AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0609980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609980 MtrunA17_Chr4g0042711 98.028 507 10 0 1 507 1 507 0.0 1042
Msa0609980 MtrunA17_Chr5g0417871 79.835 486 91 3 28 506 9 494 0.0 822
Msa0609980 MtrunA17_Chr6g0455571 59.298 484 193 3 8 488 25 507 0.0 604
Msa0609980 MtrunA17_Chr4g0061781 61.884 467 170 3 29 488 43 508 0.0 603
Msa0609980 MtrunA17_Chr2g0307971 57.980 495 198 4 8 499 30 517 0.0 597
Msa0609980 MtrunA17_Chr5g0426591 48.675 415 201 4 87 489 97 511 2.03e-140 414
Msa0609980 MtrunA17_Chr4g0070551 48.485 396 197 5 97 490 228 618 1.20e-135 405
Msa0609980 MtrunA17_Chr4g0008451 48.371 399 199 5 97 493 232 625 3.28e-134 402
Msa0609980 MtrunA17_Chr3g0132371 47.952 415 201 5 87 489 127 538 1.62e-131 392
Msa0609980 MtrunA17_Chr5g0436321 46.599 397 205 5 96 490 160 551 1.53e-129 388
Msa0609980 MtrunA17_Chr3g0129981 45.735 422 200 8 87 489 100 511 1.15e-124 374
Msa0609980 MtrunA17_Chr3g0143821 43.358 399 207 9 98 492 112 495 6.73e-100 312
Msa0609980 MtrunA17_Chr5g0399311 42.410 415 214 10 92 499 119 515 3.61e-99 308
Msa0609980 MtrunA17_Chr4g0056061 40.876 411 220 8 93 497 104 497 2.76e-98 306
Msa0609980 MtrunA17_Chr5g0448581 42.476 412 217 9 100 505 122 519 2.56e-97 305
Msa0609980 MtrunA17_Chr1g0204121 37.939 456 235 13 50 492 57 477 4.55e-93 292
Msa0609980 MtrunA17_Chr5g0412251 38.051 431 218 9 97 491 86 503 1.25e-90 286
Msa0609980 MtrunA17_Chr3g0123521 39.487 390 216 7 90 464 144 528 2.34e-89 284
Msa0609980 MtrunA17_Chr3g0132951 36.782 435 226 9 91 489 94 515 8.26e-88 279
Msa0609980 MtrunA17_Chr1g0204141 36.344 454 248 12 50 492 57 480 2.74e-84 270
Msa0609980 MtrunA17_Chr4g0043911 35.096 416 243 10 97 496 150 554 7.06e-82 265
Msa0609980 MtrunA17_Chr5g0424241 36.650 412 231 10 98 489 158 559 7.88e-79 257
Msa0609980 MtrunA17_Chr4g0075311 37.642 441 220 11 94 489 161 591 1.39e-78 257
Msa0609980 MtrunA17_Chr2g0284071 35.892 443 231 10 91 490 209 641 3.45e-78 257
Msa0609980 MtrunA17_Chr1g0160781 34.223 412 244 9 97 492 149 549 1.38e-76 250
Msa0609980 MtrunA17_Chr3g0077321 35.507 414 232 11 97 490 147 545 1.34e-74 246
Msa0609980 MtrunA17_Chr3g0087291 36.432 398 234 9 100 492 176 559 1.32e-71 238
Msa0609980 MtrunA17_Chr4g0010511 36.409 401 236 8 100 495 236 622 6.39e-71 237
Msa0609980 MtrunA17_Chr7g0240241 77.419 124 24 1 256 375 1 124 1.28e-60 195
Msa0609980 MtrunA17_Chr4g0003561 33.957 374 221 9 90 457 68 421 7.64e-59 201
Msa0609980 MtrunA17_Chr3g0127811 32.997 297 171 8 97 379 63 345 5.73e-42 156
Msa0609980 MtrunA17_Chr1g0146501 32.686 309 180 8 94 379 82 385 9.94e-42 158
Msa0609980 MtrunA17_Chr7g0220381 31.148 305 185 7 85 370 86 384 3.72e-39 151
Msa0609980 MtrunA17_Chr4g0002361 26.608 342 201 13 97 427 86 388 8.23e-24 103
Msa0609980 MtrunA17_Chr1g0172911 58.000 50 21 0 209 258 80 129 2.40e-12 64.3
Msa0609980 MtrunA17_Chr1g0172911 47.761 67 11 1 95 137 19 85 1.37e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609980 AT1G14020.1 72.079 505 135 2 1 505 1 499 0.0 759
Msa0609980 AT2G03280.1 69.099 466 132 4 24 488 26 480 0.0 687
Msa0609980 AT2G03280.2 65.314 493 132 5 24 488 26 507 0.0 672
Msa0609980 AT5G15740.1 58.030 467 194 2 23 488 33 498 0.0 581
Msa0609980 AT3G02250.1 58.491 477 190 4 15 488 27 498 0.0 576
Msa0609980 AT2G37980.1 46.453 437 227 5 73 507 202 633 1.76e-137 411
Msa0609980 AT3G54100.1 47.330 412 205 6 93 497 213 619 1.61e-133 401
Msa0609980 AT5G35570.1 47.407 405 206 5 96 498 250 649 2.85e-132 398
Msa0609980 AT1G22460.1 45.349 430 215 6 73 490 137 558 3.05e-129 387
Msa0609980 AT5G64600.1 46.778 419 200 8 87 489 103 514 2.71e-128 384
Msa0609980 AT5G01100.1 47.132 401 204 5 97 493 216 612 3.43e-128 387
Msa0609980 AT1G76270.1 44.584 397 204 7 100 494 109 491 2.01e-104 324
Msa0609980 AT4G38390.1 43.500 400 212 7 97 494 123 510 1.83e-102 318
Msa0609980 AT1G20550.1 42.157 408 220 7 100 505 112 505 8.16e-102 317
Msa0609980 AT4G16650.2 43.521 409 207 10 89 490 113 504 2.72e-95 300
Msa0609980 AT4G16650.1 43.521 409 207 10 89 490 113 504 2.72e-95 300
Msa0609980 AT1G04910.1 36.638 464 260 10 50 506 57 493 1.54e-91 289
Msa0609980 AT4G24530.1 37.674 430 219 9 97 490 101 517 1.29e-89 284
Msa0609980 AT3G26370.1 38.619 391 218 8 90 464 152 536 3.01e-89 284
Msa0609980 AT5G65470.1 35.581 430 226 9 99 490 87 503 1.89e-86 275
Msa0609980 AT1G11990.1 39.173 411 222 10 98 491 191 590 2.99e-82 267
Msa0609980 AT1G62330.1 34.862 436 232 8 98 489 222 649 4.63e-82 268
Msa0609980 AT1G38065.2 37.046 413 230 10 97 489 26 428 8.37e-82 262
Msa0609980 AT1G38065.1 37.046 413 230 10 97 489 36 438 8.61e-82 262
Msa0609980 AT1G38131.1 37.046 413 230 10 97 489 155 557 2.34e-80 262
Msa0609980 AT1G11990.2 36.161 448 221 10 98 491 176 612 2.13e-77 254
Msa0609980 AT5G63390.1 38.000 400 228 9 100 493 167 552 2.58e-76 250
