40.0%
ACAGAAATAAAAGGGCAACC+CGG - chr4_2:56432237-56432256 None:intergenic 40.0%
GATTTGAACTCCATCTCTCA+AGG - chr4_2:56432327-56432346 None:intergenic 40.0%
ATGGAGTTCAAATCCCCTTT+AGG + chr4_2:56432333-56432352 Msa0609080:intron 40.0%
! AGTTCAAATCCCCTTTAGGA+CGG + chr4_2:56432337-56432356 Msa0609080:intron 40.0%
TGTATGGTTATAGACGCCAT+GGG - chr4_2:56432584-56432603 None:intergenic 40.0%
TTGTAAATCTTAAGGAGGCG+CGG + chr4_2:56432721-56432740 Msa0609080:CDS 40.0%
TCAAACCTGAGAGATGATGA+TGG + chr4_2:56433091-56433110 Msa0609080:CDS 40.0%
!! GGTGCAAAGAGAGTATTCTT+TGG + chr4_2:56433112-56433131 Msa0609080:CDS 40.0%
!! GCAAAGAGAGTATTCTTTGG+AGG + chr4_2:56433115-56433134 Msa0609080:CDS 40.0%
ACTGAATTGAACAGTCCACT+TGG + chr4_2:56433298-56433317 Msa0609080:CDS 40.0%
CTGAATTGAACAGTCCACTT+GGG + chr4_2:56433299-56433318 Msa0609080:CDS 40.0%
TTCACTTAATGCAGGGCAAA+TGG - chr4_2:56433353-56433372 None:intergenic 40.0%
TAAGTGAACCAGGTCAGTAA+AGG + chr4_2:56433365-56433384 Msa0609080:intron 40.0%
TCATATGTTGCATCAACCTC+TGG - chr4_2:56433446-56433465 None:intergenic 40.0%
! GGTTGATGCAACATATGAAC+AGG + chr4_2:56433448-56433467 Msa0609080:intron 40.0%
CAGGGGAAATGTAGATTTCA+AGG + chr4_2:56433519-56433538 Msa0609080:CDS 40.0%
ATTGTTAGGTCAAAGGAGAG+AGG - chr4_2:56433564-56433583 None:intergenic 40.0%
TATGTTTACACCAGCTTGAG+GGG - chr4_2:56434066-56434085 None:intergenic 40.0%
CATATGTTTACACCAGCTTG+AGG - chr4_2:56434068-56434087 None:intergenic 40.0%
! TCATACCCAACTTGGTAACT+TGG + chr4_2:56434090-56434109 Msa0609080:intron 40.0%
GAACACCAAGTTACCAAGTT+GGG - chr4_2:56434098-56434117 None:intergenic 40.0%
TGAACACCAAGTTACCAAGT+TGG - chr4_2:56434099-56434118 None:intergenic 40.0%
AACATCTACAATCTGTTGGG+TGG + chr4_2:56434139-56434158 Msa0609080:intron 40.0%
TTGTCACAATATGGCTGCAA+AGG + chr4_2:56434288-56434307 Msa0609080:intron 40.0%
AGCTCTTCTACTACTCTCTT+TGG + chr4_2:56434329-56434348 Msa0609080:intron 40.0%
TCAATGGCTCAAGAAATAGG+TGG - chr4_2:56434365-56434384 None:intergenic 40.0%
CGATCAATGGCTCAAGAAAT+AGG - chr4_2:56434368-56434387 None:intergenic 40.0%
TGGCTTACAGTTTCGATCAA+TGG - chr4_2:56434381-56434400 None:intergenic 40.0%
ATCGAAACTGTAAGCCATTG+TGG + chr4_2:56434384-56434403 Msa0609080:intron 40.0%
ACTGCATTAAAAGCTCAAGC+TGG - chr4_2:56434712-56434731 None:intergenic 40.0%
!!! TGCAGTCCCTCTTTTTTTCT+CGG + chr4_2:56434726-56434745 Msa0609080:CDS 40.0%
! TTACCTTGTTTAGTTCGGGT+GGG - chr4_2:56435010-56435029 None:intergenic 40.0%
CATATCAAGTGTACCAACAC+GGG - chr4_2:56435275-56435294 None:intergenic 40.0%
! CCATACGAATTTTCCTTGTC+TGG - chr4_2:56435446-56435465 None:intergenic 40.0%
CCAGACAAGGAAAATTCGTA+TGG + chr4_2:56435443-56435462 Msa0609080:intron 40.0%
! GGAATTTTGAACTGTAGAGG+TGG - chr4_2:56435514-56435533 None:intergenic 40.0%
GAAGGGAAAACATATGCAGA+AGG - chr4_2:56435583-56435602 None:intergenic 40.0%
!!! TCCCTTCCTAAAGAGTGTTT+TGG + chr4_2:56435596-56435615 Msa0609080:intron 40.0%
CAAAGGAAATAAGCCGTAGA+AGG - chr4_2:56435759-56435778 None:intergenic 40.0%
GTATATTTGTCAACGGCGTT+AGG - chr4_2:56435831-56435850 None:intergenic 40.0%
GTTATCTCCTTCAGAAAGAC+TGG - chr4_2:56435972-56435991 None:intergenic 40.0%
ATAACGACAGTAACTTGACC+AGG + chr4_2:56435987-56436006 Msa0609080:CDS 40.0%
TTGACCAGGATTACAATTGC+AGG + chr4_2:56436001-56436020 Msa0609080:CDS 40.0%
TAGTCCTGCAATTGTAATCC+TGG - chr4_2:56436008-56436027 None:intergenic 40.0%
!!! ACAACAAGCTTTTCAAGTGC+CGG + chr4_2:56436232-56436251 Msa0609080:CDS 40.0%
! AAAAGCTTCTAGCTGCCAAA+AGG - chr4_2:56436504-56436523 None:intergenic 40.0%
TCTCCTAGAGGATATATTGG+CGG - chr4_2:56436529-56436548 None:intergenic 40.0%
GATGGAATTGTTGTCAATCG+TGG + chr4_2:56436817-56436836 Msa0609080:CDS 40.0%
ATCCCACCTTACTCTATCTT+TGG + chr4_2:56437124-56437143 Msa0609080:three_prime_UTR 40.0%
CTTCCAAAGATAGAGTAAGG+TGG - chr4_2:56437130-56437149 None:intergenic 40.0%
GAAGCAAATACTGGCACATT+TGG + chr4_2:56437146-56437165 Msa0609080:three_prime_UTR 40.0%
!! TGCTTGCTTTGAAGTAGCTA+TGG + chr4_2:56437226-56437245 Msa0609080:three_prime_UTR 40.0%
GAGGAGGAACCTTTAACAAT+GGG - chr4_2:56437268-56437287 None:intergenic 40.0%
GCTAGGAATACATCTTTCAG+TGG + chr4_2:56437440-56437459 Msa0609080:three_prime_UTR 40.0%
GTCTTCTTCTGTGAATATGG+AGG + chr4_2:56437538-56437557 Msa0609080:three_prime_UTR 40.0%
TACAACAATAGCACCACCAA+GGG - chr4_2:56437621-56437640 None:intergenic 40.0%
ATACAACAATAGCACCACCA+AGG - chr4_2:56437622-56437641 None:intergenic 40.0%
TTGTATCATCCACTTTACGC+TGG + chr4_2:56437636-56437655 Msa0609080:three_prime_UTR 40.0%
TGTATCATCCACTTTACGCT+GGG + chr4_2:56437637-56437656 Msa0609080:three_prime_UTR 40.0%
GAGCATTTGGCATGTGATAA+TGG + chr4_2:56437692-56437711 Msa0609080:three_prime_UTR 40.0%
AGAAAACAGCTGTCAGTTGA+GGG - chr4_2:56437768-56437787 None:intergenic 40.0%
!! TCAACTGACAGCTGTTTTCT+GGG + chr4_2:56437768-56437787 Msa0609080:three_prime_UTR 40.0%
ACGAACACCAGATATTGAAG+CGG - chr4_2:56437914-56437933 None:intergenic 40.0%
TCAATATCTGGTGTTCGTCT+TGG + chr4_2:56437916-56437935 Msa0609080:three_prime_UTR 40.0%
!! TACATCGGGTTGGAATACTT+GGG + chr4_2:56437968-56437987 Msa0609080:three_prime_UTR 40.0%
!! ACACCAGAAAGTGTCATAGA+AGG + chr4_2:56438247-56438266 Msa0609080:intron 40.0%
!! CACCAGAAAGTGTCATAGAA+GGG + chr4_2:56438248-56438267 Msa0609080:intron 40.0%
