AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0380620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380620 MtrunA17_Chr3g0134191 93.789 161 2 1 9 161 746 906 7.55e-95 296
Msa0380620 MtrunA17_Chr1g0153061 80.745 161 23 1 9 161 745 905 5.87e-78 251
Msa0380620 MtrunA17_Chr4g0053211 55.280 161 63 2 9 161 755 914 1.05e-46 163
Msa0380620 MtrunA17_Chr5g0427481 49.580 119 45 2 44 147 819 937 7.51e-26 103
Msa0380620 MtrunA17_Chr3g0132911 43.023 172 76 3 5 161 327 491 1.18e-25 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380620 AT5G47820.2 80.124 161 24 1 9 161 757 917 9.02e-81 259
Msa0380620 AT5G47820.1 80.124 161 24 1 9 161 757 917 9.02e-81 259
Msa0380620 AT3G50240.2 44.848 165 78 2 5 161 758 917 3.44e-30 116
Msa0380620 AT3G50240.4 45.342 161 75 2 5 157 753 908 1.78e-29 114
Msa0380620 AT3G50240.1 45.342 161 75 2 5 157 758 913 1.82e-29 114
Msa0380620 AT3G50240.3 45.342 161 75 2 5 157 656 811 1.90e-29 114
Msa0380620 AT5G60930.3 38.272 162 78 2 5 151 796 950 3.50e-25 102
Msa0380620 AT5G60930.1 38.272 162 78 2 5 151 796 950 3.70e-25 102
Msa0380620 AT5G60930.2 38.272 162 78 2 5 151 796 950 3.75e-25 102

Find 312 sgRNAs with CRISPR-Local

Find 904 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATTTGATCATGTTTA+TGG 0.105027 3_1:+82426892 Msa0380620:five_prime_UTR
GGTTGGTAGGTCAAGTATTT+AGG 0.116210 3_1:-82437864 None:intergenic
TGCAATTAGCTTTAGGTAAA+TGG 0.140491 3_1:-82439880 None:intergenic
TACTCACAACAGGCTTATTT+TGG 0.158232 3_1:-82429821 None:intergenic
ATTATTCCAAATTTGGATTT+AGG 0.160817 3_1:+82437600 Msa0380620:three_prime_UTR
CTTGAGGTATTATTCCTATT+TGG 0.171128 3_1:-82427152 None:intergenic
TGTGAACATTATTCCAAATT+TGG 0.172926 3_1:+82437593 Msa0380620:three_prime_UTR
TTAGATTCTGCCACAGTTCT+TGG 0.194596 3_1:+82439510 Msa0380620:three_prime_UTR
GTATACTGTCTCAATGAATT+TGG 0.215767 3_1:-82438542 None:intergenic
TTGCATACTTCAAAGTGTTT+AGG 0.230610 3_1:-82429782 None:intergenic
ACTTCATTGCAGACAGGTTC+TGG 0.232892 3_1:+82427090 Msa0380620:intron
TTTAAAGAAGGTTTCCAAAT+AGG 0.243144 3_1:+82427138 Msa0380620:five_prime_UTR
AGCTTCTCGTCCGCGATTAA+TGG 0.248597 3_1:-82425639 None:intergenic
AGAAGAAGTAAGAGATTTAC+TGG 0.249543 3_1:+82427372 Msa0380620:five_prime_UTR
ATAATTGGTTGGGTAGAAAA+AGG 0.249921 3_1:-82437839 None:intergenic
TCAAGTATTTAGGGTATAAT+TGG 0.251036 3_1:-82437854 None:intergenic
CAACAAAATTGGGAGCTTAA+AGG 0.252629 3_1:+82427191 Msa0380620:five_prime_UTR
AATTATTAGAGTGCTGTTTC+AGG 0.254336 3_1:+82437569 Msa0380620:exon
TTTGTCATAACTACTGTATA+TGG 0.276564 3_1:+82439404 Msa0380620:three_prime_UTR
TGCATACTTCAAAGTGTTTA+GGG 0.277281 3_1:-82429781 None:intergenic
TAACAACTGCAATTAGCTTT+AGG 0.279784 3_1:-82439887 None:intergenic
AAGCTGTAACATTAGTGTTT+TGG 0.286888 3_1:+82439756 Msa0380620:three_prime_UTR
AGCTAATTGCAGTTGTTAAC+TGG 0.307678 3_1:+82439892 Msa0380620:three_prime_UTR
CATAGATTGAAGCAAATTCT+TGG 0.310509 3_1:-82436935 None:intergenic
TGAAGACGGATGGGCTTAAA+AGG 0.312540 3_1:+82430706 Msa0380620:five_prime_UTR
GATTGTGTAGCCGTCGTTGC+TGG 0.318677 3_1:+82425675 Msa0380620:five_prime_UTR
AACAATAATCTTACAGAAGC+TGG 0.319290 3_1:-82437469 None:intergenic
GATCAAAGAGTCTAATGTTT+TGG 0.321430 3_1:-82438181 None:intergenic
GATGTTAAATACACATTTCC+AGG 0.323820 3_1:-82439591 None:intergenic
CAAACTTCTGCAAAATAGTA+TGG 0.325879 3_1:+82430977 Msa0380620:five_prime_UTR
GTAAGTTTACTGTCCCTATA+TGG 0.334007 3_1:-82428638 None:intergenic
GTTGGTAGGTCAAGTATTTA+GGG 0.335877 3_1:-82437863 None:intergenic
CCATGTGCCTAGGATAATTC+TGG 0.338496 3_1:-82439021 None:intergenic
GACCTTCAGAACACACAAAA+AGG 0.344273 3_1:-82439621 None:intergenic
ACTTATTATATAGGGTCTTA+AGG 0.346359 3_1:+82430378 Msa0380620:intron
CATTTGTAGATCAGGGTAGA+AGG 0.346446 3_1:+82438657 Msa0380620:three_prime_UTR
AAAACATACACCATGGGAAC+TGG 0.346642 3_1:+82427114 Msa0380620:five_prime_UTR
AACAAAAGATATTGCTTGCT+TGG 0.347626 3_1:+82439478 Msa0380620:three_prime_UTR
CAAGTAAGAATGCTTTGAAT+AGG 0.352029 3_1:+82437512 Msa0380620:CDS
TCTCATCACTATACATCAAC+AGG 0.357866 3_1:+82438511 Msa0380620:three_prime_UTR
AATGGCAACCAAGAGGTTAA+AGG 0.358759 3_1:+82434290 Msa0380620:five_prime_UTR
ATCCTAGGCACATGGCAAAA+TGG 0.359181 3_1:+82439029 Msa0380620:three_prime_UTR
AAATCAACATACCTCGATAA+AGG 0.363137 3_1:-82427241 None:intergenic
CCCTTGGTTTCTTCTAATGT+TGG 0.364565 3_1:-82439550 None:intergenic
ACAAATGGAAATGGAACAAA+TGG 0.365198 3_1:+82436169 Msa0380620:exon
AATGGTGTTATAACCCTTGC+AGG 0.369429 3_1:+82427490 Msa0380620:five_prime_UTR
TACTGTATATGGAACATCTT+AGG 0.369652 3_1:+82439415 Msa0380620:three_prime_UTR
GCAAATCCATTCTTCCCTCT+TGG 0.370375 3_1:-82436593 None:intergenic
CACTTTCCAGTTGCAACAAA+TGG 0.372092 3_1:+82436154 Msa0380620:intron
CATTGCTACAAGTGAATTAG+AGG 0.375403 3_1:-82436827 None:intergenic
GCGCATTTGCTCTAATGTTA+TGG 0.376904 3_1:-82428303 None:intergenic
AACTAACTCTCGTACTACTA+TGG 0.377188 3_1:+82425572 Msa0380620:five_prime_UTR
AGAAAGTAATGTGGTTGAAG+AGG 0.378318 3_1:-82425435 None:intergenic
GCTATAATTCAGGTGCAAAT+TGG 0.379966 3_1:+82426859 Msa0380620:intron
AATGGCTGCTTGCCTCGAAC+AGG 0.382303 3_1:+82427546 Msa0380620:five_prime_UTR
CCAGTTGCAACAAATGGAAA+TGG 0.382635 3_1:+82436160 Msa0380620:intron
ATCGGCATCATTTGTAGATC+AGG 0.383970 3_1:+82438649 Msa0380620:three_prime_UTR
GAATAATGCCGTCCAGATCT+TGG 0.391033 3_1:+82439376 Msa0380620:three_prime_UTR
AACAAGAGGCAGAACAGTTT+CGG 0.393031 3_1:+82432104 Msa0380620:five_prime_UTR
AGAGAGAGTGTGTGTGAAAG+AGG 0.394989 3_1:-82425411 None:intergenic
GCGAGAAAGAGATTGTCTTT+TGG 0.396616 3_1:+82431640 Msa0380620:intron
GGATCCTCAAGTAGAGCAAC+TGG 0.397008 3_1:+82427568 Msa0380620:five_prime_UTR
TTCATTGACAGCTGCCCAAT+GGG 0.397468 3_1:-82438760 None:intergenic
TGTGTTTCTCCACTTGTTGA+TGG 0.397899 3_1:+82426952 Msa0380620:five_prime_UTR
GACTCTTTGATCTCAACTTA+AGG 0.398057 3_1:+82438192 Msa0380620:three_prime_UTR
TTGCCTGCTGTTTCATTCAC+TGG 0.400500 3_1:-82430756 None:intergenic
TTGAAGAAGTAGCAAAAGAA+TGG 0.401593 3_1:+82430949 Msa0380620:five_prime_UTR
TGCTACTTCTTCAATTTCCC+TGG 0.407848 3_1:-82430940 None:intergenic
AACCATAAAATAATAATTGA+TGG 0.408636 3_1:-82438397 None:intergenic
GGATGAAATACAGTCTATAA+AGG 0.409059 3_1:+82431969 Msa0380620:five_prime_UTR
GCATGATATCGAAGAACATT+AGG 0.410350 3_1:-82437758 None:intergenic
CCTCTCTCGCTCTTCTGCTT+CGG 0.410732 3_1:-82436863 None:intergenic
AATGCTACTGTTCTCGCATA+TGG 0.411595 3_1:+82426991 Msa0380620:five_prime_UTR
GGTTTCTTCTAATGTTGGTA+TGG 0.413238 3_1:-82439545 None:intergenic
GGATAATCAGCTACTGTGAT+AGG 0.414656 3_1:-82430735 None:intergenic
AAGCAACTCCTTTAACCTCT+TGG 0.415222 3_1:-82434298 None:intergenic
GAAGAAGAAGCAAGAGAGTC+AGG 0.417480 3_1:+82431894 Msa0380620:five_prime_UTR
AGGTGTTCATGTTCCATATA+GGG 0.417594 3_1:+82428625 Msa0380620:five_prime_UTR
TGGCTCATCTGAGGAAGTTC+AGG 0.419684 3_1:+82430028 Msa0380620:five_prime_UTR
GGGGTAGTTGTGGAAAGAAA+AGG 0.421601 3_1:-82425387 None:intergenic
TCAGAACGAGCTAAAAGAAC+AGG 0.422378 3_1:+82428416 Msa0380620:five_prime_UTR
GATGTCTCACGAATTTGTAT+TGG 0.427594 3_1:-82427466 None:intergenic
GCAATTGTAGGACAAGCTTC+TGG 0.428631 3_1:+82438790 Msa0380620:three_prime_UTR
ACAACAACTGGAGTGTTTGC+AGG 0.430562 3_1:+82429983 Msa0380620:five_prime_UTR
AGCAGTAGTTGTTGTCCTTA+CGG 0.430973 3_1:+82425334 Msa0380620:five_prime_UTR
TAGAAATAAAATTAAAATTG+AGG 0.433755 3_1:+82438313 Msa0380620:three_prime_UTR
GTCTCACGAATTTGTATTGG+CGG 0.434962 3_1:-82427463 None:intergenic
GGTGTATATTTGAGTTGTCT+TGG 0.435170 3_1:-82438599 None:intergenic
TTCTACTAGTTCAAGACTAC+TGG 0.435695 3_1:-82438143 None:intergenic
CTTCATTGCAGACAGGTTCT+GGG 0.436319 3_1:+82427091 Msa0380620:intron
TGTCACAACACTAAAAGAAA+TGG 0.437143 3_1:+82427528 Msa0380620:five_prime_UTR
TTATAATTTCATGTTATATG+AGG 0.437198 3_1:-82438117 None:intergenic
CTGTGTTTGTCCATCAGAGT+TGG 0.437241 3_1:-82431684 None:intergenic
GACAAGCTTCTGGCAAGTTA+TGG 0.439848 3_1:+82438800 Msa0380620:three_prime_UTR
TGGAATCAGTTGCGCTCAAT+GGG 0.440987 3_1:+82436907 Msa0380620:CDS
AAGTAAGAATGCTTTGAATA+GGG 0.441026 3_1:+82437513 Msa0380620:CDS
GTAGTTGCAGAAGAAGTATA+TGG 0.441768 3_1:+82439344 Msa0380620:three_prime_UTR
TTGGAATCAGTTGCGCTCAA+TGG 0.445298 3_1:+82436906 Msa0380620:CDS
CTTGTTGATGGTTTGTTCCA+AGG 0.445438 3_1:+82426964 Msa0380620:five_prime_UTR
ATTTGTATTGGCGGCTTCCC+AGG 0.445801 3_1:-82427454 None:intergenic
CCGAAGCAGAAGAGCGAGAG+AGG 0.447265 3_1:+82436863 Msa0380620:CDS
ATATCAACAGGTGCCAACTC+TGG 0.448213 3_1:+82437305 Msa0380620:intron
TAACATTACCAAGTGCTAGA+AGG 0.448478 3_1:-82428568 None:intergenic
GAACAGTAGCATTATATCCT+TGG 0.448555 3_1:-82426981 None:intergenic
CATGTCACCAAGTGCAAGAA+TGG 0.449209 3_1:+82436768 Msa0380620:CDS
ACTTCCAGCCGAGACACTTC+AGG 0.451633 3_1:+82434333 Msa0380620:five_prime_UTR
TATACACCAGGGGTTGCTAA+TGG 0.462117 3_1:+82438614 Msa0380620:three_prime_UTR
GATATTGACAAGTTTATTGA+GGG 0.463402 3_1:-82437885 None:intergenic
CTGCATTTAGTAGATCTTGC+CGG 0.464657 3_1:+82428392 Msa0380620:five_prime_UTR
ATCGCGGACGAGAAGCTTCA+AGG 0.465166 3_1:+82425645 Msa0380620:five_prime_UTR
TGTAAATGAGTTTGCTGCTA+AGG 0.465290 3_1:+82436559 Msa0380620:CDS
AGAGTGTGTGTGAAAGAGGA+GGG 0.465517 3_1:-82425407 None:intergenic
CTTATATTATAATTGTCATA+AGG 0.467013 3_1:+82438458 Msa0380620:three_prime_UTR
TCCTCAGCATTAATATCAGC+AGG 0.468259 3_1:-82429756 None:intergenic
GATCAAATCAAAGAACTTGT+CGG 0.470192 3_1:+82437358 Msa0380620:CDS
GATCATGTTTATGGAAGCAC+TGG 0.470732 3_1:+82426901 Msa0380620:five_prime_UTR
AGTGGCTATTGCAATTCAAA+TGG 0.470995 3_1:+82438845 Msa0380620:three_prime_UTR
GCAGAGCTTTGTGCTCGTGC+CGG 0.471447 3_1:+82430005 Msa0380620:five_prime_UTR
TATTTGAGTTGTCTTGGTAC+TGG 0.472357 3_1:-82438593 None:intergenic
TGGACAAACACAGAAATTAG+AGG 0.472376 3_1:+82431694 Msa0380620:five_prime_UTR
AAGATTCTTGTATCAAATCC+TGG 0.472683 3_1:+82439573 Msa0380620:three_prime_UTR
CTCATTTACATGCTTCAGAA+TGG 0.473414 3_1:-82436546 None:intergenic
CGTCGTTGCTGGGAAGCCTC+AGG 0.474935 3_1:+82425686 Msa0380620:five_prime_UTR
CTCTAATGTTATGGTGAAGA+TGG 0.476762 3_1:-82428294 None:intergenic
TGCACTTGGTGACATGGAGG+AGG 0.477010 3_1:-82436761 None:intergenic
TGATATTGACAAGTTTATTG+AGG 0.477167 3_1:-82437886 None:intergenic
CTCTAATTCACTTGTAGCAA+TGG 0.478035 3_1:+82436828 Msa0380620:CDS
AGGCAGAACAGTTTCGGCAG+TGG 0.478814 3_1:+82432110 Msa0380620:five_prime_UTR
GAAAGTAATGTGGTTGAAGA+GGG 0.479276 3_1:-82425434 None:intergenic
GGGTAGTTGTGGAAAGAAAA+GGG 0.481237 3_1:-82425386 None:intergenic
GCATAAAACAAGTGTAATGT+TGG 0.481790 3_1:+82437779 Msa0380620:three_prime_UTR
TTTCATTGACAGCTGCCCAA+TGG 0.482398 3_1:-82438761 None:intergenic
AATCCATTCTTCCCTCTTGG+AGG 0.483296 3_1:-82436590 None:intergenic
ATGGGAACTGGGTTTAAAGA+AGG 0.483558 3_1:+82427126 Msa0380620:five_prime_UTR
CAAATTCGTGAGACATCAAA+TGG 0.484271 3_1:+82427472 Msa0380620:five_prime_UTR
ATCAATTCTGAAAGTTTCCA+TGG 0.484290 3_1:-82438880 None:intergenic
TGGAAATACATACCATTCTC+TGG 0.484324 3_1:-82432538 None:intergenic
GAAATAACAGCGCTAGGTAC+AGG 0.484495 3_1:+82439057 Msa0380620:three_prime_UTR
AACTAATATGAGCTTAGATC+TGG 0.484768 3_1:-82437710 None:intergenic
GAGGGAAGAATGGATTTGCC+AGG 0.485980 3_1:+82436597 Msa0380620:CDS
AAGGTGTTCATGTTCCATAT+AGG 0.488050 3_1:+82428624 Msa0380620:five_prime_UTR
TTCTTTAAACCCAGTTCCCA+TGG 0.488057 3_1:-82427124 None:intergenic
ACAGTCTATAAAGGCCCAAA+AGG 0.488577 3_1:+82431978 Msa0380620:five_prime_UTR
TATTTAGGGTATAATTGGTT+GGG 0.489262 3_1:-82437849 None:intergenic
AATGCATTATCAACCTGGAT+TGG 0.490107 3_1:-82427609 None:intergenic
CAGTCTGAGATGAAGCTGTT+TGG 0.490976 3_1:+82431458 Msa0380620:intron
AATCTTGCTGCCAACTCTGA+TGG 0.492420 3_1:+82431674 Msa0380620:five_prime_UTR
TACTGTTCTCGCATATGGTC+AGG 0.495777 3_1:+82426996 Msa0380620:five_prime_UTR
ACAATAATCTTACAGAAGCT+GGG 0.498556 3_1:-82437468 None:intergenic
CATTCTTGCACTTGGTGACA+TGG 0.500172 3_1:-82436767 None:intergenic
GTATTTAGGGTATAATTGGT+TGG 0.501946 3_1:-82437850 None:intergenic
CTAATTCAAGGAGACGGTTG+TGG 0.501954 3_1:-82438365 None:intergenic
TTTAAATCAGCGCCAGAGAA+TGG 0.502237 3_1:+82432526 Msa0380620:five_prime_UTR
AAGATTATTGTTACTTTGTG+AGG 0.503656 3_1:+82437480 Msa0380620:CDS
ATTCTCGCCATTCTTGCACT+TGG 0.504488 3_1:-82436775 None:intergenic
CCATGTCCTTCTCCCAGAGT+TGG 0.505519 3_1:-82437318 None:intergenic
GGAAGTGTGCGGCAACGTAC+AGG 0.506082 3_1:+82439436 Msa0380620:three_prime_UTR
TATCAACAGGTGCCAACTCT+GGG 0.509252 3_1:+82437306 Msa0380620:intron
TGGAATCCTAGTCTAATTCA+AGG 0.509810 3_1:-82438377 None:intergenic
TAATGGCTTAACGAGGGAAT+CGG 0.512593 3_1:+82438631 Msa0380620:three_prime_UTR
TTGATACAAGAATCTTCCCT+TGG 0.513039 3_1:-82439566 None:intergenic
GAGCTTTGTGCTCGTGCCGG+TGG 0.514259 3_1:+82430008 Msa0380620:five_prime_UTR
AGCAAAACAGAAACTGCAAA+TGG 0.515331 3_1:+82427409 Msa0380620:five_prime_UTR