Msa0609980 AT1G29200.4 37.931 435 219 11 97 490 70 494 2.64e-76 248
Msa0609980 AT1G29200.1 37.931 435 219 11 97 490 70 494 2.64e-76 248
Msa0609980 AT1G35510.1 35.012 417 240 10 92 490 154 557 3.13e-75 248
Msa0609980 AT1G29200.2 37.931 435 219 11 97 490 186 610 5.43e-75 248
Msa0609980 AT2G01480.1 36.314 369 213 7 97 449 154 516 9.13e-75 246
Msa0609980 AT1G14970.3 34.140 413 245 10 97 493 9 410 1.68e-74 241
Msa0609980 AT2G01480.2 36.695 357 207 6 97 437 154 507 2.28e-74 244
Msa0609980 AT1G14970.2 34.140 413 245 10 97 493 35 436 2.58e-74 242
Msa0609980 AT1G29200.3 37.762 429 216 11 103 490 2 420 3.88e-74 241
Msa0609980 AT1G14970.1 34.140 413 245 10 97 493 155 556 3.55e-73 242
Msa0609980 AT2G44500.1 37.626 396 227 10 100 489 180 561 8.73e-73 241
Msa0609980 AT3G07900.1 34.772 394 241 7 100 489 191 572 1.05e-68 231
Msa0609980 AT1G52630.1 32.708 373 224 10 90 458 70 419 4.21e-59 202
Msa0609980 AT3G03810.2 35.855 304 178 7 91 379 83 384 8.14e-50 181
Msa0609980 AT3G03810.1 35.855 304 178 7 91 379 83 384 8.14e-50 181
Msa0609980 AT1G52630.2 31.054 351 218 9 112 458 1 331 9.27e-50 174
Msa0609980 AT3G26370.2 39.171 217 119 5 90 296 152 365 1.16e-45 164
Msa0609980 AT3G30300.2 33.333 306 180 7 91 379 97 395 3.42e-43 163
Msa0609980 AT3G30300.1 33.333 306 180 7 91 379 97 395 3.42e-43 163
Msa0609980 AT2G44500.2 39.914 233 127 7 100 326 180 405 4.80e-39 147
Msa0609980 AT1G51630.1 24.845 322 192 9 96 406 90 372 7.27e-19 89.4

Find 241 sgRNAs with CRISPR-Local

Find 443 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCATGGTCCCCTTTAA+AGG 0.174900 4_2:+57581812 Msa0609980:three_prime_UTR
TTATACAACTATACTGAATT+TGG 0.182459 4_2:-57581592 Msa0609990:three_prime_UTR
CCATCTGTGATGAATGATTT+TGG 0.203102 4_2:-57580860 None:intergenic
AAAGTTCTGCTGCAACTTTC+TGG 0.203760 4_2:+57582942 Msa0609980:three_prime_UTR
TGCATTCAATCAACCTTTAA+AGG 0.222604 4_2:-57581825 Msa0609990:three_prime_UTR
ATTGCAGCCGGTGAGATTTA+TGG 0.227102 4_2:+57580487 Msa0609980:CDS
TGGCATTCCAATTTCTTTAC+TGG 0.232585 4_2:+57577647 Msa0609980:CDS
TTGCAGATTTGTGTTAATTT+TGG 0.236857 4_2:+57577400 Msa0609980:five_prime_UTR
GGGTACCGATGCTTTCTTAT+TGG 0.244903 4_2:-57582560 Msa0609990:CDS
TCAGATATGCATTCCCTTCA+TGG 0.261168 4_2:+57580347 Msa0609980:intron
GATGGCTGCTTTGGATTTCA+TGG 0.269401 4_2:+57580878 Msa0609980:CDS
AGATTGCTCTTGCATACTTA+TGG 0.269547 4_2:-57581403 Msa0609990:three_prime_UTR
AGTAAATCCAGTAAAGAAAT+TGG 0.278555 4_2:-57577654 None:intergenic
TACATCTTTGCAAGCCTATA+TGG 0.293352 4_2:-57581539 Msa0609990:three_prime_UTR
CACCCCTCAAATTGAGAATC+TGG 0.293410 4_2:+57579950 Msa0609980:CDS
TGCTTTGGATTTCATGGTTT+CGG 0.294885 4_2:+57580884 Msa0609980:CDS
CAAAATACTTCTAATCTTGC+AGG 0.301113 4_2:-57581956 Msa0609990:exon
ACCAGCAAGGGCGGATTTGC+AGG 0.304466 4_2:+57582447 Msa0609980:three_prime_UTR
TTCATCACAGATGGCTGCTT+TGG 0.305983 4_2:+57580869 Msa0609980:CDS
TTCTAAGAGTGTCCTGCAAT+GGG 0.310538 4_2:+57578953 Msa0609980:CDS
TTGCTTGATATGCATCAAAA+TGG 0.313563 4_2:+57581139 Msa0609980:CDS
CTTTCTGGCTCTGATACATT+TGG 0.328912 4_2:+57582957 Msa0609980:three_prime_UTR
CTAAGTTTCTGTAGATCAAT+TGG 0.331955 4_2:-57579897 None:intergenic
TACATTGCAAAGTGACTCTA+TGG 0.337294 4_2:-57577343 None:intergenic
AAGGATTTCTTATCAAGTTC+CGG 0.337356 4_2:-57579136 None:intergenic
GCTTTCTCAGGTTGTACTCT+TGG 0.343079 4_2:+57580050 Msa0609980:CDS
GCAGAGTTGGCTCTGGACTA+TGG 0.343115 4_2:-57582775 Msa0609990:CDS
ATGCAAGAGCAATCTGAAAA+TGG 0.345318 4_2:+57581411 Msa0609980:three_prime_UTR
TGACAGAAAGAGGGCTCCTT+AGG 0.349061 4_2:+57583183 Msa0609980:three_prime_UTR
AACTTGATAAGAAATCCTTT+TGG 0.353716 4_2:+57579140 Msa0609980:CDS
TCAAATGCGTTCACCGTAGA+AGG 0.359804 4_2:+57581848 Msa0609980:three_prime_UTR
GCCTGCAAATCCGCCCTTGC+TGG 0.360260 4_2:-57582448 Msa0609990:CDS
TAGAAATAATCCTCCTCCTT+TGG 0.360561 4_2:-57581256 Msa0609990:three_prime_UTR
TAGCTCTCATGCAGGTATTC+CGG 0.361952 4_2:+57581073 Msa0609980:intron
AACAACAGTATGTCATTAAC+TGG 0.364991 4_2:+57581922 Msa0609980:three_prime_UTR
CATTGTGCTGTGGACATGTT+TGG 0.367522 4_2:+57577598 Msa0609980:CDS
CACTGTTCAGAGACTCCATC+TGG 0.373117 4_2:-57582534 Msa0609990:CDS
GCATTCAATCAACCTTTAAA+GGG 0.374835 4_2:-57581824 Msa0609990:three_prime_UTR
GAGGGCTCCTTAGGGCAAAT+AGG 0.381120 4_2:+57583192 Msa0609980:three_prime_UTR
TTCTGTCAAGGCAGGAGAAC+AGG 0.384455 4_2:-57583168 Msa0609990:intron
ACCTTTATTCCTACCTATGA+TGG 0.388352 4_2:+57580918 Msa0609980:CDS
GATCTTCGAGCAGAAAGAAT+TGG 0.388839 4_2:-57582066 Msa0609990:CDS
AGCTAACAGGAGGCATCTCC+AGG 0.388940 4_2:-57579371 None:intergenic
ATGGACATGCTGGCTTTCTC+AGG 0.395187 4_2:+57580038 Msa0609980:CDS
TGCCCCAGATTCTCAATTTG+AGG 0.396144 4_2:-57579954 None:intergenic
GAACCTCACATTGGTTGTTC+CGG 0.404001 4_2:+57579117 Msa0609980:CDS
CCATCTTATTGGACCGGAAA+AGG 0.405140 4_2:+57581107 Msa0609980:CDS
