Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609750 | XP_013456753.1 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 3.06e-124 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609750 | sp|Q8H1U5|APC2_ARATH | 52.973 | 185 | 80 | 1 | 1 | 185 | 1 | 178 | 3.43e-53 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609750 | A0A072ULX4 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 1.46e-124 | 381 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0057420 | Msa0609750 | 0.818552 | 1.846588e-52 | -8.615850e-47 |
| Msa0609750 | Msa1240770 | 0.800850 | 1.187884e-48 | -8.615850e-47 |
| Msa0380620 | Msa0609750 | 0.805220 | 1.482957e-49 | -8.615850e-47 |
| Msa0430260 | Msa0609750 | 0.801443 | 8.983441e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609750 | MtrunA17_Chr4g0042651 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 2.81e-128 | 381 |
| Msa0609750 | MtrunA17_Chr4g0042591 | 94.652 | 187 | 10 | 0 | 1 | 187 | 1 | 187 | 4.88e-125 | 373 |
| Msa0609750 | MtrunA17_Chr7g0222201 | 74.866 | 187 | 39 | 3 | 1 | 185 | 14 | 194 | 1.24e-85 | 270 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609750 | AT2G04660.1 | 52.973 | 185 | 80 | 1 | 1 | 185 | 1 | 178 | 3.48e-54 | 184 |
Find 236 sgRNAs with CRISPR-Local
Find 537 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAACACTGCAAGATTTA+AGG | 0.110861 | 4_2:-57232786 | Msa0609750:three_prime_UTR |
| GGACAGCATGACGATGATTT+TGG | 0.120787 | 4_2:+57232871 | None:intergenic |
| CCTCTTAAGTAATCCCTTAT+TGG | 0.161441 | 4_2:+57232119 | None:intergenic |
| AACGATTATCTCAAATAATT+TGG | 0.172152 | 4_2:+57232759 | None:intergenic |
| TGTCAACTTGAAGATATTAT+TGG | 0.175525 | 4_2:-57227340 | Msa0609750:three_prime_UTR |
| CTATCATATCTTCTAATTTC+TGG | 0.192152 | 4_2:-57231185 | Msa0609750:three_prime_UTR |
| GAAGAAATTCAAGAGAATTT+TGG | 0.200492 | 4_2:-57231984 | Msa0609750:three_prime_UTR |
| CTAAAGAAGTAGTGAGCTTA+TGG | 0.229658 | 4_2:-57228708 | Msa0609750:three_prime_UTR |
| GGAATGATTGTTGGCATAAT+TGG | 0.254142 | 4_2:-57231727 | Msa0609750:three_prime_UTR |
| AATTGCCTTCGCGGTAAATA+TGG | 0.258971 | 4_2:+57235075 | None:intergenic |
| CCTCTAAGACTTTGAGAAAA+TGG | 0.259142 | 4_2:+57234676 | None:intergenic |
| GGAGAAGTGTCTGTTAATTT+TGG | 0.260716 | 4_2:-57234093 | Msa0609750:CDS |
| TGGAACTGTGGTCATCCTTT+TGG | 0.266605 | 4_2:-57228688 | Msa0609750:three_prime_UTR |
| TGGTTTCTGCTTCCCTTCAA+TGG | 0.267589 | 4_2:+57231769 | None:intergenic |
| CATGCACGGACTGTTCTATT+TGG | 0.270438 | 4_2:+57235135 | None:intergenic |
| GTTTGGTTGAAGACAGAAAA+TGG | 0.284563 | 4_2:+57234986 | None:intergenic |
| TGACCTTGTATACACTATTA+TGG | 0.288428 | 4_2:-57229605 | Msa0609750:three_prime_UTR |
| AAAGACCTTGCAGCTGCTAT+TGG | 0.292801 | 4_2:-57229944 | Msa0609750:three_prime_UTR |
| CATGCCCTTCTTGTCTATCT+TGG | 0.297786 | 4_2:-57232946 | Msa0609750:three_prime_UTR |
| AGGCAGTTGGTGAACCAATA+AGG | 0.300745 | 4_2:-57232133 | Msa0609750:three_prime_UTR |
| GACTGTCTCTTCTGTGCTTA+TGG | 0.305488 | 4_2:-57233979 | Msa0609750:CDS |
| GTGTTTCGATGTTGGGGTTT+TGG | 0.310179 | 4_2:+57234932 | None:intergenic |
| TGTCGATATGCATTCGAAAA+TGG | 0.322014 | 4_2:+57235108 | None:intergenic |
| CAACAGGTTCAGGCAGGTTA+AGG | 0.323856 | 4_2:+57230371 | None:intergenic |
| TGATGATGTATCTCAAAATA+AGG | 0.323949 | 4_2:-57233535 | Msa0609750:three_prime_UTR |
| TGCTTTGGAAGAAATCTCTT+TGG | 0.326554 | 4_2:-57234129 | Msa0609750:CDS |
| GAGAAATGAGATAACATAAA+TGG | 0.329624 | 4_2:-57227464 | Msa0609750:three_prime_UTR |
| CAAGAAGGGCATGGAGAAAC+TGG | 0.330140 | 4_2:+57232956 | None:intergenic |
| TGTTGGAGTGATTTGTCATA+AGG | 0.333266 | 4_2:+57228798 | None:intergenic |
| AGAAGCTTGTCAACAGGTTC+AGG | 0.333610 | 4_2:+57230361 | None:intergenic |
| TACCTTTGGATGTATTAAAT+AGG | 0.336084 | 4_2:-57229919 | Msa0609750:three_prime_UTR |
| GTGGTTTGTGTTTCGATGTT+GGG | 0.341394 | 4_2:+57234925 | None:intergenic |
| GAAATGGGTCATCCAGGTTT+TGG | 0.342378 | 4_2:-57234573 | Msa0609750:CDS |
| TGGAGTTGCAGTTTGAAGAT+AGG | 0.349470 | 4_2:-57230115 | Msa0609750:three_prime_UTR |
| GGCAATGCTCAGGAACTTCT+TGG | 0.357857 | 4_2:-57229544 | Msa0609750:three_prime_UTR |
| ATTATGCTCAATGATCTAAT+TGG | 0.362022 | 4_2:-57231419 | Msa0609750:three_prime_UTR |
| GACAGTCCATTGATACTTAG+AGG | 0.365748 | 4_2:+57233995 | None:intergenic |
| CAGCAGGATCTATCGTCCTT+AGG | 0.366985 | 4_2:+57232168 | None:intergenic |
| GACATGGATTTAGATGAAAA+AGG | 0.367608 | 4_2:-57233510 | Msa0609750:three_prime_UTR |
| TAATTTCTGGCCTCCGATAC+AGG | 0.368371 | 4_2:-57231172 | Msa0609750:intron |
| TTTATGGCAGAAATTTATCT+TGG | 0.376798 | 4_2:-57229011 | Msa0609750:intron |
| TGAGGAGAAGTTAGAACTTC+GGG | 0.382470 | 4_2:-57228745 | Msa0609750:three_prime_UTR |
| CTCTTTGGAGAAACAGTATC+AGG | 0.383970 | 4_2:-57234114 | Msa0609750:CDS |
| CAAAGGAAGGTTGACATACT+TGG | 0.384395 | 4_2:-57231748 | Msa0609750:three_prime_UTR |
| CTGTCTGAATTTGTAGGACT+TGG | 0.384965 | 4_2:-57227277 | Msa0609750:three_prime_UTR |
| ATCTATTCAAAGCTGGATAC+AGG | 0.386253 | 4_2:-57233111 | Msa0609750:intron |
| ATGATAATAGATGCAAGAAC+AGG | 0.388013 | 4_2:+57230071 | None:intergenic |
| CCATGCTTTACAATCTTTCA+AGG | 0.390562 | 4_2:-57234069 | Msa0609750:CDS |
| AGCTGCTATTGGGATACCTT+TGG | 0.393881 | 4_2:-57229933 | Msa0609750:three_prime_UTR |
| TTAGTAGATGAGCATGAGAT+TGG | 0.393991 | 4_2:-57227177 | Msa0609750:three_prime_UTR |
| GGTGTCATTGCAGAGTCGTC+GGG | 0.396157 | 4_2:-57229640 | Msa0609750:three_prime_UTR |
| AACAAAATGCCGCCAAAACC+TGG | 0.399481 | 4_2:+57234561 | None:intergenic |
| CAAGTATGTCAACCTTCCTT+TGG | 0.402337 | 4_2:+57231749 | None:intergenic |
| GGCAGTTGGTGAACCAATAA+GGG | 0.403262 | 4_2:-57232132 | Msa0609750:three_prime_UTR |
| GGTCTTCGCTGAGTTTATCT+AGG | 0.408412 | 4_2:+57234847 | None:intergenic |
| TTATGGCAGAAATTTATCTT+GGG | 0.412611 | 4_2:-57229010 | Msa0609750:intron |
| ATTCTCAGAAAACAGTAAAC+TGG | 0.413392 | 4_2:-57233433 | Msa0609750:three_prime_UTR |
| AGCAGCTGCAAGGTCTTTAG+AGG | 0.414554 | 4_2:+57229949 | None:intergenic |
| TGTCTGAGGTGGCTGACTTA+TGG | 0.416119 | 4_2:+57231364 | None:intergenic |
| GTTGGAGTGATTTGTCATAA+GGG | 0.421083 | 4_2:+57228799 | None:intergenic |
| CAATCTCTTCTCGGCGGTGC+TGG | 0.429156 | 4_2:-57234777 | Msa0609750:CDS |
| AAGACCTTGCAGCTGCTATT+GGG | 0.432206 | 4_2:-57229943 | Msa0609750:three_prime_UTR |
| ACTAAATCTCTTCGCATAAT+CGG | 0.432698 | 4_2:+57230336 | None:intergenic |
| AAAATTGTTAATTGCCTTCG+CGG | 0.439051 | 4_2:+57235066 | None:intergenic |
| GTTCTTGATCTCAGAAGTCT+TGG | 0.439927 | 4_2:-57233390 | Msa0609750:three_prime_UTR |
| GCTTAAAACTTATGGCCAAA+AGG | 0.441534 | 4_2:+57228673 | None:intergenic |
| AACAGGTTCAGGCAGGTTAA+GGG | 0.446902 | 4_2:+57230372 | None:intergenic |
| TTGGGGATGCTCACAAACTT+TGG | 0.447157 | 4_2:-57228992 | Msa0609750:three_prime_UTR |
| GACATACTTGGAATGATTGT+TGG | 0.448809 | 4_2:-57231736 | Msa0609750:three_prime_UTR |
| AAATCATCGTCATGCTGTCC+TGG | 0.449614 | 4_2:-57232868 | Msa0609750:three_prime_UTR |
| AAAAGTTATGTTATATTATG+TGG | 0.452123 | 4_2:-57227241 | Msa0609750:three_prime_UTR |
| TGTGGTTTGTGTTTCGATGT+TGG | 0.455384 | 4_2:+57234924 | None:intergenic |
| AGCAGGATCTATCGTCCTTA+GGG | 0.456615 | 4_2:+57232169 | None:intergenic |
| CCAATAAGGGATTACTTAAG+AGG | 0.456839 | 4_2:-57232119 | Msa0609750:three_prime_UTR |
| TTCAATGGATCTGCTTCTAC+AGG | 0.459480 | 4_2:+57231784 | None:intergenic |
| AAGTCTTGGATTTACTTCAA+TGG | 0.460838 | 4_2:-57233376 | Msa0609750:three_prime_UTR |
| CTTTAATAGTAGAAACGTAT+TGG | 0.463553 | 4_2:+57232192 | None:intergenic |
| GTATTGGTGTAATATATCAT+TGG | 0.463906 | 4_2:+57232208 | None:intergenic |
| CCTCATAGCAATAACACATA+AGG | 0.467284 | 4_2:+57227548 | None:intergenic |
| GGATCTGCTTCTACAGGATC+AGG | 0.468033 | 4_2:+57231790 | None:intergenic |
| TTTGTTGGTTTGAACAAGAA+TGG | 0.472788 | 4_2:-57234526 | Msa0609750:CDS |
| CACCAGCTTTGAATGTTGTC+CGG | 0.474610 | 4_2:+57232283 | None:intergenic |
| TCAAGTGCGTCTGGAAATCC+TGG | 0.476357 | 4_2:-57232038 | Msa0609750:three_prime_UTR |
| AGCTACGAAAGTACTTCATC+AGG | 0.478342 | 4_2:-57232913 | Msa0609750:three_prime_UTR |
| TACCATTAGCTATATTGCAT+TGG | 0.480614 | 4_2:-57233611 | Msa0609750:intron |
| GGAGTTGCAGTTTGAAGATA+GGG | 0.482664 | 4_2:-57230114 | Msa0609750:three_prime_UTR |
| TACCACCTGTCTGAATTTGT+AGG | 0.485285 | 4_2:-57227283 | Msa0609750:three_prime_UTR |
| AGGCGGCAGTGGCAATGCTC+AGG | 0.487470 | 4_2:-57229554 | Msa0609750:three_prime_UTR |
| AGAAGAGGGTATAGCTTTCG+AGG | 0.488631 | 4_2:+57234811 | None:intergenic |
| AGTAGGAATGGAGGCGGCAG+TGG | 0.489096 | 4_2:-57229565 | Msa0609750:three_prime_UTR |
| TTAATGGACAGGTTCTGATC+TGG | 0.491193 | 4_2:-57227628 | Msa0609750:intron |
| TAGGACTTGGTTAGCCTGAA+AGG | 0.493502 | 4_2:-57227264 | Msa0609750:three_prime_UTR |
| ACCTTACCTCTAAGTATCAA+TGG | 0.493728 | 4_2:-57234001 | Msa0609750:CDS |
| CTCAAGACCATGTTTACAAA+GGG | 0.496856 | 4_2:+57234713 | None:intergenic |
| AAACCAACAAAATCAGCATA+AGG | 0.497257 | 4_2:+57234538 | None:intergenic |
| TTTCGAGGATTTCGTGAAGT+TGG | 0.498150 | 4_2:+57234826 | None:intergenic |
| CCTTATGTGTTATTGCTATG+AGG | 0.499162 | 4_2:-57227548 | Msa0609750:three_prime_UTR |
| TCGGAGAGAAGCTTGTCAAC+AGG | 0.499327 | 4_2:+57230355 | None:intergenic |
| TTGAACGAAATGGGTCATCC+AGG | 0.501331 | 4_2:-57234579 | Msa0609750:CDS |
| GAGTGTGCTGTGTAATGCTT+TGG | 0.502770 | 4_2:-57234144 | Msa0609750:CDS |