TATGACAATTATAATATAAG+TGG 0.517188 3_1:-82438455 None:intergenic
AGACCCACCAGAATTATCCT+AGG 0.518232 3_1:+82439014 Msa0380620:three_prime_UTR
CAAGTTTATTGAGGGTTGGT+AGG 0.519646 3_1:-82437877 None:intergenic
GCATGAATTGAATAAACGCT+TGG 0.519978 3_1:+82431010 Msa0380620:five_prime_UTR
CCGTCTCCTTGAATTAGACT+AGG 0.520689 3_1:+82438371 Msa0380620:three_prime_UTR
CAGGCGAGCTGCCCTTGCAG+AGG 0.521102 3_1:+82436517 Msa0380620:intron
TGAAGAAGTAGCAAAAGAAT+GGG 0.521852 3_1:+82430950 Msa0380620:five_prime_UTR
AACAAAGGCCTTCTAGCACT+TGG 0.521962 3_1:+82428560 Msa0380620:five_prime_UTR
GAAGTACTCAAACAGCACTT+TGG 0.523229 3_1:+82431494 Msa0380620:five_prime_UTR
TTGTGGATCATTCGAAACTA+AGG 0.523896 3_1:-82438348 None:intergenic
TGAAAGTTGCGGTTCATGTA+CGG 0.523954 3_1:+82425616 Msa0380620:five_prime_UTR
GAGAGTGTGTGTGAAAGAGG+AGG 0.525221 3_1:-82425408 None:intergenic
ATAATATAAGTGGTAAAAGA+AGG 0.525430 3_1:-82438445 None:intergenic
ATTGTGTAGCCGTCGTTGCT+GGG 0.526352 3_1:+82425676 Msa0380620:five_prime_UTR
CATACCTGAAGTGTCTCGGC+TGG 0.526721 3_1:-82434337 None:intergenic
TGTCGCAGAACAAAATGAAA+AGG 0.527088 3_1:+82430474 Msa0380620:five_prime_UTR
AGTCCTCCAAGAGGGAAGAA+TGG 0.528374 3_1:+82436587 Msa0380620:CDS
TTGACAAGTTTATTGAGGGT+TGG 0.528727 3_1:-82437881 None:intergenic
TTATATAGGGTCTTAAGGAA+AGG 0.528771 3_1:+82430383 Msa0380620:intron
ATATGACTGAGCTGCTGAAG+TGG 0.529514 3_1:-82425489 None:intergenic
CTTGGTACTGGTACAGACAT+TGG 0.530252 3_1:-82438581 None:intergenic
TACGGTGTTCATGAAGTTCA+CGG 0.532245 3_1:-82430441 None:intergenic
AGATGAGAAGAGAACAGTGC+AGG 0.532521 3_1:+82431538 Msa0380620:five_prime_UTR
AACAGCAGAACTGTCATGAT+AGG 0.532555 3_1:+82429088 Msa0380620:five_prime_UTR
TATTTCAGATGAAACCCATT+GGG 0.533764 3_1:+82438746 Msa0380620:intron
TACTTGAGGATCCCTGTTCG+AGG 0.535660 3_1:-82427558 None:intergenic
AACAAAACATTCATAACTTG+AGG 0.535778 3_1:-82427168 None:intergenic
GAATGGCTAGCTCCTCTGCA+AGG 0.537326 3_1:-82436529 None:intergenic
TATAGAAACAGCAACTGTGC+TGG 0.538155 3_1:-82438986 None:intergenic
GAGAGCAAGACCGCGCTCAC+AGG 0.539330 3_1:+82438927 Msa0380620:three_prime_UTR
TGCAAAACAGTTAAGGAAGG+AGG 0.540164 3_1:+82432466 Msa0380620:intron
TACTCAAACAGCACTTTGGA+AGG 0.541124 3_1:+82431498 Msa0380620:five_prime_UTR
AATATCAGCAGGACTTATGC+AGG 0.541897 3_1:-82429745 None:intergenic
ATATCAAACCTGTAAAAGCC+TGG 0.541982 3_1:-82428660 None:intergenic
ACATGCATTGTGAAGACGGA+TGG 0.542015 3_1:+82430696 Msa0380620:five_prime_UTR
AACTCTCGTACTACTATGGA+AGG 0.542422 3_1:+82425576 Msa0380620:five_prime_UTR
GTTATATTCAGGTCCTTCAA+AGG 0.543786 3_1:+82434250 Msa0380620:intron
GCTCCCAGTTGCTCTACTTG+AGG 0.544099 3_1:-82427572 None:intergenic
CAAATATGAACAACCAATCC+AGG 0.548254 3_1:+82427596 Msa0380620:five_prime_UTR
TTGAATAGGGAAACAAATGC+TGG 0.549845 3_1:+82437526 Msa0380620:CDS
TTATTTCAGATGAAACCCAT+TGG 0.551898 3_1:+82438745 Msa0380620:intron
AGAACAGTTTCGGCAGTGGA+AGG 0.552559 3_1:+82432114 Msa0380620:five_prime_UTR
TGAAGCAACGAAGAGGCTGC+AGG 0.553318 3_1:+82431948 Msa0380620:five_prime_UTR
GTAAATGAGTTTGCTGCTAA+GGG 0.556725 3_1:+82436560 Msa0380620:CDS
CTGTTTGAGTACTTCAGCAT+CGG 0.557445 3_1:-82431486 None:intergenic
GAAACTGCAAATGGACATGC+AGG 0.559220 3_1:+82427418 Msa0380620:five_prime_UTR
GCAAAACAGTTAAGGAAGGA+GGG 0.559417 3_1:+82432467 Msa0380620:intron
GATGAAAAGAAGCGAAAGGA+AGG 0.559586 3_1:+82428605 Msa0380620:five_prime_UTR
CATTCACTAATCGCGGACGT+TGG 0.560068 3_1:+82436887 Msa0380620:CDS
TGACTTCTGTAGACCCTGCA+AGG 0.563379 3_1:-82427504 None:intergenic
CCAACTCTGGGAGAAGGACA+TGG 0.564711 3_1:+82437318 Msa0380620:CDS
GAAAACTGAAGAAGCTGCAA+TGG 0.567080 3_1:+82434272 Msa0380620:five_prime_UTR
AATGGAAGTGGCAGAAACCA+TGG 0.568916 3_1:+82438863 Msa0380620:three_prime_UTR
AAACATACACCATGGGAACT+GGG 0.568974 3_1:+82427115 Msa0380620:five_prime_UTR
TGGTGAAGATGGCATGAGAT+CGG 0.569772 3_1:-82428283 None:intergenic
TGTGCCTAGGATAATTCTGG+TGG 0.571185 3_1:-82439018 None:intergenic
AAATCATACCTGAAGTGTCT+CGG 0.572405 3_1:-82434341 None:intergenic
GTTCATGAAGTTCACGGCAA+AGG 0.572612 3_1:-82430435 None:intergenic
TAAACGCTTGGAGCAGAAAG+AGG 0.572986 3_1:+82431022 Msa0380620:five_prime_UTR
ATCAGCTACTGTGATAGGTA+AGG 0.573573 3_1:-82430730 None:intergenic
CCAGGAGGAAATTCTTCTGT+AGG 0.573723 3_1:+82439704 Msa0380620:three_prime_UTR
TCATAATGCAGTGAAGGTGA+AGG 0.573837 3_1:+82425302 None:intergenic
TCGTGCCGGTGGCTCATCTG+AGG 0.574385 3_1:+82430019 Msa0380620:five_prime_UTR
CTCGTACTACTATGGAAGGA+GGG 0.574605 3_1:+82425580 Msa0380620:five_prime_UTR
GCATTTGAAATAACAGCGCT+AGG 0.577775 3_1:+82439051 Msa0380620:three_prime_UTR
CGAAGCAGAAGAGCGAGAGA+GGG 0.578566 3_1:+82436864 Msa0380620:CDS
TGGAAATGGAACAAATGGGC+AGG 0.579334 3_1:+82436174 Msa0380620:CDS
TCCTGCTGATATTAATGCTG+AGG 0.579672 3_1:+82429755 Msa0380620:five_prime_UTR
GCAAAGTGAGATGAAGAGAA+AGG 0.580629 3_1:+82437390 Msa0380620:CDS
TATTGCAATTCAAATGGAAG+TGG 0.581195 3_1:+82438851 Msa0380620:three_prime_UTR
GCAGCAAAAGATAAAACAAG+AGG 0.581350 3_1:+82432090 Msa0380620:five_prime_UTR
GGTAATGTTATTAGTGCACT+TGG 0.581743 3_1:+82428581 Msa0380620:five_prime_UTR
GTTAAGCCATTAGCAACCCC+TGG 0.582771 3_1:-82438620 None:intergenic
ACTAGAGAGAGAAAGTAATG+TGG 0.582967 3_1:-82425444 None:intergenic
TATTGGCGGCTTCCCAGGAG+AGG 0.584030 3_1:-82427449 None:intergenic
GCTAAAAGAACAGGGTCTGA+TGG 0.585470 3_1:+82428425 Msa0380620:five_prime_UTR
TGAAAGAGGAGGGGTAGTTG+TGG 0.586326 3_1:-82425397 None:intergenic
CTTCTGGCAAGTTATGGAGG+TGG 0.588190 3_1:+82438806 Msa0380620:three_prime_UTR
ATTTGTAGATCAGGGTAGAA+GGG 0.588611 3_1:+82438658 Msa0380620:three_prime_UTR
CTTTGCAAAACAGTTAAGGA+AGG 0.588800 3_1:+82432463 Msa0380620:intron
TATCCAGTGAATGAAACAGC+AGG 0.594568 3_1:+82430753 Msa0380620:five_prime_UTR
GTTGCATGTTTCCTTTATCG+AGG 0.595513 3_1:+82427230 Msa0380620:five_prime_UTR
GAAGAGAAAGGAAACTGAGA+AGG 0.598657 3_1:+82437402 Msa0380620:CDS
CCTACAGAAGAATTTCCTCC+TGG 0.600464 3_1:-82439704 None:intergenic
GAGTATGAGCAGTAACCGTA+AGG 0.600795 3_1:-82425349 None:intergenic
TTTAGCATTTCACTGGACAT+GGG 0.601576 3_1:-82429954 None:intergenic
CATGCAACTGAAATTCACTC+TGG 0.602675 3_1:-82427215 None:intergenic
CAATAATCTTACAGAAGCTG+GGG 0.604658 3_1:-82437467 None:intergenic
TGTGGCAAAGCCTGTGAGCG+CGG 0.604933 3_1:-82438937 None:intergenic
ATAGGGACAGTAAACTTACC+AGG 0.605220 3_1:+82428642 Msa0380620:five_prime_UTR
CTAAAAGTGAGAGAGCAAGC+TGG 0.606195 3_1:+82437427 Msa0380620:CDS
TCAGGAGTTCATATTAACAA+AGG 0.606497 3_1:+82428545 Msa0380620:intron
ATGGCTGCTTGCCTCGAACA+GGG 0.606588 3_1:+82427547 Msa0380620:five_prime_UTR
CAAATGGAAATGGAACAAAT+GGG 0.607909 3_1:+82436170 Msa0380620:exon
GAGTGTGTGTGAAAGAGGAG+GGG 0.608295 3_1:-82425406 None:intergenic
AATGGCTAGCTCCTCTGCAA+GGG 0.608630 3_1:-82436528 None:intergenic
AAGCTTCTGGCAAGTTATGG+AGG 0.609034 3_1:+82438803 Msa0380620:three_prime_UTR
GCAAGCTGGTGCAACCACAT+TGG 0.610522 3_1:+82437441 Msa0380620:CDS
CATAATGCAGTGAAGGTGAA+GGG 0.610542 3_1:+82425303 None:intergenic
ATAAAATATCACATGACGTG+TGG 0.610798 3_1:-82438955 None:intergenic
TTCTTCAAACATGTCACTCG+AGG 0.610993 3_1:-82426929 None:intergenic
ACCAACATTAGAAGAAACCA+AGG 0.612266 3_1:+82439549 Msa0380620:three_prime_UTR
AACTTCCTCAGATGAGCCAC+CGG 0.612910 3_1:-82430024 None:intergenic
GCACTTTGGAAGGAAGATAA+CGG 0.614706 3_1:+82431508 Msa0380620:five_prime_UTR
GCTGTAGCATGTTACATACC+AGG 0.615144 3_1:+82439686 Msa0380620:three_prime_UTR
AGTTGTGGAAAGAAAAGGGA+AGG 0.616133 3_1:-82425382 None:intergenic
AGAAGCTGGGGTAGCCAATG+TGG 0.617854 3_1:-82437455 None:intergenic
AGACAACTCAAATATACACC+AGG 0.617978 3_1:+82438602 Msa0380620:three_prime_UTR
AGGCACATGCATTGTGAAGA+CGG 0.618571 3_1:+82430692 Msa0380620:five_prime_UTR
GTGCCTAGGATAATTCTGGT+GGG 0.618769 3_1:-82439017 None:intergenic
ACTCTAATAATTAAGTCTTG+AGG 0.619893 3_1:-82437558 None:intergenic
TCGGCATCATTTGTAGATCA+GGG 0.622173 3_1:+82438650 Msa0380620:three_prime_UTR
TCTCGTACTACTATGGAAGG+AGG 0.622564 3_1:+82425579 Msa0380620:five_prime_UTR
CCAGAATTATCCTAGGCACA+TGG 0.624327 3_1:+82439021 Msa0380620:three_prime_UTR
CTGCGACAGAGCATCTACTA+CGG 0.626696 3_1:-82430459 None:intergenic
CATGCATTGTGAAGACGGAT+GGG 0.628345 3_1:+82430697 Msa0380620:five_prime_UTR
GCGACCTCATAATGCAGTGA+AGG 0.629872 3_1:+82425296 None:intergenic
CCTAGTCTAATTCAAGGAGA+CGG 0.631856 3_1:-82438371 None:intergenic
GTTACTGTCTCCTGAATCAG+CGG 0.633499 3_1:+82438231 Msa0380620:three_prime_UTR
TGGTGATGAAAAGAAGCGAA+AGG 0.638455 3_1:+82428601 Msa0380620:five_prime_UTR
CAGGTGCCAACTCTGGGAGA+AGG 0.638457 3_1:+82437312 Msa0380620:intron
AAAGCGATGAAGCAACGAAG+AGG 0.640073 3_1:+82431941 Msa0380620:five_prime_UTR
TGGAACAAACCATCAACAAG+TGG 0.641100 3_1:-82426961 None:intergenic
CTGAGGCTTCCCAGCAACGA+CGG 0.641916 3_1:-82425685 None:intergenic
TTCTGGGAAAACATACACCA+TGG 0.643791 3_1:+82427107 Msa0380620:five_prime_UTR
AAATTGTTGCGTGAAAGTTG+CGG 0.649510 3_1:+82425605 Msa0380620:five_prime_UTR
GACTTCTGTAGACCCTGCAA+GGG 0.652135 3_1:-82427503 None:intergenic
TCTTCAAACATGTCACTCGA+GGG 0.652246 3_1:-82426928 None:intergenic
AGGGTCTCAGTCCTCCAAGA+GGG 0.652294 3_1:+82436579 Msa0380620:CDS
CAGTATACTGAAGATATGAA+AGG 0.653970 3_1:+82438557 Msa0380620:three_prime_UTR
TCTGGGAAAACATACACCAT+GGG 0.658593 3_1:+82427108 Msa0380620:five_prime_UTR
GGAAAAGAAGTCATCATCAG+TGG 0.660783 3_1:+82438827 Msa0380620:three_prime_UTR
TCTTGCACTTGGTGACATGG+AGG 0.663202 3_1:-82436764 None:intergenic
CTCATCACTATACATCAACA+GGG 0.665415 3_1:+82438512 Msa0380620:three_prime_UTR
CAGAACGAGCTAAAAGAACA+GGG 0.669088 3_1:+82428417 Msa0380620:five_prime_UTR
GAGAGGGCATTCACTAATCG+CGG 0.669589 3_1:+82436880 Msa0380620:CDS
TCATGTACGGCCATTAATCG+CGG 0.671018 3_1:+82425629 Msa0380620:five_prime_UTR
ATGGTGTTATAACCCTTGCA+GGG 0.672246 3_1:+82427491 Msa0380620:five_prime_UTR
GATCCTCAAGTAGAGCAACT+GGG 0.673522 3_1:+82427569 Msa0380620:five_prime_UTR
GGGTTGCTAATGGCTTAACG+AGG 0.676020 3_1:+82438624 Msa0380620:three_prime_UTR
TCGTACTACTATGGAAGGAG+GGG 0.676295 3_1:+82425581 Msa0380620:five_prime_UTR
GACAACTCAAATATACACCA+GGG 0.681381 3_1:+82438603 Msa0380620:three_prime_UTR
GGAACATCTTAGGAAGTGTG+CGG 0.685609 3_1:+82439425 Msa0380620:three_prime_UTR
AAGCTGCAATGGCAACCAAG+AGG 0.693030 3_1:+82434283 Msa0380620:five_prime_UTR
AAGGGTCTCAGTCCTCCAAG+AGG 0.698635 3_1:+82436578 Msa0380620:CDS
GGTTGCTAATGGCTTAACGA+GGG 0.700399 3_1:+82438625 Msa0380620:three_prime_UTR
ACAACTCAAATATACACCAG+GGG 0.727631 3_1:+82438604 Msa0380620:three_prime_UTR
CCAACATTAGAAGAAACCAA+GGG 0.731779 3_1:+82439550 Msa0380620:three_prime_UTR
GTAGCATGTTACATACCAGG+AGG 0.751076 3_1:+82439689 Msa0380620:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTTTTAACTTATTATATA+GGG + chr3_1:82430370-82430389 Msa0380620:intron 10.0%
!! TTAAAATGAATTAAGTATAT+TGG + chr3_1:82430621-82430640 Msa0380620:intron 10.0%
!! TAAAATGAATTAAGTATATT+GGG + chr3_1:82430622-82430641 Msa0380620:intron 10.0%
!!! GATTTTTTTTTTTTTTTTGA+AGG + chr3_1:82431070-82431089 Msa0380620:intron 10.0%
!!! TATTTTATTAACATACTTAT+TGG + chr3_1:82431421-82431440 Msa0380620:intron 10.0%
!!! ATTTTATTAACATACTTATT+GGG + chr3_1:82431422-82431441 Msa0380620:intron 10.0%
!! CATACATAAATAAATAAATA+AGG - chr3_1:82431775-82431794 None:intergenic 10.0%
!! TCAAATTTAAATCTTATAAA+CGG - chr3_1:82431818-82431837 None:intergenic 10.0%
!! AAATATTTACAAAACAAATA+AGG + chr3_1:82433453-82433472 Msa0380620:intron 10.0%
!! TATAATAAAAAATTCAAATG+TGG - chr3_1:82433704-82433723 None:intergenic 10.0%
!!! AAATAATTTTGATATTTAGT+CGG + chr3_1:82434138-82434157 Msa0380620:intron 10.0%
!! TAGAAATAAAATTAAAATTG+AGG + chr3_1:82438313-82438332 Msa0380620:three_prime_UTR 10.0%
!! ATATTTACTATTAAGAAAAA+AGG - chr3_1:82439276-82439295 None:intergenic 10.0%
!!! TTTTGTTTTTTTATTATTTG+GGG - chr3_1:82439465-82439484 None:intergenic 10.0%
!!! CTTTTGTTTTTTTATTATTT+GGG - chr3_1:82439466-82439485 None:intergenic 10.0%
!!! TCTTTTGTTTTTTTATTATT+TGG - chr3_1:82439467-82439486 None:intergenic 10.0%
!! AAAAATAGATAGGTTAAAAT+CGG + chr3_1:82425875-82425894 Msa0380620:intron 15.0%
!!! CAGGTTAAAAATTAATTTTA+GGG + chr3_1:82426233-82426252 Msa0380620:intron 15.0%
!!! AGGTTAAAAATTAATTTTAG+GGG + chr3_1:82426234-82426253 Msa0380620:intron 15.0%
!! GAATTAAAATAATAAGCAAT+TGG - chr3_1:82426667-82426686 None:intergenic 15.0%
!!! TGCTTATTATTTTAATTCAT+TGG + chr3_1:82426669-82426688 Msa0380620:intron 15.0%
!!! GCTTATTATTTTAATTCATT+GGG + chr3_1:82426670-82426689 Msa0380620:intron 15.0%
!! TCTATGTTTGATATTAAAAA+TGG + chr3_1:82426698-82426717 Msa0380620:intron 15.0%
!!! GAAAATATTTTATAGATAGA+AGG + chr3_1:82428735-82428754 Msa0380620:intron 15.0%
!! TAAAATATATGAGATTCATA+TGG - chr3_1:82428811-82428830 None:intergenic 15.0%
!!! ATAAGTATTTATTTTCTTCT+AGG - chr3_1:82428922-82428941 None:intergenic 15.0%