ACAAGCTGCAGGCATGTAAT+GGG 0.405918 4_2:+57581761 Msa0609980:three_prime_UTR
CTCAAGGATCTTGGACTTTG+CGG 0.406199 4_2:-57582008 Msa0609990:CDS
GAAAGGAGGCTCAAGGATCT+TGG 0.407166 4_2:-57582017 Msa0609990:CDS
TATGCATATCGATCTGCATT+TGG 0.408825 4_2:+57582742 Msa0609980:three_prime_UTR
TACAAGCTGCAGGCATGTAA+TGG 0.411895 4_2:+57581760 Msa0609980:three_prime_UTR
GCTCTTGCATACTTATGGTT+GGG 0.417087 4_2:-57581398 Msa0609990:three_prime_UTR
AGTGCTACTAATCTCAGATA+TGG 0.428804 4_2:+57582586 Msa0609980:three_prime_UTR
GCCTTGGTTATGCAAGCCTT+AGG 0.432969 4_2:+57580439 Msa0609980:CDS
TGCTCTTGCATACTTATGGT+TGG 0.435295 4_2:-57581399 Msa0609990:three_prime_UTR
CCCATCATAGGTAGGAATAA+AGG 0.436770 4_2:-57580919 None:intergenic
GCAGGAAATTATACTAGTAA+TGG 0.439060 4_2:+57578928 Msa0609980:intron
TTTCCTTGATATGGAAGAGC+TGG 0.441012 4_2:+57583000 Msa0609980:three_prime_UTR
GAAATATATATGTTCCATAT+AGG 0.441718 4_2:+57581525 Msa0609980:three_prime_UTR
TTTCTAAGAGTGTCCTGCAA+TGG 0.444915 4_2:+57578952 Msa0609980:CDS
ATACCTACGGTCTGCCCAAA+AGG 0.445579 4_2:-57579155 None:intergenic
AGGAAATAGTGTCTGAAGAA+AGG 0.445827 4_2:+57580377 Msa0609980:CDS
GATTTCATGGTTTCGGTAGC+CGG 0.450519 4_2:+57580891 Msa0609980:CDS
GGAACTGCTGTAACTCATCA+AGG 0.452325 4_2:-57580839 None:intergenic
TGAAAAGTGTGTGAAGGTTA+TGG 0.457566 4_2:+57577426 Msa0609980:five_prime_UTR
AAAAGTCCATCTTATTGGAC+CGG 0.458534 4_2:+57581101 Msa0609980:CDS
ATAGTTTATTACCTGTTCAA+TGG 0.458942 4_2:+57582414 Msa0609980:intron
TGAAGTGTGTGACAAAGAAA+TGG 0.461488 4_2:+57577463 Msa0609980:exon
GAAGTGCACCACCTTGTGTT+TGG 0.463947 4_2:-57579838 None:intergenic
AAGCTGCTCCTTTGATTCCA+AGG 0.468221 4_2:+57577537 Msa0609980:CDS
CTTACTTGAGTAGAGTTATG+AGG 0.468781 4_2:-57581334 Msa0609990:three_prime_UTR
TTGGGAGACCATTATTTGCT+AGG 0.469220 4_2:-57579878 None:intergenic
GCCCCAGATTCTCAATTTGA+GGG 0.469715 4_2:-57579953 None:intergenic
TTATTCTGGCAGTGGCTTCG+AGG 0.470272 4_2:+57579248 Msa0609980:intron
GAATAAACCAAACACGAAAA+CGG 0.470528 4_2:-57577562 None:intergenic
CTAACTTGCAGGAAGTAGAA+TGG 0.473374 4_2:-57577741 None:intergenic
TAAGTTTCTGTAGATCAATT+GGG 0.475386 4_2:-57579896 None:intergenic
TGGAGATGCCTCCTGTTAGC+TGG 0.475776 4_2:+57579373 Msa0609980:CDS
TTGTGACTGTGAGTGAACTA+TGG 0.476628 4_2:+57577627 Msa0609980:CDS
AGATATGGAAGCATCCCTTC+TGG 0.477120 4_2:+57582601 Msa0609980:three_prime_UTR
CTCCTCATTATCACGGCTCA+TGG 0.477204 4_2:+57582495 Msa0609980:three_prime_UTR
AAGCAATGCAGAGTTGGCTC+TGG 0.478444 4_2:-57582782 Msa0609990:CDS
TAACTTGCAGGAAGTAGAAT+GGG 0.479064 4_2:-57577740 None:intergenic
CAAACACGAAAACGGCTCCT+TGG 0.481546 4_2:-57577554 None:intergenic
CTCCATCTGGGGTCATCTTG+AGG 0.481584 4_2:-57582521 Msa0609990:CDS
ACCCCTCAAATTGAGAATCT+GGG 0.484445 4_2:+57579951 Msa0609980:CDS
AAGAGGCAAATCTAGATTCA+AGG 0.484970 4_2:-57582148 Msa0609990:CDS
GAGGGGTGAATTTAAGTGCC+TGG 0.487600 4_2:-57579935 None:intergenic
GTCAAATGAAAAGTATTACT+TGG 0.489028 4_2:+57579395 Msa0609980:CDS
CTCAGATGCAATGCCACAAA+AGG 0.490594 4_2:-57580008 None:intergenic
AGAATTGGAACTAGATCAGT+TGG 0.494087 4_2:-57582051 Msa0609990:CDS
TGAAAATGGCTCCTTCCCTC+TGG 0.497819 4_2:+57581425 Msa0609980:three_prime_UTR
ACAACTATACTGAATTTGGT+GGG 0.497845 4_2:-57581588 Msa0609990:three_prime_UTR
GGGATTACCTATTTGCCCTA+AGG 0.498091 4_2:-57583199 Msa0609990:CDS
AAACAAAAGCAATGCAGAGT+TGG 0.498255 4_2:-57582788 Msa0609990:CDS
ATTTCCTTCTCTCTCCATGA+AGG 0.500444 4_2:-57580361 None:intergenic
GATGCACGCCTAGCAAATAA+TGG 0.504541 4_2:+57579870 Msa0609980:CDS
ATAACCAAGGCAGTCTCCTC+CGG 0.505709 4_2:-57580427 None:intergenic
CAATTGATCTACAGAAACTT+AGG 0.505738 4_2:+57579898 Msa0609980:CDS
GTCTGAAGAAAGGAGATCAC+AGG 0.505868 4_2:+57580387 Msa0609980:CDS
ACAGGTTCACGAAAAGAGAA+TGG 0.506682 4_2:+57581198 Msa0609980:CDS
CATGCCTGCAGCTTGTAAAG+TGG 0.508006 4_2:-57581754 Msa0609990:three_prime_UTR
CCGAGGATCTCAAGCGGATG+AGG 0.509548 4_2:+57580090 Msa0609980:CDS
TAGCCAGCTCTTCCATATCA+AGG 0.509727 4_2:-57583003 Msa0609990:intron
AGCCCTCTTTCTGTCAAGGC+AGG 0.511277 4_2:-57583176 Msa0609990:CDS
GACAGAAAGAGGGCTCCTTA+GGG 0.511598 4_2:+57583184 Msa0609980:three_prime_UTR
TATGCATACACCTTGACACT+GGG 0.512341 4_2:-57582727 Msa0609990:CDS
TACAACTATACTGAATTTGG+TGG 0.513828 4_2:-57581589 Msa0609990:three_prime_UTR
TTGCGCCTCAAAATACAGCT+TGG 0.514584 4_2:+57582914 Msa0609980:three_prime_UTR
TCTCCTGCCTTGACAGAAAG+AGG 0.515382 4_2:+57583173 Msa0609980:three_prime_UTR
GCAGTCTCCTCCGGTGTCAA+AGG 0.517244 4_2:-57580418 None:intergenic
AGATCTCATCAATTTGCTGC+AGG 0.518502 4_2:+57582084 Msa0609980:three_prime_UTR
TGGGTTGTAATAATTGTGGC+CGG 0.524912 4_2:+57581780 Msa0609980:three_prime_UTR
CACATTCATAACTGTGCAGT+TGG 0.525016 4_2:-57582846 Msa0609990:intron
GACACCGGAGGAGACTGCCT+TGG 0.525025 4_2:+57580423 Msa0609980:CDS
GCATCTACAAACTCATTCCA+TGG 0.525256 4_2:-57581169 Msa0609990:three_prime_UTR