| CGCGGTAAATATGGACCTAC+GGG | 0.502955 | 4_2:+57235084 | None:intergenic |
| AATTTGCTGATAAACTTTGA+AGG | 0.509965 | 4_2:-57227604 | Msa0609750:three_prime_UTR |
| ACGTACTCTAGAACTCCTTA+AGG | 0.510812 | 4_2:-57231617 | Msa0609750:intron |
| TCTTACAATCTATTCAAAGC+TGG | 0.511851 | 4_2:-57233118 | Msa0609750:three_prime_UTR |
| CGTTATCGCCTTCTTACTGC+AGG | 0.512285 | 4_2:-57232239 | Msa0609750:three_prime_UTR |
| CTCCTATTTAATACATCCAA+AGG | 0.515654 | 4_2:+57229917 | None:intergenic |
| GAAGGAGATGACTGTGTATG+AGG | 0.518178 | 4_2:-57229470 | Msa0609750:intron |
| CAAGTAACAAAATACCTATC+GGG | 0.520343 | 4_2:+57232730 | None:intergenic |
| GCTATGAGGAAACCGACTCT+TGG | 0.520434 | 4_2:-57227534 | Msa0609750:three_prime_UTR |
| CCATGTTGACAGATGGGACT+GGG | 0.526083 | 4_2:-57232067 | Msa0609750:three_prime_UTR |
| CTGAGGAGAAGTTAGAACTT+CGG | 0.527615 | 4_2:-57228746 | Msa0609750:three_prime_UTR |
| TCCATTGATACTTAGAGGTA+AGG | 0.529156 | 4_2:+57234000 | None:intergenic |
| GGCAAAAGTATATGATGTAG+CGG | 0.529475 | 4_2:-57233162 | Msa0609750:three_prime_UTR |
| TGTCCGATGGAAGTTGCGGC+TGG | 0.530148 | 4_2:-57232821 | Msa0609750:three_prime_UTR |
| GGGTGTCATTGCAGAGTCGT+CGG | 0.533810 | 4_2:-57229641 | Msa0609750:three_prime_UTR |
| AAGATAGCAAAAGTGAGCGT+TGG | 0.534589 | 4_2:+57227376 | None:intergenic |
| AACGCCACACAATCTCTTCT+CGG | 0.535228 | 4_2:-57234786 | Msa0609750:CDS |
| CTTTGCCCTCTTAGGTGTGG+AGG | 0.535555 | 4_2:-57231247 | Msa0609750:intron |
| CAACAAACCGCTTACAAACC+AGG | 0.535694 | 4_2:+57233936 | None:intergenic |
| TGGTTTGTGTTTCGATGTTG+GGG | 0.538131 | 4_2:+57234926 | None:intergenic |
| TTCTATTTGGAGATGAGTGA+TGG | 0.539462 | 4_2:+57235148 | None:intergenic |
| GCTTGTCAACAGGTTCAGGC+AGG | 0.541428 | 4_2:+57230365 | None:intergenic |
| GAGTTAAGTACAGTCATGGA+TGG | 0.545785 | 4_2:-57233567 | Msa0609750:three_prime_UTR |
| GTCTTGTCCGATGGAAGTTG+CGG | 0.545950 | 4_2:-57232825 | Msa0609750:three_prime_UTR |
| GAGGAAACCGACTCTTGGCA+TGG | 0.545982 | 4_2:-57227529 | Msa0609750:three_prime_UTR |
| GGAAGACAGATCTGTGGCCT+CGG | 0.546586 | 4_2:-57229509 | Msa0609750:three_prime_UTR |
| CCATCGGACAAGACTTTCAG+AGG | 0.547527 | 4_2:+57232834 | None:intergenic |
| AGTCACCAAGATAGACAAGA+AGG | 0.548972 | 4_2:+57232941 | None:intergenic |
| TTTCCATAATAGTGTATACA+AGG | 0.550288 | 4_2:+57229602 | None:intergenic |
| TTTCATCTACAGACCTGTAT+CGG | 0.555411 | 4_2:+57231159 | None:intergenic |
| AGTAAACTGGTGAAGAACAT+TGG | 0.555932 | 4_2:-57233420 | Msa0609750:three_prime_UTR |
| CCCAGTCCCATCTGTCAACA+TGG | 0.557354 | 4_2:+57232067 | None:intergenic |
| GCCTCAAGGAAAACACCAGC+AGG | 0.557589 | 4_2:+57232152 | None:intergenic |
| ATCTCAAAATAAGGATGACA+TGG | 0.558115 | 4_2:-57233526 | Msa0609750:three_prime_UTR |
| TGTCATTGCAGAGTCGTCGG+GGG | 0.558966 | 4_2:-57229638 | Msa0609750:three_prime_UTR |
| TTGGAGTGATTTGTCATAAG+GGG | 0.559276 | 4_2:+57228800 | None:intergenic |
| ACCATGTTGACAGATGGGAC+TGG | 0.561044 | 4_2:-57232068 | Msa0609750:three_prime_UTR |
| AGTTAAGTACAGTCATGGAT+GGG | 0.561896 | 4_2:-57233566 | Msa0609750:three_prime_UTR |
| AAACACCCCGTAAGCTTCAG+TGG | 0.561927 | 4_2:-57230306 | Msa0609750:three_prime_UTR |
| TGAAGACAATGCAATATCCA+TGG | 0.562525 | 4_2:-57231223 | Msa0609750:three_prime_UTR |
| TGTAGAAGCAGATCCATTGA+AGG | 0.562590 | 4_2:-57231782 | Msa0609750:three_prime_UTR |
| GTGTCATTGCAGAGTCGTCG+GGG | 0.564487 | 4_2:-57229639 | Msa0609750:three_prime_UTR |
| CTCTGTTCAACTCTTCAAGA+AGG | 0.564962 | 4_2:+57232009 | None:intergenic |
| GAAATTAGAAGATATGATAG+TGG | 0.564975 | 4_2:+57231188 | None:intergenic |
| GCTCACAAACTTTGGTAGCA+TGG | 0.567179 | 4_2:-57228984 | Msa0609750:three_prime_UTR |
| TTTCTACTATTAAAGCCCTA+AGG | 0.569692 | 4_2:-57232184 | Msa0609750:three_prime_UTR |
| TTTATCTGGTCTAGTCTCTG+AGG | 0.569936 | 4_2:-57228763 | Msa0609750:three_prime_UTR |
| AAAACATGGCTGAGACAAGT+AGG | 0.570506 | 4_2:-57229582 | Msa0609750:three_prime_UTR |
| CCTTGAAAGATTGTAAAGCA+TGG | 0.574343 | 4_2:+57234069 | None:intergenic |
| TATGGCAGAAATTTATCTTG+GGG | 0.576637 | 4_2:-57229009 | Msa0609750:intron |
| GTTCACACCCTTTGTAAACA+TGG | 0.577340 | 4_2:-57234720 | Msa0609750:CDS |
| GGAACTTCTTGGAGGTGATG+AGG | 0.577500 | 4_2:-57229533 | Msa0609750:three_prime_UTR |
| GGAGGAGTTAAGTACAGTCA+TGG | 0.578050 | 4_2:-57233571 | Msa0609750:three_prime_UTR |
| ATTGTGTGGCGTTGCAGAAG+AGG | 0.578118 | 4_2:+57234796 | None:intergenic |
| TTGATGCGCCTGCAGTAAGA+AGG | 0.578224 | 4_2:+57232231 | None:intergenic |
| CACCGGACAACATTCAAAGC+TGG | 0.579419 | 4_2:-57232285 | Msa0609750:three_prime_UTR |
| TTGGTTCACCAACTGCCTCA+AGG | 0.580208 | 4_2:+57232138 | None:intergenic |
| TAAGGGATTACTTAAGAGGA+AGG | 0.582412 | 4_2:-57232115 | Msa0609750:three_prime_UTR |
| ATTCCAGCCGCAACTTCCAT+CGG | 0.585035 | 4_2:+57232818 | None:intergenic |
| ACAGGTTCAGGCAGGTTAAG+GGG | 0.585080 | 4_2:+57230373 | None:intergenic |
| AGGGAAAACGCGAGGAAGTG+TGG | 0.588281 | 4_2:+57233956 | None:intergenic |
| CCTCTGAAAGTCTTGTCCGA+TGG | 0.589489 | 4_2:-57232834 | Msa0609750:three_prime_UTR |
| AATGCTCAGGAACTTCTTGG+AGG | 0.589642 | 4_2:-57229541 | Msa0609750:three_prime_UTR |
| TCGCGGTAAATATGGACCTA+CGG | 0.591552 | 4_2:+57235083 | None:intergenic |
| ATGGCTGAGACAAGTAGGAA+TGG | 0.591664 | 4_2:-57229577 | Msa0609750:three_prime_UTR |
| TTGTGTGGCGTTGCAGAAGA+GGG | 0.593354 | 4_2:+57234797 | None:intergenic |
| CTAAGGACGATAGATCCTGC+TGG | 0.595778 | 4_2:-57232167 | Msa0609750:three_prime_UTR |
| GTCATTGCAGAGTCGTCGGG+GGG | 0.598079 | 4_2:-57229637 | Msa0609750:three_prime_UTR |
| TACTCACCCATGCCAAGAGT+CGG | 0.599515 | 4_2:+57227522 | None:intergenic |
| CAAGATAGACAAGAAGGGCA+TGG | 0.599694 | 4_2:+57232947 | None:intergenic |
| GCAAAAGTATATGATGTAGC+GGG | 0.601948 | 4_2:-57233161 | Msa0609750:three_prime_UTR |
| AGGATCAAATGTCAGAGGAA+AGG | 0.602132 | 4_2:-57234049 | Msa0609750:CDS |
| CACTCATCACTGTTCAACAT+AGG | 0.604772 | 4_2:-57234873 | Msa0609750:CDS |
| AATATGCAAGGATGGTGAGA+TGG | 0.607005 | 4_2:-57233484 | Msa0609750:three_prime_UTR |
| ATGGAGAGGACGAAAACTTG+TGG | 0.608389 | 4_2:+57235005 | None:intergenic |
| ACACTGATGATAGGCAAGCA+TGG | 0.608815 | 4_2:-57231944 | Msa0609750:three_prime_UTR |
| TGATAATAGATGCAAGAACA+GGG | 0.609832 | 4_2:+57230072 | None:intergenic |
| CGGACAACATTCAAAGCTGG+TGG | 0.611952 | 4_2:-57232282 | Msa0609750:three_prime_UTR |
| ATTGTCGTTGTTCCACAGTG+TGG | 0.612381 | 4_2:+57234906 | None:intergenic |
| GGTAGAAAATCAACTTCGGA+AGG | 0.612407 | 4_2:-57229488 | Msa0609750:three_prime_UTR |
| GGTGCTGGCGATCTTTCATA+CGG | 0.612729 | 4_2:-57234762 | Msa0609750:CDS |
| CAAGTCCTACAAATTCAGAC+AGG | 0.613138 | 4_2:+57227278 | None:intergenic |
| AGGAAACCGACTCTTGGCAT+GGG | 0.613820 | 4_2:-57227528 | Msa0609750:three_prime_UTR |
| ACTTGGAAATTACTTGTCTG+AGG | 0.615031 | 4_2:+57231350 | None:intergenic |
| TGGAGTGATTTGTCATAAGG+GGG | 0.616687 | 4_2:+57228801 | None:intergenic |
| TCGCATTCACAATACTCTCA+AGG | 0.617271 | 4_2:-57228954 | Msa0609750:intron |
| AAACTATAGATTGTAACATG+TGG | 0.618257 | 4_2:+57227419 | None:intergenic |
| AAACTTTGTCTTGAGTACAC+CGG | 0.620585 | 4_2:-57232302 | Msa0609750:three_prime_UTR |
| TAATCGTTGATTATCCCGAT+AGG | 0.622726 | 4_2:-57232744 | Msa0609750:intron |
| TCGAAAATGGAGATCATGCA+CGG | 0.624953 | 4_2:+57235121 | None:intergenic |
| AACAAACCGCTTACAAACCA+GGG | 0.625904 | 4_2:+57233937 | None:intergenic |
| ACCGCCGAGAAGAGATTGTG+TGG | 0.626583 | 4_2:+57234782 | None:intergenic |
| ACTTCTTGGAGGTGATGAGG+AGG | 0.630481 | 4_2:-57229530 | Msa0609750:three_prime_UTR |
| ATACACTATTATGGAAAACA+TGG | 0.630647 | 4_2:-57229596 | Msa0609750:three_prime_UTR |
| GAGACAAGTAGGAATGGAGG+CGG | 0.631254 | 4_2:-57229571 | Msa0609750:three_prime_UTR |
| GTATCCCAATAGCAGCTGCA+AGG | 0.631753 | 4_2:+57229939 | None:intergenic |
| ATAGATTGTAACATGTGGAG+TGG | 0.631862 | 4_2:+57227424 | None:intergenic |
| TAGGTCCATATTTACCGCGA+AGG | 0.632388 | 4_2:-57235080 | Msa0609750:five_prime_UTR |
| ACTCAAGACCATGTTTACAA+AGG | 0.633854 | 4_2:+57234712 | None:intergenic |
| ACACTGTGGAACAACGACAA+TGG | 0.633855 | 4_2:-57234904 | Msa0609750:exon |
| GTTAAGTACAGTCATGGATG+GGG | 0.634457 | 4_2:-57233565 | Msa0609750:three_prime_UTR |
| TCTTCAAGAAGGCTATCACC+AGG | 0.634815 | 4_2:+57232020 | None:intergenic |
| TTTCAAGGATCAAATGTCAG+AGG | 0.635912 | 4_2:-57234054 | Msa0609750:CDS |
| CATCGGACAAGACTTTCAGA+GGG | 0.638744 | 4_2:+57232835 | None:intergenic |
| GTCACCAAGATAGACAAGAA+GGG | 0.640544 | 4_2:+57232942 | None:intergenic |
| TGAAATGAAACAGATTGATG+AGG | 0.640549 | 4_2:-57234177 | Msa0609750:intron |
| CATGTTGACAGATGGGACTG+GGG | 0.641737 | 4_2:-57232066 | Msa0609750:three_prime_UTR |
| CCTCGGTAGAAAATCAACTT+CGG | 0.642262 | 4_2:-57229492 | Msa0609750:three_prime_UTR |
| AAAACTTGTGGACCCCACAC+AGG | 0.643778 | 4_2:+57235017 | None:intergenic |
| TGGAAATTACTTGTCTGAGG+TGG | 0.648039 | 4_2:+57231353 | None:intergenic |
| GTCCTACAAATTCAGACAGG+TGG | 0.648346 | 4_2:+57227281 | None:intergenic |
| GTAGAAGCAGATCCATTGAA+GGG | 0.650235 | 4_2:-57231781 | Msa0609750:three_prime_UTR |
| TAGTGACCATGTTGACAGAT+GGG | 0.652904 | 4_2:-57232073 | Msa0609750:three_prime_UTR |
| GTTGAAGACAGAAAATGGAG+AGG | 0.653996 | 4_2:+57234991 | None:intergenic |
| GAGAAGTTAGAACTTCGGGA+TGG | 0.655185 | 4_2:-57228741 | Msa0609750:three_prime_UTR |
| CTGTGGAACAACGACAATGG+AGG | 0.655480 | 4_2:-57234901 | Msa0609750:exon |