!! TGAAATGTATATAAAAATAG+TGG - chr3_1:82430308-82430327 None:intergenic 15.0%
!! TTTATATACATTTCATACAA+AGG + chr3_1:82430313-82430332 Msa0380620:intron 15.0%
!!! CATCTTTTAACTTATTATAT+AGG + chr3_1:82430369-82430388 Msa0380620:intron 15.0%
!!! TCAATTTTTTTTTTATCAGA+TGG + chr3_1:82430542-82430561 Msa0380620:intron 15.0%
!! TTTCATTTATCAAGATAAAA+TGG - chr3_1:82431231-82431250 None:intergenic 15.0%
!! ATTAAATAACATGATAAAAG+AGG - chr3_1:82432179-82432198 None:intergenic 15.0%
!!! TTTTTAAAAAAAAAACTAGC+AGG - chr3_1:82432724-82432743 None:intergenic 15.0%
!! AAACCTTAAAATAACATAAA+AGG - chr3_1:82432991-82433010 None:intergenic 15.0%
!!! TGTTATTTTAAGGTTTTTAT+TGG + chr3_1:82432995-82433014 Msa0380620:intron 15.0%
!! TTTAGTAATAGAAAAAATTG+TGG + chr3_1:82433278-82433297 Msa0380620:intron 15.0%
!! TTTAGTAATAGAAAAAATTG+TGG + chr3_1:82433278-82433297 Msa0380620:intron 15.0%
!! ATCTAACATAAAAATAAAGA+AGG + chr3_1:82433871-82433890 Msa0380620:intron 15.0%
!! AAAATAGAATTAGGAAATAT+AGG + chr3_1:82433929-82433948 Msa0380620:intron 15.0%
!! GAAAATCAAAAATAAGTTAA+GGG - chr3_1:82435966-82435985 None:intergenic 15.0%
!! TGAAAATCAAAAATAAGTTA+AGG - chr3_1:82435965-82435984 None:intergenic 15.0%
!! AGTATTCATTAAACTTAAAA+TGG + chr3_1:82434777-82434796 Msa0380620:intron 15.0%
!! TGAAAATCAAAAATAAGTTA+AGG + chr3_1:82435965-82435984 Msa0380620:intron 15.0%
!! GAAAATCAAAAATAAGTTAA+GGG + chr3_1:82435966-82435985 Msa0380620:intron 15.0%
!!! ACTCAAAATTTTAAATTTGT+TGG - chr3_1:82436010-82436029 None:intergenic 15.0%
!! TTATTTAATATCACATGTAT+AGG - chr3_1:82436235-82436254 None:intergenic 15.0%
!!! ATTTCACTTTTCAAATAATT+AGG + chr3_1:82436657-82436676 Msa0380620:intron 15.0%
!! TTATAATTTCATGTTATATG+AGG - chr3_1:82438120-82438139 None:intergenic 15.0%
!!! TAAAATTGAGGATTTTTAAA+TGG + chr3_1:82438325-82438344 Msa0380620:three_prime_UTR 15.0%
!!! TTCCATCAATTATTATTTTA+TGG + chr3_1:82438395-82438414 Msa0380620:three_prime_UTR 15.0%
!! AACCATAAAATAATAATTGA+TGG - chr3_1:82438400-82438419 None:intergenic 15.0%
!! TATGACAATTATAATATAAG+TGG - chr3_1:82438458-82438477 None:intergenic 15.0%
!! CTTATATTATAATTGTCATA+AGG + chr3_1:82438458-82438477 Msa0380620:three_prime_UTR 15.0%
!!! TTTGTTTTTTTATTATTTGG+GGG - chr3_1:82439464-82439483 None:intergenic 15.0%
!!! TTTTAATTTATCAATCGAAG+CGG + chr3_1:82425520-82425539 Msa0380620:five_prime_UTR 20.0%
!!! ATATTAGATATTTCCTCTTT+TGG + chr3_1:82425785-82425804 Msa0380620:intron 20.0%
!! ATCTGATAGTTTACTTAATT+GGG + chr3_1:82425911-82425930 Msa0380620:intron 20.0%
!!! ACTTTCTCAACATTTATTTT+AGG + chr3_1:82425974-82425993 Msa0380620:intron 20.0%
!!! AACATGATTTTGATTGATAT+AGG + chr3_1:82426006-82426025 Msa0380620:intron 20.0%
!!! ACATGATTTTGATTGATATA+GGG + chr3_1:82426007-82426026 Msa0380620:intron 20.0%
!! TTTGTGAACATATAATCTAA+AGG - chr3_1:82426070-82426089 None:intergenic 20.0%
!! ATATGTTCACAAATTATGTT+TGG + chr3_1:82426077-82426096 Msa0380620:intron 20.0%
!!! TTCAAAATCAATTTTTGTCA+CGG - chr3_1:82426112-82426131 None:intergenic 20.0%
!! GTTTAACAAAAAAAAAATCC+AGG + chr3_1:82426214-82426233 Msa0380620:intron 20.0%
!!! CCTAAAATTAATTTTTAACC+TGG - chr3_1:82426235-82426254 None:intergenic 20.0%
!!! CCAGGTTAAAAATTAATTTT+AGG + chr3_1:82426232-82426251 Msa0380620:intron 20.0%
!!! ATGTAGAATTGAGTTTTTTT+AGG - chr3_1:82426298-82426317 None:intergenic 20.0%
!!! AACTCTTTAATTTTGGAATT+TGG + chr3_1:82426382-82426401 Msa0380620:intron 20.0%
!!! GATTTATTTTTCACAATGAT+AGG + chr3_1:82426505-82426524 Msa0380620:intron 20.0%
!! AGATTTCAATTGAAGATAAA+AGG - chr3_1:82426583-82426602 None:intergenic 20.0%
!!! ATTTTATTTTCAAAGAGAGT+TGG + chr3_1:82426613-82426632 Msa0380620:intron 20.0%
!!! TTTAGAATTTTTTGTTTTCG+TGG + chr3_1:82426638-82426657 Msa0380620:intron 20.0%
!! TTTACATTTGATCATGTTTA+TGG + chr3_1:82426892-82426911 Msa0380620:five_prime_UTR 20.0%
!! AATGAAGTAAAAATGTCAAA+TGG - chr3_1:82427078-82427097 None:intergenic 20.0%
!!! AATGTTTTGTTCAACAAAAT+TGG + chr3_1:82427180-82427199 Msa0380620:five_prime_UTR 20.0%
!!! ATGTTTTGTTCAACAAAATT+GGG + chr3_1:82427181-82427200 Msa0380620:five_prime_UTR 20.0%
!!! ATTATTATCTGAATTTTACG+TGG - chr3_1:82427755-82427774 None:intergenic 20.0%
!! TTAAAACAAAGAGATAACAA+AGG - chr3_1:82427815-82427834 None:intergenic 20.0%
!!! ATAGATGAAACTTTTCTTTT+CGG + chr3_1:82427938-82427957 Msa0380620:intron 20.0%
!!! TATTTTATAGATAGAAGGAT+TGG + chr3_1:82428740-82428759 Msa0380620:intron 20.0%
!! TTGAATAATAAGGGTAAATA+TGG + chr3_1:82429255-82429274 Msa0380620:intron 20.0%
!! TTAAGATAGGTTATTAACTT+TGG - chr3_1:82429540-82429559 None:intergenic 20.0%
!!! TTGAAATTTTTCCAACTAAA+TGG + chr3_1:82429604-82429623 Msa0380620:intron 20.0%
!!! CTTTTTTAAAATTCTTCTCT+AGG + chr3_1:82429920-82429939 Msa0380620:intron 20.0%
!!! AATTTTAATGTGATTTTCAC+TGG - chr3_1:82431129-82431148 None:intergenic 20.0%
!! ATGTTAATAAAATATGAGAC+AGG - chr3_1:82431415-82431434 None:intergenic 20.0%
!!! GAATACTAGTTTTTATGTAA+AGG - chr3_1:82431594-82431613 None:intergenic 20.0%
!! AATAAATAAATAAGGCAAGT+TGG - chr3_1:82431767-82431786 None:intergenic 20.0%
!!! ATTGTATTTTAACAAATCCA+TGG + chr3_1:82432007-82432026 Msa0380620:intron 20.0%
!! AGTATATAAAGTTATAACCA+TGG - chr3_1:82432027-82432046 None:intergenic 20.0%
!! CACATAAATTATTTCACTTT+AGG - chr3_1:82432263-82432282 None:intergenic 20.0%
!! ATAATAAACGATAATTCATG+CGG + chr3_1:82432309-82432328 Msa0380620:intron 20.0%
!! CTTGCAAATATCAAATAAAA+AGG + chr3_1:82432359-82432378 Msa0380620:intron 20.0%
!! TTGATAAAATTATCACTCTA+TGG - chr3_1:82432829-82432848 None:intergenic 20.0%
!! TTTACAAAACAAATAAGGAA+AGG + chr3_1:82433458-82433477 Msa0380620:intron 20.0%
!! TGTTTATATAGCAGAAAATA+TGG + chr3_1:82433482-82433501 Msa0380620:intron 20.0%
!!! TGTAATAAAAATTCTGAAAG+AGG - chr3_1:82433900-82433919 None:intergenic 20.0%
!! TCACAAATCAAAATAGAATT+AGG + chr3_1:82433920-82433939 Msa0380620:intron 20.0%
!! TATAGGAAAACAAGTAAATT+AGG + chr3_1:82433946-82433965 Msa0380620:intron 20.0%
!!! ACAAACATGTATTTATTTCT+CGG + chr3_1:82434010-82434029 Msa0380620:intron 20.0%
!! TATGTAGCAATAACAAATTT+AGG + chr3_1:82434368-82434387 Msa0380620:intron 20.0%
!! GTTAGACATTAAAAAACTAA+CGG - chr3_1:82434509-82434528 None:intergenic 20.0%
!! AAAAATTTATTGTATCTGGA+AGG - chr3_1:82434756-82434775 None:intergenic 20.0%
!! ACTGAAAAATTTATTGTATC+TGG - chr3_1:82434760-82434779 None:intergenic 20.0%
!! AAAACGAAATCATAATTAGA+AGG - chr3_1:82435408-82435427 None:intergenic 20.0%
!!! TTGTTATTGTTATTTTTTGC+TGG + chr3_1:82435628-82435647 Msa0380620:intron 20.0%
!!! TGTTATTGTTATTTTTTGCT+GGG + chr3_1:82435629-82435648 Msa0380620:intron 20.0%
!! TCATAACATTCATACTTTAT+TGG - chr3_1:82435671-82435690 None:intergenic 20.0%
!! AACAGATCTATATAATTCAA+CGG + chr3_1:82435758-82435777 Msa0380620:intron 20.0%
!!! TTTTTAACCTTAAATGTCTA+AGG - chr3_1:82435865-82435884 None:intergenic 20.0%
!!! CATTTAAGGTTAAAAACTAA+CGG + chr3_1:82435869-82435888 Msa0380620:intron 20.0%
!!! CTTATTTTTGATTTTCACTT+TGG - chr3_1:82434416-82434435 None:intergenic 20.0%
!! TAATATCACATGTATAGTAA+AGG - chr3_1:82436230-82436249 None:intergenic 20.0%
!! TATTTGAAAAGTGAAATTGT+AGG - chr3_1:82436654-82436673 None:intergenic 20.0%
!! ATTATTCCAAATTTGGATTT+AGG + chr3_1:82437600-82437619 Msa0380620:three_prime_UTR 20.0%
!! AAAAATCCTAAATCCAAATT+TGG - chr3_1:82437609-82437628 None:intergenic 20.0%
!!! ATGTTTTGGTTTATTTTGAT+TGG - chr3_1:82438170-82438189 None:intergenic 20.0%
!! ATAATATAAGTGGTAAAAGA+AGG - chr3_1:82438448-82438467 None:intergenic 20.0%
!! GATGTAAAAGAAAAAGTTAA+AGG - chr3_1:82439200-82439219 None:intergenic 20.0%
!! AGAAGGATATAAAAATGAAA+AGG - chr3_1:82439222-82439241 None:intergenic 20.0%
!! ATCTATCAACAAAAATCAAT+TGG - chr3_1:82439661-82439680 None:intergenic 20.0%
!!! ATCTTATTTTACAAACTGTA+CGG - chr3_1:82439856-82439875 None:intergenic 20.0%
!!! CGATTGTTCTAAAAATAGAT+AGG + chr3_1:82425865-82425884 Msa0380620:intron 25.0%
! GATCTGATAGTTTACTTAAT+TGG + chr3_1:82425910-82425929 Msa0380620:intron 25.0%
! TTCACAAATTATGTTTGGTT+TGG + chr3_1:82426082-82426101 Msa0380620:intron 25.0%
!!! AACATCAAATTTTAGCTTCA+AGG + chr3_1:82426261-82426280 Msa0380620:intron 25.0%
!!! TGACAGTAACTCTTTAATTT+TGG + chr3_1:82426375-82426394 Msa0380620:intron 25.0%
!!! TTTGCCTTTTGATGTTTTTT+CGG + chr3_1:82426433-82426452 Msa0380620:intron 25.0%
! TCAGGTATAGTTATTACTAA+CGG + chr3_1:82427014-82427033 Msa0380620:intron 25.0%
! TTTAAAGAAGGTTTCCAAAT+AGG + chr3_1:82427138-82427157 Msa0380620:five_prime_UTR 25.0%
! AACAAAACATTCATAACTTG+AGG - chr3_1:82427171-82427190 None:intergenic 25.0%
!!! TCATGATAACCGATTTTAAA+GGG - chr3_1:82427890-82427909 None:intergenic 25.0%
!!! TTCATGATAACCGATTTTAA+AGG - chr3_1:82427891-82427910 None:intergenic 25.0%
!! TCTTTTCGGAATTTAATAGA+TGG + chr3_1:82427952-82427971 Msa0380620:intron 25.0%
! ATTAAAATTGTGTCTCATCA+TGG - chr3_1:82428070-82428089 None:intergenic 25.0%
!! CAGCTATCATTAGAATTTTT+GGG - chr3_1:82428332-82428351 None:intergenic 25.0%
! AGCCATTTAATGTTTAAATC+AGG + chr3_1:82428527-82428546 Msa0380620:intron 25.0%
! CTCCTGATTTAAACATTAAA+TGG - chr3_1:82428532-82428551 None:intergenic 25.0%
! AACTTTGTGATGTAAATGAT+GGG - chr3_1:82428854-82428873 None:intergenic 25.0%
! TTAAACAAGAAACTTGTCTA+TGG + chr3_1:82428963-82428982 Msa0380620:intron 25.0%
! AAGTAAACAAAAAAGAGCAA+CGG - chr3_1:82429018-82429037 None:intergenic 25.0%
!! AAAAAGTGAAATGATTTTGC+AGG + chr3_1:82429051-82429070 Msa0380620:intron 25.0%
!!! AGCTTTTGCTTTGAATAATA+AGG + chr3_1:82429245-82429264 Msa0380620:intron 25.0%
!!! GCTTTTGCTTTGAATAATAA+GGG + chr3_1:82429246-82429265 Msa0380620:intron 25.0%
!!! AAATGTTAGGTTGAAGTTAA+AGG - chr3_1:82429499-82429518 None:intergenic 25.0%
! AGACGAAGATTAAAAATGTT+AGG - chr3_1:82429512-82429531 None:intergenic 25.0%
!! AACATTTTTAATCTTCGTCT+TGG + chr3_1:82429512-82429531 Msa0380620:intron 25.0%
!! CATTTCAGTAAGTTTAAGAT+AGG - chr3_1:82429553-82429572 None:intergenic 25.0%
!! TGTGTTCTGTATTTTTCATA+AGG + chr3_1:82429580-82429599 Msa0380620:intron 25.0%
! AAATAATAAACACAGTGATC+CGG - chr3_1:82430251-82430270 None:intergenic 25.0%
! TACATTTCATACAAAGGAAA+CGG + chr3_1:82430319-82430338 Msa0380620:intron 25.0%
! ACTTATTATATAGGGTCTTA+AGG + chr3_1:82430378-82430397 Msa0380620:intron 25.0%
! AAAATAACAGCAAAAGGTTA+GGG - chr3_1:82430514-82430533 None:intergenic 25.0%
! AAAAATAACAGCAAAAGGTT+AGG - chr3_1:82430515-82430534 None:intergenic 25.0%
! CAAAGAAAAATAACAGCAAA+AGG - chr3_1:82430520-82430539 None:intergenic 25.0%
!!! CTTAATTCATTTTAACTAGC+AGG - chr3_1:82430616-82430635 None:intergenic 25.0%
! AATGAATTAAGTATATTGGG+TGG + chr3_1:82430625-82430644 Msa0380620:intron 25.0%
! ATGAAACATATAACTTATGC+CGG - chr3_1:82431171-82431190 None:intergenic 25.0%
! CAGATAAATTTCTTCAAGTA+AGG - chr3_1:82431197-82431216 None:intergenic 25.0%
!! GAAGAAATTTATCTGAGATA+CGG + chr3_1:82431202-82431221 Msa0380620:intron 25.0%
! TTATCTTGATAAATGAAAGC+AGG + chr3_1:82431233-82431252 Msa0380620:intron 25.0%
! AGAGGAATTGAATTATTGTA+AGG + chr3_1:82431306-82431325 Msa0380620:intron 25.0%
!! TCGTGATTTTCTTTTTCTTT+TGG - chr3_1:82431334-82431353 None:intergenic 25.0%
!! TTCAAGTGCTTTCAATTTTT+GGG - chr3_1:82431729-82431748 None:intergenic 25.0%
! TATTTGATATTTGCAAGCTT+AGG - chr3_1:82432356-82432375 None:intergenic 25.0%
! GCAAATATCAAATAAAAAGG+TGG + chr3_1:82432362-82432381 Msa0380620:intron 25.0%
! AATGCAATTGAAAAATGAGA+CGG - chr3_1:82432397-82432416 None:intergenic 25.0%
! AAATAAAGACTTGAGGAAAT+TGG + chr3_1:82432855-82432874 Msa0380620:intron 25.0%
! AATAAAGACTTGAGGAAATT+GGG + chr3_1:82432856-82432875 Msa0380620:intron 25.0%
! CATGATGCATATGTTAATTA+TGG + chr3_1:82432936-82432955 Msa0380620:intron 25.0%
!!! CTGCCTTTTATGTTATTTTA+AGG + chr3_1:82432985-82433004 Msa0380620:intron 25.0%
!! AATAGCACATATTTGAAACA+TGG - chr3_1:82433621-82433640 None:intergenic 25.0%
!! AATATGTGCTATTATCATTC+AGG + chr3_1:82433628-82433647 Msa0380620:intron 25.0%
! ATAGTTGCATAAAAAAACTG+TGG + chr3_1:82433721-82433740 Msa0380620:intron 25.0%
!! TATCTTTTATACAACCTAAG+TGG - chr3_1:82433830-82433849 None:intergenic 25.0%
!!! GGATACTGTTTATACTTTTT+GGG - chr3_1:82434058-82434077 None:intergenic 25.0%
!! TGGATACTGTTTATACTTTT+TGG - chr3_1:82434059-82434078 None:intergenic 25.0%
! AAGTATAAACAGTATCCAAA+TGG + chr3_1:82434061-82434080 Msa0380620:intron 25.0%
! TTTAGGCTTAATACATCATT+TGG + chr3_1:82434385-82434404 Msa0380620:intron 25.0%
! AACTATTAAACGTCTCAATT+TGG + chr3_1:82434445-82434464 Msa0380620:intron 25.0%
! GTAAACGACAGAAAATTTAT+GGG - chr3_1:82434472-82434491 None:intergenic 25.0%
! AGTAAACGACAGAAAATTTA+TGG - chr3_1:82434473-82434492 None:intergenic 25.0%
!!! TTTTCTGTCGTTTACTATTT+TGG + chr3_1:82434477-82434496 Msa0380620:intron 25.0%
! TTTGTATTAACATGAAGAAG+TGG - chr3_1:82434604-82434623 None:intergenic 25.0%