TTCCCTTCTATGACACTTTC+TGG - chr4_2:56438253-56438272 None:intergenic 40.0%
TTCTTCAAGTGCGGAAAACT+GGG - chr4_2:56438280-56438299 None:intergenic 40.0%
! TCTTGAAGGTGCACAAGATA+TGG + chr4_2:56438348-56438367 Msa0609080:three_prime_UTR 40.0%
CACAAGATATGGCCAAAAGA+TGG + chr4_2:56438359-56438378 Msa0609080:three_prime_UTR 40.0%
AAGATATGGCCAAAAGATGG+TGG + chr4_2:56438362-56438381 Msa0609080:three_prime_UTR 40.0%
! ACTAGAGAACCACCATCTTT+TGG - chr4_2:56438374-56438393 None:intergenic 40.0%
TTCTCTAGTCAAGGAGACAT+AGG + chr4_2:56438385-56438404 Msa0609080:three_prime_UTR 40.0%
! CTCTGGGAAATACAAACTGA+TGG - chr4_2:56438713-56438732 None:intergenic 40.0%
TCTCTGTCTCTCTCTCAATT+TGG + chr4_2:56438897-56438916 Msa0609080:three_prime_UTR 40.0%
!! TACAAGCTTTACTTTTCCCC+GGG + chr4_2:56439065-56439084 Msa0609080:three_prime_UTR 40.0%
ATATCTCAAGTTTGCATCCC+GGG - chr4_2:56439085-56439104 None:intergenic 40.0%
CATATCTCAAGTTTGCATCC+CGG - chr4_2:56439086-56439105 None:intergenic 40.0%
CTTCCATATTCCCATGTCAT+GGG - chr4_2:56439229-56439248 None:intergenic 40.0%
ACTTCCATATTCCCATGTCA+TGG - chr4_2:56439230-56439249 None:intergenic 40.0%
! TCTCACCTGTTGTTTAGACA+CGG + chr4_2:56439456-56439475 Msa0609080:three_prime_UTR 40.0%
CAATATGCAACGGTTACAAC+AGG - chr4_2:56439482-56439501 None:intergenic 40.0%
GTAACCGTTGCATATTGAGA+TGG + chr4_2:56439485-56439504 Msa0609080:three_prime_UTR 40.0%
CATATTGAGATGGTACTTGC+AGG + chr4_2:56439495-56439514 Msa0609080:three_prime_UTR 40.0%
TACTTGCAGGTTGTAGTTCA+AGG + chr4_2:56439508-56439527 Msa0609080:three_prime_UTR 40.0%
ACTTGCAGGTTGTAGTTCAA+GGG + chr4_2:56439509-56439528 Msa0609080:three_prime_UTR 40.0%
!!! CATGACATCTTTTTGGGTTG+TGG - chr4_2:56439551-56439570 None:intergenic 40.0%
AGGATAATGCCGATGATGAA+AGG + chr4_2:56439656-56439675 Msa0609080:three_prime_UTR 40.0%
GGATAATGCCGATGATGAAA+GGG + chr4_2:56439657-56439676 Msa0609080:three_prime_UTR 40.0%
ATGGATCAGCTAGGAAACAT+TGG + chr4_2:56439943-56439962 Msa0609080:three_prime_UTR 40.0%
! GATTGACCGATGAAAAGCAT+TGG - chr4_2:56439994-56440013 None:intergenic 40.0%
TTTGGGTCCTATCTAAGCAT+TGG - chr4_2:56440039-56440058 None:intergenic 40.0%
GGTTCATGGATAATACAGAG+TGG - chr4_2:56440168-56440187 None:intergenic 40.0%
! ACGTTTAGAGCGATTTGACT+TGG - chr4_2:56440189-56440208 None:intergenic 40.0%
AGTGTATAAAAAGGGCAACC+CGG + chr4_2:56440214-56440233 Msa0609080:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr4_2:56440280-56440299 None:intergenic 40.0%
TAGACTTCTTCACGTCTGAA+GGG - chr4_2:56440406-56440425 None:intergenic 40.0%
ATAGACTTCTTCACGTCTGA+AGG - chr4_2:56440407-56440426 None:intergenic 40.0%
TCAGACGTGAAGAAGTCTAT+TGG + chr4_2:56440407-56440426 Msa0609080:intron 40.0%
GACTATATCTCTACCCAATG+TGG - chr4_2:56440451-56440470 None:intergenic 40.0%
GTATCTCGATCATTGAAGAG+AGG + chr4_2:56440550-56440569 Msa0609080:intron 40.0%
! CTAGTGACTTAAAGGTTGGT+TGG + chr4_2:56440646-56440665 Msa0609080:intron 40.0%
TGAAAGCCCACACAAATCTA+TGG + chr4_2:56440845-56440864 Msa0609080:three_prime_UTR 40.0%
AAGGGCTAGGAAAGAATGAT+AGG + chr4_2:56441159-56441178 Msa0609080:three_prime_UTR 40.0%
TGTTGCAGACATTAAGCAGT+AGG + chr4_2:56441197-56441216 Msa0609080:three_prime_UTR 40.0%
GTTGCAGACATTAAGCAGTA+GGG + chr4_2:56441198-56441217 Msa0609080:three_prime_UTR 40.0%
!!! TGTGGGTTGTTTGGTTTTCG+CGG - chr4_2:56428765-56428784 None:intergenic 45.0%
!! TTCGGGTCAGTGAAAGCATT+TGG - chr4_2:56428834-56428853 None:intergenic 45.0%
!! AGGTACTGGTTAATCGGGTT+CGG - chr4_2:56428852-56428871 None:intergenic 45.0%
! AGTGCGAAAATGGAAGGTAC+TGG - chr4_2:56428866-56428885 None:intergenic 45.0%
GATTCCATACCTTAGCTTCG+GGG - chr4_2:56428961-56428980 None:intergenic 45.0%
AATGTCACCACCGCTAAAGT+TGG + chr4_2:56429236-56429255 Msa0609080:CDS 45.0%
GTCTGTACATTGCTCACTGA+CGG - chr4_2:56429872-56429891 None:intergenic 45.0%
! GACTGATTTCACTACCTGGT+TGG - chr4_2:56429971-56429990 None:intergenic 45.0%
GTGATACAGTTTATTGGGGC+GGG + chr4_2:56430271-56430290 Msa0609080:intron 45.0%
GACACTTGGCATGTTACGAT+TGG - chr4_2:56431175-56431194 None:intergenic 45.0%
CGCAGAGAGAGAAAGAGAAA+TGG - chr4_2:56431209-56431228 None:intergenic 45.0%
TGTTTAACCATTGGAGTGGG+GGG - chr4_2:56431376-56431395 None:intergenic 45.0%
AGAGTTCAATCCTAGGCTTG+AGG + chr4_2:56431536-56431555 Msa0609080:intron 45.0%
GAGTTCAATCCTAGGCTTGA+GGG + chr4_2:56431537-56431556 Msa0609080:intron 45.0%
GCTTGAGGGACTGTTGTTAT+TGG + chr4_2:56431551-56431570 Msa0609080:intron 45.0%
!! GATGTCTAGTCTTGTGCATG+AGG + chr4_2:56431599-56431618 Msa0609080:intron 45.0%
! GGTCATGTCTCTAGTCGTTT+TGG - chr4_2:56431640-56431659 None:intergenic 45.0%
ACTTCGTCTTACAAGTGCTC+TGG + chr4_2:56431950-56431969 Msa0609080:intron 45.0%
TAGTATGTGAGGGGTAACCT+TGG + chr4_2:56432058-56432077 Msa0609080:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr4_2:56432094-56432113 Msa0609080:intron 45.0%
CGTACAATGGACCAAATGGT+GGG + chr4_2:56432171-56432190 Msa0609080:intron 45.0%
TTCTCTGTTGGAGTTCCATG+AGG + chr4_2:56432269-56432288 Msa0609080:intron 45.0%
TACATTGAGCTGACACCTCA+TGG - chr4_2:56432287-56432306 None:intergenic 45.0%
GACCTTGTAACCTTGAGAGA+TGG + chr4_2:56432314-56432333 Msa0609080:intron 45.0%
CTCCATCTCTCAAGGTTACA+AGG - chr4_2:56432319-56432338 None:intergenic 45.0%
GTGCCCTACAATTAGAGACA+TGG - chr4_2:56432559-56432578 None:intergenic 45.0%