| TGAAGGGAAGCAGAAACCAA+AGG | 0.658879 | 4_2:-57231765 | Msa0609750:three_prime_UTR |
| AATAGTGTATACAAGGTCAG+AGG | 0.660102 | 4_2:+57229609 | None:intergenic |
| GGGAAGCAGAAACCAAAGGA+AGG | 0.661505 | 4_2:-57231761 | Msa0609750:three_prime_UTR |
| ATTAGAAGATATGATAGTGG+CGG | 0.665563 | 4_2:+57231191 | None:intergenic |
| TACAAACCAGGGAAAACGCG+AGG | 0.666974 | 4_2:+57233948 | None:intergenic |
| GCTGAGACAAGTAGGAATGG+AGG | 0.667699 | 4_2:-57229574 | Msa0609750:three_prime_UTR |
| ATAGTGACCATGTTGACAGA+TGG | 0.668208 | 4_2:-57232074 | Msa0609750:three_prime_UTR |
| GTAGTGAGCTTATGGAACTG+TGG | 0.675141 | 4_2:-57228700 | Msa0609750:three_prime_UTR |
| AGGGCATGGAGAAACTGGAG+AGG | 0.675629 | 4_2:+57232961 | None:intergenic |
| CATCTACAGACCTGTATCGG+AGG | 0.676557 | 4_2:+57231162 | None:intergenic |
| ATGTTGACAGATGGGACTGG+GGG | 0.677133 | 4_2:-57232065 | Msa0609750:three_prime_UTR |
| TGAGGAGGAAGACAGATCTG+TGG | 0.687455 | 4_2:-57229515 | Msa0609750:three_prime_UTR |
| AATGCATATCGACATCCCGT+AGG | 0.688370 | 4_2:-57235099 | Msa0609750:five_prime_UTR |
| GATAATAGATGCAAGAACAG+GGG | 0.704742 | 4_2:+57230073 | None:intergenic |
| TGAAATTTCAAGATCAAACG+AGG | 0.708066 | 4_2:-57230049 | Msa0609750:intron |
| TCGAAACACAAACCACACTG+TGG | 0.710483 | 4_2:-57234918 | Msa0609750:five_prime_UTR |
| TCGGACAAGACTTTCAGAGG+GGG | 0.715598 | 4_2:+57232837 | None:intergenic |
| AAGCATGGATCAATGCCACA+CGG | 0.717438 | 4_2:-57231929 | Msa0609750:intron |
| ATCGGACAAGACTTTCAGAG+GGG | 0.728009 | 4_2:+57232836 | None:intergenic |
| GCCACACAATCTCTTCTCGG+CGG | 0.741154 | 4_2:-57234783 | Msa0609750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTATATAATAAATAT+TGG | + | chr4_2:57233136-57233155 | None:intergenic | 0.0% |
| !! | ATTTCATAAAAAAAAAATCA+TGG | + | chr4_2:57228100-57228119 | None:intergenic | 10.0% |
| !!! | ATTTGAAATATAGTATAAAA+AGG | + | chr4_2:57231377-57231396 | None:intergenic | 10.0% |
| !!! | TGAATTTTTATTGATTTCTT+TGG | - | chr4_2:57227676-57227695 | Msa0609750:intron | 15.0% |
| !!! | TTTTATGTTAATGTTAATGA+GGG | - | chr4_2:57228381-57228400 | Msa0609750:intron | 15.0% |
| !!! | AAACTTCAAATTTTTCTAAT+CGG | - | chr4_2:57228634-57228653 | Msa0609750:intron | 15.0% |
| !! | TCTGTTTAATTATAATCTTT+GGG | - | chr4_2:57229076-57229095 | Msa0609750:intron | 15.0% |
| !! | ACATATATAATACTTATAAC+TGG | - | chr4_2:57229291-57229310 | Msa0609750:intron | 15.0% |
| !!! | TTATGTCTTATTAAATTGAA+TGG | - | chr4_2:57229640-57229659 | Msa0609750:three_prime_UTR | 15.0% |
| !! | TCTAATTGAAGATTATTTAT+TGG | + | chr4_2:57231299-57231318 | None:intergenic | 15.0% |
| !! | TATACTATATTTCAAATTTC+AGG | - | chr4_2:57231380-57231399 | Msa0609750:three_prime_UTR | 15.0% |
| !! | ATACTATATTTCAAATTTCA+GGG | - | chr4_2:57231381-57231400 | Msa0609750:three_prime_UTR | 15.0% |
| !!! | ATTCAAATCATTTTAGTTTT+AGG | - | chr4_2:57231435-57231454 | Msa0609750:three_prime_UTR | 15.0% |
| !!! | AAATGTATTGATGAATTTTT+AGG | + | chr4_2:57232271-57232290 | None:intergenic | 15.0% |
| !!! | TAAATAGGAGAATAAATTTT+TGG | - | chr4_2:57232387-57232406 | Msa0609750:intron | 15.0% |
| !!! | AATTTTTTTGGTATACTTTT+AGG | - | chr4_2:57232443-57232462 | Msa0609750:intron | 15.0% |
| !! | TAAATATAACGTACATTAAA+AGG | + | chr4_2:57232936-57232955 | None:intergenic | 15.0% |
| !! | AATATGCTTATATTTATTCA+GGG | + | chr4_2:57233082-57233101 | None:intergenic | 15.0% |
| !! | AAATATGCTTATATTTATTC+AGG | + | chr4_2:57233083-57233102 | None:intergenic | 15.0% |
| !!! | AATAATAAATATTTTGCCTT+AGG | - | chr4_2:57233149-57233168 | Msa0609750:three_prime_UTR | 15.0% |
| !!! | ATTTAACACCATAATTTTAA+AGG | + | chr4_2:57234448-57234467 | None:intergenic | 15.0% |
| !! | AAAAGTTATGTTATATTATG+TGG | - | chr4_2:57235050-57235069 | Msa0609750:five_prime_UTR | 15.0% |
| !!! | AAATAGTGAAATTTTCAGTT+GGG | + | chr4_2:57227643-57227662 | None:intergenic | 20.0% |
| !!! | CTTTTATGTTAATGTTAATG+AGG | - | chr4_2:57228380-57228399 | Msa0609750:intron | 20.0% |
| !!! | TTTAGCTCTAATTTAGAAAT+AGG | - | chr4_2:57228517-57228536 | Msa0609750:intron | 20.0% |
| !!! | TGCTATATTTTTACTACTAA+AGG | - | chr4_2:57228957-57228976 | Msa0609750:three_prime_UTR | 20.0% |
| !! | CATTTATGAAATTCAAAATC+TGG | - | chr4_2:57228986-57229005 | Msa0609750:three_prime_UTR | 20.0% |
| !! | CTCTGTTTAATTATAATCTT+TGG | - | chr4_2:57229075-57229094 | Msa0609750:intron | 20.0% |
| !! | TTTAATTATAATCTTTGGGT+GGG | - | chr4_2:57229080-57229099 | Msa0609750:intron | 20.0% |
| !!! | TAGATAAACAAATGTTTTCA+CGG | - | chr4_2:57229263-57229282 | Msa0609750:intron | 20.0% |
| !! | AACGATTATCTCAAATAATT+TGG | + | chr4_2:57229535-57229554 | None:intergenic | 20.0% |
| !! | CTAAAAAAAAACTAATTCTC+TGG | - | chr4_2:57229870-57229889 | Msa0609750:intron | 20.0% |
| !! | TTATTTGAATTAGTACCTTA+AGG | + | chr4_2:57230692-57230711 | None:intergenic | 20.0% |
| !! | ATTAAACAGATGTTTACATA+TGG | + | chr4_2:57230801-57230820 | None:intergenic | 20.0% |
| !! | AAATAAAGGATATTTGAACT+TGG | + | chr4_2:57230961-57230980 | None:intergenic | 20.0% |
| !! | ATAATAGTTGAAACTATCTT+TGG | + | chr4_2:57230994-57231013 | None:intergenic | 20.0% |
| !! | AACCTAAGTATAATATATAC+GGG | + | chr4_2:57231248-57231267 | None:intergenic | 20.0% |
| !! | GAACCTAAGTATAATATATA+CGG | + | chr4_2:57231249-57231268 | None:intergenic | 20.0% |
| !!! | TTGTTCAAATATTGGAATTT+TGG | + | chr4_2:57231496-57231515 | None:intergenic | 20.0% |
| !! | TTTACATTTGTCTATTATGT+TGG | - | chr4_2:57231568-57231587 | Msa0609750:intron | 20.0% |
| !! | TTACATTTGTCTATTATGTT+GGG | - | chr4_2:57231569-57231588 | Msa0609750:intron | 20.0% |
| !! | ACTACTAATCAAATTCAAAA+AGG | + | chr4_2:57232073-57232092 | None:intergenic | 20.0% |
| !!! | AATAAATTTTTGGATAAGCA+AGG | - | chr4_2:57232397-57232416 | Msa0609750:intron | 20.0% |
| !! | TACCAAAAAAATTATACAAG+AGG | + | chr4_2:57232436-57232455 | None:intergenic | 20.0% |
| !!! | AATAACTAGAATTCTTGTTT+TGG | + | chr4_2:57232563-57232582 | None:intergenic | 20.0% |
| !!! | ATCTAACATGTATTGTTTTA+TGG | - | chr4_2:57233264-57233283 | Msa0609750:intron | 20.0% |
| !! | TTTACACCTTTATAAATGTT+AGG | - | chr4_2:57233404-57233423 | Msa0609750:three_prime_UTR | 20.0% |
| !!! | ATAGCTATTTTGTAAAATTG+AGG | + | chr4_2:57233833-57233852 | None:intergenic | 20.0% |
| !!! | CCATAATTTTAAAGGTTATT+GGG | + | chr4_2:57234440-57234459 | None:intergenic | 20.0% |
| !!! | ACCATAATTTTAAAGGTTAT+TGG | + | chr4_2:57234441-57234460 | None:intergenic | 20.0% |
| !! | TCATTTACTGTTGTTAATAT+TGG | - | chr4_2:57234616-57234635 | Msa0609750:intron | 20.0% |
| !!! | GGTTGTTATTATCATAATTT+TGG | - | chr4_2:57234637-57234656 | Msa0609750:intron | 20.0% |
| !!! | ATCATAATTTTGGACTTTAA+TGG | - | chr4_2:57234647-57234666 | Msa0609750:intron | 20.0% |
| !!! | AAAAAAAGCTTTTATTGAAC+AGG | - | chr4_2:57234795-57234814 | Msa0609750:CDS | 20.0% |
| !!! | TTTGTTTTTTTTTTCCTGTG+TGG | - | chr4_2:57227260-57227279 | Msa0609750:three_prime_UTR | 25.0% |
| !!! | TTGTTTTTTTTTTCCTGTGT+GGG | - | chr4_2:57227261-57227280 | Msa0609750:three_prime_UTR | 25.0% |
| !!! | AACTGTGTTTTTTCAATGTT+TGG | + | chr4_2:57227325-57227344 | None:intergenic | 25.0% |
| !! | CAAATAGTGAAATTTTCAGT+TGG | + | chr4_2:57227644-57227663 | None:intergenic | 25.0% |
| !!! | TTATTGATTTCTTTGGTTGT+AGG | - | chr4_2:57227683-57227702 | Msa0609750:intron | 25.0% |
| ! | CATTCATTTACAGTATGAAA+AGG | + | chr4_2:57228411-57228430 | None:intergenic | 25.0% |
| ! | CCATAAAAAAGATCAAACAA+GGG | + | chr4_2:57228609-57228628 | None:intergenic | 25.0% |
| !!! | CCTTGTTTGATCTTTTTTAT+GGG | - | chr4_2:57228607-57228626 | Msa0609750:intron | 25.0% |
| !!! | TGCATTGGTATTTTAAAAGA+AGG | - | chr4_2:57228695-57228714 | Msa0609750:three_prime_UTR | 25.0% |
| !! | TGATGATGTATCTCAAAATA+AGG | - | chr4_2:57228756-57228775 | Msa0609750:three_prime_UTR | 25.0% |
| ! | TGAAAAAGGAAAAATATGCA+AGG | - | chr4_2:57228795-57228814 | Msa0609750:three_prime_UTR | 25.0% |
| ! | GTTTAATTATAATCTTTGGG+TGG | - | chr4_2:57229079-57229098 | Msa0609750:intron | 25.0% |
| ! | ACAAGTAACAAAATACCTAT+CGG | + | chr4_2:57229565-57229584 | None:intergenic | 25.0% |
| ! | TTCAAAATTTACTCAACTCA+AGG | + | chr4_2:57229827-57229846 | None:intergenic | 25.0% |
| !! | AAATTTTGAACTCCAACAAT+AGG | - | chr4_2:57229837-57229856 | Msa0609750:intron | 25.0% |
| !! | GTATTGGTGTAATATATCAT+TGG | + | chr4_2:57230086-57230105 | None:intergenic | 25.0% |
| ! | CTTTAATAGTAGAAACGTAT+TGG | + | chr4_2:57230102-57230121 | None:intergenic | 25.0% |
| !! | GAAGAAATTCAAGAGAATTT+TGG | - | chr4_2:57230307-57230326 | Msa0609750:three_prime_UTR | 25.0% |
| !!! | ATGATTTTAACACTGATGAT+AGG | - | chr4_2:57230338-57230357 | Msa0609750:three_prime_UTR | 25.0% |
| ! | CATATTATAAATATACCGTG+TGG | + | chr4_2:57230380-57230399 | None:intergenic | 25.0% |
| ! | CACACGGTATATTTATAATA+TGG | - | chr4_2:57230378-57230397 | Msa0609750:three_prime_UTR | 25.0% |
| ! | AAATTGATGTTTCTTCTCAA+TGG | - | chr4_2:57230457-57230476 | Msa0609750:intron | 25.0% |
| ! | AATTGATGTTTCTTCTCAAT+GGG | - | chr4_2:57230458-57230477 | Msa0609750:intron | 25.0% |
| ! | CATATCTAGTCAAACAAAAA+AGG | + | chr4_2:57230726-57230745 | None:intergenic | 25.0% |
| ! | ATTATGCTCAATGATCTAAT+TGG | - | chr4_2:57230872-57230891 | Msa0609750:intron | 25.0% |
| ! | GAAATTAGAAGATATGATAG+TGG | + | chr4_2:57231106-57231125 | None:intergenic | 25.0% |