! TCTTGTAATACTTAGATTCA+CGG - chr3_1:82434679-82434698 None:intergenic 25.0%
!!! ATTTTGTATGTGGTTTGTAT+AGG - chr3_1:82434731-82434750 None:intergenic 25.0%
! TTCTTGTGATTTCAAGAAAA+AGG - chr3_1:82434942-82434961 None:intergenic 25.0%
! TAAGAGAAATGAAAACATTG+AGG - chr3_1:82435117-82435136 None:intergenic 25.0%
!! GAATTGGGAATTAATTTTGA+AGG + chr3_1:82435202-82435221 Msa0380620:intron 25.0%
! AGGAATTAAAGAGAATTCTT+AGG + chr3_1:82435222-82435241 Msa0380620:intron 25.0%
! GGAATTAAAGAGAATTCTTA+GGG + chr3_1:82435223-82435242 Msa0380620:intron 25.0%
! ATCAAATCAAAACAAAACCA+GGG - chr3_1:82435300-82435319 None:intergenic 25.0%
! AATCAAATCAAAACAAAACC+AGG - chr3_1:82435301-82435320 None:intergenic 25.0%
! CACATTAAAACTGTCAAATT+CGG - chr3_1:82435489-82435508 None:intergenic 25.0%
! AAGTATGAATGTTATGATGA+AGG + chr3_1:82435674-82435693 Msa0380620:intron 25.0%
! GTAGAAATAAGGAAAAAATG+AGG + chr3_1:82435711-82435730 Msa0380620:intron 25.0%
! AAATGAATTTATAAGGTCCA+TGG + chr3_1:82435816-82435835 Msa0380620:intron 25.0%
! AACTATTAAACGTCTCAATT+TGG - chr3_1:82434445-82434464 None:intergenic 25.0%
! AATTGAGACGTTTAATAGTT+AGG + chr3_1:82435933-82435952 Msa0380620:intron 25.0%
! ATTGAGACGTTTAATAGTTA+GGG + chr3_1:82435934-82435953 Msa0380620:intron 25.0%
!!! TGTTGGCTTAATATATCATT+TGG - chr3_1:82435993-82436012 None:intergenic 25.0%
!! AGTTATATTTTCACTTGTAG+AGG + chr3_1:82436060-82436079 Msa0380620:intron 25.0%
! TTTCAAATAATTAGGATCCT+TGG + chr3_1:82436665-82436684 Msa0380620:intron 25.0%
! ACATATATAAGATTACCACT+GGG + chr3_1:82437079-82437098 Msa0380620:intron 25.0%
!!! ATATCTGTGCTTCTTTTTTA+CGG - chr3_1:82437169-82437188 None:intergenic 25.0%
! AAGATAAAGATTGCAATATG+TGG + chr3_1:82437189-82437208 Msa0380620:intron 25.0%
!! TTTTATTGAGTAGCTTATAC+TGG + chr3_1:82437246-82437265 Msa0380620:intron 25.0%
!!! AAGATTATTGTTACTTTGTG+AGG + chr3_1:82437480-82437499 Msa0380620:CDS 25.0%
!! AAGTAAGAATGCTTTGAATA+GGG + chr3_1:82437513-82437532 Msa0380620:CDS 25.0%
! ACTCTAATAATTAAGTCTTG+AGG - chr3_1:82437561-82437580 None:intergenic 25.0%
! TGTGAACATTATTCCAAATT+TGG + chr3_1:82437593-82437612 Msa0380620:three_prime_UTR 25.0%
!!! TTTGGATTTAGGATTTTTCA+TGG + chr3_1:82437611-82437630 Msa0380620:three_prime_UTR 25.0%
!!! TTGGATTTAGGATTTTTCAT+GGG + chr3_1:82437612-82437631 Msa0380620:three_prime_UTR 25.0%
! CTTCAAGCAAAAATCAATTA+TGG + chr3_1:82437646-82437665 Msa0380620:three_prime_UTR 25.0%
!! TATTTAGGGTATAATTGGTT+GGG - chr3_1:82437852-82437871 None:intergenic 25.0%
!! TCAAGTATTTAGGGTATAAT+TGG - chr3_1:82437857-82437876 None:intergenic 25.0%
! GATATTGACAAGTTTATTGA+GGG - chr3_1:82437888-82437907 None:intergenic 25.0%
! TGATATTGACAAGTTTATTG+AGG - chr3_1:82437889-82437908 None:intergenic 25.0%
!! TTCTGTCAATATTTTGTCTA+TGG - chr3_1:82437919-82437938 None:intergenic 25.0%
!! TATTTAGGGTATAATTGGTT+GGG - chr3_1:82437852-82437871 None:intergenic 25.0%
!! TCAAGTATTTAGGGTATAAT+TGG - chr3_1:82437857-82437876 None:intergenic 25.0%
! GATATTGACAAGTTTATTGA+GGG - chr3_1:82437888-82437907 None:intergenic 25.0%
! TGATATTGACAAGTTTATTG+AGG - chr3_1:82437889-82437908 None:intergenic 25.0%
!! TTCTGTCAATATTTTGTCTA+TGG - chr3_1:82437919-82437938 None:intergenic 25.0%
! AATCGTCGTTTATATGAAAT+TGG + chr3_1:82438687-82438706 Msa0380620:intron 25.0%
! ATGAAAAAACTAGCAATTGT+AGG + chr3_1:82438778-82438797 Msa0380620:three_prime_UTR 25.0%
! TTGATATACATTCCTTCAAA+AGG - chr3_1:82439171-82439190 None:intergenic 25.0%
! TTATTATGTCAAGTCAAAGA+AGG - chr3_1:82439239-82439258 None:intergenic 25.0%
!!! TAAGAAAAAAGGAAGTGTTT+TGG - chr3_1:82439265-82439284 None:intergenic 25.0%
! TTTGTCATAACTACTGTATA+TGG + chr3_1:82439404-82439423 Msa0380620:three_prime_UTR 25.0%
AAACACTGAAATTCCAAAAG+AGG - chr3_1:82425801-82425820 None:intergenic 30.0%
! ATTTGACTTCATTCCATTTC+TGG + chr3_1:82425938-82425957 Msa0380620:intron 30.0%
!!! TGATTTTGATTGATATAGGG+AGG + chr3_1:82426010-82426029 Msa0380620:intron 30.0%
AAAGGAGAAATTGCAAAACT+GGG - chr3_1:82426052-82426071 None:intergenic 30.0%
TAAAGGAGAAATTGCAAAAC+TGG - chr3_1:82426053-82426072 None:intergenic 30.0%
ATGTTTGATTACACTCTTTG+AGG - chr3_1:82426336-82426355 None:intergenic 30.0%
! TCAAAGAGTGTAATCAAACA+TGG + chr3_1:82426335-82426354 Msa0380620:intron 30.0%
GAAACCGAAAAAACATCAAA+AGG - chr3_1:82426440-82426459 None:intergenic 30.0%
! TTGAAGATAAAAGGCATACA+AGG - chr3_1:82426574-82426593 None:intergenic 30.0%
CTTCAATTGAAATCTGTCTA+TGG + chr3_1:82426588-82426607 Msa0380620:intron 30.0%
!! TTGACTTGTTGCTATAATTC+AGG + chr3_1:82426849-82426868 Msa0380620:intron 30.0%
! ATTTTTACTTCATTGCAGAC+AGG + chr3_1:82427084-82427103 Msa0380620:intron 30.0%
! CTTGAGGTATTATTCCTATT+TGG - chr3_1:82427155-82427174 None:intergenic 30.0%
AAATCAACATACCTCGATAA+AGG - chr3_1:82427244-82427263 None:intergenic 30.0%
TTCATATGTGCAAAGTTATC+TGG + chr3_1:82427305-82427324 Msa0380620:intron 30.0%
AGAAGAAGTAAGAGATTTAC+TGG + chr3_1:82427372-82427391 Msa0380620:five_prime_UTR 30.0%
TGTCACAACACTAAAAGAAA+TGG + chr3_1:82427528-82427547 Msa0380620:five_prime_UTR 30.0%
AGAAAAATGCATTATCAACC+TGG - chr3_1:82427617-82427636 None:intergenic 30.0%
! AAATCTGATTTTCAGACTCT+TGG + chr3_1:82427679-82427698 Msa0380620:intron 30.0%
AAACAAAGAGATAACAAAGG+TGG - chr3_1:82427812-82427831 None:intergenic 30.0%
!!! TCTTTGTTTTAAAAGTCTGC+TGG + chr3_1:82427823-82427842 Msa0380620:intron 30.0%
!!! GGGTTTTATCCCTTTAAAAT+CGG + chr3_1:82427878-82427897 Msa0380620:intron 30.0%
ATCGGTTATCATGAAATGTT+TGG + chr3_1:82427896-82427915 Msa0380620:intron 30.0%
TCGGTTATCATGAAATGTTT+GGG + chr3_1:82427897-82427916 Msa0380620:intron 30.0%
TAAAAAGCAACAACAGTTTG+AGG - chr3_1:82428211-82428230 None:intergenic 30.0%
!!! GTTGTTGCTTTTTATTCTAC+TGG + chr3_1:82428217-82428236 Msa0380620:intron 30.0%
! GCAGCTATCATTAGAATTTT+TGG - chr3_1:82428333-82428352 None:intergenic 30.0%
TCAGGAGTTCATATTAACAA+AGG + chr3_1:82428545-82428564 Msa0380620:intron 30.0%
! GACTAATTTGTAGATGGATT+CGG - chr3_1:82428789-82428808 None:intergenic 30.0%
! CATATGGACTAATTTGTAGA+TGG - chr3_1:82428795-82428814 None:intergenic 30.0%
GAACTTTGTGATGTAAATGA+TGG - chr3_1:82428855-82428874 None:intergenic 30.0%
! AAATAGTCTGGCTTCAAAAT+AGG - chr3_1:82428879-82428898 None:intergenic 30.0%
! GTTTCTCTTTTTGTACCTTA+AGG + chr3_1:82429117-82429136 Msa0380620:intron 30.0%
TGACAAAAAAAAGCTCTGTT+TGG - chr3_1:82429405-82429424 None:intergenic 30.0%
!!! AGAGCTAAAAGCTCTTTTTT+TGG + chr3_1:82429449-82429468 Msa0380620:intron 30.0%
GCTAAAATAGAGATGTTGTT+TGG - chr3_1:82429726-82429745 None:intergenic 30.0%
! TGCATACTTCAAAGTGTTTA+GGG - chr3_1:82429784-82429803 None:intergenic 30.0%
! TTGCATACTTCAAAGTGTTT+AGG - chr3_1:82429785-82429804 None:intergenic 30.0%
AATAATGCAATACTCACAAC+AGG - chr3_1:82429834-82429853 None:intergenic 30.0%
!!! TCTCATTTTTAGCATTTCAC+TGG - chr3_1:82429964-82429983 None:intergenic 30.0%
TATTTCCTATAATAGCCTAC+TGG + chr3_1:82430103-82430122 Msa0380620:intron 30.0%
AAATCATAAACACAGTGATG+AGG - chr3_1:82430178-82430197 None:intergenic 30.0%
ATCACTGTGTTTATGATTTG+AGG + chr3_1:82430179-82430198 Msa0380620:intron 30.0%
! TTATGATTTGAGGCATTCAA+TGG + chr3_1:82430189-82430208 Msa0380620:intron 30.0%
TTATATAGGGTCTTAAGGAA+AGG + chr3_1:82430383-82430402 Msa0380620:intron 30.0%
AAATAACAGCAAAAGGTTAG+GGG - chr3_1:82430513-82430532 None:intergenic 30.0%
AACATGAAAGGACAAACTTA+GGG - chr3_1:82430577-82430596 None:intergenic 30.0%
TAACATGAAAGGACAAACTT+AGG - chr3_1:82430578-82430597 None:intergenic 30.0%
AACTACAGTGATAACATGAA+AGG - chr3_1:82430589-82430608 None:intergenic 30.0%
TTGAAGAAGTAGCAAAAGAA+TGG + chr3_1:82430949-82430968 Msa0380620:five_prime_UTR 30.0%
TGAAGAAGTAGCAAAAGAAT+GGG + chr3_1:82430950-82430969 Msa0380620:five_prime_UTR 30.0%
CAAACTTCTGCAAAATAGTA+TGG + chr3_1:82430977-82430996 Msa0380620:five_prime_UTR 30.0%
AAAATCAATACAACCATGAC+CGG + chr3_1:82431149-82431168 Msa0380620:intron 30.0%
!! TGCTTTCAATTTTTGGGAAT+GGG - chr3_1:82431723-82431742 None:intergenic 30.0%
! CTTCAAGTGCTTTCAATTTT+TGG - chr3_1:82431730-82431749 None:intergenic 30.0%
GGATGAAATACAGTCTATAA+AGG + chr3_1:82431969-82431988 Msa0380620:five_prime_UTR 30.0%
! AATACAATCGTCAACCTTTT+GGG - chr3_1:82431995-82432014 None:intergenic 30.0%
! AAATACAATCGTCAACCTTT+TGG - chr3_1:82431996-82432015 None:intergenic 30.0%
TATGACCTTAATAATGTTGC+AGG + chr3_1:82432060-82432079 Msa0380620:intron 30.0%
TTGAACCTGCAACATTATTA+AGG - chr3_1:82432068-82432087 None:intergenic 30.0%
AAATAAAAAGGTGGAACTAG+AGG + chr3_1:82432371-82432390 Msa0380620:intron 30.0%
GAGTGGAAATCTTTGAATTA+AGG - chr3_1:82432691-82432710 None:intergenic 30.0%
ACAGTAGAAATAAAGACTTG+AGG + chr3_1:82432848-82432867 Msa0380620:intron 30.0%
ATAAAGACTTGAGGAAATTG+GGG + chr3_1:82432857-82432876 Msa0380620:intron 30.0%
TAATTATGGAAAGACAGACA+TGG + chr3_1:82432950-82432969 Msa0380620:intron 30.0%
AAAGACAGACATGGAAATAT+GGG + chr3_1:82432959-82432978 Msa0380620:intron 30.0%
TGATAAGAACAAATGTTCAC+TGG - chr3_1:82433028-82433047 None:intergenic 30.0%
TATGATATGGTTCAATTGAG+AGG + chr3_1:82433079-82433098 Msa0380620:intron 30.0%
GTAACTAAAATGTCGTTGTA+TGG + chr3_1:82433101-82433120 Msa0380620:intron 30.0%
! CTCGTCAATATTTTCTACTT+AGG - chr3_1:82433158-82433177 None:intergenic 30.0%
CTAAGTAGAAAATATTGACG+AGG + chr3_1:82433156-82433175 Msa0380620:intron 30.0%
AAAAAATTGGATGCTCCATT+TGG - chr3_1:82434079-82434098 None:intergenic 30.0%
TTGAGACGTTTAATAGTTAG+AGG - chr3_1:82435935-82435954 None:intergenic 30.0%
ACATTAAAAAACTAACGGAG+AGG - chr3_1:82434504-82434523 None:intergenic 30.0%
AAGAGAGGGAAAAAATTATG+TGG - chr3_1:82434565-82434584 None:intergenic 30.0%
TAGGATTCAAAAAACTGCAA+TGG - chr3_1:82434712-82434731 None:intergenic 30.0%
CAAGAAAGTCATAACTATCT+TGG - chr3_1:82434822-82434841 None:intergenic 30.0%
! TAGCTTGCAATTAGTTATCT+TGG - chr3_1:82434899-82434918 None:intergenic 30.0%
! ACTGGTGTATACTATTTTGT+TGG - chr3_1:82434982-82435001 None:intergenic 30.0%
TGTGTATTGAGATTTCACAA+AGG + chr3_1:82435259-82435278 Msa0380620:intron 30.0%
!!! GTGATTTTAGTTCTGCATAT+GGG - chr3_1:82435344-82435363 None:intergenic 30.0%
!!! TGTGATTTTAGTTCTGCATA+TGG - chr3_1:82435345-82435364 None:intergenic 30.0%
ATCATAATTAGAAGGAGAGA+AGG - chr3_1:82435400-82435419 None:intergenic 30.0%
TGATGTGAATGAATTGAATC+CGG + chr3_1:82435427-82435446 Msa0380620:intron 30.0%
!!! TTCGTTTTGTTTCTCTAAGA+AGG + chr3_1:82435515-82435534 Msa0380620:intron 30.0%
!!! CTTGTTGTTGTTTGTTTTCT+GGG + chr3_1:82435538-82435557 Msa0380620:intron 30.0%
AAACAACAACCCAACAAATT+CGG - chr3_1:82435571-82435590 None:intergenic 30.0%
TGAAGGAAGAAGTAGAAATA+AGG + chr3_1:82435700-82435719 Msa0380620:intron 30.0%
TATAGATCTGTTGTACCTTA+CGG - chr3_1:82435750-82435769 None:intergenic 30.0%
TTGAGACGTTTAATAGTTAG+GGG + chr3_1:82435935-82435954 Msa0380620:intron 30.0%
!! TTTTGAGTCTTGCGATTTAA+AGG + chr3_1:82436022-82436041 Msa0380620:intron 30.0%
ACAAATGGAAATGGAACAAA+TGG + chr3_1:82436169-82436188 Msa0380620:exon 30.0%
CAAATGGAAATGGAACAAAT+GGG + chr3_1:82436170-82436189 Msa0380620:exon 30.0%
AAAGTTATGATGCAATCTTC+AGG + chr3_1:82436498-82436517 Msa0380620:intron 30.0%
! AGATTTTGTAAGAACAAACC+TGG - chr3_1:82436618-82436637 None:intergenic 30.0%
! TTTTCAACACTTTTCTTCTC+AGG + chr3_1:82436737-82436756 Msa0380620:intron 30.0%
! TTTCAACACTTTTCTTCTCA+GGG + chr3_1:82436738-82436757 Msa0380620:intron 30.0%
CATAGATTGAAGCAAATTCT+TGG - chr3_1:82436938-82436957 None:intergenic 30.0%
CAATCTATGTTTAACTCTGT+TGG + chr3_1:82436949-82436968 Msa0380620:intron 30.0%
CACATATATAAGATTACCAC+TGG + chr3_1:82437078-82437097 Msa0380620:intron 30.0%
CATATATAAGATTACCACTG+GGG + chr3_1:82437080-82437099 Msa0380620:intron 30.0%
GATCAAATCAAAGAACTTGT+CGG + chr3_1:82437358-82437377 Msa0380620:CDS 30.0%
ACAATAATCTTACAGAAGCT+GGG - chr3_1:82437471-82437490 None:intergenic 30.0%
AACAATAATCTTACAGAAGC+TGG - chr3_1:82437472-82437491 None:intergenic 30.0%
! CAAGTAAGAATGCTTTGAAT+AGG + chr3_1:82437512-82437531 Msa0380620:CDS 30.0%
!! AATTATTAGAGTGCTGTTTC+AGG + chr3_1:82437569-82437588 Msa0380620:exon 30.0%
AACTAATATGAGCTTAGATC+TGG - chr3_1:82437713-82437732 None:intergenic 30.0%
GCATAAAACAAGTGTAATGT+TGG + chr3_1:82437779-82437798 Msa0380620:three_prime_UTR 30.0%
TAATTGGTTGGGTAGAAAAA+GGG - chr3_1:82437841-82437860 None:intergenic 30.0%
ATAATTGGTTGGGTAGAAAA+AGG - chr3_1:82437842-82437861 None:intergenic 30.0%
! GTATTTAGGGTATAATTGGT+TGG - chr3_1:82437853-82437872 None:intergenic 30.0%
GTGACATATTAGTGTAATGT+TGG + chr3_1:82437939-82437958 Msa0380620:intron 30.0%
TAATTGGTTGGGTAGAAAAA+GGG - chr3_1:82437841-82437860 None:intergenic 30.0%
ATAATTGGTTGGGTAGAAAA+AGG - chr3_1:82437842-82437861 None:intergenic 30.0%