GGAAGCATCCCTTCTGGAAG+AGG 0.525978 4_2:+57582607 Msa0609980:three_prime_UTR
GCCCATGAGCCGTGATAATG+AGG 0.527832 4_2:-57582497 Msa0609990:CDS
ATCTGAGATTAGTAGCACTA+GGG 0.531413 4_2:-57582582 Msa0609990:CDS
CTAAGAGTGTCCTGCAATGG+GGG 0.532495 4_2:+57578955 Msa0609980:CDS
CCTCATCCGCTTGAGATCCT+CGG 0.534275 4_2:-57580090 None:intergenic
GTTTGTAGATGCTGTGCGAC+AGG 0.534296 4_2:+57581180 Msa0609980:CDS
CTTGGACTTTGCGGTGAAAG+TGG 0.534968 4_2:-57581999 Msa0609990:CDS
CCTTTATTCCTACCTATGAT+GGG 0.535492 4_2:+57580919 Msa0609980:CDS
AGTTGGAATATTATCAAGAA+AGG 0.536592 4_2:-57582034 Msa0609990:CDS
ATCGCAAATGTAGCCTTCTA+CGG 0.536666 4_2:-57581861 Msa0609990:three_prime_UTR
TGAAAAGTATTACTTGGAGC+AGG 0.539964 4_2:+57579401 Msa0609980:CDS
CCAAAATCATTCATCACAGA+TGG 0.542359 4_2:+57580860 Msa0609980:CDS
TCCTCATTATCACGGCTCAT+GGG 0.543503 4_2:+57582496 Msa0609980:three_prime_UTR
TGTCTCCCGGTCAAAACCTA+AGG 0.543702 4_2:-57580455 None:intergenic
AACTATACTGAATTTGGTGG+GGG 0.544382 4_2:-57581586 Msa0609990:three_prime_UTR
TATGAAGTCAAAGGACCAGC+TGG 0.544591 4_2:-57583233 Msa0609990:CDS
CTACAAACTCATTCCATGGA+AGG 0.551044 4_2:-57581165 Msa0609990:three_prime_UTR
GCAGGATCGCAAGCTGAAAG+AGG 0.551716 4_2:-57582165 Msa0609990:intron
CACCTCAAGATGACCCCAGA+TGG 0.552036 4_2:+57582519 Msa0609980:three_prime_UTR
AAACGGCTCCTTGGAATCAA+AGG 0.552528 4_2:-57577545 None:intergenic
TCCCAAGAGAAAAGACCAGC+TGG 0.553440 4_2:+57583218 Msa0609980:three_prime_UTR
CCCCAGATTCTCAATTTGAG+GGG 0.555415 4_2:-57579952 None:intergenic
GAGATATGAGATGGACATGC+TGG 0.557518 4_2:+57580028 Msa0609980:CDS
CTCTAAGAACTTATGCCAGA+GGG 0.558155 4_2:-57581440 Msa0609990:three_prime_UTR
ACTGTTCAGAGACTCCATCT+GGG 0.560536 4_2:-57582533 Msa0609990:CDS
CAGGTTCACGAAAAGAGAAT+GGG 0.560835 4_2:+57581199 Msa0609980:CDS
ATCAAAATGGAACCCTTCCA+TGG 0.561331 4_2:+57581152 Msa0609980:CDS
CAATGTAAATCTGTGTCTCC+CGG 0.564211 4_2:-57580468 None:intergenic
TTTCCTTCTCTCTCCATGAA+GGG 0.565721 4_2:-57580360 None:intergenic
CCCTCATGAGTGCCTTTGTG+AGG 0.571802 4_2:+57581285 Msa0609980:CDS
TCTAAGAGTGTCCTGCAATG+GGG 0.572836 4_2:+57578954 Msa0609980:CDS
CAACTATACTGAATTTGGTG+GGG 0.573463 4_2:-57581587 Msa0609990:three_prime_UTR
ACACAGATTTACATTGCAGC+CGG 0.575721 4_2:+57580475 Msa0609980:CDS
CAATGTACTTCTTACGTACG+AGG 0.576923 4_2:+57577359 Msa0609980:five_prime_UTR
ACAATGATTCGACGATAAGT+CGG 0.577569 4_2:-57581226 Msa0609990:three_prime_UTR
TATAACCGCCCTCTTCCAGA+AGG 0.578293 4_2:-57582616 Msa0609990:CDS
GTGACATGGTGACAATTGCT+CGG 0.579350 4_2:+57579089 Msa0609980:CDS
TGGGAACATGGCAAAACTTG+TGG 0.580054 4_2:+57580938 Msa0609980:CDS
ATGATCATCTGTAGTCACTC+TGG 0.581191 4_2:+57583259 Msa0609980:three_prime_UTR
GATCATGCTTATGAAGTCAA+AGG 0.581508 4_2:-57583242 Msa0609990:CDS
AAGGAGCCCTCTTTCTGTCA+AGG 0.581673 4_2:-57583180 Msa0609990:CDS
TAGGTGCCGTGTTAATTACC+AGG 0.582283 4_2:+57579917 Msa0609980:CDS
GATTCAGATACTTCGCGAGA+GGG 0.583952 4_2:+57579983 Msa0609980:CDS
TATCTGAGATTAGTAGCACT+AGG 0.584493 4_2:-57582583 Msa0609990:CDS
GTTCATTCTCTATGTAATCA+CGG 0.584697 4_2:+57581660 Msa0609980:three_prime_UTR
ATATGCATACACCTTGACAC+TGG 0.586569 4_2:-57582728 Msa0609990:CDS
TGTAGACAAACCAAAGGAGG+AGG 0.587728 4_2:+57581246 Msa0609980:CDS
CTCGGATATCCCCAGTGTCA+AGG 0.587901 4_2:+57582717 Msa0609980:three_prime_UTR
CTCCTGCCTTGACAGAAAGA+GGG 0.588693 4_2:+57583174 Msa0609980:three_prime_UTR
GGGTCTATGTCCTTTGACAC+CGG 0.590187 4_2:+57580408 Msa0609980:CDS
TACAAACTCATTCCATGGAA+GGG 0.592326 4_2:-57581164 Msa0609990:three_prime_UTR
GGTAGGAATAAAGGTGTCAC+CGG 0.594798 4_2:-57580910 None:intergenic
ACAAAGGCACTCATGAGGGT+TGG 0.596296 4_2:-57581281 Msa0609990:three_prime_UTR
TTTGAATCAAATGCGTGCCG+CGG 0.597362 4_2:+57578978 Msa0609980:CDS
CCCTCACAAAGGCACTCATG+AGG 0.597403 4_2:-57581286 Msa0609990:three_prime_UTR
TAGCAGTCGGAATAAGAGAA+GGG 0.598131 4_2:-57582118 Msa0609990:CDS
CATTCAATCAACCTTTAAAG+GGG 0.599650 4_2:-57581823 Msa0609990:three_prime_UTR
GTAGACGTTGCTGAGACCAA+TGG 0.600772 4_2:-57582670 Msa0609990:CDS
TCAAGGCTTGCAATAGCAGT+CGG 0.600784 4_2:-57582131 Msa0609990:CDS
CACACTTTGTTCCCTCACAA+AGG 0.600880 4_2:-57581297 Msa0609990:three_prime_UTR
AACTTGTGGAAGGCCACCGC+AGG 0.602466 4_2:+57580952 Msa0609980:CDS
CCTCACAAAGGCACTCATGA+GGG 0.602588 4_2:-57581285 Msa0609990:three_prime_UTR
TGGAATATTATCAAGAAAGG+AGG 0.602703 4_2:-57582031 Msa0609990:CDS
GCCATGTTCCCATCATAGGT+AGG 0.602990 4_2:-57580927 None:intergenic
CCCCTCAAATTGAGAATCTG+GGG 0.605300 4_2:+57579952 Msa0609980:CDS
ACAACTCAACGGCCTCCTCA+AGG 0.607711 4_2:+57577692 Msa0609980:CDS
ATAGCAGTCGGAATAAGAGA+AGG 0.608578 4_2:-57582119 Msa0609990:CDS
AACATGGCAAAACTTGTGGA+AGG 0.609196 4_2:+57580942 Msa0609980:CDS
CCTCATGAGTGCCTTTGTGA+GGG 0.609759 4_2:+57581286 Msa0609980:CDS
TTATCAAGAAAGGAGGCTCA+AGG 0.609776 4_2:-57582024 Msa0609990:CDS
TCCTACCTATGATGGGAACA+TGG 0.610654 4_2:+57580926 Msa0609980:CDS