| ! | CTATCATATCTTCTAATTTC+TGG | - | chr4_2:57231106-57231125 | Msa0609750:intron | 25.0% |
| ! | TAGTATAAAAAGGAGTCATT+GGG | + | chr4_2:57231367-57231386 | None:intergenic | 25.0% |
| ! | ATAGTATAAAAAGGAGTCAT+TGG | + | chr4_2:57231368-57231387 | None:intergenic | 25.0% |
| ! | GATTACAATTGCTTAAGATA+AGG | + | chr4_2:57231474-57231493 | None:intergenic | 25.0% |
| !! | AGAAAAGCTTGTTCAAATAT+TGG | + | chr4_2:57231504-57231523 | None:intergenic | 25.0% |
| ! | ATAGCACTATAAAATGCTAA+AGG | + | chr4_2:57231672-57231691 | None:intergenic | 25.0% |
| !!! | ATTATGTTTTTGCTTTCAGT+TGG | - | chr4_2:57232318-57232337 | Msa0609750:three_prime_UTR | 25.0% |
| ! | TACCTTTGGATGTATTAAAT+AGG | - | chr4_2:57232372-57232391 | Msa0609750:intron | 25.0% |
| ! | TTATTATCTCTTGCTCAATT+AGG | - | chr4_2:57232519-57232538 | Msa0609750:intron | 25.0% |
| ! | TTTCCATAATAGTGTATACA+AGG | + | chr4_2:57232692-57232711 | None:intergenic | 25.0% |
| ! | ATACACTATTATGGAAAACA+TGG | - | chr4_2:57232695-57232714 | Msa0609750:intron | 25.0% |
| !!! | TTAAAAGGACTCTAAAATGT+TGG | + | chr4_2:57232921-57232940 | None:intergenic | 25.0% |
| ! | TGTACGTTATATTTAACCTT+TGG | - | chr4_2:57232941-57232960 | Msa0609750:three_prime_UTR | 25.0% |
| ! | GAATTTGTGGTAATTCTTAA+TGG | - | chr4_2:57232965-57232984 | Msa0609750:three_prime_UTR | 25.0% |
| !! | TATTGAAGTATTCAATCACA+AGG | - | chr4_2:57233213-57233232 | Msa0609750:intron | 25.0% |
| !! | ATTGAAGTATTCAATCACAA+GGG | - | chr4_2:57233214-57233233 | Msa0609750:intron | 25.0% |
| ! | TTTATGGCAGAAATTTATCT+TGG | - | chr4_2:57233280-57233299 | Msa0609750:intron | 25.0% |
| ! | TTATGGCAGAAATTTATCTT+GGG | - | chr4_2:57233281-57233300 | Msa0609750:intron | 25.0% |
| ! | TGTGTTCCTAACATTTATAA+AGG | + | chr4_2:57233413-57233432 | None:intergenic | 25.0% |
| !! | ATAAAAAGCTTTGTAGTTGT+TGG | + | chr4_2:57233513-57233532 | None:intergenic | 25.0% |
| !! | ACCTTTTTGCTTAAAACTTA+TGG | + | chr4_2:57233629-57233648 | None:intergenic | 25.0% |
| ! | CTATGCAAACAAAACAAAAA+TGG | + | chr4_2:57233683-57233702 | None:intergenic | 25.0% |
| !! | GTTTTGTGTAATGAGTTATA+AGG | + | chr4_2:57233707-57233726 | None:intergenic | 25.0% |
| ! | ATTACACAAAACTGTAGTAA+TGG | - | chr4_2:57233715-57233734 | Msa0609750:intron | 25.0% |
| ! | ATTGATGTTCTTTAATCGAA+GGG | + | chr4_2:57233861-57233880 | None:intergenic | 25.0% |
| ! | TCAATATTTAGGTATTTCAG+TGG | + | chr4_2:57233936-57233955 | None:intergenic | 25.0% |
| !!! | CCCAATAACCTTTAAAATTA+TGG | - | chr4_2:57234437-57234456 | Msa0609750:intron | 25.0% |
| !!! | AATTTGCTGATAAACTTTGA+AGG | - | chr4_2:57234687-57234706 | Msa0609750:CDS | 25.0% |
| ! | GAGAAATGAGATAACATAAA+TGG | - | chr4_2:57234827-57234846 | Msa0609750:CDS | 25.0% |
| ! | AAACTATAGATTGTAACATG+TGG | + | chr4_2:57234875-57234894 | None:intergenic | 25.0% |
| ! | TGTCAACTTGAAGATATTAT+TGG | - | chr4_2:57234951-57234970 | Msa0609750:five_prime_UTR | 25.0% |
| !! | ATAACATAACTTTTCCTTTC+AGG | + | chr4_2:57235044-57235063 | None:intergenic | 25.0% |
| AAAATTGTTAATTGCCTTCG+CGG | + | chr4_2:57227228-57227247 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTTTTTCCTGTGTG+GGG | - | chr4_2:57227262-57227281 | Msa0609750:three_prime_UTR | 30.0% |
| ! | TAGGAAACTTTTGAACGAAA+TGG | - | chr4_2:57227702-57227721 | Msa0609750:intron | 30.0% |
| ! | AGGAAACTTTTGAACGAAAT+GGG | - | chr4_2:57227703-57227722 | Msa0609750:intron | 30.0% |
| AAACCAACAAAATCAGCATA+AGG | + | chr4_2:57227756-57227775 | None:intergenic | 30.0% | |
| !! | TTTGTTGGTTTGAACAAGAA+TGG | - | chr4_2:57227765-57227784 | Msa0609750:intron | 30.0% |
| ACTGAATTAATCACATGTGT+CGG | - | chr4_2:57227897-57227916 | Msa0609750:intron | 30.0% | |
| TGTTCATATCTATGCTTCAT+AGG | + | chr4_2:57228013-57228032 | None:intergenic | 30.0% | |
| TGAAATGAAACAGATTGATG+AGG | - | chr4_2:57228114-57228133 | Msa0609750:intron | 30.0% | |
| ! | ACCATATGGCTAATTTTACA+TGG | - | chr4_2:57228482-57228501 | Msa0609750:intron | 30.0% |
| TCCATGTAAAATTAGCCATA+TGG | + | chr4_2:57228486-57228505 | None:intergenic | 30.0% | |
| !!! | CCCTTGTTTGATCTTTTTTA+TGG | - | chr4_2:57228606-57228625 | Msa0609750:intron | 30.0% |
| CCCATAAAAAAGATCAAACA+AGG | + | chr4_2:57228610-57228629 | None:intergenic | 30.0% | |
| TACCATTAGCTATATTGCAT+TGG | - | chr4_2:57228680-57228699 | Msa0609750:three_prime_UTR | 30.0% | |
| TACCAATGCAATATAGCTAA+TGG | + | chr4_2:57228685-57228704 | None:intergenic | 30.0% | |
| !! | TTGGTATTTTAAAAGAAGGC+TGG | - | chr4_2:57228699-57228718 | Msa0609750:three_prime_UTR | 30.0% |
| ATCTCAAAATAAGGATGACA+TGG | - | chr4_2:57228765-57228784 | Msa0609750:three_prime_UTR | 30.0% | |
| GACATGGATTTAGATGAAAA+AGG | - | chr4_2:57228781-57228800 | Msa0609750:three_prime_UTR | 30.0% | |
| AAAGGAAAAATATGCAAGGA+TGG | - | chr4_2:57228799-57228818 | Msa0609750:three_prime_UTR | 30.0% | |
| ATTCTCAGAAAACAGTAAAC+TGG | - | chr4_2:57228858-57228877 | Msa0609750:intron | 30.0% | |
| AAGTCTTGGATTTACTTCAA+TGG | - | chr4_2:57228915-57228934 | Msa0609750:intron | 30.0% | |
| TCTTACAATCTATTCAAAGC+TGG | - | chr4_2:57229173-57229192 | Msa0609750:intron | 30.0% | |
| CATTTGTTTATCTAAAGAGC+TGG | + | chr4_2:57229257-57229276 | None:intergenic | 30.0% | |
| ACTTATAACTGGAATCATTC+AGG | - | chr4_2:57229302-57229321 | Msa0609750:intron | 30.0% | |
| ATGAAACACTGCAAGATTTA+AGG | - | chr4_2:57229505-57229524 | Msa0609750:three_prime_UTR | 30.0% | |
| CAAGTAACAAAATACCTATC+GGG | + | chr4_2:57229564-57229583 | None:intergenic | 30.0% | |
| ! | AATTTTCTAACAGAAAACCC+AGG | + | chr4_2:57229604-57229623 | None:intergenic | 30.0% |
| ! | TAAACATGTTTCTGTCAATG+CGG | + | chr4_2:57229675-57229694 | None:intergenic | 30.0% |
| AAACATGTTTAGTCACTTAG+AGG | - | chr4_2:57229684-57229703 | Msa0609750:intron | 30.0% | |
| AACATGTTTAGTCACTTAGA+GGG | - | chr4_2:57229685-57229704 | Msa0609750:intron | 30.0% | |
| !! | AGTTTGTTAATGCCTATTGT+TGG | + | chr4_2:57229852-57229871 | None:intergenic | 30.0% |
| CAAGTATCATCAAAGAGAAA+AGG | + | chr4_2:57229944-57229963 | None:intergenic | 30.0% | |
| !!! | AGTTTTAAGTCTTCAATTGC+AGG | + | chr4_2:57229974-57229993 | None:intergenic | 30.0% |
| TTTCTACTATTAAAGCCCTA+AGG | - | chr4_2:57230107-57230126 | Msa0609750:three_prime_UTR | 30.0% | |
| !!! | TTGTTTTTGCAGATACACTT+CGG | - | chr4_2:57230824-57230843 | Msa0609750:intron | 30.0% |
| ! | GCATAATCTCACATTTTTGT+AGG | + | chr4_2:57230859-57230878 | None:intergenic | 30.0% |
| TTGGCAAAGATCACAAATAA+AGG | + | chr4_2:57230975-57230994 | None:intergenic | 30.0% | |
| !! | AAAGGCAAATTTTGGTCAAA+AGG | + | chr4_2:57231028-57231047 | None:intergenic | 30.0% |
| !! | ATTAGAAGATATGATAGTGG+CGG | + | chr4_2:57231103-57231122 | None:intergenic | 30.0% |
| AAGTATAATATATACGGGCT+AGG | + | chr4_2:57231243-57231262 | None:intergenic | 30.0% | |
| AGCCCGTATATATTATACTT+AGG | - | chr4_2:57231243-57231262 | Msa0609750:intron | 30.0% | |
| AAACTACAGCATTAAGTAAC+AGG | + | chr4_2:57231411-57231430 | None:intergenic | 30.0% | |
| AAACTCTACATGAGTTTACA+TGG | + | chr4_2:57231629-57231648 | None:intergenic | 30.0% | |
| ACTAAATCTCTTCGCATAAT+CGG | + | chr4_2:57231958-57231977 | None:intergenic | 30.0% | |
| !!! | TTTTTTTCCACTGAAGCTTA+CGG | + | chr4_2:57231995-57232014 | None:intergenic | 30.0% |
| TTCAGTGGAAAAAAAGTCTT+GGG | - | chr4_2:57232000-57232019 | Msa0609750:three_prime_UTR | 30.0% | |
| TGATAATAGATGCAAGAACA+GGG | + | chr4_2:57232222-57232241 | None:intergenic | 30.0% | |
| ATGATAATAGATGCAAGAAC+AGG | + | chr4_2:57232223-57232242 | None:intergenic | 30.0% | |
| TGAAATTTCAAGATCAAACG+AGG | - | chr4_2:57232242-57232261 | Msa0609750:three_prime_UTR | 30.0% | |
| CTCCTATTTAATACATCCAA+AGG | + | chr4_2:57232377-57232396 | None:intergenic | 30.0% | |
| !! | AAATTTTTGGATAAGCAAGG+TGG | - | chr4_2:57232400-57232419 | Msa0609750:intron | 30.0% |
| !! | AATTTTTGGATAAGCAAGGT+GGG | - | chr4_2:57232401-57232420 | Msa0609750:intron | 30.0% |
| !!! | GGCCTCTTGTATAATTTTTT+TGG | - | chr4_2:57232431-57232450 | Msa0609750:intron | 30.0% |
| TGACCTTGTATACACTATTA+TGG | - | chr4_2:57232686-57232705 | Msa0609750:intron | 30.0% | |
| TTTAACCTTTGGTGAATTTG+TGG | - | chr4_2:57232952-57232971 | Msa0609750:three_prime_UTR | 30.0% | |
| AATTACCACAAATTCACCAA+AGG | + | chr4_2:57232960-57232979 | None:intergenic | 30.0% | |
| !!! | ATGGTTTTTTGACAACGAAA+TGG | - | chr4_2:57232984-57233003 | Msa0609750:intron | 30.0% |
| ! | TATGGTTTTCGTTCATTCAA+TGG | + | chr4_2:57233046-57233065 | None:intergenic | 30.0% |
| ! | AATATTTTGCCTTAGGATGA+TGG | - | chr4_2:57233156-57233175 | Msa0609750:three_prime_UTR | 30.0% |
| TATGGCAGAAATTTATCTTG+GGG | - | chr4_2:57233282-57233301 | Msa0609750:intron | 30.0% | |
| TATACCCTTGAACAAAGAAA+GGG | - | chr4_2:57233380-57233399 | Msa0609750:three_prime_UTR | 30.0% | |
| AAAACCCTTTCTTTGTTCAA+GGG | + | chr4_2:57233387-57233406 | None:intergenic | 30.0% | |
| TAAAACCCTTTCTTTGTTCA+AGG | + | chr4_2:57233388-57233407 | None:intergenic | 30.0% | |
| ! | CAACTACAAAGCTTTTTATC+TGG | - | chr4_2:57233514-57233533 | Msa0609750:three_prime_UTR | 30.0% |
| !!! | GCCATAAGTTTTAAGCAAAA+AGG | - | chr4_2:57233625-57233644 | Msa0609750:intron | 30.0% |
| CTTATTTACTCAATGAGTTG+AGG | + | chr4_2:57233770-57233789 | None:intergenic | 30.0% | |
| GATTGATGTTCTTTAATCGA+AGG | + | chr4_2:57233862-57233881 | None:intergenic | 30.0% | |