! GTATTTAGGGTATAATTGGT+TGG - chr3_1:82437853-82437872 None:intergenic 30.0%
! GATCAAAGAGTCTAATGTTT+TGG - chr3_1:82438184-82438203 None:intergenic 30.0%
!! TTGCTGTTGTAGCAAATTTT+TGG + chr3_1:82438418-82438437 Msa0380620:three_prime_UTR 30.0%
GTATACTGTCTCAATGAATT+TGG - chr3_1:82438545-82438564 None:intergenic 30.0%
CAGTATACTGAAGATATGAA+AGG + chr3_1:82438557-82438576 Msa0380620:three_prime_UTR 30.0%
TTATTTCAGATGAAACCCAT+TGG + chr3_1:82438745-82438764 Msa0380620:intron 30.0%
TATTTCAGATGAAACCCATT+GGG + chr3_1:82438746-82438765 Msa0380620:intron 30.0%
TATTGCAATTCAAATGGAAG+TGG + chr3_1:82438851-82438870 Msa0380620:three_prime_UTR 30.0%
! ATCAATTCTGAAAGTTTCCA+TGG - chr3_1:82438883-82438902 None:intergenic 30.0%
ATAAAATATCACATGACGTG+TGG - chr3_1:82438958-82438977 None:intergenic 30.0%
! GCAAAATCATATCCTTTTGA+AGG + chr3_1:82439156-82439175 Msa0380620:intron 30.0%
TTACACTGTTGCAAGAAATA+AGG - chr3_1:82439319-82439338 None:intergenic 30.0%
AAAAATTTCCAAGATCTGGA+CGG - chr3_1:82439387-82439406 None:intergenic 30.0%
TGACAAAAATTTCCAAGATC+TGG - chr3_1:82439391-82439410 None:intergenic 30.0%
TACTGTATATGGAACATCTT+AGG + chr3_1:82439415-82439434 Msa0380620:three_prime_UTR 30.0%
AACAAAAGATATTGCTTGCT+TGG + chr3_1:82439478-82439497 Msa0380620:three_prime_UTR 30.0%
! ATACTATTTTCCAAGAACTG+TGG - chr3_1:82439523-82439542 None:intergenic 30.0%
AAGATTCTTGTATCAAATCC+TGG + chr3_1:82439573-82439592 Msa0380620:three_prime_UTR 30.0%
GATGTTAAATACACATTTCC+AGG - chr3_1:82439594-82439613 None:intergenic 30.0%
! ATGTTACAGCTTTTTACAAC+AGG - chr3_1:82439748-82439767 None:intergenic 30.0%
! AAGCTGTAACATTAGTGTTT+TGG + chr3_1:82439756-82439775 Msa0380620:three_prime_UTR 30.0%
!! TGCAATTAGCTTTAGGTAAA+TGG - chr3_1:82439883-82439902 None:intergenic 30.0%
!! TAACAACTGCAATTAGCTTT+AGG - chr3_1:82439890-82439909 None:intergenic 30.0%
GAAAGTAATGTGGTTGAAGA+GGG - chr3_1:82425437-82425456 None:intergenic 35.0%
AGAAAGTAATGTGGTTGAAG+AGG - chr3_1:82425438-82425457 None:intergenic 35.0%
ACTAGAGAGAGAAAGTAATG+TGG - chr3_1:82425447-82425466 None:intergenic 35.0%
AACTAACTCTCGTACTACTA+TGG + chr3_1:82425572-82425591 Msa0380620:five_prime_UTR 35.0%
AAATTGTTGCGTGAAAGTTG+CGG + chr3_1:82425605-82425624 Msa0380620:five_prime_UTR 35.0%
TTGGAATTTCAGTGTTTACG+TGG + chr3_1:82425804-82425823 Msa0380620:intron 35.0%
! CTTCATTCCATTTCTGGATT+TGG + chr3_1:82425944-82425963 Msa0380620:intron 35.0%
! TTTGATTACACTCTTTGAGG+AGG - chr3_1:82426333-82426352 None:intergenic 35.0%
GCTATAATTCAGGTGCAAAT+TGG + chr3_1:82426859-82426878 Msa0380620:intron 35.0%
GAACAGTAGCATTATATCCT+TGG - chr3_1:82426984-82427003 None:intergenic 35.0%
! GAAAAGAGTTACAAGTGTTG+TGG - chr3_1:82427056-82427075 None:intergenic 35.0%
CAACAAAATTGGGAGCTTAA+AGG + chr3_1:82427191-82427210 Msa0380620:five_prime_UTR 35.0%
! AGTTTCTGTTTTGCTCATTG+AGG - chr3_1:82427404-82427423 None:intergenic 35.0%
AGCAAAACAGAAACTGCAAA+TGG + chr3_1:82427409-82427428 Msa0380620:five_prime_UTR 35.0%
GATGTCTCACGAATTTGTAT+TGG - chr3_1:82427469-82427488 None:intergenic 35.0%
CAAATTCGTGAGACATCAAA+TGG + chr3_1:82427472-82427491 Msa0380620:five_prime_UTR 35.0%
CAAATATGAACAACCAATCC+AGG + chr3_1:82427596-82427615 Msa0380620:five_prime_UTR 35.0%
AATGCATTATCAACCTGGAT+TGG - chr3_1:82427612-82427631 None:intergenic 35.0%
! CTTTCTCCAATCATGTTTTG+TGG - chr3_1:82427725-82427744 None:intergenic 35.0%
!! TCTAACAATGGATTGAGCTT+TGG + chr3_1:82427857-82427876 Msa0380620:intron 35.0%
!! CTAACAATGGATTGAGCTTT+GGG + chr3_1:82427858-82427877 Msa0380620:intron 35.0%
! AAATACTTTTCCCACTACGT+GGG - chr3_1:82428151-82428170 None:intergenic 35.0%
! AAAATACTTTTCCCACTACG+TGG - chr3_1:82428152-82428171 None:intergenic 35.0%
CTCTAATGTTATGGTGAAGA+TGG - chr3_1:82428297-82428316 None:intergenic 35.0%
TAACATTACCAAGTGCTAGA+AGG - chr3_1:82428571-82428590 None:intergenic 35.0%
GGTAATGTTATTAGTGCACT+TGG + chr3_1:82428581-82428600 Msa0380620:five_prime_UTR 35.0%
! AAGGTGTTCATGTTCCATAT+AGG + chr3_1:82428624-82428643 Msa0380620:five_prime_UTR 35.0%
AGGTGTTCATGTTCCATATA+GGG + chr3_1:82428625-82428644 Msa0380620:five_prime_UTR 35.0%
GTAAGTTTACTGTCCCTATA+TGG - chr3_1:82428641-82428660 None:intergenic 35.0%
! TAAACTTACCAGGCTTTTAC+AGG + chr3_1:82428652-82428671 Msa0380620:five_prime_UTR 35.0%
ATATCAAACCTGTAAAAGCC+TGG - chr3_1:82428663-82428682 None:intergenic 35.0%
! ATGATTTTGCAGGATTCACT+TGG + chr3_1:82429061-82429080 Msa0380620:intron 35.0%
! TGATTTTGCAGGATTCACTT+GGG + chr3_1:82429062-82429081 Msa0380620:intron 35.0%
! TTTTACCAAACAGAGCCTTA+AGG - chr3_1:82429135-82429154 None:intergenic 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr3_1:82429208-82429227 Msa0380620:intron 35.0%
ACGAGCTTATAGCTTATTTC+AGG - chr3_1:82429356-82429375 None:intergenic 35.0%
TTTACCAAACAGAGCCTAAA+TGG + chr3_1:82429473-82429492 Msa0380620:intron 35.0%
GTTGAAGTTAAAGGCCATTT+AGG - chr3_1:82429490-82429509 None:intergenic 35.0%
CTTTGCATCAACCATTTAGT+TGG - chr3_1:82429618-82429637 None:intergenic 35.0%
! CAACTAAATGGTTGATGCAA+AGG + chr3_1:82429616-82429635 Msa0380620:intron 35.0%
AAGAAGCAACATGAAAAGCT+TGG - chr3_1:82429677-82429696 None:intergenic 35.0%
! TACTCACAACAGGCTTATTT+TGG - chr3_1:82429824-82429843 None:intergenic 35.0%
TTTAGCATTTCACTGGACAT+GGG - chr3_1:82429957-82429976 None:intergenic 35.0%
! TTTTAGCATTTCACTGGACA+TGG - chr3_1:82429958-82429977 None:intergenic 35.0%
GCTAAAAATGAGACAACAAC+TGG + chr3_1:82429971-82429990 Msa0380620:five_prime_UTR 35.0%
TGATGAGATACCAATCAATC+CGG + chr3_1:82430156-82430175 Msa0380620:intron 35.0%
! GCAAAAGCACAATTAATGCT+AGG - chr3_1:82430286-82430305 None:intergenic 35.0%
TGTCGCAGAACAAAATGAAA+AGG + chr3_1:82430474-82430493 Msa0380620:five_prime_UTR 35.0%
ATAATTTATGCACGCAAGCT+TGG + chr3_1:82430648-82430667 Msa0380620:intron 35.0%
!! GCTTGGAAACTTTGATTTTC+AGG + chr3_1:82430665-82430684 Msa0380620:intron 35.0%
!! GGAAACTTTGATTTTCAGGA+TGG + chr3_1:82430669-82430688 Msa0380620:intron 35.0%
!! AACTTTGATTTTCAGGATGG+AGG + chr3_1:82430672-82430691 Msa0380620:intron 35.0%
!! TACAAGTTGCTCATTTTAGC+AGG + chr3_1:82430912-82430931 Msa0380620:intron 35.0%
GCATGAATTGAATAAACGCT+TGG + chr3_1:82431010-82431029 Msa0380620:five_prime_UTR 35.0%
ATAATTCAATTCCTCTGCGA+CGG - chr3_1:82431302-82431321 None:intergenic 35.0%
! TTGTTTTCTCCGAGCATTAT+TGG + chr3_1:82431365-82431384 Msa0380620:intron 35.0%
! CTCTTTTCTCCAATAATGCT+CGG - chr3_1:82431377-82431396 None:intergenic 35.0%
TGGACAAACACAGAAATTAG+AGG + chr3_1:82431694-82431713 Msa0380620:five_prime_UTR 35.0%
!! GTGCTTTCAATTTTTGGGAA+TGG - chr3_1:82431724-82431743 None:intergenic 35.0%
! AAACTCCGCATGTTAGATTT+TGG + chr3_1:82431867-82431886 Msa0380620:intron 35.0%
CAGATCCAAAATCTAACATG+CGG - chr3_1:82431875-82431894 None:intergenic 35.0%
!! TTTGCTTTTGCTTCATAAGC+TGG - chr3_1:82431921-82431940 None:intergenic 35.0%
GCAGCAAAAGATAAAACAAG+AGG + chr3_1:82432090-82432109 Msa0380620:five_prime_UTR 35.0%
CTGTCTTTGCAAAACAGTTA+AGG + chr3_1:82432459-82432478 Msa0380620:intron 35.0%
CTTTGCAAAACAGTTAAGGA+AGG + chr3_1:82432463-82432482 Msa0380620:intron 35.0%
TGGAAATACATACCATTCTC+TGG - chr3_1:82432541-82432560 None:intergenic 35.0%
! CATAACAGCATTGAACAACT+TGG - chr3_1:82432561-82432580 None:intergenic 35.0%
CAGCAAAGCTAAAATGCATA+TGG - chr3_1:82432638-82432657 None:intergenic 35.0%
TATGTTGGAAAGACGAAAGA+AGG - chr3_1:82432910-82432929 None:intergenic 35.0%
! TGCATCATGAAAGAGTATGT+TGG - chr3_1:82432925-82432944 None:intergenic 35.0%
GAAAGACAGACATGGAAATA+TGG + chr3_1:82432958-82432977 Msa0380620:intron 35.0%
GAAGCATGTACTCTATGATA+TGG + chr3_1:82433066-82433085 Msa0380620:intron 35.0%
TAGGAACAATTCATCGTAGA+GGG - chr3_1:82433139-82433158 None:intergenic 35.0%
TTAGGAACAATTCATCGTAG+AGG - chr3_1:82433140-82433159 None:intergenic 35.0%
ATAGAAAAAATTGTGGCTGC+TGG + chr3_1:82433285-82433304 Msa0380620:intron 35.0%
TAGAAAAAATTGTGGCTGCT+GGG + chr3_1:82433286-82433305 Msa0380620:intron 35.0%
ATAAAAAAACTGTGGCTGCT+GGG + chr3_1:82433729-82433748 Msa0380620:intron 35.0%
! TTAGTCGGTAAGTATTGTAC+TGG + chr3_1:82434153-82434172 Msa0380620:intron 35.0%
ACACTGCAAAATTGAATTCG+CGG - chr3_1:82434188-82434207 None:intergenic 35.0%
AACACGTACTTGCTTAACAT+AGG - chr3_1:82434233-82434252 None:intergenic 35.0%
AGCAAGTACGTGTTATATTC+AGG + chr3_1:82434239-82434258 Msa0380620:intron 35.0%
GTTATATTCAGGTCCTTCAA+AGG + chr3_1:82434250-82434269 Msa0380620:intron 35.0%
! CTTCTTCAGTTTTCCTTTGA+AGG - chr3_1:82434266-82434285 None:intergenic 35.0%
! AAATCATACCTGAAGTGTCT+CGG - chr3_1:82434344-82434363 None:intergenic 35.0%
GGGAAAAAATTATGTGGTGA+TGG - chr3_1:82434559-82434578 None:intergenic 35.0%
GTATTAACATGAAGAAGTGG+TGG - chr3_1:82434601-82434620 None:intergenic 35.0%
! CTGGAAGGTAATTTTGTATG+TGG - chr3_1:82434741-82434760 None:intergenic 35.0%
! ACTATCTTGGTGGTTTATCT+TGG - chr3_1:82434809-82434828 None:intergenic 35.0%
GAAAGTCATAACTATCTTGG+TGG - chr3_1:82434819-82434838 None:intergenic 35.0%
! AGTTATCTTGGTGGTTTACA+TGG - chr3_1:82434887-82434906 None:intergenic 35.0%
CTTGCAATTAGTTATCTTGG+TGG - chr3_1:82434896-82434915 None:intergenic 35.0%
GAGATTAAATTGTGAGGAAC+TGG - chr3_1:82435000-82435019 None:intergenic 35.0%
GTTGTTGAGTTAGACAATGA+TGG - chr3_1:82435086-82435105 None:intergenic 35.0%
GTCTAACTCAACAACAACAT+TGG + chr3_1:82435091-82435110 Msa0380620:intron 35.0%
! AGTGTTGTTGTGTTGCATAT+GGG - chr3_1:82435371-82435390 None:intergenic 35.0%
! AAGTGTTGTTGTGTTGCATA+TGG - chr3_1:82435372-82435391 None:intergenic 35.0%
!!! GCTTGTTGTTGTTTGTTTTC+TGG + chr3_1:82435537-82435556 Msa0380620:intron 35.0%
! GGTTTGATTCCGAATTTGTT+GGG + chr3_1:82435559-82435578 Msa0380620:intron 35.0%
TGTTATGATGAAGGAGATGA+AGG + chr3_1:82435683-82435702 Msa0380620:intron 35.0%
!! AGGAAAAAATGAGGTGTTGA+AGG + chr3_1:82435720-82435739 Msa0380620:intron 35.0%
TGAATTTATAAGGTCCATGG+TGG + chr3_1:82435819-82435838 Msa0380620:intron 35.0%
! TCTAAGGTGAACCACATTAA+AGG - chr3_1:82435849-82435868 None:intergenic 35.0%
TGGTTCACCTTAGACATTTA+AGG + chr3_1:82435855-82435874 Msa0380620:intron 35.0%
AAGGTTAAAAACTAACGGAG+AGG + chr3_1:82435874-82435893 Msa0380620:intron 35.0%
GAGAGGACCAAAATAGTAAA+CGG + chr3_1:82435891-82435910 Msa0380620:intron 35.0%
!! TCTTCTGCCGTTTACTATTT+TGG - chr3_1:82435901-82435920 None:intergenic 35.0%
AGTAAACGGCAGAAGATTTA+TGG + chr3_1:82435905-82435924 Msa0380620:intron 35.0%
GTAAACGGCAGAAGATTTAT+GGG + chr3_1:82435906-82435925 Msa0380620:intron 35.0%
! GAATTTTCCATTCCCTTCTT+AGG + chr3_1:82436201-82436220 Msa0380620:intron 35.0%
TAGTAAAGGCAACCTAAGAA+GGG - chr3_1:82436216-82436235 None:intergenic 35.0%
ATAGTAAAGGCAACCTAAGA+AGG - chr3_1:82436217-82436236 None:intergenic 35.0%
CTCATTTACATGCTTCAGAA+TGG - chr3_1:82436549-82436568 None:intergenic 35.0%
!! TGTAAATGAGTTTGCTGCTA+AGG + chr3_1:82436559-82436578 Msa0380620:CDS 35.0%
!! GTAAATGAGTTTGCTGCTAA+GGG + chr3_1:82436560-82436579 Msa0380620:CDS 35.0%
!! GAAAAGTGTTGAAAACAACC+AGG - chr3_1:82436732-82436751 None:intergenic 35.0%
CATTGCTACAAGTGAATTAG+AGG - chr3_1:82436830-82436849 None:intergenic 35.0%
CTCTAATTCACTTGTAGCAA+TGG + chr3_1:82436828-82436847 Msa0380620:CDS 35.0%
! AGTCCAAACCTCTCTTTTAT+TGG + chr3_1:82436991-82437010 Msa0380620:intron 35.0%
! ATGAAGTGCCAATAAAAGAG+AGG - chr3_1:82437002-82437021 None:intergenic 35.0%
TTACGGTTAGGAATCAAACT+CGG - chr3_1:82437152-82437171 None:intergenic 35.0%
!!! TGTGCTTCTTTTTTACGGTT+AGG - chr3_1:82437164-82437183 None:intergenic 35.0%
CAATAATCTTACAGAAGCTG+GGG - chr3_1:82437470-82437489 None:intergenic 35.0%
TTGAATAGGGAAACAAATGC+TGG + chr3_1:82437526-82437545 Msa0380620:CDS 35.0%
! TTAGGATTTTTCATGGGTTC+TGG + chr3_1:82437618-82437637 Msa0380620:three_prime_UTR 35.0%
GCATGATATCGAAGAACATT+AGG - chr3_1:82437761-82437780 None:intergenic 35.0%
AAGGGGAAGTGAAAAATAGT+GGG - chr3_1:82437823-82437842 None:intergenic 35.0%
AAAGGGGAAGTGAAAAATAG+TGG - chr3_1:82437824-82437843 None:intergenic 35.0%
AATTGGTTGGGTAGAAAAAG+GGG - chr3_1:82437840-82437859 None:intergenic 35.0%
! GTTGGTAGGTCAAGTATTTA+GGG - chr3_1:82437866-82437885 None:intergenic 35.0%
TTGACAAGTTTATTGAGGGT+TGG - chr3_1:82437884-82437903 None:intergenic 35.0%
AAGGGGAAGTGAAAAATAGT+GGG - chr3_1:82437823-82437842 None:intergenic 35.0%
AAAGGGGAAGTGAAAAATAG+TGG - chr3_1:82437824-82437843 None:intergenic 35.0%
AATTGGTTGGGTAGAAAAAG+GGG - chr3_1:82437840-82437859 None:intergenic 35.0%
! GTTGGTAGGTCAAGTATTTA+GGG - chr3_1:82437866-82437885 None:intergenic 35.0%
TTGACAAGTTTATTGAGGGT+TGG - chr3_1:82437884-82437903 None:intergenic 35.0%
TTCTACTAGTTCAAGACTAC+TGG - chr3_1:82438146-82438165 None:intergenic 35.0%
GACTCTTTGATCTCAACTTA+AGG + chr3_1:82438192-82438211 Msa0380620:three_prime_UTR 35.0%
TTGTGGATCATTCGAAACTA+AGG - chr3_1:82438351-82438370 None:intergenic 35.0%