GGGTTGTAATAATTGTGGCC+GGG 0.612240 4_2:+57581781 Msa0609980:three_prime_UTR
ACAAAGTGTGATGATTTGCT+AGG 0.614058 4_2:+57581310 Msa0609980:CDS
AATGGAAGTTAGATCATCAG+AGG 0.614061 4_2:+57577481 Msa0609980:exon
GGCATTTCAGATTTGTGACA+TGG 0.614628 4_2:+57579075 Msa0609980:intron
CATTGTAGACAAACCAAAGG+AGG 0.615228 4_2:+57581243 Msa0609980:CDS
TTCACCACCATAAATCTCAC+CGG 0.615230 4_2:-57580494 None:intergenic
ACTGTTGTTTGTATCTCTTG+AGG 0.620279 4_2:-57581908 Msa0609990:three_prime_UTR
GGTGAAAGTGGTGATGTCCT+TGG 0.620946 4_2:-57581987 Msa0609990:CDS
TCATTTGACCAGCTAACAGG+AGG 0.621119 4_2:-57579381 None:intergenic
ACCTAAGGCTTGCATAACCA+AGG 0.627242 4_2:-57580440 None:intergenic
GGTTGTGTGATAACCAGCAA+GGG 0.628035 4_2:+57582435 Msa0609980:three_prime_UTR
TGGTTGTGTGATAACCAGCA+AGG 0.629031 4_2:+57582434 Msa0609980:three_prime_UTR
GTATATATCACACAACTCAA+CGG 0.629814 4_2:+57577681 Msa0609980:CDS
TCTCTAAGAACTTATGCCAG+AGG 0.629837 4_2:-57581441 Msa0609990:three_prime_UTR
AAGAACTTATGCCAGAGGGA+AGG 0.630908 4_2:-57581436 Msa0609990:three_prime_UTR
GAAAAGTGGATACTCGACCC+TGG 0.636896 4_2:+57579353 Msa0609980:CDS
AGCAGTCGGAATAAGAGAAG+GGG 0.636940 4_2:-57582117 Msa0609990:CDS
AATCATTGTAGACAAACCAA+AGG 0.637419 4_2:+57581240 Msa0609980:CDS
ATTCAGATACTTCGCGAGAG+GGG 0.637675 4_2:+57579984 Msa0609980:CDS
GAACTGCTGTAACTCATCAA+GGG 0.638982 4_2:-57580838 None:intergenic
GAAGCATCCCTTCTGGAAGA+GGG 0.639736 4_2:+57582608 Msa0609980:three_prime_UTR
ATACTAGCTCCTCATTATCA+CGG 0.640006 4_2:+57582488 Msa0609980:three_prime_UTR
TTTGTTCAACCATTGTGCTG+TGG 0.645471 4_2:+57577588 Msa0609980:CDS
TGGTTGTGAAAAGTGTGTGA+AGG 0.647524 4_2:+57577420 Msa0609980:five_prime_UTR
CTGTAGTCACTCTGGCACTG+TGG 0.648083 4_2:+57583267 Msa0609980:three_prime_UTR
TGATTCAGATACTTCGCGAG+AGG 0.649037 4_2:+57579982 Msa0609980:CDS
ATTCCCTTCATGGAGAGAGA+AGG 0.650807 4_2:+57580357 Msa0609980:CDS
TGAAGGTTATGGTGATGAAG+TGG 0.651256 4_2:+57577437 Msa0609980:five_prime_UTR
CTTGCAGGAAGTAGAATGGG+AGG 0.651294 4_2:-57577737 None:intergenic
GTAATGGGTTGTAATAATTG+TGG 0.651529 4_2:+57581776 Msa0609980:three_prime_UTR
ATAACCGCCCTCTTCCAGAA+GGG 0.651691 4_2:-57582615 Msa0609990:CDS
TGATTCCAATAAGAAAGCAT+CGG 0.654051 4_2:+57582555 Msa0609980:three_prime_UTR
TAAGTGCCTGGTAATTAACA+CGG 0.657828 4_2:-57579923 None:intergenic
ATGGAAGTTAGATCATCAGA+GGG 0.666260 4_2:+57577482 Msa0609980:CDS
TTGCACTAATGAAGAAGCCG+AGG 0.669813 4_2:+57580073 Msa0609980:CDS
TCTGAGATTAGTAGCACTAG+GGG 0.673869 4_2:-57582581 Msa0609990:CDS
CTGTTCAGAGACTCCATCTG+GGG 0.675062 4_2:-57582532 Msa0609990:CDS
AATATAACATCTCCTTGAGG+AGG 0.676147 4_2:-57577704 None:intergenic
CAAACATGTCCACAGCACAA+TGG 0.677892 4_2:-57577597 None:intergenic
TGTGTGATAACCAGCAAGGG+CGG 0.678647 4_2:+57582438 Msa0609980:three_prime_UTR
AAGAAGCCGAGGATCTCAAG+CGG 0.678663 4_2:+57580084 Msa0609980:CDS
TCTGAAGAAAGGAGATCACA+GGG 0.680384 4_2:+57580388 Msa0609980:CDS
GCTAACAGGAGGCATCTCCA+GGG 0.682429 4_2:-57579370 None:intergenic
ATTGCATCTGAGATATGAGA+TGG 0.683390 4_2:+57580019 Msa0609980:CDS
ACAAATATAACATCTCCTTG+AGG 0.683422 4_2:-57577707 None:intergenic
ATGCATACACCTTGACACTG+GGG 0.698561 4_2:-57582726 Msa0609990:CDS
TCTATGTCCTTTGACACCGG+AGG 0.698582 4_2:+57580411 Msa0609980:CDS
GTTCCGGAACAACCAATGTG+AGG 0.701296 4_2:-57579120 None:intergenic
GCATCCCTTCTGGAAGAGGG+CGG 0.703925 4_2:+57582611 Msa0609980:three_prime_UTR
GCAGCCGGTGAGATTTATGG+TGG 0.721413 4_2:+57580490 Msa0609980:CDS
GAGTAAATAGATACCTGCGG+TGG 0.724695 4_2:-57580965 None:intergenic
CTGAGATTAGTAGCACTAGG+GGG 0.740933 4_2:-57582580 Msa0609990:CDS
TGAGGAGCTAGTATGCAAAG+CGG 0.776917 4_2:-57582479 Msa0609990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAACTTTAAAAGTAATTA+TGG - chr4_2:57578003-57578022 None:intergenic 10.0%
!!! ATATTTTTTTTGGAAATTTA+GGG - chr4_2:57581044-57581063 None:intergenic 10.0%
!!! TATATTTTTTTTGGAAATTT+AGG - chr4_2:57581045-57581064 None:intergenic 10.0%
!! ATTTAGCAATAATAGTAATA+TGG + chr4_2:57577889-57577908 Msa0609980:intron 15.0%
!!! GGAAAAGAATTTATTTTTTT+TGG + chr4_2:57578175-57578194 Msa0609980:intron 15.0%
!!! TAAATGGATTTATTGATTTT+TGG - chr4_2:57578431-57578450 None:intergenic 15.0%
!!! AATTTTCCTTTAAATATGAT+AGG + chr4_2:57578582-57578601 Msa0609980:intron 15.0%
!!! AAAGTTGTTTTTTTTTATTC+TGG + chr4_2:57579234-57579253 Msa0609980:intron 15.0%
!! TGAAAAGATATACATAAAAA+AGG - chr4_2:57580142-57580161 None:intergenic 15.0%
!! AAGAAAAATAGAAAAGAAAA+AGG + chr4_2:57581503-57581522 Msa0609980:three_prime_UTR 15.0%
!! TTGCTAAATTAAATCATATG+TGG - chr4_2:57577878-57577897 None:intergenic 20.0%
!! ATGGATTTAATGTATATTCA+CGG + chr4_2:57577908-57577927 Msa0609980:intron 20.0%
!! TCTAATAAAAACACAATGTT+AGG - chr4_2:57578095-57578114 None:intergenic 20.0%
!!! AACATTGTGTTTTTATTAGA+TGG + chr4_2:57578095-57578114 Msa0609980:intron 20.0%
!!! AAATAAATTCTTTTCCCAAA+GGG - chr4_2:57578171-57578190 None:intergenic 20.0%