GTGTATGGTTATAGACGCCA+TGG - chr4_2:56432585-56432604 None:intergenic 45.0%
TACCACAAATGAAAGCTGGC+AGG + chr4_2:56432619-56432638 Msa0609080:CDS 45.0%
TACCTGCCAGCTTTCATTTG+TGG - chr4_2:56432624-56432643 None:intergenic 45.0%
! TGTAAATCTTAAGGAGGCGC+GGG + chr4_2:56432722-56432741 Msa0609080:CDS 45.0%
! ATGTTCACGGATGCTACTTC+AGG + chr4_2:56433052-56433071 Msa0609080:CDS 45.0%
TTGCACCATCATCATCTCTC+AGG - chr4_2:56433099-56433118 None:intergenic 45.0%
GACCTGGTTCACTTAATGCA+GGG - chr4_2:56433360-56433379 None:intergenic 45.0%
TGACCTGGTTCACTTAATGC+AGG - chr4_2:56433361-56433380 None:intergenic 45.0%
AACAAGCTCCTTTACTGACC+TGG - chr4_2:56433376-56433395 None:intergenic 45.0%
TAAGGCACAGATGTAACCAG+AGG + chr4_2:56433427-56433446 Msa0609080:intron 45.0%
TAGCAATCTACTGAAGCTGC+TGG + chr4_2:56433664-56433683 Msa0609080:intron 45.0%
AGCAATCTACTGAAGCTGCT+GGG + chr4_2:56433665-56433684 Msa0609080:intron 45.0%
ATGTTTACACCAGCTTGAGG+GGG - chr4_2:56434065-56434084 None:intergenic 45.0%
TCTACAATCTGTTGGGTGGT+TGG + chr4_2:56434143-56434162 Msa0609080:intron 45.0%
TGTTGGGTGGTTGGAACAAA+TGG + chr4_2:56434152-56434171 Msa0609080:intron 45.0%
TGAGAAGCTTGAAGAGAGAG+TGG - chr4_2:56434186-56434205 None:intergenic 45.0%
CTGTACGGTCATGCAAAGTT+TGG + chr4_2:56434237-56434256 Msa0609080:intron 45.0%
!! GCAGCCTTGTTGTCACAATA+TGG + chr4_2:56434279-56434298 Msa0609080:intron 45.0%
GCAGCCATATTGTGACAACA+AGG - chr4_2:56434286-56434305 None:intergenic 45.0%
!!! ATCTTTTTGAGGTGCTGGGT+TGG + chr4_2:56434484-56434503 Msa0609080:intron 45.0%
! GACTATTAGAGCATCCACAG+TGG - chr4_2:56434604-56434623 None:intergenic 45.0%
ATCATTTGGCATCACCTTGC+AGG + chr4_2:56434683-56434702 Msa0609080:intron 45.0%
TCATTTGGCATCACCTTGCA+GGG + chr4_2:56434684-56434703 Msa0609080:intron 45.0%
!!! GCAGTCCCTCTTTTTTTCTC+GGG + chr4_2:56434727-56434746 Msa0609080:CDS 45.0%
ATTCCCACCCGAACTAAACA+AGG + chr4_2:56435004-56435023 Msa0609080:intron 45.0%
! GTTACCTTGTTTAGTTCGGG+TGG - chr4_2:56435011-56435030 None:intergenic 45.0%
ACACGGGACATATAAGCCAA+TGG - chr4_2:56435259-56435278 None:intergenic 45.0%
TTGGCTTATATGTCCCGTGT+TGG + chr4_2:56435259-56435278 Msa0609080:intron 45.0%
!! TTTTCCTTGTCTGGGAGCAT+TGG - chr4_2:56435437-56435456 None:intergenic 45.0%
CTAAGAGGATCTACCTTCAC+TGG - chr4_2:56435535-56435554 None:intergenic 45.0%
GAGATGGAAAGCTCCTTCTA+CGG + chr4_2:56435743-56435762 Msa0609080:intron 45.0%
CTGTTGGGAGCCTGATAATA+TGG - chr4_2:56435914-56435933 None:intergenic 45.0%
GCTGCACTAATGTACATGGA+GGG - chr4_2:56436193-56436212 None:intergenic 45.0%
GATGGCTGCACTAATGTACA+TGG - chr4_2:56436197-56436216 None:intergenic 45.0%
TACATTAGTGCAGCCATCGA+TGG + chr4_2:56436199-56436218 Msa0609080:CDS 45.0%
TGTGTGACAGATTCCATCGA+TGG - chr4_2:56436215-56436234 None:intergenic 45.0%
!!! GCTTTTCAAGTGCCGGATTT+TGG + chr4_2:56436239-56436258 Msa0609080:CDS 45.0%
ATGATGTGGCAACATCTGAC+TGG + chr4_2:56436365-56436384 Msa0609080:intron 45.0%
! GCAACATCTGACTGGTTGTA+TGG + chr4_2:56436373-56436392 Msa0609080:intron 45.0%
CTCCTAGAGGATATATTGGC+GGG - chr4_2:56436528-56436547 None:intergenic 45.0%
ACAGCAGTGGCAATTGATTG+TGG + chr4_2:56436549-56436568 Msa0609080:CDS 45.0%
! TGGAGAAGGCATGATCTGAA+GGG - chr4_2:56436599-56436618 None:intergenic 45.0%
ACTGTTTGAGAAGCAAGGGA+TGG - chr4_2:56436628-56436647 None:intergenic 45.0%
AGCAGGATTCTTCATGGAGA+TGG - chr4_2:56436774-56436793 None:intergenic 45.0%
TCCATGAAGAATCCTGCTTG+AGG + chr4_2:56436776-56436795 Msa0609080:CDS 45.0%
TCCTCAAGCAGGATTCTTCA+TGG - chr4_2:56436780-56436799 None:intergenic 45.0%
GAAGGATGATATCCTCAAGC+AGG - chr4_2:56436791-56436810 None:intergenic 45.0%
TCCTTTGGATAAGGCCCAAT+TGG + chr4_2:56436906-56436925 Msa0609080:CDS 45.0%
! TCCAATTGGGCCTTATCCAA+AGG - chr4_2:56436910-56436929 None:intergenic 45.0%
! TTCTTCTGGCTGGCATCAAT+TGG - chr4_2:56437089-56437108 None:intergenic 45.0%
TAGAGTAAGGTGGGATGTTC+TGG - chr4_2:56437120-56437139 None:intergenic 45.0%
ATTTGGGCGTCAGAATTCTC+TGG + chr4_2:56437163-56437182 Msa0609080:three_prime_UTR 45.0%
TTTGGGCGTCAGAATTCTCT+GGG + chr4_2:56437164-56437183 Msa0609080:three_prime_UTR 45.0%
GTAGCTATGGTAACTGCTGA+CGG + chr4_2:56437239-56437258 Msa0609080:three_prime_UTR 45.0%
GGAGGAGGAACCTTTAACAA+TGG - chr4_2:56437269-56437288 None:intergenic 45.0%
GGAAAGAAATGAAGGACGCT+AGG + chr4_2:56437423-56437442 Msa0609080:three_prime_UTR 45.0%
AAACTTACAGCAGCGTCACT+AGG - chr4_2:56437485-56437504 None:intergenic 45.0%
TCTCCGACAAACTGAACTAG+AGG - chr4_2:56437569-56437588 None:intergenic 45.0%
AATGCCACTCATAGAACCCT+TGG + chr4_2:56437602-56437621 Msa0609080:three_prime_UTR 45.0%
CAGAAAACAGCTGTCAGTTG+AGG - chr4_2:56437769-56437788 None:intergenic 45.0%
!! CTCAACTGACAGCTGTTTTC+TGG + chr4_2:56437767-56437786 Msa0609080:three_prime_UTR 45.0%
ATATCTGGTGTTCGTCTTGG+TGG + chr4_2:56437919-56437938 Msa0609080:three_prime_UTR 45.0%
TATTCCAACCCGATGTAGGA+GGG - chr4_2:56437965-56437984 None:intergenic 45.0%
CAAGTATTCCAACCCGATGT+AGG - chr4_2:56437969-56437988 None:intergenic 45.0%
!! CTACATCGGGTTGGAATACT+TGG + chr4_2:56437967-56437986 Msa0609080:three_prime_UTR 45.0%
CAGGGAAGGGTCTTTCTATA+GGG + chr4_2:56438004-56438023 Msa0609080:three_prime_UTR 45.0%
!! AACACCGGCTTCAGTAAATG+AGG - chr4_2:56438117-56438136 None:intergenic 45.0%