| ATGATGAAATATTGTGACAG+AGG | + | chr4_2:57233894-57233913 | None:intergenic | 30.0% | |
| ATCAAGACAAGCATAATGTT+GGG | - | chr4_2:57233976-57233995 | Msa0609750:CDS | 30.0% | |
| ATAGAATGACTTACACTTGA+GGG | + | chr4_2:57234192-57234211 | None:intergenic | 30.0% | |
| AATAGAATGACTTACACTTG+AGG | + | chr4_2:57234193-57234212 | None:intergenic | 30.0% | |
| GTCATTCTATTCATCTAGTT+AGG | - | chr4_2:57234202-57234221 | Msa0609750:intron | 30.0% | |
| AAGGTTATTGGGTTAATATG+CGG | + | chr4_2:57234429-57234448 | None:intergenic | 30.0% | |
| ATCTGACACTGTTCAATTTA+AGG | - | chr4_2:57234487-57234506 | Msa0609750:intron | 30.0% | |
| TCTGACACTGTTCAATTTAA+GGG | - | chr4_2:57234488-57234507 | Msa0609750:intron | 30.0% | |
| GAAGACAATGATAGTCATTA+TGG | + | chr4_2:57234598-57234617 | None:intergenic | 30.0% | |
| !! | AATTTTGGACTTTAATGGAC+AGG | - | chr4_2:57234652-57234671 | Msa0609750:intron | 30.0% |
| AACACATAAGGCAACAAAAA+AGG | + | chr4_2:57234734-57234753 | None:intergenic | 30.0% | |
| TTCTATTTGGAGATGAGTGA+TGG | + | chr4_2:57227146-57227165 | None:intergenic | 35.0% | |
| TGTCGATATGCATTCGAAAA+TGG | + | chr4_2:57227186-57227205 | None:intergenic | 35.0% | |
| GTTTGGTTGAAGACAGAAAA+TGG | + | chr4_2:57227308-57227327 | None:intergenic | 35.0% | |
| CTCAAGACCATGTTTACAAA+GGG | + | chr4_2:57227581-57227600 | None:intergenic | 35.0% | |
| ACTCAAGACCATGTTTACAA+AGG | + | chr4_2:57227582-57227601 | None:intergenic | 35.0% | |
| !! | CCTCTAAGACTTTGAGAAAA+TGG | + | chr4_2:57227618-57227637 | None:intergenic | 35.0% |
| ! | CCATTTTCTCAAAGTCTTAG+AGG | - | chr4_2:57227615-57227634 | Msa0609750:three_prime_UTR | 35.0% |
| !!! | GTTCCTTATGCTGATTTTGT+TGG | - | chr4_2:57227750-57227769 | Msa0609750:intron | 35.0% |
| ACTAACAAGTACAAACCACA+AGG | + | chr4_2:57227988-57228007 | None:intergenic | 35.0% | |
| TGAAGCATAGATATGAACAC+CGG | - | chr4_2:57228014-57228033 | Msa0609750:intron | 35.0% | |
| !! | TGCTTTGGAAGAAATCTCTT+TGG | - | chr4_2:57228162-57228181 | Msa0609750:intron | 35.0% |
| !!! | GGAGAAGTGTCTGTTAATTT+TGG | - | chr4_2:57228198-57228217 | Msa0609750:intron | 35.0% |
| CCTTGAAAGATTGTAAAGCA+TGG | + | chr4_2:57228225-57228244 | None:intergenic | 35.0% | |
| CCATGCTTTACAATCTTTCA+AGG | - | chr4_2:57228222-57228241 | Msa0609750:intron | 35.0% | |
| TTTCAAGGATCAAATGTCAG+AGG | - | chr4_2:57228237-57228256 | Msa0609750:intron | 35.0% | |
| !!! | GGCATAATTTTGAAGCAGAA+AGG | - | chr4_2:57228263-57228282 | Msa0609750:intron | 35.0% |
| ACCTTACCTCTAAGTATCAA+TGG | - | chr4_2:57228290-57228309 | Msa0609750:intron | 35.0% | |
| TCCATTGATACTTAGAGGTA+AGG | + | chr4_2:57228294-57228313 | None:intergenic | 35.0% | |
| !! | GTATTTTAAAAGAAGGCTGG+AGG | - | chr4_2:57228702-57228721 | Msa0609750:three_prime_UTR | 35.0% |
| AGTTAAGTACAGTCATGGAT+GGG | - | chr4_2:57228725-57228744 | Msa0609750:three_prime_UTR | 35.0% | |
| !! | TACTGTTTTCTGAGAATCGA+CGG | + | chr4_2:57228855-57228874 | None:intergenic | 35.0% |
| AGTAAACTGGTGAAGAACAT+TGG | - | chr4_2:57228871-57228890 | Msa0609750:intron | 35.0% | |
| ! | GGCAAAAGTATATGATGTAG+CGG | - | chr4_2:57229129-57229148 | Msa0609750:intron | 35.0% |
| ! | GCAAAAGTATATGATGTAGC+GGG | - | chr4_2:57229130-57229149 | Msa0609750:intron | 35.0% |
| ATCTATTCAAAGCTGGATAC+AGG | - | chr4_2:57229180-57229199 | Msa0609750:intron | 35.0% | |
| TTTATCTAAAGAGCTGGCAA+AGG | + | chr4_2:57229251-57229270 | None:intergenic | 35.0% | |
| ! | TAATCGTTGATTATCCCGAT+AGG | - | chr4_2:57229547-57229566 | Msa0609750:three_prime_UTR | 35.0% |
| AGAAGAATTGCGATTGTTCT+TGG | - | chr4_2:57229730-57229749 | Msa0609750:intron | 35.0% | |
| AAACTTTGTCTTGAGTACAC+CGG | - | chr4_2:57229989-57230008 | Msa0609750:intron | 35.0% | |
| CCTCTTAAGTAATCCCTTAT+TGG | + | chr4_2:57230175-57230194 | None:intergenic | 35.0% | |
| CCAATAAGGGATTACTTAAG+AGG | - | chr4_2:57230172-57230191 | Msa0609750:intron | 35.0% | |
| TAAGGGATTACTTAAGAGGA+AGG | - | chr4_2:57230176-57230195 | Msa0609750:intron | 35.0% | |
| TTTCACCGTTCTTTCTGATT+TGG | - | chr4_2:57230416-57230435 | Msa0609750:intron | 35.0% | |
| GTAGACCAAATCAGAAAGAA+CGG | + | chr4_2:57230424-57230443 | None:intergenic | 35.0% | |
| CATCAATTTCATAACCTAGC+AGG | + | chr4_2:57230446-57230465 | None:intergenic | 35.0% | |
| GACATACTTGGAATGATTGT+TGG | - | chr4_2:57230555-57230574 | Msa0609750:intron | 35.0% | |
| GGAATGATTGTTGGCATAAT+TGG | - | chr4_2:57230564-57230583 | Msa0609750:intron | 35.0% | |
| ACTTGGAAATTACTTGTCTG+AGG | + | chr4_2:57230944-57230963 | None:intergenic | 35.0% | |
| TGAAGACAATGCAATATCCA+TGG | - | chr4_2:57231068-57231087 | Msa0609750:intron | 35.0% | |
| TTTCATCTACAGACCTGTAT+CGG | + | chr4_2:57231135-57231154 | None:intergenic | 35.0% | |
| AAGCAGAGCTAATTGAACTT+CGG | + | chr4_2:57231708-57231727 | None:intergenic | 35.0% | |
| ! | CTGACTTTGAAGAGAATTAC+AGG | - | chr4_2:57231890-57231909 | Msa0609750:intron | 35.0% |
| !!! | TTTTTTCCACTGAAGCTTAC+GGG | + | chr4_2:57231994-57232013 | None:intergenic | 35.0% |
| CTTCAGTGGAAAAAAAGTCT+TGG | - | chr4_2:57231999-57232018 | Msa0609750:three_prime_UTR | 35.0% | |
| !!! | TGTTCTACTTTTTTCCTTCC+AGG | - | chr4_2:57232038-57232057 | Msa0609750:three_prime_UTR | 35.0% |
| CCATTGGACATGACAAAATT+AGG | + | chr4_2:57232150-57232169 | None:intergenic | 35.0% | |
| ! | CCTAATTTTGTCATGTCCAA+TGG | - | chr4_2:57232147-57232166 | Msa0609750:three_prime_UTR | 35.0% |
| GATAATAGATGCAAGAACAG+GGG | + | chr4_2:57232221-57232240 | None:intergenic | 35.0% | |
| CTCAATTAGGAAACTTCTGT+TGG | - | chr4_2:57232532-57232551 | Msa0609750:intron | 35.0% | |
| AATAGTGTATACAAGGTCAG+AGG | + | chr4_2:57232685-57232704 | None:intergenic | 35.0% | |
| ! | GTTTTACTCTTCACTACACA+TGG | + | chr4_2:57233024-57233043 | None:intergenic | 35.0% |
| ! | CTTAGGATGATGGTTACTTT+GGG | - | chr4_2:57233166-57233185 | Msa0609750:intron | 35.0% |
| CAATACTCTCAAGGTAAGAA+TGG | - | chr4_2:57233346-57233365 | Msa0609750:three_prime_UTR | 35.0% | |
| ! | TTCTTTGTTCAAGGGTATAG+AGG | + | chr4_2:57233379-57233398 | None:intergenic | 35.0% |
| CTATACCCTTGAACAAAGAA+AGG | - | chr4_2:57233379-57233398 | Msa0609750:three_prime_UTR | 35.0% | |
| TCAGCAATGCAAAACATCTA+TGG | + | chr4_2:57233469-57233488 | None:intergenic | 35.0% | |
| ! | TTGGAGTGATTTGTCATAAG+GGG | + | chr4_2:57233494-57233513 | None:intergenic | 35.0% |
| ! | GTTGGAGTGATTTGTCATAA+GGG | + | chr4_2:57233495-57233514 | None:intergenic | 35.0% |
| ! | TGTTGGAGTGATTTGTCATA+AGG | + | chr4_2:57233496-57233515 | None:intergenic | 35.0% |
| CTAAAGAAGTAGTGAGCTTA+TGG | - | chr4_2:57233583-57233602 | Msa0609750:three_prime_UTR | 35.0% | |
| GCTTAAAACTTATGGCCAAA+AGG | + | chr4_2:57233621-57233640 | None:intergenic | 35.0% | |
| AGATGTCCACTTTCAAGAAA+TGG | - | chr4_2:57233738-57233757 | Msa0609750:intron | 35.0% | |
| ! | GACTGACTCTAACAATTTCA+AGG | + | chr4_2:57233802-57233821 | None:intergenic | 35.0% |
| GGCTACTGAAGTCAATATTT+AGG | + | chr4_2:57233947-57233966 | None:intergenic | 35.0% | |
| CATCAAGACAAGCATAATGT+TGG | - | chr4_2:57233975-57233994 | Msa0609750:CDS | 35.0% | |
| !!! | TAAGGTTTTGGGTTAAGATG+TGG | + | chr4_2:57234067-57234086 | None:intergenic | 35.0% |
| CATCTTAACCCAAAACCTTA+AGG | - | chr4_2:57234067-57234086 | Msa0609750:CDS | 35.0% | |
| !! | ACAAAGTGCCTTAAGGTTTT+GGG | + | chr4_2:57234078-57234097 | None:intergenic | 35.0% |
| !! | AACAAAGTGCCTTAAGGTTT+TGG | + | chr4_2:57234079-57234098 | None:intergenic | 35.0% |
| ! | ACCTTAAGGCACTTTGTTTA+TGG | - | chr4_2:57234081-57234100 | Msa0609750:CDS | 35.0% |
| ! | CCTTAAGGCACTTTGTTTAT+GGG | - | chr4_2:57234082-57234101 | Msa0609750:CDS | 35.0% |
| !! | ACTCACTTTTCCATCTAACT+TGG | - | chr4_2:57234130-57234149 | Msa0609750:CDS | 35.0% |
| !! | CTCACTTTTCCATCTAACTT+GGG | - | chr4_2:57234131-57234150 | Msa0609750:CDS | 35.0% |
| TAGAATGACTTACACTTGAG+GGG | + | chr4_2:57234191-57234210 | None:intergenic | 35.0% | |
| CCTCATAGCAATAACACATA+AGG | + | chr4_2:57234746-57234765 | None:intergenic | 35.0% | |
| ! | CCTTATGTGTTATTGCTATG+AGG | - | chr4_2:57234743-57234762 | Msa0609750:CDS | 35.0% |
| ATAGATTGTAACATGTGGAG+TGG | + | chr4_2:57234870-57234889 | None:intergenic | 35.0% | |
| TTAGTAGATGAGCATGAGAT+TGG | - | chr4_2:57235114-57235133 | Msa0609750:five_prime_UTR | 35.0% | |
| TCGAAAATGGAGATCATGCA+CGG | + | chr4_2:57227173-57227192 | None:intergenic | 40.0% | |
| AATTGCCTTCGCGGTAAATA+TGG | + | chr4_2:57227219-57227238 | None:intergenic | 40.0% | |
| GTTGAAGACAGAAAATGGAG+AGG | + | chr4_2:57227303-57227322 | None:intergenic | 40.0% | |
| ! | TGGTTTGTGTTTCGATGTTG+GGG | + | chr4_2:57227368-57227387 | None:intergenic | 40.0% |
| ! | GTGGTTTGTGTTTCGATGTT+GGG | + | chr4_2:57227369-57227388 | None:intergenic | 40.0% |
| ! | TGTGGTTTGTGTTTCGATGT+TGG | + | chr4_2:57227370-57227389 | None:intergenic | 40.0% |
| CACTCATCACTGTTCAACAT+AGG | - | chr4_2:57227418-57227437 | Msa0609750:three_prime_UTR | 40.0% | |
| TTTCGAGGATTTCGTGAAGT+TGG | + | chr4_2:57227468-57227487 | None:intergenic | 40.0% | |
| GTTCACACCCTTTGTAAACA+TGG | - | chr4_2:57227571-57227590 | Msa0609750:three_prime_UTR | 40.0% | |
| ACTTCTCATAGAGTTGTGTC+TGG | + | chr4_2:57228060-57228079 | None:intergenic | 40.0% | |
| AGACACAACTCTATGAGAAG+TGG | - | chr4_2:57228059-57228078 | Msa0609750:intron | 40.0% | |
| ! | CTCTTTGGAGAAACAGTATC+AGG | - | chr4_2:57228177-57228196 | Msa0609750:intron | 40.0% |