!!! AAAATAAATTCTTTTCCCAA+AGG - chr4_2:57578172-57578191 None:intergenic 20.0%
!!! CAACAATAGTTTAAAATAAG+TGG - chr4_2:57578507-57578526 None:intergenic 20.0%
!!! AAAGTACCTATCATATTTAA+AGG - chr4_2:57578591-57578610 None:intergenic 20.0%
!! ACATAAGTAAGTGTAATATT+GGG - chr4_2:57578741-57578760 None:intergenic 20.0%
!! AACATAAGTAAGTGTAATAT+TGG - chr4_2:57578742-57578761 None:intergenic 20.0%
!! ATATAATAGGAATAAAGAAG+TGG - chr4_2:57579025-57579044 None:intergenic 20.0%
!! ATTGAAGCTTATCATATAAT+AGG - chr4_2:57579038-57579057 None:intergenic 20.0%
!! TTATGTATAATACATCAATC+AGG + chr4_2:57579458-57579477 Msa0609980:intron 20.0%
!!! AAAAGTACAAGTTTATGATA+TGG + chr4_2:57579626-57579645 Msa0609980:intron 20.0%
!!! TAGTATTTTAGCAACTAAAA+TGG + chr4_2:57579657-57579676 Msa0609980:intron 20.0%
!! ATATGTACTACTGAAAATAA+GGG - chr4_2:57579772-57579791 None:intergenic 20.0%
!! TATATGTACTACTGAAAATA+AGG - chr4_2:57579773-57579792 None:intergenic 20.0%
!! TCAATACTATAAACAAAAAG+GGG - chr4_2:57580584-57580603 None:intergenic 20.0%
!! GTCAATACTATAAACAAAAA+GGG - chr4_2:57580585-57580604 None:intergenic 20.0%
!! TGTCAATACTATAAACAAAA+AGG - chr4_2:57580586-57580605 None:intergenic 20.0%
!!! TTTACTTTAGGTTAAAAAAG+AGG + chr4_2:57580806-57580825 Msa0609980:intron 20.0%
!!! TTTTAAAAAGTCCATCTTAT+TGG + chr4_2:57581096-57581115 Msa0609980:CDS 20.0%
!!! TTTTGTATACATGATTTTGT+AGG + chr4_2:57581465-57581484 Msa0609980:three_prime_UTR 20.0%
!! GAAATATATATGTTCCATAT+AGG + chr4_2:57581525-57581544 Msa0609980:three_prime_UTR 20.0%
!! TTATACAACTATACTGAATT+TGG - chr4_2:57581595-57581614 Msa0609990:three_prime_UTR 20.0%
!!! TGCTTTTGTTTAAATCATAT+TGG + chr4_2:57582800-57582819 Msa0609980:three_prime_UTR 20.0%
!! TTGCAGATTTGTGTTAATTT+TGG + chr4_2:57577400-57577419 Msa0609980:five_prime_UTR 25.0%
! AGTAAATCCAGTAAAGAAAT+TGG - chr4_2:57577657-57577676 None:intergenic 25.0%
!! CAAACATTTTTAATGATCTG+AGG - chr4_2:57577973-57577992 None:intergenic 25.0%
!!! TTTTCTGCTTGTTATATAGT+AGG + chr4_2:57578198-57578217 Msa0609980:intron 25.0%
! GATGGTCAATATCAATTAAT+TGG - chr4_2:57578287-57578306 None:intergenic 25.0%
!!! ATATTGACCATCATGTTTTT+TGG + chr4_2:57578295-57578314 Msa0609980:intron 25.0%
!!! TACTTGGCTGTTATTTTTTA+CGG - chr4_2:57578361-57578380 None:intergenic 25.0%
!!! GATTTTTGGTTAGAATCTAA+TGG - chr4_2:57578417-57578436 None:intergenic 25.0%
! CATAAGTAAGTGTAATATTG+GGG - chr4_2:57578740-57578759 None:intergenic 25.0%
!!! ATGCAAGATAGTTTTACATA+AGG + chr4_2:57578777-57578796 Msa0609980:intron 25.0%
!!! TGCAAGATAGTTTTACATAA+GGG + chr4_2:57578778-57578797 Msa0609980:intron 25.0%
! ACAAAATACTTATACGTAGA+TGG + chr4_2:57578815-57578834 Msa0609980:intron 25.0%
! CAAAATACTTATACGTAGAT+GGG + chr4_2:57578816-57578835 Msa0609980:intron 25.0%
! CAATGTTTAATTACCAGATT+TGG + chr4_2:57579054-57579073 Msa0609980:intron 25.0%
!! AACTTGATAAGAAATCCTTT+TGG + chr4_2:57579140-57579159 Msa0609980:CDS 25.0%
!! ACTTGATAAGAAATCCTTTT+GGG + chr4_2:57579141-57579160 Msa0609980:CDS 25.0%
! CATAACAAATGATATACCTA+CGG - chr4_2:57579171-57579190 None:intergenic 25.0%
!! CTTTTCCTAGTAAACTTTTT+GGG - chr4_2:57579339-57579358 None:intergenic 25.0%
!! ACTTTTCCTAGTAAACTTTT+TGG - chr4_2:57579340-57579359 None:intergenic 25.0%
! AAAAAGTTTACTAGGAAAAG+TGG + chr4_2:57579339-57579358 Msa0609980:CDS 25.0%
!!! GTCAAATGAAAAGTATTACT+TGG + chr4_2:57579395-57579414 Msa0609980:CDS 25.0%
! TTAAAGTTTGATACAGTGAT+TGG + chr4_2:57579500-57579519 Msa0609980:intron 25.0%
! TGGTTAATGATTCTTTGATA+TGG + chr4_2:57579520-57579539 Msa0609980:intron 25.0%
!! TTTAGAGTTATTAGCAGATA+TGG + chr4_2:57579560-57579579 Msa0609980:intron 25.0%
!!! AACAATGATAAAGTGCTTTT+TGG - chr4_2:57579712-57579731 None:intergenic 25.0%
! TAAGTTTCTGTAGATCAATT+GGG - chr4_2:57579899-57579918 None:intergenic 25.0%
!! TATATCTTTTCATGAGCAAT+AGG + chr4_2:57580150-57580169 Msa0609980:intron 25.0%
! GCAACACAAATTATAAAAGA+AGG - chr4_2:57580177-57580196 None:intergenic 25.0%
! ATTCCACTTTACTTTACTTT+AGG + chr4_2:57580794-57580813 Msa0609980:intron 25.0%
! TAACCTAAAGTAAAGTAAAG+TGG - chr4_2:57580800-57580819 None:intergenic 25.0%
!! TTAGGTTAAAAAAGAGGTAT+TGG + chr4_2:57580812-57580831 Msa0609980:intron 25.0%
! ATCTAATATAGAAGCTATTC+TGG + chr4_2:57581005-57581024 Msa0609980:intron 25.0%
!!! TAAGATGGACTTTTTAAAAC+CGG - chr4_2:57581095-57581114 Msa0609990:three_prime_UTR 25.0%
!!! AAGATTAGAAGTATTTTGCA+AGG + chr4_2:57581961-57581980 Msa0609980:three_prime_UTR 25.0%
! AGTTGGAATATTATCAAGAA+AGG - chr4_2:57582037-57582056 Msa0609990:CDS 25.0%
! GGTAATAAACTATACATTCA+GGG - chr4_2:57582407-57582426 Msa0609990:intron 25.0%
! AGGTAATAAACTATACATTC+AGG - chr4_2:57582408-57582427 Msa0609990:intron 25.0%
! ATAGTTTATTACCTGTTCAA+TGG + chr4_2:57582414-57582433 Msa0609980:intron 25.0%