TGGAATCCTAGTCTAATTCA+AGG - chr3_1:82438380-82438399 None:intergenic 35.0%
!!! TGTTGTAGCAAATTTTTGGC+TGG + chr3_1:82438422-82438441 Msa0380620:three_prime_UTR 35.0%
TCTCATCACTATACATCAAC+AGG + chr3_1:82438511-82438530 Msa0380620:three_prime_UTR 35.0%
CTCATCACTATACATCAACA+GGG + chr3_1:82438512-82438531 Msa0380620:three_prime_UTR 35.0%
!! TATTTGAGTTGTCTTGGTAC+TGG - chr3_1:82438596-82438615 None:intergenic 35.0%
!! GGTGTATATTTGAGTTGTCT+TGG - chr3_1:82438602-82438621 None:intergenic 35.0%
AGACAACTCAAATATACACC+AGG + chr3_1:82438602-82438621 Msa0380620:three_prime_UTR 35.0%
GACAACTCAAATATACACCA+GGG + chr3_1:82438603-82438622 Msa0380620:three_prime_UTR 35.0%
ACAACTCAAATATACACCAG+GGG + chr3_1:82438604-82438623 Msa0380620:three_prime_UTR 35.0%
ATTTGTAGATCAGGGTAGAA+GGG + chr3_1:82438658-82438677 Msa0380620:three_prime_UTR 35.0%
! GAAATTGGTCTGTCTTGTAT+AGG + chr3_1:82438702-82438721 Msa0380620:intron 35.0%
AGTGGCTATTGCAATTCAAA+TGG + chr3_1:82438845-82438864 Msa0380620:three_prime_UTR 35.0%
! ATTTTGCAAGATCGTGTGAA+TGG - chr3_1:82439143-82439162 None:intergenic 35.0%
! GTAGTTGCAGAAGAAGTATA+TGG + chr3_1:82439344-82439363 Msa0380620:three_prime_UTR 35.0%
GGTTTCTTCTAATGTTGGTA+TGG - chr3_1:82439548-82439567 None:intergenic 35.0%
ACCAACATTAGAAGAAACCA+AGG + chr3_1:82439549-82439568 Msa0380620:three_prime_UTR 35.0%
CCAACATTAGAAGAAACCAA+GGG + chr3_1:82439550-82439569 Msa0380620:three_prime_UTR 35.0%
TTGATACAAGAATCTTCCCT+TGG - chr3_1:82439569-82439588 None:intergenic 35.0%
! TTCCTTTTTGTGTGTTCTGA+AGG + chr3_1:82439619-82439638 Msa0380620:three_prime_UTR 35.0%
AGCTAATTGCAGTTGTTAAC+TGG + chr3_1:82439892-82439911 Msa0380620:three_prime_UTR 35.0%
AGCAGTAGTTGTTGTCCTTA+CGG + chr3_1:82425334-82425353 Msa0380620:five_prime_UTR 40.0%
AGTTGTGGAAAGAAAAGGGA+AGG - chr3_1:82425385-82425404 None:intergenic 40.0%
GGGTAGTTGTGGAAAGAAAA+GGG - chr3_1:82425389-82425408 None:intergenic 40.0%
AACTCTCGTACTACTATGGA+AGG + chr3_1:82425576-82425595 Msa0380620:five_prime_UTR 40.0%
TGAAAGTTGCGGTTCATGTA+CGG + chr3_1:82425616-82425635 Msa0380620:five_prime_UTR 40.0%
TACGTGGAAGAGATCTAGAT+CGG + chr3_1:82425820-82425839 Msa0380620:intron 40.0%
ACTCTGACCAAATCCAGAAA+TGG - chr3_1:82425954-82425973 None:intergenic 40.0%
GAGTGTAATCAAACATGGTC+AGG + chr3_1:82426340-82426359 Msa0380620:intron 40.0%
! CTAAAAGTGTGAACCCACTT+GGG + chr3_1:82426731-82426750 Msa0380620:intron 40.0%
! ATTCTCCTCGGCATCAATTT+TGG + chr3_1:82426814-82426833 Msa0380620:intron 40.0%
! GATCATGTTTATGGAAGCAC+TGG + chr3_1:82426901-82426920 Msa0380620:five_prime_UTR 40.0%
TCTTCAAACATGTCACTCGA+GGG - chr3_1:82426931-82426950 None:intergenic 40.0%
TTCTTCAAACATGTCACTCG+AGG - chr3_1:82426932-82426951 None:intergenic 40.0%
! TGTGTTTCTCCACTTGTTGA+TGG + chr3_1:82426952-82426971 Msa0380620:five_prime_UTR 40.0%
TGGAACAAACCATCAACAAG+TGG - chr3_1:82426964-82426983 None:intergenic 40.0%
!! CTTGTTGATGGTTTGTTCCA+AGG + chr3_1:82426964-82426983 Msa0380620:five_prime_UTR 40.0%
AATGCTACTGTTCTCGCATA+TGG + chr3_1:82426991-82427010 Msa0380620:five_prime_UTR 40.0%
! TTCTGGGAAAACATACACCA+TGG + chr3_1:82427107-82427126 Msa0380620:five_prime_UTR 40.0%
TCTGGGAAAACATACACCAT+GGG + chr3_1:82427108-82427127 Msa0380620:five_prime_UTR 40.0%
AAAACATACACCATGGGAAC+TGG + chr3_1:82427114-82427133 Msa0380620:five_prime_UTR 40.0%
AAACATACACCATGGGAACT+GGG + chr3_1:82427115-82427134 Msa0380620:five_prime_UTR 40.0%
TTCTTTAAACCCAGTTCCCA+TGG - chr3_1:82427127-82427146 None:intergenic 40.0%
ATGGGAACTGGGTTTAAAGA+AGG + chr3_1:82427126-82427145 Msa0380620:five_prime_UTR 40.0%
CATGCAACTGAAATTCACTC+TGG - chr3_1:82427218-82427237 None:intergenic 40.0%
GTTGCATGTTTCCTTTATCG+AGG + chr3_1:82427230-82427249 Msa0380620:five_prime_UTR 40.0%
! TCTGTTTTGCTCATTGAGGA+GGG - chr3_1:82427400-82427419 None:intergenic 40.0%
! TTCTGTTTTGCTCATTGAGG+AGG - chr3_1:82427401-82427420 None:intergenic 40.0%
GTCTCACGAATTTGTATTGG+CGG - chr3_1:82427466-82427485 None:intergenic 40.0%
!! AATGGTGTTATAACCCTTGC+AGG + chr3_1:82427490-82427509 Msa0380620:five_prime_UTR 40.0%
!! ATGGTGTTATAACCCTTGCA+GGG + chr3_1:82427491-82427510 Msa0380620:five_prime_UTR 40.0%
GCATTTCCAGCATCTAACAA+TGG + chr3_1:82427845-82427864 Msa0380620:intron 40.0%
CTCAATCCATTGTTAGATGC+TGG - chr3_1:82427854-82427873 None:intergenic 40.0%
TTATCCACCTACTTACTTGC+TGG + chr3_1:82428037-82428056 Msa0380620:intron 40.0%
! AATACTTTTCCCACTACGTG+GGG - chr3_1:82428150-82428169 None:intergenic 40.0%
GCGCATTTGCTCTAATGTTA+TGG - chr3_1:82428306-82428325 None:intergenic 40.0%
CTGCATTTAGTAGATCTTGC+CGG + chr3_1:82428392-82428411 Msa0380620:five_prime_UTR 40.0%
!!! TCTTTTAGCTCGTTCTGATC+CGG - chr3_1:82428414-82428433 None:intergenic 40.0%
TCAGAACGAGCTAAAAGAAC+AGG + chr3_1:82428416-82428435 Msa0380620:five_prime_UTR 40.0%
CAGAACGAGCTAAAAGAACA+GGG + chr3_1:82428417-82428436 Msa0380620:five_prime_UTR 40.0%
! GTCTGATGGTATGCGTTTTA+AGG + chr3_1:82428439-82428458 Msa0380620:five_prime_UTR 40.0%
!!! GATGGTATGCGTTTTAAGGA+AGG + chr3_1:82428443-82428462 Msa0380620:five_prime_UTR 40.0%
! TGGTGATGAAAAGAAGCGAA+AGG + chr3_1:82428601-82428620 Msa0380620:five_prime_UTR 40.0%
GATGAAAAGAAGCGAAAGGA+AGG + chr3_1:82428605-82428624 Msa0380620:five_prime_UTR 40.0%
ATAGGGACAGTAAACTTACC+AGG + chr3_1:82428642-82428661 Msa0380620:five_prime_UTR 40.0%
! TAGATGGATTCGGAGAAACA+GGG - chr3_1:82428779-82428798 None:intergenic 40.0%
ACATTCAGCTGCAAATAGTC+TGG - chr3_1:82428891-82428910 None:intergenic 40.0%
! GATTTTGCAGGATTCACTTG+GGG + chr3_1:82429063-82429082 Msa0380620:intron 40.0%
! ATTTTGCAGGATTCACTTGG+GGG + chr3_1:82429064-82429083 Msa0380620:intron 40.0%
AACAGCAGAACTGTCATGAT+AGG + chr3_1:82429088-82429107 Msa0380620:five_prime_UTR 40.0%
TTGTACCTTAAGGCTCTGTT+TGG + chr3_1:82429127-82429146 Msa0380620:intron 40.0%
GTAACACGAAAAGCTCTGTT+TGG - chr3_1:82429383-82429402 None:intergenic 40.0%
AATATCAGCAGGACTTATGC+AGG - chr3_1:82429748-82429767 None:intergenic 40.0%
TCCTGCTGATATTAATGCTG+AGG + chr3_1:82429755-82429774 Msa0380620:five_prime_UTR 40.0%
TCCTCAGCATTAATATCAGC+AGG - chr3_1:82429759-82429778 None:intergenic 40.0%
TCTGAGGAAGTTCAGGTATT+TGG + chr3_1:82430035-82430054 Msa0380620:intron 40.0%
TTCCTATAATAGCCTACTGG+TGG + chr3_1:82430106-82430125 Msa0380620:intron 40.0%
ACACAGTGATGAGGATTGAT+TGG - chr3_1:82430169-82430188 None:intergenic 40.0%
TACGGTGTTCATGAAGTTCA+CGG - chr3_1:82430444-82430463 None:intergenic 40.0%
ATCAGCTACTGTGATAGGTA+AGG - chr3_1:82430733-82430752 None:intergenic 40.0%
GGATAATCAGCTACTGTGAT+AGG - chr3_1:82430738-82430757 None:intergenic 40.0%
TATCCAGTGAATGAAACAGC+AGG + chr3_1:82430753-82430772 Msa0380620:five_prime_UTR 40.0%
!! TCATTTTAGCAGGTGATTCC+AGG + chr3_1:82430922-82430941 Msa0380620:intron 40.0%
!! CATTTTAGCAGGTGATTCCA+GGG + chr3_1:82430923-82430942 Msa0380620:intron 40.0%
! TGCTACTTCTTCAATTTCCC+TGG - chr3_1:82430943-82430962 None:intergenic 40.0%
! ATTTTCACTGGTGCGTAATG+TGG - chr3_1:82431117-82431136 None:intergenic 40.0%
CATATAACTTATGCCGGTCA+TGG - chr3_1:82431165-82431184 None:intergenic 40.0%
CTGTTTGAGTACTTCAGCAT+CGG - chr3_1:82431489-82431508 None:intergenic 40.0%
! GAAGTACTCAAACAGCACTT+TGG + chr3_1:82431494-82431513 Msa0380620:five_prime_UTR 40.0%
TACTCAAACAGCACTTTGGA+AGG + chr3_1:82431498-82431517 Msa0380620:five_prime_UTR 40.0%
! GCACTTTGGAAGGAAGATAA+CGG + chr3_1:82431508-82431527 Msa0380620:five_prime_UTR 40.0%
! GCGAGAAAGAGATTGTCTTT+TGG + chr3_1:82431640-82431659 Msa0380620:intron 40.0%
! AAAGCACTTGAAGCACAAGT+GGG + chr3_1:82431737-82431756 Msa0380620:intron 40.0%
!! AACATGCGGAGTTTTGACAA+GGG - chr3_1:82431861-82431880 None:intergenic 40.0%
!! TAACATGCGGAGTTTTGACA+AGG - chr3_1:82431862-82431881 None:intergenic 40.0%
ACAGTCTATAAAGGCCCAAA+AGG + chr3_1:82431978-82431997 Msa0380620:five_prime_UTR 40.0%
AACAAGAGGCAGAACAGTTT+CGG + chr3_1:82432104-82432123 Msa0380620:five_prime_UTR 40.0%
TTGAGATGTCATCGAGAAGT+AGG - chr3_1:82432210-82432229 None:intergenic 40.0%
TACTTCTCGATGACATCTCA+AGG + chr3_1:82432209-82432228 Msa0380620:intron 40.0%
TTGCAAGCTTAGGAGTAGTT+GGG - chr3_1:82432346-82432365 None:intergenic 40.0%
TTTGCAAGCTTAGGAGTAGT+TGG - chr3_1:82432347-82432366 None:intergenic 40.0%
TGCAAAACAGTTAAGGAAGG+AGG + chr3_1:82432466-82432485 Msa0380620:intron 40.0%
GCAAAACAGTTAAGGAAGGA+GGG + chr3_1:82432467-82432486 Msa0380620:intron 40.0%
TTTAAATCAGCGCCAGAGAA+TGG + chr3_1:82432526-82432545 Msa0380620:five_prime_UTR 40.0%
TGCTGATGTTGTTGCCTAAT+TGG + chr3_1:82432653-82432672 Msa0380620:intron 40.0%
GCTGATGTTGTTGCCTAATT+GGG + chr3_1:82432654-82432673 Msa0380620:intron 40.0%
CTGATGTTGTTGCCTAATTG+GGG + chr3_1:82432655-82432674 Msa0380620:intron 40.0%
! ACGAGGCATCTAAATATGCT+GGG + chr3_1:82433173-82433192 Msa0380620:intron 40.0%
! TACAGCCACTTTGGTGATTA+GGG + chr3_1:82433416-82433435 Msa0380620:intron 40.0%
TATCCATGAGTACCATGTAC+AGG + chr3_1:82433559-82433578 Msa0380620:intron 40.0%
TACAGGCATGGTATCAGATA+CGG + chr3_1:82433576-82433595 Msa0380620:intron 40.0%
!!! ACGGGTATCGACTTCAATTT+TGG + chr3_1:82433595-82433614 Msa0380620:intron 40.0%
AGCTTCTAGCAACTCTCAAA+AGG - chr3_1:82433655-82433674 None:intergenic 40.0%
TTCAAATGTGGATGCTGTCT+CGG - chr3_1:82433692-82433711 None:intergenic 40.0%
CATAAAAAAACTGTGGCTGC+TGG + chr3_1:82433728-82433747 Msa0380620:intron 40.0%
! CTACAGCCACTTTGGTTATT+AGG + chr3_1:82433801-82433820 Msa0380620:intron 40.0%
TGGAGACCTAATAACCAAAG+TGG - chr3_1:82433810-82433829 None:intergenic 40.0%
TGGTTATTAGGTCTCCACTT+AGG + chr3_1:82433813-82433832 Msa0380620:intron 40.0%
GAAAACTGAAGAAGCTGCAA+TGG + chr3_1:82434272-82434291 Msa0380620:five_prime_UTR 40.0%
AATGGCAACCAAGAGGTTAA+AGG + chr3_1:82434290-82434309 Msa0380620:five_prime_UTR 40.0%
AAGCAACTCCTTTAACCTCT+TGG - chr3_1:82434301-82434320 None:intergenic 40.0%
GAAGGAAGAAGATGAAGAGA+GGG - chr3_1:82434579-82434598 None:intergenic 40.0%
! TAACATGAAGAAGTGGTGGA+AGG - chr3_1:82434597-82434616 None:intergenic 40.0%
TGAGATGATTCATTCGATGC+TGG - chr3_1:82435144-82435163 None:intergenic 40.0%
TTGTTCTCAATTCCCATGAC+AGG + chr3_1:82435167-82435186 Msa0380620:intron 40.0%
AGGAACATCAGAGAGGAATT+GGG + chr3_1:82435187-82435206 Msa0380620:intron 40.0%
! GATTCAGCTTTTCTGCATCT+GGG - chr3_1:82435467-82435486 None:intergenic 40.0%
GGGTTTGATTCCGAATTTGT+TGG + chr3_1:82435558-82435577 Msa0380620:intron 40.0%
AAGGTGAACCACATTAAAGG+TGG - chr3_1:82435846-82435865 None:intergenic 40.0%
CTGGAAAGTGACATAGAATG+AGG - chr3_1:82436144-82436163 None:intergenic 40.0%
CACTTTCCAGTTGCAACAAA+TGG + chr3_1:82436154-82436173 Msa0380620:intron 40.0%
! CCATTTCCATTTGTTGCAAC+TGG - chr3_1:82436163-82436182 None:intergenic 40.0%
CCAGTTGCAACAAATGGAAA+TGG + chr3_1:82436160-82436179 Msa0380620:intron 40.0%
GCAATGAGAAGTCCTTACAA+CGG + chr3_1:82436334-82436353 Msa0380620:intron 40.0%
TGATCACGAACTAGAAGTCA+TGG + chr3_1:82436362-82436381 Msa0380620:intron 40.0%
TTGCACTCAATATCGTTCCA+AGG - chr3_1:82436685-82436704 None:intergenic 40.0%
AAGTATAACATCTGTCGTCC+TGG + chr3_1:82436711-82436730 Msa0380620:intron 40.0%
TTAACTCTGTTGGAGATGCT+AGG + chr3_1:82436959-82436978 Msa0380620:intron 40.0%
AAGAGAGGTTTGGACTAAGA+GGG - chr3_1:82436987-82437006 None:intergenic 40.0%
AAAGAGAGGTTTGGACTAAG+AGG - chr3_1:82436988-82437007 None:intergenic 40.0%
GTGCCAATAAAAGAGAGGTT+TGG - chr3_1:82436997-82437016 None:intergenic 40.0%
TAGCATAAGTTGTTGGTGTG+CGG + chr3_1:82437105-82437124 Msa0380620:intron 40.0%
! AAGAACTTGTCGGTCTTTTG+CGG + chr3_1:82437368-82437387 Msa0380620:CDS 40.0%
GCAAAGTGAGATGAAGAGAA+AGG + chr3_1:82437390-82437409 Msa0380620:CDS 40.0%
GAAGAGAAAGGAAACTGAGA+AGG + chr3_1:82437402-82437421 Msa0380620:CDS 40.0%
! AAAAATAGTGGGGGGAAACT+AGG - chr3_1:82437812-82437831 None:intergenic 40.0%
AGGGGAAGTGAAAAATAGTG+GGG - chr3_1:82437822-82437841 None:intergenic 40.0%
!! GGTTGGTAGGTCAAGTATTT+AGG - chr3_1:82437867-82437886 None:intergenic 40.0%
! CAAGTTTATTGAGGGTTGGT+AGG - chr3_1:82437880-82437899 None:intergenic 40.0%
! AAAAATAGTGGGGGGAAACT+AGG - chr3_1:82437812-82437831 None:intergenic 40.0%
AGGGGAAGTGAAAAATAGTG+GGG - chr3_1:82437822-82437841 None:intergenic 40.0%
!! GGTTGGTAGGTCAAGTATTT+AGG - chr3_1:82437867-82437886 None:intergenic 40.0%
! CAAGTTTATTGAGGGTTGGT+AGG - chr3_1:82437880-82437899 None:intergenic 40.0%
CCTAGTCTAATTCAAGGAGA+CGG - chr3_1:82438374-82438393 None:intergenic 40.0%
TAATGGCTTAACGAGGGAAT+CGG + chr3_1:82438631-82438650 Msa0380620:three_prime_UTR 40.0%
ATCGGCATCATTTGTAGATC+AGG + chr3_1:82438649-82438668 Msa0380620:three_prime_UTR 40.0%
TCGGCATCATTTGTAGATCA+GGG + chr3_1:82438650-82438669 Msa0380620:three_prime_UTR 40.0%
CATTTGTAGATCAGGGTAGA+AGG + chr3_1:82438657-82438676 Msa0380620:three_prime_UTR 40.0%