| AGGATCAAATGTCAGAGGAA+AGG | - | chr4_2:57228242-57228261 | Msa0609750:intron | 40.0% | |
| GACAGTCCATTGATACTTAG+AGG | + | chr4_2:57228299-57228318 | None:intergenic | 40.0% | |
| AACAAACCGCTTACAAACCA+GGG | + | chr4_2:57228357-57228376 | None:intergenic | 40.0% | |
| AATCTTGTCGACAATGCTCT+TGG | - | chr4_2:57228454-57228473 | Msa0609750:intron | 40.0% | |
| !! | TGCTCTTGGTTTTCACCATA+TGG | - | chr4_2:57228468-57228487 | Msa0609750:intron | 40.0% |
| TAGGTCAGTACTTTGTGCAA+TGG | - | chr4_2:57228536-57228555 | Msa0609750:intron | 40.0% | |
| GAGTTAAGTACAGTCATGGA+TGG | - | chr4_2:57228724-57228743 | Msa0609750:three_prime_UTR | 40.0% | |
| GTTAAGTACAGTCATGGATG+GGG | - | chr4_2:57228726-57228745 | Msa0609750:three_prime_UTR | 40.0% | |
| AATATGCAAGGATGGTGAGA+TGG | - | chr4_2:57228807-57228826 | Msa0609750:three_prime_UTR | 40.0% | |
| GTTCTTGATCTCAGAAGTCT+TGG | - | chr4_2:57228901-57228920 | Msa0609750:intron | 40.0% | |
| GAAGAAATTGCAAGAGACTG+AGG | + | chr4_2:57229025-57229044 | None:intergenic | 40.0% | |
| TTTATGTTGCACTTGTCACG+CGG | - | chr4_2:57229052-57229071 | Msa0609750:intron | 40.0% | |
| ! | GACTCATTTGTCTAACTTGC+AGG | - | chr4_2:57229108-57229127 | Msa0609750:intron | 40.0% |
| !! | ATGTAGCGGGAGATGATTTT+AGG | - | chr4_2:57229143-57229162 | Msa0609750:intron | 40.0% |
| GTCACCAAGATAGACAAGAA+GGG | + | chr4_2:57229352-57229371 | None:intergenic | 40.0% | |
| AGTCACCAAGATAGACAAGA+AGG | + | chr4_2:57229353-57229372 | None:intergenic | 40.0% | |
| !! | AGCTACGAAAGTACTTCATC+AGG | - | chr4_2:57229378-57229397 | Msa0609750:intron | 40.0% |
| ! | ACAGCATGACGATGATTTTG+GGG | + | chr4_2:57229421-57229440 | None:intergenic | 40.0% |
| ! | GACAGCATGACGATGATTTT+GGG | + | chr4_2:57229422-57229441 | None:intergenic | 40.0% |
| TTTCTAACAGAAAACCCAGG+AGG | + | chr4_2:57229601-57229620 | None:intergenic | 40.0% | |
| AATTCTTCTCCAACTACTGC+AGG | + | chr4_2:57229719-57229738 | None:intergenic | 40.0% | |
| ATAGTGACCATGTTGACAGA+TGG | - | chr4_2:57230217-57230236 | Msa0609750:intron | 40.0% | |
| TAGTGACCATGTTGACAGAT+GGG | - | chr4_2:57230218-57230237 | Msa0609750:intron | 40.0% | |
| CTCTGTTCAACTCTTCAAGA+AGG | + | chr4_2:57230285-57230304 | None:intergenic | 40.0% | |
| !! | AATGGGCTTTTCCAAACAGA+TGG | - | chr4_2:57230475-57230494 | Msa0609750:intron | 40.0% |
| TTCAATGGATCTGCTTCTAC+AGG | + | chr4_2:57230510-57230529 | None:intergenic | 40.0% | |
| TGTAGAAGCAGATCCATTGA+AGG | - | chr4_2:57230509-57230528 | Msa0609750:intron | 40.0% | |
| GTAGAAGCAGATCCATTGAA+GGG | - | chr4_2:57230510-57230529 | Msa0609750:intron | 40.0% | |
| CAAGTATGTCAACCTTCCTT+TGG | + | chr4_2:57230545-57230564 | None:intergenic | 40.0% | |
| CAAAGGAAGGTTGACATACT+TGG | - | chr4_2:57230543-57230562 | Msa0609750:intron | 40.0% | |
| !! | ACGTACTCTAGAACTCCTTA+AGG | - | chr4_2:57230674-57230693 | Msa0609750:intron | 40.0% |
| TGGAAATTACTTGTCTGAGG+TGG | + | chr4_2:57230941-57230960 | None:intergenic | 40.0% | |
| ! | AAGAGGGCAAAGGCAAATTT+TGG | + | chr4_2:57231036-57231055 | None:intergenic | 40.0% |
| AAATTTGCCTTTGCCCTCTT+AGG | - | chr4_2:57231036-57231055 | Msa0609750:intron | 40.0% | |
| CAATTGCTTAAGATAAGGCG+AGG | + | chr4_2:57231469-57231488 | None:intergenic | 40.0% | |
| ! | GCTTTTCTTTTCATACCACC+AGG | - | chr4_2:57231516-57231535 | Msa0609750:intron | 40.0% |
| ATGAATGACAGTGGAAAACC+TGG | + | chr4_2:57231537-57231556 | None:intergenic | 40.0% | |
| ATACGAGTGATGAATGACAG+TGG | + | chr4_2:57231546-57231565 | None:intergenic | 40.0% | |
| AGCAGAGCTAATTGAACTTC+GGG | + | chr4_2:57231707-57231726 | None:intergenic | 40.0% | |
| ! | TTTTTCCACTGAAGCTTACG+GGG | + | chr4_2:57231993-57232012 | None:intergenic | 40.0% |
| AAAAAGTCTTGGGACTGTCA+AGG | - | chr4_2:57232010-57232029 | Msa0609750:three_prime_UTR | 40.0% | |
| TCAAAAACTGTGCTAAGACC+TGG | + | chr4_2:57232059-57232078 | None:intergenic | 40.0% | |
| TGGAGTTGCAGTTTGAAGAT+AGG | - | chr4_2:57232176-57232195 | Msa0609750:three_prime_UTR | 40.0% | |
| GGAGTTGCAGTTTGAAGATA+GGG | - | chr4_2:57232177-57232196 | Msa0609750:three_prime_UTR | 40.0% | |
| ! | GTACAAACACTTTTGCAGCA+TGG | - | chr4_2:57232471-57232490 | Msa0609750:intron | 40.0% |
| AAAACATGGCTGAGACAAGT+AGG | - | chr4_2:57232709-57232728 | Msa0609750:intron | 40.0% | |
| CCTCGGTAGAAAATCAACTT+CGG | - | chr4_2:57232799-57232818 | Msa0609750:three_prime_UTR | 40.0% | |
| GGTAGAAAATCAACTTCGGA+AGG | - | chr4_2:57232803-57232822 | Msa0609750:three_prime_UTR | 40.0% | |
| CCAAAGTAACCATCATCCTA+AGG | + | chr4_2:57233168-57233187 | None:intergenic | 40.0% | |
| ! | CCTTAGGATGATGGTTACTT+TGG | - | chr4_2:57233165-57233184 | Msa0609750:intron | 40.0% |
| TCGCATTCACAATACTCTCA+AGG | - | chr4_2:57233337-57233356 | Msa0609750:three_prime_UTR | 40.0% | |
| ! | TGGAGTGATTTGTCATAAGG+GGG | + | chr4_2:57233493-57233512 | None:intergenic | 40.0% |
| TTTATCTGGTCTAGTCTCTG+AGG | - | chr4_2:57233528-57233547 | Msa0609750:three_prime_UTR | 40.0% | |
| CTGAGGAGAAGTTAGAACTT+CGG | - | chr4_2:57233545-57233564 | Msa0609750:three_prime_UTR | 40.0% | |
| TGAGGAGAAGTTAGAACTTC+GGG | - | chr4_2:57233546-57233565 | Msa0609750:three_prime_UTR | 40.0% | |
| TCCACTTTCAAGAAATGGAG+AGG | - | chr4_2:57233743-57233762 | Msa0609750:intron | 40.0% | |
| TCCTCTCCATTTCTTGAAAG+TGG | + | chr4_2:57233747-57233766 | None:intergenic | 40.0% | |
| AAGCATAATGTTGGGTCATG+AGG | - | chr4_2:57233984-57234003 | Msa0609750:CDS | 40.0% | |
| AGCATAATGTTGGGTCATGA+GGG | - | chr4_2:57233985-57234004 | Msa0609750:CDS | 40.0% | |
| ! | CCCATAAACAAAGTGCCTTA+AGG | + | chr4_2:57234085-57234104 | None:intergenic | 40.0% |
| GTTAGAAGTCCCAAGTTAGA+TGG | + | chr4_2:57234143-57234162 | None:intergenic | 40.0% | |
| AGAATGACTTACACTTGAGG+GGG | + | chr4_2:57234190-57234209 | None:intergenic | 40.0% | |
| TGAAAAAAACTCCCGCTTGA+GGG | + | chr4_2:57234232-57234251 | None:intergenic | 40.0% | |
| ATGAAAAAAACTCCCGCTTG+AGG | + | chr4_2:57234233-57234252 | None:intergenic | 40.0% | |
| ACTGTCTGACCATCATTATC+AGG | - | chr4_2:57234298-57234317 | Msa0609750:intron | 40.0% | |
| ! | GACAGTCTTCCTGATAATGA+TGG | + | chr4_2:57234310-57234329 | None:intergenic | 40.0% |
| AACAATGGTCTCAAGGTTGA+TGG | + | chr4_2:57234365-57234384 | None:intergenic | 40.0% | |
| ATCAACCTTGAGACCATTGT+TGG | - | chr4_2:57234364-57234383 | Msa0609750:intron | 40.0% | |
| TCAACCTTGAGACCATTGTT+GGG | - | chr4_2:57234365-57234384 | Msa0609750:intron | 40.0% | |
| CGGTGTACAACTCATTTGTA+TGG | + | chr4_2:57234409-57234428 | None:intergenic | 40.0% | |
| ! | TTAATGGACAGGTTCTGATC+TGG | - | chr4_2:57234663-57234682 | Msa0609750:intron | 40.0% |
| AAGATAGCAAAAGTGAGCGT+TGG | + | chr4_2:57234918-57234937 | None:intergenic | 40.0% | |
| TACCACCTGTCTGAATTTGT+AGG | - | chr4_2:57235008-57235027 | Msa0609750:five_prime_UTR | 40.0% | |
| CAAGTCCTACAAATTCAGAC+AGG | + | chr4_2:57235016-57235035 | None:intergenic | 40.0% | |
| CTGTCTGAATTTGTAGGACT+TGG | - | chr4_2:57235014-57235033 | Msa0609750:five_prime_UTR | 40.0% | |
| ! | CATGCACGGACTGTTCTATT+TGG | + | chr4_2:57227159-57227178 | None:intergenic | 45.0% |
| AATGCATATCGACATCCCGT+AGG | - | chr4_2:57227192-57227211 | Msa0609750:three_prime_UTR | 45.0% | |
| TCGCGGTAAATATGGACCTA+CGG | + | chr4_2:57227211-57227230 | None:intergenic | 45.0% | |
| TAGGTCCATATTTACCGCGA+AGG | - | chr4_2:57227211-57227230 | Msa0609750:three_prime_UTR | 45.0% | |
| ATGGAGAGGACGAAAACTTG+TGG | + | chr4_2:57227289-57227308 | None:intergenic | 45.0% | |
| !!! | ATGTTGGGGTTTTGGTGTTG+TGG | + | chr4_2:57227354-57227373 | None:intergenic | 45.0% |
| ! | GTGTTTCGATGTTGGGGTTT+TGG | + | chr4_2:57227362-57227381 | None:intergenic | 45.0% |
| TCGAAACACAAACCACACTG+TGG | - | chr4_2:57227373-57227392 | Msa0609750:three_prime_UTR | 45.0% | |
| ATTGTCGTTGTTCCACAGTG+TGG | + | chr4_2:57227388-57227407 | None:intergenic | 45.0% | |
| ACACTGTGGAACAACGACAA+TGG | - | chr4_2:57227387-57227406 | Msa0609750:three_prime_UTR | 45.0% | |
| GGTCTTCGCTGAGTTTATCT+AGG | + | chr4_2:57227447-57227466 | None:intergenic | 45.0% | |
| ! | AGAAGAGGGTATAGCTTTCG+AGG | + | chr4_2:57227483-57227502 | None:intergenic | 45.0% |
| AACGCCACACAATCTCTTCT+CGG | - | chr4_2:57227505-57227524 | Msa0609750:three_prime_UTR | 45.0% | |
| TTGAACGAAATGGGTCATCC+AGG | - | chr4_2:57227712-57227731 | Msa0609750:intron | 45.0% | |
| ! | GAAATGGGTCATCCAGGTTT+TGG | - | chr4_2:57227718-57227737 | Msa0609750:intron | 45.0% |
| AACAAAATGCCGCCAAAACC+TGG | + | chr4_2:57227733-57227752 | None:intergenic | 45.0% | |
| ! | TGCATTGACACAGAACCACA+AGG | - | chr4_2:57227839-57227858 | Msa0609750:intron | 45.0% |
| ! | ACCTCTTACAGAAGGCATGT+CGG | + | chr4_2:57227950-57227969 | None:intergenic | 45.0% |
| ! | ATGCCTTCTGTAAGAGGTGT+CGG | - | chr4_2:57227952-57227971 | Msa0609750:intron | 45.0% |
| GAGTGTGCTGTGTAATGCTT+TGG | - | chr4_2:57228147-57228166 | Msa0609750:intron | 45.0% | |
| GACTGTCTCTTCTGTGCTTA+TGG | - | chr4_2:57228312-57228331 | Msa0609750:intron | 45.0% | |
| !! | CGTTTTCCCTGGTTTGTAAG+CGG | - | chr4_2:57228348-57228367 | Msa0609750:intron | 45.0% |
| CAACAAACCGCTTACAAACC+AGG | + | chr4_2:57228358-57228377 | None:intergenic | 45.0% | |
| GGAGGAGTTAAGTACAGTCA+TGG | - | chr4_2:57228720-57228739 | Msa0609750:three_prime_UTR | 45.0% | |
| TGCAAGAGACTGAGGAAAAC+TGG | + | chr4_2:57229017-57229036 | None:intergenic | 45.0% | |