! CATGAAAAGAAACATATGAA+GGG + chr4_2:57583131-57583150 Msa0609980:intron 25.0%
! ATGAAAAGAAACATATGAAG+GGG + chr4_2:57583132-57583151 Msa0609980:intron 25.0%
GAATAAACCAAACACGAAAA+CGG - chr4_2:57577565-57577584 None:intergenic 30.0%
GTATATATCACACAACTCAA+CGG + chr4_2:57577681-57577700 Msa0609980:CDS 30.0%
ACAAATATAACATCTCCTTG+AGG - chr4_2:57577710-57577729 None:intergenic 30.0%
! AGATAGAAAAACTAACTTGC+AGG - chr4_2:57577755-57577774 None:intergenic 30.0%
!! AATGTTTTTGTTTGCTTGAG+TGG + chr4_2:57577796-57577815 Msa0609980:intron 30.0%
! TATGTGTTGATAAACCCTTT+GGG + chr4_2:57578154-57578173 Msa0609980:intron 30.0%
AGACTTCACTCTAAACTAAA+TGG - chr4_2:57578447-57578466 None:intergenic 30.0%
!!! ATAAGTGGATCCACTTTTTT+GGG - chr4_2:57578492-57578511 None:intergenic 30.0%
!!! AATAAGTGGATCCACTTTTT+TGG - chr4_2:57578493-57578512 None:intergenic 30.0%
AAATTCTACTGAACAGCTAA+AGG - chr4_2:57578567-57578586 None:intergenic 30.0%
TATATACAAGGACTCATACA+GGG - chr4_2:57578658-57578677 None:intergenic 30.0%
TTATATACAAGGACTCATAC+AGG - chr4_2:57578659-57578678 None:intergenic 30.0%
TGATGGGGATATTATATACA+AGG - chr4_2:57578670-57578689 None:intergenic 30.0%
GCAGGAAATTATACTAGTAA+TGG + chr4_2:57578928-57578947 Msa0609980:intron 30.0%
TAATAGGAATAAAGAAGTGG+TGG - chr4_2:57579022-57579041 None:intergenic 30.0%
AAGGATTTCTTATCAAGTTC+CGG - chr4_2:57579139-57579158 None:intergenic 30.0%
!!! GTTTTTTTTTATTCTGGCAG+TGG + chr4_2:57579240-57579259 Msa0609980:intron 30.0%
GTACAAGTTTATGATATGGA+TGG + chr4_2:57579630-57579649 Msa0609980:intron 30.0%
TACTACTGAAAATAAGGGAA+GGG - chr4_2:57579767-57579786 None:intergenic 30.0%
CTAAGTTTCTGTAGATCAAT+TGG - chr4_2:57579900-57579919 None:intergenic 30.0%
CAATTGATCTACAGAAACTT+AGG + chr4_2:57579898-57579917 Msa0609980:CDS 30.0%
! TAAAAAAGGCATAGCAAAAC+AGG - chr4_2:57580128-57580147 None:intergenic 30.0%
!! GTTGCATGATTTGTTGAATT+TGG + chr4_2:57580192-57580211 Msa0609980:intron 30.0%
! AATGGTGAACTCACAATTTT+TGG - chr4_2:57580550-57580569 None:intergenic 30.0%
TACTATAAACAAAAAGGGGA+GGG - chr4_2:57580580-57580599 None:intergenic 30.0%
ATACTATAAACAAAAAGGGG+AGG - chr4_2:57580581-57580600 None:intergenic 30.0%
GGGAGGATACAAATTATAAA+TGG - chr4_2:57580670-57580689 None:intergenic 30.0%
TTAGGATGAAGAAATGCATA+AGG - chr4_2:57580749-57580768 None:intergenic 30.0%
TTGCTTGATATGCATCAAAA+TGG + chr4_2:57581139-57581158 Msa0609980:CDS 30.0%
AATCATTGTAGACAAACCAA+AGG + chr4_2:57581240-57581259 Msa0609980:CDS 30.0%
! ATGATTTTGTAGGAAACCAT+GGG + chr4_2:57581475-57581494 Msa0609980:three_prime_UTR 30.0%
!! CTATTTTTCTTTTTTCCCCA+TGG - chr4_2:57581494-57581513 Msa0609990:three_prime_UTR 30.0%
ACAACTATACTGAATTTGGT+GGG - chr4_2:57581591-57581610 Msa0609990:three_prime_UTR 30.0%
TACAACTATACTGAATTTGG+TGG - chr4_2:57581592-57581611 Msa0609990:three_prime_UTR 30.0%
GTTCATTCTCTATGTAATCA+CGG + chr4_2:57581660-57581679 Msa0609980:three_prime_UTR 30.0%
!! GTAATGGGTTGTAATAATTG+TGG + chr4_2:57581776-57581795 Msa0609980:three_prime_UTR 30.0%
! CATTCAATCAACCTTTAAAG+GGG - chr4_2:57581826-57581845 Msa0609990:three_prime_UTR 30.0%
GCATTCAATCAACCTTTAAA+GGG - chr4_2:57581827-57581846 Msa0609990:three_prime_UTR 30.0%
TGCATTCAATCAACCTTTAA+AGG - chr4_2:57581828-57581847 Msa0609990:three_prime_UTR 30.0%
AACAACAGTATGTCATTAAC+TGG + chr4_2:57581922-57581941 Msa0609980:three_prime_UTR 30.0%
CAAAATACTTCTAATCTTGC+AGG - chr4_2:57581959-57581978 Msa0609990:exon 30.0%
TGGAATATTATCAAGAAAGG+AGG - chr4_2:57582034-57582053 Msa0609990:CDS 30.0%
! TTGCATTTTACGTAGTACAT+GGG - chr4_2:57582256-57582275 Msa0609990:intron 30.0%
! ATTGCATTTTACGTAGTACA+TGG - chr4_2:57582257-57582276 Msa0609990:intron 30.0%
TATTCTCATTACCATCATGT+TGG + chr4_2:57582379-57582398 Msa0609980:intron 30.0%
! TGATTCCAATAAGAAAGCAT+CGG + chr4_2:57582555-57582574 Msa0609980:three_prime_UTR 30.0%
TCTACTTTGTCGTCAAAAAA+AGG + chr4_2:57582688-57582707 Msa0609980:three_prime_UTR 30.0%
CTACTTTGTCGTCAAAAAAA+GGG + chr4_2:57582689-57582708 Msa0609980:three_prime_UTR 30.0%
! TTTTCATGCTTCTCAATTCT+TGG - chr4_2:57582873-57582892 Msa0609990:intron 30.0%
! ATGCTTCTTTTTCCTTGATA+TGG + chr4_2:57582991-57583010 Msa0609980:three_prime_UTR 30.0%
GCATGAAAAGAAACATATGA+AGG + chr4_2:57583130-57583149 Msa0609980:intron 30.0%
TACATTGCAAAGTGACTCTA+TGG - chr4_2:57577346-57577365 None:intergenic 35.0%
! TGAAAAGTGTGTGAAGGTTA+TGG + chr4_2:57577426-57577445 Msa0609980:five_prime_UTR 35.0%
TGAAGTGTGTGACAAAGAAA+TGG + chr4_2:57577463-57577482 Msa0609980:exon 35.0%
AATGGAAGTTAGATCATCAG+AGG + chr4_2:57577481-57577500 Msa0609980:exon 35.0%
ATGGAAGTTAGATCATCAGA+GGG + chr4_2:57577482-57577501 Msa0609980:CDS 35.0%
TGGCATTCCAATTTCTTTAC+TGG + chr4_2:57577647-57577666 Msa0609980:CDS 35.0%
AATATAACATCTCCTTGAGG+AGG - chr4_2:57577707-57577726 None:intergenic 35.0%
! TAACTTGCAGGAAGTAGAAT+GGG - chr4_2:57577743-57577762 None:intergenic 35.0%