TGTGTGTGTGTAGCAAACAC+CGG - chr4_2:56438132-56438151 None:intergenic 45.0%
CTTCTTCAAGTGCGGAAAAC+TGG - chr4_2:56438281-56438300 None:intergenic 45.0%
! TTGTCTGGCTTCTTCAAGTG+CGG - chr4_2:56438289-56438308 None:intergenic 45.0%
CTTGAAGAAGCCAGACAATG+TGG + chr4_2:56438291-56438310 Msa0609080:three_prime_UTR 45.0%
! GACTGGTTGTTTGCTCTTGA+AGG + chr4_2:56438334-56438353 Msa0609080:three_prime_UTR 45.0%
! AGATGGTGGTTCTCTAGTCA+AGG + chr4_2:56438376-56438395 Msa0609080:three_prime_UTR 45.0%
GAGACATAGGTAGAGAACAG+AGG + chr4_2:56438398-56438417 Msa0609080:three_prime_UTR 45.0%
! TAGGTAGAGAACAGAGGTGT+TGG + chr4_2:56438404-56438423 Msa0609080:three_prime_UTR 45.0%
AGCTAGAAGTAGCCCAAAGA+AGG + chr4_2:56438456-56438475 Msa0609080:three_prime_UTR 45.0%
AGTAGCCCAAAGAAGGTTAC+AGG + chr4_2:56438463-56438482 Msa0609080:three_prime_UTR 45.0%
TGCCACCTGTAACCTTCTTT+GGG - chr4_2:56438471-56438490 None:intergenic 45.0%
TTGCCACCTGTAACCTTCTT+TGG - chr4_2:56438472-56438491 None:intergenic 45.0%
AAAGAAGGTTACAGGTGGCA+AGG + chr4_2:56438471-56438490 Msa0609080:three_prime_UTR 45.0%
! TGTGTGCGTAAGTTGCTTTC+TGG + chr4_2:56438576-56438595 Msa0609080:three_prime_UTR 45.0%
TATCTCAAGTTTGCATCCCG+GGG - chr4_2:56439084-56439103 None:intergenic 45.0%
TTGCCCATGACATGGGAATA+TGG + chr4_2:56439223-56439242 Msa0609080:three_prime_UTR 45.0%
AGAACTGACTGATGCAGTTC+AGG + chr4_2:56439600-56439619 Msa0609080:three_prime_UTR 45.0%
GAACTGACTGATGCAGTTCA+GGG + chr4_2:56439601-56439620 Msa0609080:three_prime_UTR 45.0%
ACTGATGCAGTTCAGGGAAT+CGG + chr4_2:56439607-56439626 Msa0609080:three_prime_UTR 45.0%
TAGGTTTCCCACTTCCCAAT+CGG - chr4_2:56439683-56439702 None:intergenic 45.0%
TACAACAGCCTCAATCTGCA+AGG - chr4_2:56439803-56439822 None:intergenic 45.0%
GATTGAGGCTGTTGTAACCA+AGG + chr4_2:56439807-56439826 Msa0609080:intron 45.0%
TTCTGTCAGCCAGTCTGTAA+TGG + chr4_2:56439924-56439943 Msa0609080:three_prime_UTR 45.0%
CTAGCTGATCCATTACAGAC+TGG - chr4_2:56439936-56439955 None:intergenic 45.0%
!! CAGTCTGTAATGGATCAGCT+AGG + chr4_2:56439934-56439953 Msa0609080:three_prime_UTR 45.0%
!! GAGCGATTTGACTTGGTTCA+TGG - chr4_2:56440182-56440201 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr4_2:56440281-56440300 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr4_2:56440284-56440303 None:intergenic 45.0%
GTTGTTGTCATGTGACTGGA+AGG - chr4_2:56432094-56432113 None:intergenic 45.0%
GACGTGAAGAAGTCTATTGG+AGG + chr4_2:56440410-56440429 Msa0609080:intron 45.0%
! TCATGATTTGCAGGGAGTGA+AGG + chr4_2:56440735-56440754 Msa0609080:intron 45.0%
CCATCTATGCTGAGTTTCTC+CGG - chr4_2:56440780-56440799 None:intergenic 45.0%
! TAGATGGTAGTGTTAGCAGC+AGG + chr4_2:56440793-56440812 Msa0609080:three_prime_UTR 45.0%
! AGATGGTAGTGTTAGCAGCA+GGG + chr4_2:56440794-56440813 Msa0609080:three_prime_UTR 45.0%
TTTGCTTGAGGAAGTGGTTG+TGG + chr4_2:56440881-56440900 Msa0609080:three_prime_UTR 45.0%
!! AACAACGTCAAGGTGCTGAA+GGG - chr4_2:56440961-56440980 None:intergenic 45.0%
!! TAACAACGTCAAGGTGCTGA+AGG - chr4_2:56440962-56440981 None:intergenic 45.0%
AAGACTTCACCTCCTGTAAC+TGG + chr4_2:56441045-56441064 Msa0609080:three_prime_UTR 45.0%
GTTAGGCAGAAATAAGGGCT+AGG + chr4_2:56441146-56441165 Msa0609080:three_prime_UTR 45.0%
!!! ATATTTTTTTAAAACAAATT+GGG - chr4_2:56432413-56432432 None:intergenic 5.0%
!! GGTACTGGTTAATCGGGTTC+GGG - chr4_2:56428851-56428870 None:intergenic 50.0%
! TAGCTTCGGGGTGTTTGGTT+CGG - chr4_2:56428949-56428968 None:intergenic 50.0%
AACCAAACACCCCGAAGCTA+AGG + chr4_2:56428949-56428968 Msa0609080:five_prime_UTR 50.0%
! TACCTTAGCTTCGGGGTGTT+TGG - chr4_2:56428954-56428973 None:intergenic 50.0%
AACACCCCGAAGCTAAGGTA+TGG + chr4_2:56428954-56428973 Msa0609080:exon 50.0%
GATGCATTGCATTCCAGCGT+TGG + chr4_2:56429197-56429216 Msa0609080:CDS 50.0%
CTCACTGACGGTAGCTACAA+AGG - chr4_2:56429860-56429879 None:intergenic 50.0%
TCTTGCGATTACTGGGTGTG+AGG + chr4_2:56429991-56430010 Msa0609080:intron 50.0%
CTTGCGATTACTGGGTGTGA+GGG + chr4_2:56429992-56430011 Msa0609080:intron 50.0%
ACCTTCAAGTGCTTCTGCCA+AGG + chr4_2:56430097-56430116 Msa0609080:CDS 50.0%
CCTTCAAGTGCTTCTGCCAA+GGG + chr4_2:56430098-56430117 Msa0609080:CDS 50.0%
GCTTGAGCAATCATCAGCTC+TGG + chr4_2:56430475-56430494 Msa0609080:intron 50.0%
!!! AGCTCTGGAGCTAGCTTTTG+AGG + chr4_2:56430490-56430509 Msa0609080:intron 50.0%
!! GGGTGTTGAAAGTGAGTTGG+AGG - chr4_2:56431356-56431375 None:intergenic 50.0%
AACAACAGTCCCTCAAGCCT+AGG - chr4_2:56431549-56431568 None:intergenic 50.0%
!! GTCTAGTCTTGTGCATGAGG+AGG + chr4_2:56431602-56431621 Msa0609080:intron 50.0%
GGCAACCTTCAGATTGCAGA+TGG + chr4_2:56431846-56431865 Msa0609080:intron 50.0%
! ATGGTAGTGCTCGTCTCCAA+GGG + chr4_2:56431913-56431932 Msa0609080:CDS 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr4_2:56432100-56432119 Msa0609080:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr4_2:56432101-56432120 Msa0609080:intron 50.0%
GCTGCGTACAATGGACCAAA+TGG + chr4_2:56432167-56432186 Msa0609080:intron 50.0%
GCGTACAATGGACCAAATGG+TGG + chr4_2:56432170-56432189 Msa0609080:intron 50.0%
! TAATTGTAGGGCACCACCCA+TGG + chr4_2:56432565-56432584 Msa0609080:intron 50.0%
ATGGTTATAGACGCCATGGG+TGG - chr4_2:56432581-56432600 None:intergenic 50.0%
GCCTCATCCTGACATGTTCA+CGG + chr4_2:56433039-56433058 Msa0609080:CDS 50.0%