| GCGTGACAAGTGCAACATAA+AGG | + | chr4_2:57229053-57229072 | None:intergenic | 45.0% | |
| CAAGATAGACAAGAAGGGCA+TGG | + | chr4_2:57229347-57229366 | None:intergenic | 45.0% | |
| CATGCCCTTCTTGTCTATCT+TGG | - | chr4_2:57229345-57229364 | Msa0609750:intron | 45.0% | |
| !!! | GACGATGATTTTGGGGCTAA+AGG | + | chr4_2:57229414-57229433 | None:intergenic | 45.0% |
| ! | GGACAGCATGACGATGATTT+TGG | + | chr4_2:57229423-57229442 | None:intergenic | 45.0% |
| AAATCATCGTCATGCTGTCC+TGG | - | chr4_2:57229423-57229442 | Msa0609750:intron | 45.0% | |
| ATCGGACAAGACTTTCAGAG+GGG | + | chr4_2:57229458-57229477 | None:intergenic | 45.0% | |
| CATCGGACAAGACTTTCAGA+GGG | + | chr4_2:57229459-57229478 | None:intergenic | 45.0% | |
| TAATTCGCAGCTTTCCTCCT+GGG | - | chr4_2:57229584-57229603 | Msa0609750:three_prime_UTR | 45.0% | |
| GTATAGCTTCCTGCAGTAGT+TGG | - | chr4_2:57229707-57229726 | Msa0609750:intron | 45.0% | |
| TCAAGGTCAAAGCATACAGC+TGG | + | chr4_2:57229810-57229829 | None:intergenic | 45.0% | |
| !! | CACCAGCTTTGAATGTTGTC+CGG | + | chr4_2:57230011-57230030 | None:intergenic | 45.0% |
| AGCAGGATCTATCGTCCTTA+GGG | + | chr4_2:57230125-57230144 | None:intergenic | 45.0% | |
| !! | AGGCAGTTGGTGAACCAATA+AGG | - | chr4_2:57230158-57230177 | Msa0609750:intron | 45.0% |
| !! | GGCAGTTGGTGAACCAATAA+GGG | - | chr4_2:57230159-57230178 | Msa0609750:intron | 45.0% |
| TCTTCAAGAAGGCTATCACC+AGG | + | chr4_2:57230274-57230293 | None:intergenic | 45.0% | |
| ACACTGATGATAGGCAAGCA+TGG | - | chr4_2:57230347-57230366 | Msa0609750:three_prime_UTR | 45.0% | |
| AAGCATGGATCAATGCCACA+CGG | - | chr4_2:57230362-57230381 | Msa0609750:three_prime_UTR | 45.0% | |
| !! | TCTGATTTGGTCTACCTGCT+AGG | - | chr4_2:57230429-57230448 | Msa0609750:intron | 45.0% |
| TGGTTTCTGCTTCCCTTCAA+TGG | + | chr4_2:57230525-57230544 | None:intergenic | 45.0% | |
| TGAAGGGAAGCAGAAACCAA+AGG | - | chr4_2:57230526-57230545 | Msa0609750:intron | 45.0% | |
| TTCAACCTCCACACCTAAGA+GGG | + | chr4_2:57231052-57231071 | None:intergenic | 45.0% | |
| !! | AGTGGCGGCTATTTTATCCA+TGG | + | chr4_2:57231088-57231107 | None:intergenic | 45.0% |
| !! | TAATTTCTGGCCTCCGATAC+AGG | - | chr4_2:57231119-57231138 | Msa0609750:intron | 45.0% |
| AATGACAGTGGAAAACCTGG+TGG | + | chr4_2:57231534-57231553 | None:intergenic | 45.0% | |
| AACAGGTTCAGGCAGGTTAA+GGG | + | chr4_2:57231922-57231941 | None:intergenic | 45.0% | |
| AGAAGCTTGTCAACAGGTTC+AGG | + | chr4_2:57231933-57231952 | None:intergenic | 45.0% | |
| AAACTGTGCTAAGACCTGGA+AGG | + | chr4_2:57232055-57232074 | None:intergenic | 45.0% | |
| GTCATGTCCAATGGTATAGC+TGG | - | chr4_2:57232156-57232175 | Msa0609750:three_prime_UTR | 45.0% | |
| TGCAACTCCAGCTATACCAT+TGG | + | chr4_2:57232166-57232185 | None:intergenic | 45.0% | |
| AAAGACCTTGCAGCTGCTAT+TGG | - | chr4_2:57232347-57232366 | Msa0609750:intron | 45.0% | |
| AAGACCTTGCAGCTGCTATT+GGG | - | chr4_2:57232348-57232367 | Msa0609750:intron | 45.0% | |
| AGCTGCTATTGGGATACCTT+TGG | - | chr4_2:57232358-57232377 | Msa0609750:intron | 45.0% | |
| ATAAGCAAGGTGGGTCTGTT+AGG | - | chr4_2:57232410-57232429 | Msa0609750:intron | 45.0% | |
| CGATGATGTAACTTCACTCG+CGG | - | chr4_2:57232611-57232630 | Msa0609750:intron | 45.0% | |
| !! | GCGGCTGTGTTTTTGTAACA+GGG | - | chr4_2:57232630-57232649 | Msa0609750:intron | 45.0% |
| ATGGCTGAGACAAGTAGGAA+TGG | - | chr4_2:57232714-57232733 | Msa0609750:intron | 45.0% | |
| AATGCTCAGGAACTTCTTGG+AGG | - | chr4_2:57232750-57232769 | Msa0609750:three_prime_UTR | 45.0% | |
| !! | CCGAAGTTGATTTTCTACCG+AGG | + | chr4_2:57232802-57232821 | None:intergenic | 45.0% |
| GAAGGAGATGACTGTGTATG+AGG | - | chr4_2:57232821-57232840 | Msa0609750:three_prime_UTR | 45.0% | |
| CAGGGACTTCAGTTCTCTTA+TGG | + | chr4_2:57233064-57233083 | None:intergenic | 45.0% | |
| TTGGGGATGCTCACAAACTT+TGG | - | chr4_2:57233299-57233318 | Msa0609750:intron | 45.0% | |
| ! | GCTCACAAACTTTGGTAGCA+TGG | - | chr4_2:57233307-57233326 | Msa0609750:intron | 45.0% |
| GAGAAGTTAGAACTTCGGGA+TGG | - | chr4_2:57233550-57233569 | Msa0609750:three_prime_UTR | 45.0% | |
| GTAGTGAGCTTATGGAACTG+TGG | - | chr4_2:57233591-57233610 | Msa0609750:three_prime_UTR | 45.0% | |
| ! | TGGAACTGTGGTCATCCTTT+TGG | - | chr4_2:57233603-57233622 | Msa0609750:three_prime_UTR | 45.0% |
| GCATAATGTTGGGTCATGAG+GGG | - | chr4_2:57233986-57234005 | Msa0609750:CDS | 45.0% | |
| ACTTGAGGGGGAGATTGTTA+TGG | + | chr4_2:57234178-57234197 | None:intergenic | 45.0% | |
| AATGGCGGTGCAAGTATATG+TGG | + | chr4_2:57234256-57234275 | None:intergenic | 45.0% | |
| !! | AAGGTTGATGGTTCGACGAA+GGG | + | chr4_2:57234353-57234372 | None:intergenic | 45.0% |
| ATGACCCAACAATGGTCTCA+AGG | + | chr4_2:57234372-57234391 | None:intergenic | 45.0% | |
| GTCCTACAAATTCAGACAGG+TGG | + | chr4_2:57235013-57235032 | None:intergenic | 45.0% | |
| !! | TAGGACTTGGTTAGCCTGAA+AGG | - | chr4_2:57235027-57235046 | Msa0609750:five_prime_UTR | 45.0% |
| CGCGGTAAATATGGACCTAC+GGG | + | chr4_2:57227210-57227229 | None:intergenic | 50.0% | |
| AAAACTTGTGGACCCCACAC+AGG | + | chr4_2:57227277-57227296 | None:intergenic | 50.0% | |
| CTGTGGAACAACGACAATGG+AGG | - | chr4_2:57227390-57227409 | Msa0609750:three_prime_UTR | 50.0% | |
| TTGTGTGGCGTTGCAGAAGA+GGG | + | chr4_2:57227497-57227516 | None:intergenic | 50.0% | |
| ATTGTGTGGCGTTGCAGAAG+AGG | + | chr4_2:57227498-57227517 | None:intergenic | 50.0% | |
| !! | GGTGCTGGCGATCTTTCATA+CGG | - | chr4_2:57227529-57227548 | Msa0609750:three_prime_UTR | 50.0% |
| !! | ATGGGTCATCCAGGTTTTGG+CGG | - | chr4_2:57227721-57227740 | Msa0609750:intron | 50.0% |
| ! | TATGTGTCGACGTGTCCTTG+TGG | + | chr4_2:57227857-57227876 | None:intergenic | 50.0% |
| ! | CCTCTTACAGAAGGCATGTC+GGG | + | chr4_2:57227949-57227968 | None:intergenic | 50.0% |
| GTCTCACATGTGTCAGTGTC+CGG | + | chr4_2:57228036-57228055 | None:intergenic | 50.0% | |
| TACAAACCAGGGAAAACGCG+AGG | + | chr4_2:57228346-57228365 | None:intergenic | 50.0% | |
| ! | CAAGAAGGGCATGGAGAAAC+TGG | + | chr4_2:57229338-57229357 | None:intergenic | 50.0% |
| !! | TCAGAGGGGGTATCAATTCC+AGG | + | chr4_2:57229444-57229463 | None:intergenic | 50.0% |
| TCGGACAAGACTTTCAGAGG+GGG | + | chr4_2:57229457-57229476 | None:intergenic | 50.0% | |
| CCATCGGACAAGACTTTCAG+AGG | + | chr4_2:57229460-57229479 | None:intergenic | 50.0% | |
| ! | CCTCTGAAAGTCTTGTCCGA+TGG | - | chr4_2:57229457-57229476 | Msa0609750:intron | 50.0% |
| GTCTTGTCCGATGGAAGTTG+CGG | - | chr4_2:57229466-57229485 | Msa0609750:intron | 50.0% | |
| ATTCCAGCCGCAACTTCCAT+CGG | + | chr4_2:57229476-57229495 | None:intergenic | 50.0% | |
| GTAATTCGCAGCTTTCCTCC+TGG | - | chr4_2:57229583-57229602 | Msa0609750:three_prime_UTR | 50.0% | |
| CACCGGACAACATTCAAAGC+TGG | - | chr4_2:57230006-57230025 | Msa0609750:intron | 50.0% | |
| CGGACAACATTCAAAGCTGG+TGG | - | chr4_2:57230009-57230028 | Msa0609750:intron | 50.0% | |
| CGTTATCGCCTTCTTACTGC+AGG | - | chr4_2:57230052-57230071 | Msa0609750:three_prime_UTR | 50.0% | |
| TTGATGCGCCTGCAGTAAGA+AGG | + | chr4_2:57230063-57230082 | None:intergenic | 50.0% | |
| CAGCAGGATCTATCGTCCTT+AGG | + | chr4_2:57230126-57230145 | None:intergenic | 50.0% | |
| CTAAGGACGATAGATCCTGC+TGG | - | chr4_2:57230124-57230143 | Msa0609750:intron | 50.0% | |
| ! | TCCTGCTGGTGTTTTCCTTG+AGG | - | chr4_2:57230138-57230157 | Msa0609750:intron | 50.0% |
| ! | GGTGTTTTCCTTGAGGCAGT+TGG | - | chr4_2:57230145-57230164 | Msa0609750:intron | 50.0% |
| TTGGTTCACCAACTGCCTCA+AGG | + | chr4_2:57230156-57230175 | None:intergenic | 50.0% | |
| ACCATGTTGACAGATGGGAC+TGG | - | chr4_2:57230223-57230242 | Msa0609750:intron | 50.0% | |
| CCATGTTGACAGATGGGACT+GGG | - | chr4_2:57230224-57230243 | Msa0609750:intron | 50.0% | |
| CATGTTGACAGATGGGACTG+GGG | - | chr4_2:57230225-57230244 | Msa0609750:intron | 50.0% | |
| ATGTTGACAGATGGGACTGG+GGG | - | chr4_2:57230226-57230245 | Msa0609750:intron | 50.0% | |
| TCAAGTGCGTCTGGAAATCC+TGG | - | chr4_2:57230253-57230272 | Msa0609750:intron | 50.0% | |
| ! | GGATCAGGTTGCCATCTGTT+TGG | + | chr4_2:57230489-57230508 | None:intergenic | 50.0% |
| GGATCTGCTTCTACAGGATC+AGG | + | chr4_2:57230504-57230523 | None:intergenic | 50.0% | |
| GGGAAGCAGAAACCAAAGGA+AGG | - | chr4_2:57230530-57230549 | Msa0609750:intron | 50.0% | |
| ! | TGTCTGAGGTGGCTGACTTA+TGG | + | chr4_2:57230930-57230949 | None:intergenic | 50.0% |
| CTTCAACCTCCACACCTAAG+AGG | + | chr4_2:57231053-57231072 | None:intergenic | 50.0% | |
| CATCTACAGACCTGTATCGG+AGG | + | chr4_2:57231132-57231151 | None:intergenic | 50.0% | |
| ! | AGGAGTCATTGGGTACTGCT+AGG | + | chr4_2:57231357-57231376 | None:intergenic | 50.0% |
| ACAGGTTCAGGCAGGTTAAG+GGG | + | chr4_2:57231921-57231940 | None:intergenic | 50.0% | |
| CAACAGGTTCAGGCAGGTTA+AGG | + | chr4_2:57231923-57231942 | None:intergenic | 50.0% | |
| TCGGAGAGAAGCTTGTCAAC+AGG | + | chr4_2:57231939-57231958 | None:intergenic | 50.0% | |
| AAACACCCCGTAAGCTTCAG+TGG | - | chr4_2:57231985-57232004 | Msa0609750:three_prime_UTR | 50.0% | |
| AGCAGCTGCAAGGTCTTTAG+AGG | + | chr4_2:57232345-57232364 | None:intergenic | 50.0% | |
| GTATCCCAATAGCAGCTGCA+AGG | + | chr4_2:57232355-57232374 | None:intergenic | 50.0% | |
| !! | CGCGGCTGTGTTTTTGTAAC+AGG | - | chr4_2:57232629-57232648 | Msa0609750:intron | 50.0% |
| GCTGAGACAAGTAGGAATGG+AGG | - | chr4_2:57232717-57232736 | Msa0609750:intron | 50.0% | |