GGAAAAGAAGTCATCATCAG+TGG + chr3_1:82438827-82438846 Msa0380620:three_prime_UTR 40.0%
TATAGAAACAGCAACTGTGC+TGG - chr3_1:82438989-82439008 None:intergenic 40.0%
! GCATTTGAAATAACAGCGCT+AGG + chr3_1:82439051-82439070 Msa0380620:three_prime_UTR 40.0%
TTAGATTCTGCCACAGTTCT+TGG + chr3_1:82439510-82439529 Msa0380620:three_prime_UTR 40.0%
CCCTTGGTTTCTTCTAATGT+TGG - chr3_1:82439553-82439572 None:intergenic 40.0%
GACCTTCAGAACACACAAAA+AGG - chr3_1:82439624-82439643 None:intergenic 40.0%
GAGTATGAGCAGTAACCGTA+AGG - chr3_1:82425352-82425371 None:intergenic 45.0%
GGGGTAGTTGTGGAAAGAAA+AGG - chr3_1:82425390-82425409 None:intergenic 45.0%
AGAGTGTGTGTGAAAGAGGA+GGG - chr3_1:82425410-82425429 None:intergenic 45.0%
! AGAGAGAGTGTGTGTGAAAG+AGG - chr3_1:82425414-82425433 None:intergenic 45.0%
ATATGACTGAGCTGCTGAAG+TGG - chr3_1:82425492-82425511 None:intergenic 45.0%
TCTCGTACTACTATGGAAGG+AGG + chr3_1:82425579-82425598 Msa0380620:five_prime_UTR 45.0%
CTCGTACTACTATGGAAGGA+GGG + chr3_1:82425580-82425599 Msa0380620:five_prime_UTR 45.0%
TCGTACTACTATGGAAGGAG+GGG + chr3_1:82425581-82425600 Msa0380620:five_prime_UTR 45.0%
TCATGTACGGCCATTAATCG+CGG + chr3_1:82425629-82425648 Msa0380620:five_prime_UTR 45.0%
!! GTTGATAGTGTATGCACCTG+AGG - chr3_1:82425705-82425724 None:intergenic 45.0%
! GCTAAAAGTGTGAACCCACT+TGG + chr3_1:82426730-82426749 Msa0380620:intron 45.0%
! TTGGTCTAGTGGTGTTAGCT+TGG + chr3_1:82426754-82426773 Msa0380620:intron 45.0%
! TGGTCTAGTGGTGTTAGCTT+GGG + chr3_1:82426755-82426774 Msa0380620:intron 45.0%
ATCAAACCTGAGACCTTGAG+AGG - chr3_1:82426796-82426815 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCCT+CGG + chr3_1:82426802-82426821 Msa0380620:intron 45.0%
AACCTCCAAAATTGATGCCG+AGG - chr3_1:82426822-82426841 None:intergenic 45.0%
TACTGTTCTCGCATATGGTC+AGG + chr3_1:82426996-82427015 Msa0380620:five_prime_UTR 45.0%
ACTTCATTGCAGACAGGTTC+TGG + chr3_1:82427090-82427109 Msa0380620:intron 45.0%
CTTCATTGCAGACAGGTTCT+GGG + chr3_1:82427091-82427110 Msa0380620:intron 45.0%
GAAACTGCAAATGGACATGC+AGG + chr3_1:82427418-82427437 Msa0380620:five_prime_UTR 45.0%
GATCCTCAAGTAGAGCAACT+GGG + chr3_1:82427569-82427588 Msa0380620:five_prime_UTR 45.0%
GCATGGCCACAAAACATGAT+TGG + chr3_1:82427716-82427735 Msa0380620:intron 45.0%
! ACCTACTTACTTGCTGGTCT+CGG + chr3_1:82428043-82428062 Msa0380620:intron 45.0%
TGGTGAAGATGGCATGAGAT+CGG - chr3_1:82428286-82428305 None:intergenic 45.0%
GCTAAAAGAACAGGGTCTGA+TGG + chr3_1:82428425-82428444 Msa0380620:five_prime_UTR 45.0%
AACAAAGGCCTTCTAGCACT+TGG + chr3_1:82428560-82428579 Msa0380620:five_prime_UTR 45.0%
ATTCGGAGAAACAGGGGATA+TGG - chr3_1:82428772-82428791 None:intergenic 45.0%
! AGATGGATTCGGAGAAACAG+GGG - chr3_1:82428778-82428797 None:intergenic 45.0%
! GTAGATGGATTCGGAGAAAC+AGG - chr3_1:82428780-82428799 None:intergenic 45.0%
AAGGCCATTTAGGCTCTGTT+TGG - chr3_1:82429480-82429499 None:intergenic 45.0%
! ACAACAACTGGAGTGTTTGC+AGG + chr3_1:82429983-82430002 Msa0380620:five_prime_UTR 45.0%
TGCCACCAGTAGGCTATTAT+AGG - chr3_1:82430111-82430130 None:intergenic 45.0%
ACACAGTGATCCGGATTGAT+TGG - chr3_1:82430242-82430261 None:intergenic 45.0%
GTTCATGAAGTTCACGGCAA+AGG - chr3_1:82430438-82430457 None:intergenic 45.0%
AGGCACATGCATTGTGAAGA+CGG + chr3_1:82430692-82430711 Msa0380620:five_prime_UTR 45.0%
ACATGCATTGTGAAGACGGA+TGG + chr3_1:82430696-82430715 Msa0380620:five_prime_UTR 45.0%
CATGCATTGTGAAGACGGAT+GGG + chr3_1:82430697-82430716 Msa0380620:five_prime_UTR 45.0%
! TGAAGACGGATGGGCTTAAA+AGG + chr3_1:82430706-82430725 Msa0380620:five_prime_UTR 45.0%
!! TTGCCTGCTGTTTCATTCAC+TGG - chr3_1:82430759-82430778 None:intergenic 45.0%
GCAGAGAAAGAGCTAGACAA+AGG - chr3_1:82430851-82430870 None:intergenic 45.0%
TAAACGCTTGGAGCAGAAAG+AGG + chr3_1:82431022-82431041 Msa0380620:five_prime_UTR 45.0%
AAATATCAGATCCGTCGCAG+AGG + chr3_1:82431288-82431307 Msa0380620:intron 45.0%
! CAGTCTGAGATGAAGCTGTT+TGG + chr3_1:82431458-82431477 Msa0380620:intron 45.0%
AGATGAGAAGAGAACAGTGC+AGG + chr3_1:82431538-82431557 Msa0380620:five_prime_UTR 45.0%
AATCTTGCTGCCAACTCTGA+TGG + chr3_1:82431674-82431693 Msa0380620:five_prime_UTR 45.0%
CTGTGTTTGTCCATCAGAGT+TGG - chr3_1:82431687-82431706 None:intergenic 45.0%
!! GAAAGCACTTGAAGCACAAG+TGG + chr3_1:82431736-82431755 Msa0380620:intron 45.0%
GAAGAAGAAGCAAGAGAGTC+AGG + chr3_1:82431894-82431913 Msa0380620:five_prime_UTR 45.0%
AAAGCGATGAAGCAACGAAG+AGG + chr3_1:82431941-82431960 Msa0380620:five_prime_UTR 45.0%
! GGTGCTGAATGTTCATTAGC+TGG + chr3_1:82432230-82432249 Msa0380620:intron 45.0%
CGATAATTCATGCGGAGTAG+AGG + chr3_1:82432317-82432336 Msa0380620:intron 45.0%
GCAAAGACAGAATCAATGCG+AGG - chr3_1:82432449-82432468 None:intergenic 45.0%
GGCTTAAGATCACCCCAATT+AGG - chr3_1:82432670-82432689 None:intergenic 45.0%
TAGCAGGAGAAACTGTTGAG+TGG - chr3_1:82432708-82432727 None:intergenic 45.0%
AAGACTTGAGGAAATTGGGG+TGG + chr3_1:82432860-82432879 Msa0380620:intron 45.0%
AGACTTGAGGAAATTGGGGT+GGG + chr3_1:82432861-82432880 Msa0380620:intron 45.0%
!!! ACAGTTTTTTCCCCTACCCA+TGG + chr3_1:82432884-82432903 Msa0380620:intron 45.0%
GAAAGACGAAAGAAGGCCAT+GGG - chr3_1:82432903-82432922 None:intergenic 45.0%
! GACGAGGCATCTAAATATGC+TGG + chr3_1:82433172-82433191 Msa0380620:intron 45.0%
GTGGTAAGAATTCCACGTTG+TGG - chr3_1:82433391-82433410 None:intergenic 45.0%
CCAAAGTGGCTGTAGTTTAG+TGG - chr3_1:82433410-82433429 None:intergenic 45.0%
CCACTAAACTACAGCCACTT+TGG + chr3_1:82433407-82433426 Msa0380620:intron 45.0%
! CTACAGCCACTTTGGTGATT+AGG + chr3_1:82433415-82433434 Msa0380620:intron 45.0%
ATGCCTGTACATGGTACTCA+TGG - chr3_1:82433565-82433584 None:intergenic 45.0%
ATGAGTACCATGTACAGGCA+TGG + chr3_1:82433564-82433583 Msa0380620:intron 45.0%
TCTGATACCATGCCTGTACA+TGG - chr3_1:82433574-82433593 None:intergenic 45.0%
ACAGGCATGGTATCAGATAC+GGG + chr3_1:82433577-82433596 Msa0380620:intron 45.0%
GTGGTAAGAATTCCACGTTG+TGG - chr3_1:82433391-82433410 None:intergenic 45.0%
CCAAAGTGGCTGTAGTTTAG+TGG - chr3_1:82433410-82433429 None:intergenic 45.0%
CCACTAAACTACAGCCACTT+TGG + chr3_1:82433407-82433426 Msa0380620:intron 45.0%
GGAAGGAAGAAGATGAAGAG+AGG - chr3_1:82434580-82434599 None:intergenic 45.0%
GCGAGCGAGATTAAATTGTG+AGG - chr3_1:82435006-82435025 None:intergenic 45.0%
TTTAATCTCGCTCGCTTGCT+CGG + chr3_1:82435011-82435030 Msa0380620:intron 45.0%
! GATGGAGTATCAGAAGCTCA+AGG - chr3_1:82435068-82435087 None:intergenic 45.0%
CTCTCTGATGTTCCTGTCAT+GGG - chr3_1:82435182-82435201 None:intergenic 45.0%
CAGGAACATCAGAGAGGAAT+TGG + chr3_1:82435186-82435205 Msa0380620:intron 45.0%
GGTATAAGATTGAGAAGCCC+TGG + chr3_1:82435280-82435299 Msa0380620:intron 45.0%
! GGATTCAGCTTTTCTGCATC+TGG - chr3_1:82435468-82435487 None:intergenic 45.0%
ACATTAAAGGTGGTCCACCA+TGG - chr3_1:82435836-82435855 None:intergenic 45.0%
!! ATGGTGGACCACCTTTAATG+TGG + chr3_1:82435835-82435854 Msa0380620:intron 45.0%
TGGAAATGGAACAAATGGGC+AGG + chr3_1:82436174-82436193 Msa0380620:CDS 45.0%
AAGGCAACCTAAGAAGGGAA+TGG - chr3_1:82436211-82436230 None:intergenic 45.0%
ATGAGAAGTCCTTACAACGG+TGG + chr3_1:82436337-82436356 Msa0380620:intron 45.0%
AATCCATTCTTCCCTCTTGG+AGG - chr3_1:82436593-82436612 None:intergenic 45.0%
GCAAATCCATTCTTCCCTCT+TGG - chr3_1:82436596-82436615 None:intergenic 45.0%
! CATTCTTGCACTTGGTGACA+TGG - chr3_1:82436770-82436789 None:intergenic 45.0%
CATGTCACCAAGTGCAAGAA+TGG + chr3_1:82436768-82436787 Msa0380620:CDS 45.0%
ATTCTCGCCATTCTTGCACT+TGG - chr3_1:82436778-82436797 None:intergenic 45.0%
TTGGAATCAGTTGCGCTCAA+TGG + chr3_1:82436906-82436925 Msa0380620:CDS 45.0%
TGGAATCAGTTGCGCTCAAT+GGG + chr3_1:82436907-82436926 Msa0380620:CDS 45.0%
TGGGGTCTAGCATAAGTTGT+TGG + chr3_1:82437098-82437117 Msa0380620:intron 45.0%
AGCATAAGTTGTTGGTGTGC+GGG + chr3_1:82437106-82437125 Msa0380620:intron 45.0%
CTAAAAGTGAGAGAGCAAGC+TGG + chr3_1:82437427-82437446 Msa0380620:CDS 45.0%
! GGGAAGTGAAAAATAGTGGG+GGG - chr3_1:82437820-82437839 None:intergenic 45.0%
GGGGAAGTGAAAAATAGTGG+GGG - chr3_1:82437821-82437840 None:intergenic 45.0%
! GGGAAGTGAAAAATAGTGGG+GGG - chr3_1:82437820-82437839 None:intergenic 45.0%
GGGGAAGTGAAAAATAGTGG+GGG - chr3_1:82437821-82437840 None:intergenic 45.0%
GTTACTGTCTCCTGAATCAG+CGG + chr3_1:82438231-82438250 Msa0380620:three_prime_UTR 45.0%
CTAATTCAAGGAGACGGTTG+TGG - chr3_1:82438368-82438387 None:intergenic 45.0%
CCGTCTCCTTGAATTAGACT+AGG + chr3_1:82438371-82438390 Msa0380620:three_prime_UTR 45.0%
!! CTTGGTACTGGTACAGACAT+TGG - chr3_1:82438584-82438603 None:intergenic 45.0%
TATACACCAGGGGTTGCTAA+TGG + chr3_1:82438614-82438633 Msa0380620:three_prime_UTR 45.0%
GGTTGCTAATGGCTTAACGA+GGG + chr3_1:82438625-82438644 Msa0380620:three_prime_UTR 45.0%
TTCATTGACAGCTGCCCAAT+GGG - chr3_1:82438763-82438782 None:intergenic 45.0%
TTTCATTGACAGCTGCCCAA+TGG - chr3_1:82438764-82438783 None:intergenic 45.0%
GCAATTGTAGGACAAGCTTC+TGG + chr3_1:82438790-82438809 Msa0380620:three_prime_UTR 45.0%
GACAAGCTTCTGGCAAGTTA+TGG + chr3_1:82438800-82438819 Msa0380620:three_prime_UTR 45.0%
AAGCTTCTGGCAAGTTATGG+AGG + chr3_1:82438803-82438822 Msa0380620:three_prime_UTR 45.0%
AATGGAAGTGGCAGAAACCA+TGG + chr3_1:82438863-82438882 Msa0380620:three_prime_UTR 45.0%
AGACCCACCAGAATTATCCT+AGG + chr3_1:82439014-82439033 Msa0380620:three_prime_UTR 45.0%
GTGCCTAGGATAATTCTGGT+GGG - chr3_1:82439020-82439039 None:intergenic 45.0%
TGTGCCTAGGATAATTCTGG+TGG - chr3_1:82439021-82439040 None:intergenic 45.0%
CCATGTGCCTAGGATAATTC+TGG - chr3_1:82439024-82439043 None:intergenic 45.0%
CCAGAATTATCCTAGGCACA+TGG + chr3_1:82439021-82439040 Msa0380620:three_prime_UTR 45.0%
ATCCTAGGCACATGGCAAAA+TGG + chr3_1:82439029-82439048 Msa0380620:three_prime_UTR 45.0%
GAAATAACAGCGCTAGGTAC+AGG + chr3_1:82439057-82439076 Msa0380620:three_prime_UTR 45.0%
GAATAATGCCGTCCAGATCT+TGG + chr3_1:82439376-82439395 Msa0380620:three_prime_UTR 45.0%
! GGAACATCTTAGGAAGTGTG+CGG + chr3_1:82439425-82439444 Msa0380620:three_prime_UTR 45.0%
GCTGTAGCATGTTACATACC+AGG + chr3_1:82439686-82439705 Msa0380620:three_prime_UTR 45.0%
GTAGCATGTTACATACCAGG+AGG + chr3_1:82439689-82439708 Msa0380620:three_prime_UTR 45.0%
CCTACAGAAGAATTTCCTCC+TGG - chr3_1:82439707-82439726 None:intergenic 45.0%
CCAGGAGGAAATTCTTCTGT+AGG + chr3_1:82439704-82439723 Msa0380620:three_prime_UTR 45.0%
!!! TATTTTTCAAAATAAAAAAT+TGG - chr3_1:82434092-82434111 None:intergenic 5.0%
!!! TATTTTTAAAAAAATATCAA+AGG + chr3_1:82435784-82435803 Msa0380620:intron 5.0%
!!! ATTTTTAAAAAAATATCAAA+GGG + chr3_1:82435785-82435804 Msa0380620:intron 5.0%
!! TAAAATTAAATGAATTTATA+AGG + chr3_1:82435809-82435828 Msa0380620:intron 5.0%
!! TTAAATAAATAAATTAACAA+GGG - chr3_1:82439089-82439108 None:intergenic 5.0%
!! ATTAAATAAATAAATTAACA+AGG - chr3_1:82439090-82439109 None:intergenic 5.0%
!!! TATTTTATTTTTATTGAATA+AGG + chr3_1:82439793-82439812 Msa0380620:three_prime_UTR 5.0%
TGAAAGAGGAGGGGTAGTTG+TGG - chr3_1:82425400-82425419 None:intergenic 50.0%
GAGTGTGTGTGAAAGAGGAG+GGG - chr3_1:82425409-82425428 None:intergenic 50.0%
! GAGAGTGTGTGTGAAAGAGG+AGG - chr3_1:82425411-82425430 None:intergenic 50.0%
AGCTTCTCGTCCGCGATTAA+TGG - chr3_1:82425642-82425661 None:intergenic 50.0%
ATTGTGTAGCCGTCGTTGCT+GGG + chr3_1:82425676-82425695 Msa0380620:five_prime_UTR 50.0%
AAGTGTGAACCCACTTGGGT+TGG + chr3_1:82426735-82426754 Msa0380620:intron 50.0%
ACCACTAGACCAACCCAAGT+GGG - chr3_1:82426747-82426766 None:intergenic 50.0%
! GTGGTGTTAGCTTGGGATCT+TGG + chr3_1:82426762-82426781 Msa0380620:intron 50.0%
CTTGGAATGTGCTCCTCTCA+AGG + chr3_1:82426780-82426799 Msa0380620:intron 50.0%
! CTCCTCGGCATCAATTTTGG+AGG + chr3_1:82426817-82426836 Msa0380620:intron 50.0%
CAGGAAAAACGTCCTCTCCT+GGG + chr3_1:82427437-82427456 Msa0380620:five_prime_UTR 50.0%
! ATTTGTATTGGCGGCTTCCC+AGG - chr3_1:82427457-82427476 None:intergenic 50.0%
GACTTCTGTAGACCCTGCAA+GGG - chr3_1:82427506-82427525 None:intergenic 50.0%
TGACTTCTGTAGACCCTGCA+AGG - chr3_1:82427507-82427526 None:intergenic 50.0%
TACTTGAGGATCCCTGTTCG+AGG - chr3_1:82427561-82427580 None:intergenic 50.0%
GGATCCTCAAGTAGAGCAAC+TGG + chr3_1:82427568-82427587 Msa0380620:five_prime_UTR 50.0%
! TCAGACTCTTGGACCGCTTT+TGG + chr3_1:82427690-82427709 Msa0380620:intron 50.0%
!! CAGACTCTTGGACCGCTTTT+GGG + chr3_1:82427691-82427710 Msa0380620:intron 50.0%
GAGACCAGCAAGTAAGTAGG+TGG - chr3_1:82428044-82428063 None:intergenic 50.0%
ACCGAGACCAGCAAGTAAGT+AGG - chr3_1:82428047-82428066 None:intergenic 50.0%
CTGTTAAGACCCCACGTAGT+GGG + chr3_1:82428138-82428157 Msa0380620:intron 50.0%
ATGGCATGAGATCGGCTAGT+TGG - chr3_1:82428278-82428297 None:intergenic 50.0%
AACTTCCTCAGATGAGCCAC+CGG - chr3_1:82430027-82430046 None:intergenic 50.0%
TGGCTCATCTGAGGAAGTTC+AGG + chr3_1:82430028-82430047 Msa0380620:five_prime_UTR 50.0%