TCCGTGAACATGTCAGGATG+AGG - chr4_2:56433043-56433062 None:intergenic 50.0%
GTAGCATCCGTGAACATGTC+AGG - chr4_2:56433049-56433068 None:intergenic 50.0%
ACTTCAGGCAGCTCTCAAGT+AGG + chr4_2:56433067-56433086 Msa0609080:CDS 50.0%
! GGAGGCGAGCGTTTTATAGA+AGG + chr4_2:56433133-56433152 Msa0609080:CDS 50.0%
TGCCCTGCATTAAGTGAACC+AGG + chr4_2:56433355-56433374 Msa0609080:CDS 50.0%
GCACTTCTCCGCTTTATGAC+AGG + chr4_2:56433478-56433497 Msa0609080:CDS 50.0%
TGTAGATTTCAAGGCCCAGC+AGG + chr4_2:56433528-56433547 Msa0609080:CDS 50.0%
GAGGCGATATGAAACCTGCT+GGG - chr4_2:56433545-56433564 None:intergenic 50.0%
AGAGGCGATATGAAACCTGC+TGG - chr4_2:56433546-56433565 None:intergenic 50.0%
!! GAGAGTGAGAGCATCCACAA+TGG - chr4_2:56434401-56434420 None:intergenic 50.0%
GGAAAGGACGAAAGAGAGCA+AGG + chr4_2:56434844-56434863 Msa0609080:intron 50.0%
AAGGACGAAAGAGAGCAAGG+AGG + chr4_2:56434847-56434866 Msa0609080:intron 50.0%
CGGGTGGGAATCATATGTAG+TGG - chr4_2:56434995-56435014 None:intergenic 50.0%
AAGACCAATGCTCCCAGACA+AGG + chr4_2:56435430-56435449 Msa0609080:intron 50.0%
GGAAAATTCGTATGGCCCCA+AGG + chr4_2:56435451-56435470 Msa0609080:intron 50.0%
GTAGAGGTGGGGAAGGATAT+GGG - chr4_2:56435501-56435520 None:intergenic 50.0%
TGTAGAGGTGGGGAAGGATA+TGG - chr4_2:56435502-56435521 None:intergenic 50.0%
TTGAACTGTAGAGGTGGGGA+AGG - chr4_2:56435508-56435527 None:intergenic 50.0%
!! TTCAGAAAGACTGGCCTGCA+TGG - chr4_2:56435963-56435982 None:intergenic 50.0%
ATGCAGGCCAGTCTTTCTGA+AGG + chr4_2:56435962-56435981 Msa0609080:intron 50.0%
GGCTGCACTAATGTACATGG+AGG - chr4_2:56436194-56436213 None:intergenic 50.0%
! GCTTCTAGCTGCCAAAAGGA+AGG - chr4_2:56436500-56436519 None:intergenic 50.0%
TGCCCGCCAATATATCCTCT+AGG + chr4_2:56436523-56436542 Msa0609080:CDS 50.0%
! ATCCTCTAGGAGAACAGCAG+TGG + chr4_2:56436536-56436555 Msa0609080:CDS 50.0%
AGGGCGTGGATGCATATTAG+AGG - chr4_2:56436580-56436599 None:intergenic 50.0%
! GTGGAGAAGGCATGATCTGA+AGG - chr4_2:56436600-56436619 None:intergenic 50.0%
GTTTGAGAAGCAAGGGATGG+TGG - chr4_2:56436625-56436644 None:intergenic 50.0%
ATCCTGCTTGCTTCTGTCTC+TGG + chr4_2:56437054-56437073 Msa0609080:three_prime_UTR 50.0%
TCCTGCTTGCTTCTGTCTCT+GGG + chr4_2:56437055-56437074 Msa0609080:three_prime_UTR 50.0%
TTGATGCCAGCCAGAAGAAG+TGG + chr4_2:56437090-56437109 Msa0609080:three_prime_UTR 50.0%
TGATGCCAGCCAGAAGAAGT+GGG + chr4_2:56437091-56437110 Msa0609080:three_prime_UTR 50.0%
!! AATTCTCTGGGATGGACTGC+TGG + chr4_2:56437176-56437195 Msa0609080:three_prime_UTR 50.0%
TGACGGCAGCCCATTGTTAA+AGG + chr4_2:56437256-56437275 Msa0609080:three_prime_UTR 50.0%
GTTAAAGGTTCCTCCTCCTG+CGG + chr4_2:56437271-56437290 Msa0609080:three_prime_UTR 50.0%
TTAAAGGTTCCTCCTCCTGC+GGG + chr4_2:56437272-56437291 Msa0609080:three_prime_UTR 50.0%
TCCTCCTGCGGGTATTATGA+GGG + chr4_2:56437283-56437302 Msa0609080:three_prime_UTR 50.0%
CTGCGGGTATTATGAGGGTT+GGG + chr4_2:56437288-56437307 Msa0609080:three_prime_UTR 50.0%
TGCGGGTATTATGAGGGTTG+GGG + chr4_2:56437289-56437308 Msa0609080:three_prime_UTR 50.0%
ACCACCAAGGGTTCTATGAG+TGG - chr4_2:56437609-56437628 None:intergenic 50.0%
AACACTCTCCCAGCGTAAAG+TGG - chr4_2:56437648-56437667 None:intergenic 50.0%
!! GAGTGTTGAGATAGACTGCG+TGG + chr4_2:56437661-56437680 Msa0609080:three_prime_UTR 50.0%
GATAGACTGCGTGGATTCTG+AGG + chr4_2:56437670-56437689 Msa0609080:three_prime_UTR 50.0%
!! CGTGGATTCTGAGGAGCATT+TGG + chr4_2:56437679-56437698 Msa0609080:three_prime_UTR 50.0%
!! ACTGACAGCTGTTTTCTGGG+TGG + chr4_2:56437771-56437790 Msa0609080:three_prime_UTR 50.0%
GTATTCCAACCCGATGTAGG+AGG - chr4_2:56437966-56437985 None:intergenic 50.0%
GTTGGAATACTTGGGCCTGA+TGG + chr4_2:56437976-56437995 Msa0609080:three_prime_UTR 50.0%
CCTATAGAAAGACCCTTCCC+TGG - chr4_2:56438006-56438025 None:intergenic 50.0%
CCAGGGAAGGGTCTTTCTAT+AGG + chr4_2:56438003-56438022 Msa0609080:three_prime_UTR 50.0%
AGCCCAAAGAAGGTTACAGG+TGG + chr4_2:56438466-56438485 Msa0609080:three_prime_UTR 50.0%
ATCTCGTCTTGCCCATGACA+TGG + chr4_2:56439215-56439234 Msa0609080:three_prime_UTR 50.0%
TCTCGTCTTGCCCATGACAT+GGG + chr4_2:56439216-56439235 Msa0609080:three_prime_UTR 50.0%
ACAGGCCGTGTCTAAACAAC+AGG - chr4_2:56439464-56439483 None:intergenic 50.0%
CCAATCGGCCCTTTCATCAT+CGG - chr4_2:56439668-56439687 None:intergenic 50.0%
CGATGATGAAAGGGCCGATT+GGG + chr4_2:56439666-56439685 Msa0609080:three_prime_UTR 50.0%
! ATGCGAGAGCTTTAGTGCAC+CGG - chr4_2:56440236-56440255 None:intergenic 50.0%
ACTAAAGCTCTCGCATACGC+AGG + chr4_2:56440240-56440259 Msa0609080:intron 50.0%
CTAAAGCTCTCGCATACGCA+GGG + chr4_2:56440241-56440260 Msa0609080:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG - chr4_2:56432101-56432120 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - chr4_2:56432100-56432119 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+TGG + chr4_2:56440377-56440396 Msa0609080:intron 50.0%
TCACGTCTGAAGGGTAACCA+TGG - chr4_2:56440397-56440416 None:intergenic 50.0%
CCGGAGAAACTCAGCATAGA+TGG + chr4_2:56440777-56440796 Msa0609080:three_prime_UTR 50.0%
! GATGGTAGTGTTAGCAGCAG+GGG + chr4_2:56440795-56440814 Msa0609080:three_prime_UTR 50.0%
GGAAGTGGTTGTGGATTCAC+AGG + chr4_2:56440890-56440909 Msa0609080:three_prime_UTR 50.0%
GAAGAACAGTGTGTGGAGGC+GGG - chr4_2:56428727-56428746 None:intergenic 55.0%