| GAGACAAGTAGGAATGGAGG+CGG | - | chr4_2:57232720-57232739 | Msa0609750:intron | 50.0% | |
| GGCAATGCTCAGGAACTTCT+TGG | - | chr4_2:57232747-57232766 | Msa0609750:three_prime_UTR | 50.0% | |
| GGAACTTCTTGGAGGTGATG+AGG | - | chr4_2:57232758-57232777 | Msa0609750:three_prime_UTR | 50.0% | |
| ACTTCTTGGAGGTGATGAGG+AGG | - | chr4_2:57232761-57232780 | Msa0609750:three_prime_UTR | 50.0% | |
| TGAGGAGGAAGACAGATCTG+TGG | - | chr4_2:57232776-57232795 | Msa0609750:three_prime_UTR | 50.0% | |
| TCAGGGGATCATCCTCATCA+GGG | - | chr4_2:57234012-57234031 | Msa0609750:CDS | 50.0% | |
| TGGTGTTCAACTCACTTGCG+TGG | + | chr4_2:57234047-57234066 | None:intergenic | 50.0% | |
| GGAGATTGTTATGGCAAGCG+AGG | + | chr4_2:57234169-57234188 | None:intergenic | 50.0% | |
| TAGTTAGGCTCTCCCTCAAG+CGG | - | chr4_2:57234217-57234236 | Msa0609750:intron | 50.0% | |
| AGACTGTCGACACAATGAGC+CGG | - | chr4_2:57234322-57234341 | Msa0609750:intron | 50.0% | |
| !! | CAAGGTTGATGGTTCGACGA+AGG | + | chr4_2:57234354-57234373 | None:intergenic | 50.0% |
| GAGACCATTGTTGGGTCATG+AGG | - | chr4_2:57234373-57234392 | Msa0609750:intron | 50.0% | |
| TTCGCCTCATGACCCAACAA+TGG | + | chr4_2:57234380-57234399 | None:intergenic | 50.0% | |
| ! | GCTATGAGGAAACCGACTCT+TGG | - | chr4_2:57234757-57234776 | Msa0609750:CDS | 50.0% |
| ! | AGGAAACCGACTCTTGGCAT+GGG | - | chr4_2:57234763-57234782 | Msa0609750:CDS | 50.0% |
| TACTCACCCATGCCAAGAGT+CGG | + | chr4_2:57234772-57234791 | None:intergenic | 50.0% | |
| GCCACACAATCTCTTCTCGG+CGG | - | chr4_2:57227508-57227527 | Msa0609750:three_prime_UTR | 55.0% | |
| ACCGCCGAGAAGAGATTGTG+TGG | + | chr4_2:57227512-57227531 | None:intergenic | 55.0% | |
| CCCGACATGCCTTCTGTAAG+AGG | - | chr4_2:57227946-57227965 | Msa0609750:intron | 55.0% | |
| ! | GCACCGACACCTCTTACAGA+AGG | + | chr4_2:57227958-57227977 | None:intergenic | 55.0% |
| !! | CTGTAAGAGGTGTCGGTGCT+AGG | - | chr4_2:57227959-57227978 | Msa0609750:intron | 55.0% |
| AGGGAAAACGCGAGGAAGTG+TGG | + | chr4_2:57228338-57228357 | None:intergenic | 55.0% | |
| ! | ACACTTCCTCGCGTTTTCCC+TGG | - | chr4_2:57228337-57228356 | Msa0609750:intron | 55.0% |
| AGGGCATGGAGAAACTGGAG+AGG | + | chr4_2:57229333-57229352 | None:intergenic | 55.0% | |
| GCCTCAAGGAAAACACCAGC+AGG | + | chr4_2:57230142-57230161 | None:intergenic | 55.0% | |
| CCCAGTCCCATCTGTCAACA+TGG | + | chr4_2:57230227-57230246 | None:intergenic | 55.0% | |
| GGGGGAAATTCAAGTGCGTC+TGG | - | chr4_2:57230244-57230263 | Msa0609750:intron | 55.0% | |
| TGCCTTTGCCCTCTTAGGTG+TGG | - | chr4_2:57231041-57231060 | Msa0609750:intron | 55.0% | |
| CTCCACACCTAAGAGGGCAA+AGG | + | chr4_2:57231046-57231065 | None:intergenic | 55.0% | |
| CTTTGCCCTCTTAGGTGTGG+AGG | - | chr4_2:57231044-57231063 | Msa0609750:intron | 55.0% | |
| GCTTGTCAACAGGTTCAGGC+AGG | + | chr4_2:57231929-57231948 | None:intergenic | 55.0% | |
| !! | GGGTGTCATTGCAGAGTCGT+CGG | - | chr4_2:57232650-57232669 | Msa0609750:intron | 55.0% |
| !! | GGTGTCATTGCAGAGTCGTC+GGG | - | chr4_2:57232651-57232670 | Msa0609750:intron | 55.0% |
| ! | GTGTCATTGCAGAGTCGTCG+GGG | - | chr4_2:57232652-57232671 | Msa0609750:intron | 55.0% |
| TGTCATTGCAGAGTCGTCGG+GGG | - | chr4_2:57232653-57232672 | Msa0609750:intron | 55.0% | |
| GGAAGACAGATCTGTGGCCT+CGG | - | chr4_2:57232782-57232801 | Msa0609750:three_prime_UTR | 55.0% | |
| GCTTGTCTTGATGCAGCACG+AGG | + | chr4_2:57233968-57233987 | None:intergenic | 55.0% | |
| CTCAGGGGATCATCCTCATC+AGG | - | chr4_2:57234011-57234030 | Msa0609750:CDS | 55.0% | |
| TGGTTGCTCTTGCCCTGATG+AGG | + | chr4_2:57234027-57234046 | None:intergenic | 55.0% | |
| AGTTAGGCTCTCCCTCAAGC+GGG | - | chr4_2:57234218-57234237 | Msa0609750:intron | 55.0% | |
| GGTTCGACGAAGGGTTCAAC+CGG | + | chr4_2:57234344-57234363 | None:intergenic | 55.0% | |
| ! | GAGGAAACCGACTCTTGGCA+TGG | - | chr4_2:57234762-57234781 | Msa0609750:CDS | 55.0% |
| CAATCTCTTCTCGGCGGTGC+TGG | - | chr4_2:57227514-57227533 | Msa0609750:three_prime_UTR | 60.0% | |
| !! | GTCGGTGCTAGGAAGCCTTG+TGG | - | chr4_2:57227970-57227989 | Msa0609750:intron | 60.0% |
| TGTCCGATGGAAGTTGCGGC+TGG | - | chr4_2:57229470-57229489 | Msa0609750:intron | 60.0% | |
| GTCATTGCAGAGTCGTCGGG+GGG | - | chr4_2:57232654-57232673 | Msa0609750:intron | 60.0% | |
| AGTAGGAATGGAGGCGGCAG+TGG | - | chr4_2:57232726-57232745 | Msa0609750:intron | 60.0% | |
| TTGGGTCATGAGGGGAGCTC+AGG | - | chr4_2:57233994-57234013 | Msa0609750:CDS | 60.0% | |
| TGGGTCATGAGGGGAGCTCA+GGG | - | chr4_2:57233995-57234014 | Msa0609750:CDS | 60.0% | |
| GCTGAGTGCAGTGGCAATGG+CGG | + | chr4_2:57234271-57234290 | None:intergenic | 60.0% | |
| GCCATTGCCACTGCACTCAG+CGG | - | chr4_2:57234270-57234289 | Msa0609750:intron | 60.0% | |
| CCATTGCCACTGCACTCAGC+GGG | - | chr4_2:57234271-57234290 | Msa0609750:intron | 60.0% | |
| AGGCGGCAGTGGCAATGCTC+AGG | - | chr4_2:57232737-57232756 | Msa0609750:intron | 65.0% | |
| GGGTCATGAGGGGAGCTCAG+GGG | - | chr4_2:57233996-57234015 | Msa0609750:CDS | 65.0% | |
| CCCGCTGAGTGCAGTGGCAA+TGG | + | chr4_2:57234274-57234293 | None:intergenic | 65.0% | |
| GTGTGTCCCGCTGAGTGCAG+TGG | + | chr4_2:57234280-57234299 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 57227136 | 57235177 | 57227136 | ID=Msa0609750;Name=Msa0609750 |
| chr4_2 | mRNA | 57227136 | 57235177 | 57227136 | ID=Msa0609750-mRNA-1;Parent=Msa0609750;Name=Msa0609750-mRNA-1;_AED=0.04;_eAED=0.04;_QI=270|1|1|1|0.87|0.76|17|2658|187 |
| chr4_2 | exon | 57227136 | 57227639 | 57227136 | ID=Msa0609750-mRNA-1:exon:14871;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57228667 | 57228841 | 57228667 | ID=Msa0609750-mRNA-1:exon:14870;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57228955 | 57229023 | 57228955 | ID=Msa0609750-mRNA-1:exon:14869;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57229471 | 57229662 | 57229471 | ID=Msa0609750-mRNA-1:exon:14868;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57229895 | 57229976 | 57229895 | ID=Msa0609750-mRNA-1:exon:14867;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57230050 | 57230138 | 57230050 | ID=Msa0609750-mRNA-1:exon:14866;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57230282 | 57230401 | 57230282 | ID=Msa0609750-mRNA-1:exon:14865;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57231173 | 57231255 | 57231173 | ID=Msa0609750-mRNA-1:exon:14864;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57231363 | 57231477 | 57231363 | ID=Msa0609750-mRNA-1:exon:14863;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57231618 | 57231819 | 57231618 | ID=Msa0609750-mRNA-1:exon:14862;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57231930 | 57232346 | 57231930 | ID=Msa0609750-mRNA-1:exon:14861;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57232745 | 57232989 | 57232745 | ID=Msa0609750-mRNA-1:exon:14860;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57233112 | 57233183 | 57233112 | ID=Msa0609750-mRNA-1:exon:14859;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57233335 | 57233624 | 57233335 | ID=Msa0609750-mRNA-1:exon:14858;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57233944 | 57234186 | 57233944 | ID=Msa0609750-mRNA-1:exon:14857;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57234516 | 57234608 | 57234516 | ID=Msa0609750-mRNA-1:exon:14856;Parent=Msa0609750-mRNA-1 |
| chr4_2 | exon | 57234677 | 57235177 | 57234677 | ID=Msa0609750-mRNA-1:exon:14855;Parent=Msa0609750-mRNA-1 |
| chr4_2 | five_prime_UTR | 57234908 | 57235177 | 57234908 | ID=Msa0609750-mRNA-1:five_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | CDS | 57234677 | 57234907 | 57234677 | ID=Msa0609750-mRNA-1:cds;Parent=Msa0609750-mRNA-1 |
| chr4_2 | CDS | 57234516 | 57234608 | 57234516 | ID=Msa0609750-mRNA-1:cds;Parent=Msa0609750-mRNA-1 |
| chr4_2 | CDS | 57233947 | 57234186 | 57233947 | ID=Msa0609750-mRNA-1:cds;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57233944 | 57233946 | 57233944 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57233335 | 57233624 | 57233335 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57233112 | 57233183 | 57233112 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57232745 | 57232989 | 57232745 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57231930 | 57232346 | 57231930 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57231618 | 57231819 | 57231618 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57231363 | 57231477 | 57231363 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57231173 | 57231255 | 57231173 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57230282 | 57230401 | 57230282 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57230050 | 57230138 | 57230050 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57229895 | 57229976 | 57229895 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57229471 | 57229662 | 57229471 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57228955 | 57229023 | 57228955 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57228667 | 57228841 | 57228667 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| chr4_2 | three_prime_UTR | 57227136 | 57227639 | 57227136 | ID=Msa0609750-mRNA-1:three_prime_utr;Parent=Msa0609750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