AGCCTACTGGTGGCATTCAA+TGG + chr3_1:82430116-82430135 Msa0380620:intron 50.0%
AGCCATTGAATGCCACCAGT+AGG - chr3_1:82430121-82430140 None:intergenic 50.0%
! CTGCGACAGAGCATCTACTA+CGG - chr3_1:82430462-82430481 None:intergenic 50.0%
AGAACAGTTTCGGCAGTGGA+AGG + chr3_1:82432114-82432133 Msa0380620:five_prime_UTR 50.0%
ACGAAAGAAGGCCATGGGTA+GGG - chr3_1:82432898-82432917 None:intergenic 50.0%
GGAAAGACGAAAGAAGGCCA+TGG - chr3_1:82432904-82432923 None:intergenic 50.0%
AGAATTCCACGTTGTGGCCA+TGG - chr3_1:82433385-82433404 None:intergenic 50.0%
! CCACTTTGGTGATTAGGGCT+CGG + chr3_1:82433421-82433440 Msa0380620:intron 50.0%
GCAGTGTGCAAATGCTTCAG+TGG + chr3_1:82434201-82434220 Msa0380620:intron 50.0%
AAGCTGCAATGGCAACCAAG+AGG + chr3_1:82434283-82434302 Msa0380620:five_prime_UTR 50.0%
CCTCTCTGATGTTCCTGTCA+TGG - chr3_1:82435183-82435202 None:intergenic 50.0%
CCATGACAGGAACATCAGAG+AGG + chr3_1:82435180-82435199 Msa0380620:intron 50.0%
CTGGGTTGTTCTTCTGCATC+CGG - chr3_1:82435449-82435468 None:intergenic 50.0%
! GGTGTTGAAGGTTCACCGTA+AGG + chr3_1:82435732-82435751 Msa0380620:intron 50.0%
GTGATCAAGCCACCGTTGTA+AGG - chr3_1:82436349-82436368 None:intergenic 50.0%
! AATGGCTAGCTCCTCTGCAA+GGG - chr3_1:82436531-82436550 None:intergenic 50.0%
AGTCCTCCAAGAGGGAAGAA+TGG + chr3_1:82436587-82436606 Msa0380620:CDS 50.0%
! GAGGGAAGAATGGATTTGCC+AGG + chr3_1:82436597-82436616 Msa0380620:CDS 50.0%
! TCTTGCACTTGGTGACATGG+AGG - chr3_1:82436767-82436786 None:intergenic 50.0%
!! GAGAGGGCATTCACTAATCG+CGG + chr3_1:82436880-82436899 Msa0380620:CDS 50.0%
CATTCACTAATCGCGGACGT+TGG + chr3_1:82436887-82436906 Msa0380620:CDS 50.0%
CAACTTATGCTAGACCCCAG+TGG - chr3_1:82437097-82437116 None:intergenic 50.0%
GCATAAGTTGTTGGTGTGCG+GGG + chr3_1:82437107-82437126 Msa0380620:intron 50.0%
!! GCTCAAAAAGCCGCTGATTC+AGG - chr3_1:82438244-82438263 None:intergenic 50.0%
GTTAAGCCATTAGCAACCCC+TGG - chr3_1:82438623-82438642 None:intergenic 50.0%
GGGTTGCTAATGGCTTAACG+AGG + chr3_1:82438624-82438643 Msa0380620:three_prime_UTR 50.0%
CTTCTGGCAAGTTATGGAGG+TGG + chr3_1:82438806-82438825 Msa0380620:three_prime_UTR 50.0%
!!! TGCCATTTTGCCATGTGCCT+AGG - chr3_1:82439034-82439053 None:intergenic 50.0%
ATCGCGGACGAGAAGCTTCA+AGG + chr3_1:82425645-82425664 Msa0380620:five_prime_UTR 55.0%
GATTGTGTAGCCGTCGTTGC+TGG + chr3_1:82425675-82425694 Msa0380620:five_prime_UTR 55.0%
!! ACCCACTTGGGTTGGTCTAG+TGG + chr3_1:82426743-82426762 Msa0380620:intron 55.0%
CACCACTAGACCAACCCAAG+TGG - chr3_1:82426748-82426767 None:intergenic 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG + chr3_1:82426787-82426806 Msa0380620:intron 55.0%
GCAGGAAAAACGTCCTCTCC+TGG + chr3_1:82427436-82427455 Msa0380620:five_prime_UTR 55.0%
AATGGCTGCTTGCCTCGAAC+AGG + chr3_1:82427546-82427565 Msa0380620:five_prime_UTR 55.0%
ATGGCTGCTTGCCTCGAACA+GGG + chr3_1:82427547-82427566 Msa0380620:five_prime_UTR 55.0%
GCTCCCAGTTGCTCTACTTG+AGG - chr3_1:82427575-82427594 None:intergenic 55.0%
!! TGGACCGCTTTTGGGTAGCA+TGG + chr3_1:82427699-82427718 Msa0380620:intron 55.0%
GTGGCCATGCTACCCAAAAG+CGG - chr3_1:82427706-82427725 None:intergenic 55.0%
GCTGTTAAGACCCCACGTAG+TGG + chr3_1:82428137-82428156 Msa0380620:intron 55.0%
CAGCAGGCAAGTCTCGTCTT+TGG + chr3_1:82430769-82430788 Msa0380620:intron 55.0%
TGAAGCAACGAAGAGGCTGC+AGG + chr3_1:82431948-82431967 Msa0380620:five_prime_UTR 55.0%
AGGCAGAACAGTTTCGGCAG+TGG + chr3_1:82432110-82432129 Msa0380620:five_prime_UTR 55.0%
CGAAAGAAGGCCATGGGTAG+GGG - chr3_1:82432897-82432916 None:intergenic 55.0%
GACGAAAGAAGGCCATGGGT+AGG - chr3_1:82432899-82432918 None:intergenic 55.0%
CCGAGCCCTAATCACCAAAG+TGG - chr3_1:82433424-82433443 None:intergenic 55.0%
AATGTGGATGCTGTCTCGGC+TGG - chr3_1:82433688-82433707 None:intergenic 55.0%
AGAATTCCACGTTGTGGCCG+TGG - chr3_1:82433771-82433790 None:intergenic 55.0%
ACTTCCAGCCGAGACACTTC+AGG + chr3_1:82434333-82434352 Msa0380620:five_prime_UTR 55.0%
! CATACCTGAAGTGTCTCGGC+TGG - chr3_1:82434340-82434359 None:intergenic 55.0%
! GAATGGCTAGCTCCTCTGCA+AGG - chr3_1:82436532-82436551 None:intergenic 55.0%
AAGGGTCTCAGTCCTCCAAG+AGG + chr3_1:82436578-82436597 Msa0380620:CDS 55.0%
AGGGTCTCAGTCCTCCAAGA+GGG + chr3_1:82436579-82436598 Msa0380620:CDS 55.0%
! TGCACTTGGTGACATGGAGG+AGG - chr3_1:82436764-82436783 None:intergenic 55.0%
CCTCTCTCGCTCTTCTGCTT+CGG - chr3_1:82436866-82436885 None:intergenic 55.0%
CGAAGCAGAAGAGCGAGAGA+GGG + chr3_1:82436864-82436883 Msa0380620:CDS 55.0%
!! GCGGGGTGTTGTAGATTGTG+TGG + chr3_1:82437124-82437143 Msa0380620:intron 55.0%
CCATGTCCTTCTCCCAGAGT+TGG - chr3_1:82437321-82437340 None:intergenic 55.0%
! CCAACTCTGGGAGAAGGACA+TGG + chr3_1:82437318-82437337 Msa0380620:CDS 55.0%
GCAAGCTGGTGCAACCACAT+TGG + chr3_1:82437441-82437460 Msa0380620:CDS 55.0%
AGAAGCTGGGGTAGCCAATG+TGG - chr3_1:82437458-82437477 None:intergenic 55.0%
CTGAGGCTTCCCAGCAACGA+CGG - chr3_1:82425688-82425707 None:intergenic 60.0%
TATTGGCGGCTTCCCAGGAG+AGG - chr3_1:82427452-82427471 None:intergenic 60.0%
! GCAGAGCTTTGTGCTCGTGC+CGG + chr3_1:82430005-82430024 Msa0380620:five_prime_UTR 60.0%
GATTCGAGCCCAGGTCTCCA+TGG + chr3_1:82433365-82433384 Msa0380620:intron 60.0%
CGTTGTGGCCATGGAGACCT+GGG - chr3_1:82433376-82433395 None:intergenic 60.0%
ACGTTGTGGCCATGGAGACC+TGG - chr3_1:82433377-82433396 None:intergenic 60.0%
AGGTCTCCATGGCCACAACG+TGG + chr3_1:82433376-82433395 Msa0380620:intron 60.0%
GATTCGAGCCCAGGTCTCCA+CGG + chr3_1:82433365-82433384 Msa0380620:intron 60.0%
CCGAAGCAGAAGAGCGAGAG+AGG + chr3_1:82436863-82436882 Msa0380620:CDS 60.0%
! CAGGTGCCAACTCTGGGAGA+AGG + chr3_1:82437312-82437331 Msa0380620:intron 60.0%
TGTGGCAAAGCCTGTGAGCG+CGG - chr3_1:82438940-82438959 None:intergenic 60.0%
! GGAAGTGTGCGGCAACGTAC+AGG + chr3_1:82439436-82439455 Msa0380620:three_prime_UTR 60.0%
CGTCGTTGCTGGGAAGCCTC+AGG + chr3_1:82425686-82425705 Msa0380620:five_prime_UTR 65.0%
! GAGCTTTGTGCTCGTGCCGG+TGG + chr3_1:82430008-82430027 Msa0380620:five_prime_UTR 65.0%
! TCGTGCCGGTGGCTCATCTG+AGG + chr3_1:82430019-82430038 Msa0380620:five_prime_UTR 65.0%
CGTTGTGGCCGTGGAGACCT+GGG - chr3_1:82433762-82433781 None:intergenic 65.0%
ACGTTGTGGCCGTGGAGACC+TGG - chr3_1:82433763-82433782 None:intergenic 65.0%
AGGTCTCCACGGCCACAACG+TGG + chr3_1:82433762-82433781 Msa0380620:intron 65.0%
GAGAGCAAGACCGCGCTCAC+AGG + chr3_1:82438927-82438946 Msa0380620:three_prime_UTR 65.0%
GGCTGCTGGGATTCGAGCCC+AGG + chr3_1:82433356-82433375 Msa0380620:intron 70.0%
GGCTGCTGGGATTCGAGCCC+AGG + chr3_1:82433356-82433375 Msa0380620:intron 70.0%
CAGGCGAGCTGCCCTTGCAG+AGG + chr3_1:82436517-82436536 Msa0380620:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 82425307 82439920 82425307 ID=Msa0380620;Name=Msa0380620
chr3_1 mRNA 82425307 82439920 82425307 ID=Msa0380620-mRNA-1;Parent=Msa0380620;Name=Msa0380620-mRNA-1;_AED=0.09;_eAED=0.09;_QI=2394|0.91|0.96|1|0.91|0.84|25|1861|191
chr3_1 exon 82425307 82425707 82425307 ID=Msa0380620-mRNA-1:exon:21024;Parent=Msa0380620-mRNA-1
chr3_1 exon 82426871 82427017 82426871 ID=Msa0380620-mRNA-1:exon:21025;Parent=Msa0380620-mRNA-1
chr3_1 exon 82427102 82427251 82427102 ID=Msa0380620-mRNA-1:exon:21026;Parent=Msa0380620-mRNA-1
chr3_1 exon 82427364 82427617 82427364 ID=Msa0380620-mRNA-1:exon:21027;Parent=Msa0380620-mRNA-1
chr3_1 exon 82428283 82428464 82428283 ID=Msa0380620-mRNA-1:exon:21028;Parent=Msa0380620-mRNA-1
chr3_1 exon 82428549 82428673 82428549 ID=Msa0380620-mRNA-1:exon:21029;Parent=Msa0380620-mRNA-1
chr3_1 exon 82429073 82429109 82429073 ID=Msa0380620-mRNA-1:exon:21030;Parent=Msa0380620-mRNA-1
chr3_1 exon 82429745 82429836 82429745 ID=Msa0380620-mRNA-1:exon:21031;Parent=Msa0380620-mRNA-1
chr3_1 exon 82429942 82430049 82429942 ID=Msa0380620-mRNA-1:exon:21032;Parent=Msa0380620-mRNA-1
chr3_1 exon 82430391 82430504 82430391 ID=Msa0380620-mRNA-1:exon:21033;Parent=Msa0380620-mRNA-1
chr3_1 exon 82430687 82430774 82430687 ID=Msa0380620-mRNA-1:exon:21034;Parent=Msa0380620-mRNA-1
chr3_1 exon 82430934 82431043 82430934 ID=Msa0380620-mRNA-1:exon:21035;Parent=Msa0380620-mRNA-1
chr3_1 exon 82431461 82431559 82431461 ID=Msa0380620-mRNA-1:exon:21036;Parent=Msa0380620-mRNA-1
chr3_1 exon 82431641 82431754 82431641 ID=Msa0380620-mRNA-1:exon:21037;Parent=Msa0380620-mRNA-1
chr3_1 exon 82431883 82431999 82431883 ID=Msa0380620-mRNA-1:exon:21038;Parent=Msa0380620-mRNA-1
chr3_1 exon 82432082 82432162 82432082 ID=Msa0380620-mRNA-1:exon:21039;Parent=Msa0380620-mRNA-1
chr3_1 exon 82432476 82432547 82432476 ID=Msa0380620-mRNA-1:exon:21040;Parent=Msa0380620-mRNA-1
chr3_1 exon 82434261 82434354 82434261 ID=Msa0380620-mRNA-1:exon:21041;Parent=Msa0380620-mRNA-1
chr3_1 exon 82436164 82436195 82436164 ID=Msa0380620-mRNA-1:exon:21042;Parent=Msa0380620-mRNA-1
chr3_1 exon 82436520 82436618 82436520 ID=Msa0380620-mRNA-1:exon:21043;Parent=Msa0380620-mRNA-1
chr3_1 exon 82436759 82436956 82436759 ID=Msa0380620-mRNA-1:exon:21044;Parent=Msa0380620-mRNA-1
chr3_1 exon 82437315 82437909 82437315 ID=Msa0380620-mRNA-1:exon:21045;Parent=Msa0380620-mRNA-1
chr3_1 exon 82438070 82438679 82438070 ID=Msa0380620-mRNA-1:exon:21046;Parent=Msa0380620-mRNA-1
chr3_1 exon 82438754 82439078 82438754 ID=Msa0380620-mRNA-1:exon:21047;Parent=Msa0380620-mRNA-1
chr3_1 exon 82439334 82439920 82439334 ID=Msa0380620-mRNA-1:exon:21048;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82425307 82425707 82425307 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82426871 82427017 82426871 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82427102 82427251 82427102 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82427364 82427617 82427364 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82428283 82428464 82428283 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82428549 82428673 82428549 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82429073 82429109 82429073 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82429745 82429836 82429745 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82429942 82430049 82429942 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82430391 82430504 82430391 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82430687 82430774 82430687 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82430934 82431043 82430934 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82431461 82431559 82431461 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82431641 82431754 82431641 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82431883 82431999 82431883 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82432082 82432162 82432082 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82432476 82432547 82432476 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82434261 82434354 82434261 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 five_prime_UTR 82436164 82436172 82436164 ID=Msa0380620-mRNA-1:five_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 CDS 82436173 82436195 82436173 ID=Msa0380620-mRNA-1:cds;Parent=Msa0380620-mRNA-1
chr3_1 CDS 82436520 82436618 82436520 ID=Msa0380620-mRNA-1:cds;Parent=Msa0380620-mRNA-1
chr3_1 CDS 82436759 82436956 82436759 ID=Msa0380620-mRNA-1:cds;Parent=Msa0380620-mRNA-1
chr3_1 CDS 82437315 82437570 82437315 ID=Msa0380620-mRNA-1:cds;Parent=Msa0380620-mRNA-1
chr3_1 three_prime_UTR 82437571 82437909 82437571 ID=Msa0380620-mRNA-1:three_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 three_prime_UTR 82438070 82438679 82438070 ID=Msa0380620-mRNA-1:three_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 three_prime_UTR 82438754 82439078 82438754 ID=Msa0380620-mRNA-1:three_prime_utr;Parent=Msa0380620-mRNA-1
chr3_1 three_prime_UTR 82439334 82439920 82439334 ID=Msa0380620-mRNA-1:three_prime_utr;Parent=Msa0380620-mRNA-1
Gene Sequence

>Msa0380620

ATGGAAATGGAACAAATGGGCAGGCGAGCTGCCCTTGCAGAGGAGCTAGCCATTCTGAAGCATGTAAATGAGTTTGCTGCTAAGGGTCTCAGTCCTCCAAGAGGGAAGAATGGATTTGCCAGGGCCTCCTCCATGTCACCAAGTGCAAGAATGGCGAGAATAGCTTCACTTGAGAGCATGCTGAGTATATCCTCTAATTCACTTGTAGCAATGGCTTCTCAACTTTCCGAAGCAGAAGAGCGAGAGAGGGCATTCACTAATCGCGGACGTTGGAATCAGTTGCGCTCAATGGGAGATGCCAAGAATTTGCTTCAATCTATGTGCCAACTCTGGGAGAAGGACATGGAGATCAGAGAAATGAAAGATCAAATCAAAGAACTTGTCGGTCTTTTGCGGCAAAGTGAGATGAAGAGAAAGGAAACTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGGTGCAACCACATTGGCTACCCCAGCTTCTGTAAGATTATTGTTACTTTGTGAGGCATTATACGCAAGTAAGAATGCTTTGAATAGGGAAACAAATGCTGGAACTTTATACCTCAAGACTTAA
Protein sequence

>Msa0380620

MEMEQMGRRAALAEELAILKHVNEFAAKGLSPPRGKNGFARASSMSPSARMARIASLESMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGDAKNLLQSMCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKETEKELKVREQAGATTLATPASVRLLLLCEALYASKNALNRETNAGTLYLKT*