GGAAGAACAGTGTGTGGAGG+CGG - chr4_2:56428728-56428747 None:intergenic 55.0%
GCCTCCACACACTGTTCTTC+CGG + chr4_2:56428727-56428746 Msa0609080:five_prime_UTR 55.0%
TTCGCGGCAAAATCACGTGC+CGG - chr4_2:56428749-56428768 None:intergenic 55.0%
! AGAGGGGTGTGTGGGTTGTT+TGG - chr4_2:56428774-56428793 None:intergenic 55.0%
! GGGAAAACAGAGGGGTGTGT+GGG - chr4_2:56428782-56428801 None:intergenic 55.0%
! AGGGAAAACAGAGGGGTGTG+TGG - chr4_2:56428783-56428802 None:intergenic 55.0%
GTGGTGACATTGAGTGCAGG+CGG - chr4_2:56429227-56429246 None:intergenic 55.0%
TACCTGGTTGGAGTCTCAGG+TGG - chr4_2:56429959-56429978 None:intergenic 55.0%
CACTACCTGGTTGGAGTCTC+AGG - chr4_2:56429962-56429981 None:intergenic 55.0%
!! GGCAGAAGCACTTGAAGGTG+TGG - chr4_2:56430096-56430115 None:intergenic 55.0%
!! CCCTTGGCAGAAGCACTTGA+AGG - chr4_2:56430101-56430120 None:intergenic 55.0%
AGTGCTTCTGCCAAGGGTAG+CGG + chr4_2:56430104-56430123 Msa0609080:CDS 55.0%
!! GGGGGGTGTTGAAAGTGAGT+TGG - chr4_2:56431359-56431378 None:intergenic 55.0%
TTCAACACCCCCCACTCCAA+TGG + chr4_2:56431366-56431385 Msa0609080:intron 55.0%
! CATGGTAGTGCTCGTCTCCA+AGG + chr4_2:56431912-56431931 Msa0609080:CDS 55.0%
! TGGTAGTGCTCGTCTCCAAG+GGG + chr4_2:56431914-56431933 Msa0609080:CDS 55.0%
GTTACCATGTTGCTGCCCCT+TGG - chr4_2:56431932-56431951 None:intergenic 55.0%
CAACTTCACCAGTTGCGCCA+AGG - chr4_2:56432078-56432097 None:intergenic 55.0%
AAGGTCACGGGTTCAACTCC+TGG + chr4_2:56432113-56432132 Msa0609080:intron 55.0%
CAGGGTAAGGCTGCGTACAA+TGG + chr4_2:56432158-56432177 Msa0609080:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr4_2:56432210-56432229 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr4_2:56432211-56432230 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr4_2:56432215-56432234 Msa0609080:intron 55.0%
AACTGAACCTCGAGCCCAAG+TGG - chr4_2:56433316-56433335 None:intergenic 55.0%
ATCTACACTCCCCCTCAAGC+TGG + chr4_2:56434053-56434072 Msa0609080:intron 55.0%
!! AGGTGCTGGGTTGGAGAGAA+TGG + chr4_2:56434493-56434512 Msa0609080:intron 55.0%
GAGACCCACTTAAGCACCCA+AGG + chr4_2:56434569-56434588 Msa0609080:intron 55.0%
ACCCACTTAAGCACCCAAGG+CGG + chr4_2:56434572-56434591 Msa0609080:intron 55.0%
TGCCACTGCTGTTCTCCTAG+AGG - chr4_2:56436541-56436560 None:intergenic 55.0%
AAGGCATGATCTGAAGGGCG+TGG - chr4_2:56436594-56436613 None:intergenic 55.0%
!! AGGGATGGTGGAAGTGGAGA+AGG - chr4_2:56436613-56436632 None:intergenic 55.0%
!! GAAGCAAGGGATGGTGGAAG+TGG - chr4_2:56436619-56436638 None:intergenic 55.0%
AGCAAGCAGGATCGTTCTCC+AGG - chr4_2:56437046-56437065 None:intergenic 55.0%
TCCCAGAGACAGAAGCAAGC+AGG - chr4_2:56437059-56437078 None:intergenic 55.0%
TTCTGGCAGCCCACTTCTTC+TGG - chr4_2:56437103-56437122 None:intergenic 55.0%
! GGCGTCAGAATTCTCTGGGA+TGG + chr4_2:56437168-56437187 Msa0609080:three_prime_UTR 55.0%
!! TGGGATGGACTGCTGGATTG+TGG + chr4_2:56437183-56437202 Msa0609080:three_prime_UTR 55.0%
CTCATAATACCCGCAGGAGG+AGG - chr4_2:56437284-56437303 None:intergenic 55.0%
CTCCTCCTGCGGGTATTATG+AGG + chr4_2:56437282-56437301 Msa0609080:three_prime_UTR 55.0%
ACCCTCATAATACCCGCAGG+AGG - chr4_2:56437287-56437306 None:intergenic 55.0%
CCAACCCTCATAATACCCGC+AGG - chr4_2:56437290-56437309 None:intergenic 55.0%
CCTGCGGGTATTATGAGGGT+TGG + chr4_2:56437287-56437306 Msa0609080:three_prime_UTR 55.0%
GCCACTCATAGAACCCTTGG+TGG + chr4_2:56437605-56437624 Msa0609080:three_prime_UTR 55.0%
TCTGGTGTTCGTCTTGGTGG+TGG + chr4_2:56437922-56437941 Msa0609080:three_prime_UTR 55.0%
ACGCTGAAGCCCTCCTACAT+CGG + chr4_2:56437953-56437972 Msa0609080:three_prime_UTR 55.0%
GGAATACTTGGGCCTGATGG+CGG + chr4_2:56437979-56437998 Msa0609080:three_prime_UTR 55.0%
GTGGGAGGAAGATGCGCAAA+AGG - chr4_2:56439277-56439296 None:intergenic 55.0%
TCAGGGAATCGGCCTTGAAG+TGG + chr4_2:56439618-56439637 Msa0609080:three_prime_UTR 55.0%
CCGATGATGAAAGGGCCGAT+TGG + chr4_2:56439665-56439684 Msa0609080:three_prime_UTR 55.0%
TGAAAGGGCCGATTGGGAAG+TGG + chr4_2:56439672-56439691 Msa0609080:three_prime_UTR 55.0%
GAAAGGGCCGATTGGGAAGT+GGG + chr4_2:56439673-56439692 Msa0609080:three_prime_UTR 55.0%
!! GAGGTGCTGGAACTCATCCT+TGG - chr4_2:56439827-56439846 None:intergenic 55.0%
TCCATGGGCCGTATAACAGC+TGG + chr4_2:56439874-56439893 Msa0609080:three_prime_UTR 55.0%
TCCAGCTGTTATACGGCCCA+TGG - chr4_2:56439878-56439897 None:intergenic 55.0%
! TGCGAGAGCTTTAGTGCACC+GGG - chr4_2:56440235-56440254 None:intergenic 55.0%
AAGGGTAACCATGGCGCAAC+TGG - chr4_2:56440388-56440407 None:intergenic 55.0%
!! AAGGTGCTGAAGGGAGGACT+CGG - chr4_2:56440952-56440971 None:intergenic 55.0%
!! AACGTCAAGGTGCTGAAGGG+AGG - chr4_2:56440958-56440977 None:intergenic 55.0%
ACACGTGCAGCACGTGGTTG+AGG - chr4_2:56428699-56428718 None:intergenic 60.0%
GCCGGAAGAACAGTGTGTGG+AGG - chr4_2:56428731-56428750 None:intergenic 60.0%
CGTGCCGGAAGAACAGTGTG+TGG - chr4_2:56428734-56428753 None:intergenic 60.0%
GCGGTGGTGACATTGAGTGC+AGG - chr4_2:56429230-56429249 None:intergenic 60.0%
CACCACCTGAGACTCCAACC+AGG + chr4_2:56429954-56429973 Msa0609080:CDS 60.0%
GTGCTTCTGCCAAGGGTAGC+GGG + chr4_2:56430105-56430124 Msa0609080:CDS 60.0%
!! TCTGCCAAGGGTAGCGGGTA+CGG + chr4_2:56430110-56430129 Msa0609080:CDS 60.0%
CGGGTACGGCTTCGCTGATA+AGG + chr4_2:56430124-56430143 Msa0609080:CDS 60.0%
CTGTCCCTCACTCTCCCTGT+CGG + chr4_2:56431233-56431252 Msa0609080:intron 60.0%
CTCTCCGACAGGGAGAGTGA+GGG - chr4_2:56431240-56431259 None:intergenic 60.0%
ACTCTCCGACAGGGAGAGTG+AGG - chr4_2:56431241-56431260 None:intergenic 60.0%
GTGCAGCTCACTCTCCGACA+GGG - chr4_2:56431250-56431269 None:intergenic 60.0%
GCGACGCGATTGCTTGATCC+AGG - chr4_2:56431276-56431295 None:intergenic 60.0%
GTCTCCAAGGGGCAGCAACA+TGG + chr4_2:56431925-56431944 Msa0609080:CDS 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr4_2:56432067-56432086 Msa0609080:intron 60.0%
CATACGCAGGGTTCGGGAAG+GGG - chr4_2:56432198-56432217 None:intergenic 60.0%
GCATACGCAGGGTTCGGGAA+GGG - chr4_2:56432199-56432218 None:intergenic 60.0%
CTTCCCGAACCCTGCGTATG+CGG + chr4_2:56432198-56432217 Msa0609080:intron 60.0%
TTCCCGAACCCTGCGTATGC+GGG + chr4_2:56432199-56432218 Msa0609080:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr4_2:56432216-56432235 Msa0609080:intron 60.0%
GAACAGTCCACTTGGGCTCG+AGG + chr4_2:56433306-56433325 Msa0609080:CDS 60.0%
CCCGCCTTGGGTGCTTAAGT+GGG - chr4_2:56434576-56434595 None:intergenic 60.0%
CCCACTTAAGCACCCAAGGC+GGG + chr4_2:56434573-56434592 Msa0609080:intron 60.0%
CCACTTAAGCACCCAAGGCG+GGG + chr4_2:56434574-56434593 Msa0609080:intron 60.0%
GCTCAAGCTGGAACCCTGCA+AGG - chr4_2:56434700-56434719 None:intergenic 60.0%
CGCTGAAGCCCTCCTACATC+GGG + chr4_2:56437954-56437973 Msa0609080:three_prime_UTR 60.0%
GAAGCCCTCCTACATCGGGT+TGG + chr4_2:56437958-56437977 Msa0609080:three_prime_UTR 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr4_2:56432183-56432202 None:intergenic 60.0%
TGTGACTGGAAGGTCACGGG+TGG - chr4_2:56432104-56432123 None:intergenic 60.0%
GAGGAGACACGTGCAGCACG+TGG - chr4_2:56428705-56428724 None:intergenic 65.0%
GAACAGTGTGTGGAGGCGGG+AGG - chr4_2:56428724-56428743 None:intergenic 65.0%
TGCAGGCGGCAATCCAACGC+TGG - chr4_2:56429213-56429232 None:intergenic 65.0%
GAAGCCGTACCCGCTACCCT+TGG - chr4_2:56430117-56430136 None:intergenic 65.0%
CGACAGGGAGAGTGAGGGAC+AGG - chr4_2:56431235-56431254 None:intergenic 65.0%
CGTGCAGCTCACTCTCCGAC+AGG - chr4_2:56431251-56431270 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_2:56440266-56440285 None:intergenic 65.0%
CGCATACGCAGGGTTCGGGA+AGG - chr4_2:56432200-56432219 None:intergenic 65.0%
CTCCCGCATACGCAGGGTTC+GGG - chr4_2:56432204-56432223 None:intergenic 65.0%
GCTCCCGCATACGCAGGGTT+CGG - chr4_2:56432205-56432224 None:intergenic 65.0%
CCCCGCCTTGGGTGCTTAAG+TGG - chr4_2:56434577-56434596 None:intergenic 65.0%
CTTAAGCACCCAAGGCGGGG+AGG + chr4_2:56434577-56434596 Msa0609080:intron 65.0%
ACAGTGGACCTCCCCGCCTT+GGG - chr4_2:56434588-56434607 None:intergenic 65.0%
GGCAGCCCACTTCTTCTGGC+TGG - chr4_2:56437099-56437118 None:intergenic 65.0%
!! TTGGGCCTGATGGCGGTCCA+GGG + chr4_2:56437986-56438005 Msa0609080:three_prime_UTR 65.0%
!! CCTGATGGCGGTCCAGGGAA+GGG + chr4_2:56437991-56438010 Msa0609080:three_prime_UTR 65.0%
GCTCTCGCATACGCAGGGTC+CGG + chr4_2:56440246-56440265 Msa0609080:intron 65.0%
CTCTCGCATACGCAGGGTCC+GGG + chr4_2:56440247-56440266 Msa0609080:intron 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr4_2:56440252-56440271 Msa0609080:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr4_2:56440253-56440272 Msa0609080:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr4_2:56440266-56440285 Msa0609080:intron 65.0%
GAGAGTGAGCTGCACGCGCC+TGG + chr4_2:56431255-56431274 Msa0609080:intron 70.0%
AGCAATCGCGTCGCGCCACG+TGG + chr4_2:56431282-56431301 Msa0609080:intron 70.0%
CGTCGCGCCACGTGGCAGAT+CGG + chr4_2:56431290-56431309 Msa0609080:intron 70.0%
GTCGCGCCACGTGGCAGATC+GGG + chr4_2:56431291-56431310 Msa0609080:intron 70.0%
CACAGTGGACCTCCCCGCCT+TGG - chr4_2:56434589-56434608 None:intergenic 70.0%
CAAGGCGGGGAGGTCCACTG+TGG + chr4_2:56434587-56434606 Msa0609080:intron 70.0%
!! CTTGGGCCTGATGGCGGTCC+AGG + chr4_2:56437985-56438004 Msa0609080:three_prime_UTR 70.0%
!! GCCTGATGGCGGTCCAGGGA+AGG + chr4_2:56437990-56438009 Msa0609080:three_prime_UTR 70.0%
CCCTTCCCTGGACCGCCATC+AGG - chr4_2:56437994-56438013 None:intergenic 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr4_2:56440251-56440270 Msa0609080:intron 70.0%
GCCACGTGGCAGATCGGGCC+AGG + chr4_2:56431296-56431315 Msa0609080:intron 75.0%
GCCTGGCCCGATCTGCCACG+TGG - chr4_2:56431300-56431319 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 56428660 56441331 56428660 ID=Msa0609080;Name=Msa0609080
chr4_2 mRNA 56428660 56441331 56428660 ID=Msa0609080-mRNA-1;Parent=Msa0609080;Name=Msa0609080-mRNA-1;_AED=0.20;_eAED=0.20;_QI=313|1|1|1|1|0.89|19|3302|534
chr4_2 exon 56428660 56429084 56428660 ID=Msa0609080-mRNA-1:exon:14477;Parent=Msa0609080-mRNA-1
chr4_2 exon 56429186 56429274 56429186 ID=Msa0609080-mRNA-1:exon:14478;Parent=Msa0609080-mRNA-1
chr4_2 exon 56429866 56429975 56429866 ID=Msa0609080-mRNA-1:exon:14479;Parent=Msa0609080-mRNA-1
chr4_2 exon 56430091 56430145 56430091 ID=Msa0609080-mRNA-1:exon:14480;Parent=Msa0609080-mRNA-1
chr4_2 exon 56431858 56431946 56431858 ID=Msa0609080-mRNA-1:exon:14481;Parent=Msa0609080-mRNA-1
chr4_2 exon 56432574 56432640 56432574 ID=Msa0609080-mRNA-1:exon:14482;Parent=Msa0609080-mRNA-1
chr4_2 exon 56432720 56432782 56432720 ID=Msa0609080-mRNA-1:exon:14483;Parent=Msa0609080-mRNA-1
chr4_2 exon 56433004 56433174 56433004 ID=Msa0609080-mRNA-1:exon:14484;Parent=Msa0609080-mRNA-1
chr4_2 exon 56433283 56433376 56433283 ID=Msa0609080-mRNA-1:exon:14485;Parent=Msa0609080-mRNA-1
chr4_2 exon 56433470 56433549 56433470 ID=Msa0609080-mRNA-1:exon:14486;Parent=Msa0609080-mRNA-1
chr4_2 exon 56433667 56433742 56433667 ID=Msa0609080-mRNA-1:exon:14487;Parent=Msa0609080-mRNA-1
chr4_2 exon 56434705 56434748 56434705 ID=Msa0609080-mRNA-1:exon:14488;Parent=Msa0609080-mRNA-1
chr4_2 exon 56435968 56436035 56435968 ID=Msa0609080-mRNA-1:exon:14489;Parent=Msa0609080-mRNA-1
chr4_2 exon 56436175 56436260 56436175 ID=Msa0609080-mRNA-1:exon:14490;Parent=Msa0609080-mRNA-1
chr4_2 exon 56436512 56436669 56436512 ID=Msa0609080-mRNA-1:exon:14491;Parent=Msa0609080-mRNA-1
chr4_2 exon 56436769 56438102 56436769 ID=Msa0609080-mRNA-1:exon:14492;Parent=Msa0609080-mRNA-1
chr4_2 exon 56438254 56439723 56438254 ID=Msa0609080-mRNA-1:exon:14493;Parent=Msa0609080-mRNA-1
chr4_2 exon 56439808 56439964 56439808 ID=Msa0609080-mRNA-1:exon:14494;Parent=Msa0609080-mRNA-1
chr4_2 exon 56440748 56441331 56440748 ID=Msa0609080-mRNA-1:exon:14495;Parent=Msa0609080-mRNA-1
chr4_2 five_prime_UTR 56428660 56428972 56428660 ID=Msa0609080-mRNA-1:five_prime_utr;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56428973 56429084 56428973 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56429186 56429274 56429186 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56429866 56429975 56429866 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56430091 56430145 56430091 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56431858 56431946 56431858 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56432574 56432640 56432574 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56432720 56432782 56432720 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56433004 56433174 56433004 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56433283 56433376 56433283 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56433470 56433549 56433470 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56433667 56433742 56433667 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56434705 56434748 56434705 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56435968 56436035 56435968 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56436175 56436260 56436175 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56436512 56436669 56436512 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 CDS 56436769 56437011 56436769 ID=Msa0609080-mRNA-1:cds;Parent=Msa0609080-mRNA-1
chr4_2 three_prime_UTR 56437012 56438102 56437012 ID=Msa0609080-mRNA-1:three_prime_utr;Parent=Msa0609080-mRNA-1
chr4_2 three_prime_UTR 56438254 56439723 56438254 ID=Msa0609080-mRNA-1:three_prime_utr;Parent=Msa0609080-mRNA-1
chr4_2 three_prime_UTR 56439808 56439964 56439808 ID=Msa0609080-mRNA-1:three_prime_utr;Parent=Msa0609080-mRNA-1
chr4_2 three_prime_UTR 56440748 56441331 56440748 ID=Msa0609080-mRNA-1:three_prime_utr;Parent=Msa0609080-mRNA-1
Gene Sequence

>Msa0609080

ATGGAATCAATCCTAGCAAGAGCATTGGAATACACGCTCAAATACTGGCTCAAATCATTCACCAGAGATCAGTTCAAATTACAGGGTCGCACCGTTCAGCTTTCTAATTTAGATATAAACGGTGATGCATTGCATTCCAGCGTTGGATTGCCGCCTGCACTCAATGTCACCACCGCTAAAGTTGGAAAATTGGAGATCAGGCTACCGTCAGTGAGCAATGTACAGACAGAGCCAATCATTGTGCAAATTGATAGGCTTGATTTGGTTCTTGAGGAGAATTCTGATTTTACACCACCTGAGACTCCAACCAGTTCCACACCTTCAAGTGCTTCTGCCAAGGGTAGCGGGTACGGCTTCGCTGATAAGATTGCAGATGGAATGACTATACAGATTCATACAGTTAATCTATTACTTGAAACTCATGGTAGTGCTCGTCTCCAAGGGGCAGCAACATGGGCACCACCCATGGCGTCTATAACCATACACAACCTTTTGCTGTATACCACAAATGAAAGCTGGCAGGTTGTAAATCTTAAGGAGGCGCGGGATTTCTCATCTAATAAGAAGTATATTTATGTCTTCAAAAAATTGGAATGGGAATCATTATCTATTGATCTTTTGCCTCATCCTGACATGTTCACGGATGCTACTTCAGGCAGCTCTCAAGTAGGTTCAAACCTGAGAGATGATGATGGTGCAAAGAGAGTATTCTTTGGAGGCGAGCGTTTTATAGAAGGAATATCAGGAGAAGCACATATCACTGTTCAGAGAACTGAATTGAACAGTCCACTTGGGCTCGAGGTTCAGTTACATGTCACAGAAGCCATTTGCCCTGCATTAAGTGAACCAGGGCTACGTGCACTTCTCCGCTTTATGACAGGAATATATGTTTGTCTAAACAGGGGAAATGTAGATTTCAAGGCCCAGCAGCAATCTACTGAAGCTGCTGGGCGTTCTCTTGTGTCAATTGTTGTGGACCATATATTTCTGTGCATTAAAGATTCTGGGTTCCAGCTTGAGCTTTTAATGCAGTCCCTCTTTTTTTCTCGGGCCAGTCTTTCTGAAGGAGATAACGACAGTAACTTGACCAGGATTACAATTGCAGGACTATTTTTGAGGGATACATTTTCACGCCCTCCATGTACATTAGTGCAGCCATCGATGGAATCTGTCACACAACAAGCTTTTCAAGTGCCGGATTTTGCTAGAAGCTTTTGCCCGCCAATATATCCTCTAGGAGAACAGCAGTGGCAATTGATTGTGGAAACTCCTCTAATATGCATCCACGCCCTTCAGATCATGCCTTCTCCACTTCCACCATCCCTTGCTTCTCAAACAGTTATTGACTGTCAGTCTCTTATGGTCCATCTCCATGAAGAATCCTGCTTGAGGATATCATCCTTCTTAGCTGATGGAATTGTTGTCAATCGTGGTGACATTTTACCAGATTTCTCTGTGAATTCTTTTATTTTCACTCTCAAGGGTTTGGATATTACAGTTCCTTTGGATAAGGCCCAATTGGATTTTTGTGTAAGCAACACGGATGATACAGTTAAATCTTATTTGCTGGAGCAAGGCTACATATTGAAAACCTTTTCGTTTTAG
Protein sequence

>Msa0609080

MESILARALEYTLKYWLKSFTRDQFKLQGRTVQLSNLDINGDALHSSVGLPPALNVTTAKVGKLEIRLPSVSNVQTEPIIVQIDRLDLVLEENSDFTPPETPTSSTPSSASAKGSGYGFADKIADGMTIQIHTVNLLLETHGSARLQGAATWAPPMASITIHNLLLYTTNESWQVVNLKEARDFSSNKKYIYVFKKLEWESLSIDLLPHPDMFTDATSGSSQVGSNLRDDDGAKRVFFGGERFIEGISGEAHITVQRTELNSPLGLEVQLHVTEAICPALSEPGLRALLRFMTGIYVCLNRGNVDFKAQQQSTEAAGRSLVSIVVDHIFLCIKDSGFQLELLMQSLFFSRASLSEGDNDSNLTRITIAGLFLRDTFSRPPCTLVQPSMESVTQQAFQVPDFARSFCPPIYPLGEQQWQLIVETPLICIHALQIMPSPLPPSLASQTVIDCQSLMVHLHEESCLRISSFLADGIVVNRGDILPDFSVNSFIFTLKGLDITVPLDKAQLDFCVSNTDDTVKSYLLEQGYILKTFSF*