ATCATGCTTAGCTGAATGTT+GGG + chr4_2:57578123-57578142 Msa0609980:intron 35.0%
! GTATGTGTTGATAAACCCTT+TGG + chr4_2:57578153-57578172 Msa0609980:intron 35.0%
GTAGATTTGTGTGAAGAAAC+AGG + chr4_2:57578224-57578243 Msa0609980:intron 35.0%
ATTTGTGTGAAGAAACAGGT+AGG + chr4_2:57578228-57578247 Msa0609980:intron 35.0%
AGGAAGTCCAAAAAACATGA+TGG - chr4_2:57578305-57578324 None:intergenic 35.0%
CAAAGCAAATCATCTCTAAC+AGG - chr4_2:57578325-57578344 None:intergenic 35.0%
!! ATTTGCTTTGTTGCGTTTTG+TGG + chr4_2:57578335-57578354 Msa0609980:intron 35.0%
GGGGTACACTAAAAAGATTA+GGG - chr4_2:57578472-57578491 None:intergenic 35.0%
TGGGGTACACTAAAAAGATT+AGG - chr4_2:57578473-57578492 None:intergenic 35.0%
TTTAGTGTACCCCAAAAAAG+TGG + chr4_2:57578479-57578498 Msa0609980:intron 35.0%
!!! TAAGTGGATCCACTTTTTTG+GGG - chr4_2:57578491-57578510 None:intergenic 35.0%
ATTTGCTTTCTGTTAAGTGC+TGG - chr4_2:57578699-57578718 None:intergenic 35.0%
! TACTTATACGTAGATGGGTT+TGG + chr4_2:57578821-57578840 Msa0609980:intron 35.0%
! TAAAGAAGTGGTGGAAGAAT+AGG - chr4_2:57579013-57579032 None:intergenic 35.0%
! CAAATCTGAAATGCCAAATC+TGG - chr4_2:57579070-57579089 None:intergenic 35.0%
GAGTTCCCAAAAAGTTTACT+AGG + chr4_2:57579331-57579350 Msa0609980:CDS 35.0%
! TTTTCATTTGACCAGCTAAC+AGG - chr4_2:57579387-57579406 None:intergenic 35.0%
!! TGAAAAGTATTACTTGGAGC+AGG + chr4_2:57579401-57579420 Msa0609980:CDS 35.0%
!!! TGATATGGCTTTTAAGACAG+CGG + chr4_2:57579535-57579554 Msa0609980:intron 35.0%
ACTACTGAAAATAAGGGAAG+GGG - chr4_2:57579766-57579785 None:intergenic 35.0%
GTACTACTGAAAATAAGGGA+AGG - chr4_2:57579768-57579787 None:intergenic 35.0%
TAAGTGCCTGGTAATTAACA+CGG - chr4_2:57579926-57579945 None:intergenic 35.0%
! ATTGCATCTGAGATATGAGA+TGG + chr4_2:57580019-57580038 Msa0609980:CDS 35.0%
GTAATGATCTGACAAATGAG+AGG + chr4_2:57580287-57580306 Msa0609980:intron 35.0%
AGGAAATAGTGTCTGAAGAA+AGG + chr4_2:57580377-57580396 Msa0609980:CDS 35.0%
!! AATCCAAGTGCTGAAAAATG+GGG - chr4_2:57580690-57580709 None:intergenic 35.0%
!! CAATCCAAGTGCTGAAAAAT+GGG - chr4_2:57580691-57580710 None:intergenic 35.0%
!! TCAATCCAAGTGCTGAAAAA+TGG - chr4_2:57580692-57580711 None:intergenic 35.0%
GCATTTCTTCATCCTAATCA+TGG + chr4_2:57580752-57580771 Msa0609980:intron 35.0%
AACAAGCAGTAACCATGATT+AGG - chr4_2:57580767-57580786 None:intergenic 35.0%
! CCATCTGTGATGAATGATTT+TGG - chr4_2:57580863-57580882 None:intergenic 35.0%
CCAAAATCATTCATCACAGA+TGG + chr4_2:57580860-57580879 Msa0609980:CDS 35.0%
! TGCTTTGGATTTCATGGTTT+CGG + chr4_2:57580884-57580903 Msa0609980:CDS 35.0%
ACCTTTATTCCTACCTATGA+TGG + chr4_2:57580918-57580937 Msa0609980:CDS 35.0%
CCTTTATTCCTACCTATGAT+GGG + chr4_2:57580919-57580938 Msa0609980:CDS 35.0%
! TATCTTATTAGCTCTCATGC+AGG + chr4_2:57581065-57581084 Msa0609980:intron 35.0%
AAAAGTCCATCTTATTGGAC+CGG + chr4_2:57581101-57581120 Msa0609980:CDS 35.0%
TACAAACTCATTCCATGGAA+GGG - chr4_2:57581167-57581186 Msa0609990:three_prime_UTR 35.0%
ACAATGATTCGACGATAAGT+CGG - chr4_2:57581229-57581248 Msa0609990:three_prime_UTR 35.0%
TAGAAATAATCCTCCTCCTT+TGG - chr4_2:57581259-57581278 Msa0609990:three_prime_UTR 35.0%
!! ACAAAGTGTGATGATTTGCT+AGG + chr4_2:57581310-57581329 Msa0609980:CDS 35.0%
CTTACTTGAGTAGAGTTATG+AGG - chr4_2:57581337-57581356 Msa0609990:three_prime_UTR 35.0%
AGATTGCTCTTGCATACTTA+TGG - chr4_2:57581406-57581425 Msa0609990:three_prime_UTR 35.0%
ATGCAAGAGCAATCTGAAAA+TGG + chr4_2:57581411-57581430 Msa0609980:three_prime_UTR 35.0%
! CATGATTTTGTAGGAAACCA+TGG + chr4_2:57581474-57581493 Msa0609980:three_prime_UTR 35.0%
! TGATTTTGTAGGAAACCATG+GGG + chr4_2:57581476-57581495 Msa0609980:three_prime_UTR 35.0%
TACATCTTTGCAAGCCTATA+TGG - chr4_2:57581542-57581561 Msa0609990:three_prime_UTR 35.0%
TTTGGTGGGGGAAAAAATAA+GGG - chr4_2:57581577-57581596 Msa0609990:three_prime_UTR 35.0%
! ATTTGGTGGGGGAAAAAATA+AGG - chr4_2:57581578-57581597 Msa0609990:three_prime_UTR 35.0%
! AACTATACTGAATTTGGTGG+GGG - chr4_2:57581589-57581608 Msa0609990:three_prime_UTR 35.0%
! CAACTATACTGAATTTGGTG+GGG - chr4_2:57581590-57581609 Msa0609990:three_prime_UTR 35.0%
GGATGAAAAAACTGAACACT+TGG - chr4_2:57581890-57581909 Msa0609990:three_prime_UTR 35.0%
! ACTGTTGTTTGTATCTCTTG+AGG - chr4_2:57581911-57581930 Msa0609990:three_prime_UTR 35.0%
AGAATTGGAACTAGATCAGT+TGG - chr4_2:57582054-57582073 Msa0609990:CDS 35.0%
AAGAGGCAAATCTAGATTCA+AGG - chr4_2:57582151-57582170 Msa0609990:CDS 35.0%
GAACAAAGCATACAAATTGC+AGG - chr4_2:57582186-57582205 Msa0609990:intron 35.0%
GTACTACGTAAAATGCAATG+AGG + chr4_2:57582258-57582277 Msa0609980:intron 35.0%
TTATCACACAACCATTGAAC+AGG - chr4_2:57582428-57582447 Msa0609990:CDS 35.0%
ATACTAGCTCCTCATTATCA+CGG + chr4_2:57582488-57582507 Msa0609980:three_prime_UTR 35.0%
! ATCTGAGATTAGTAGCACTA+GGG - chr4_2:57582585-57582604 Msa0609990:CDS 35.0%
! TATCTGAGATTAGTAGCACT+AGG - chr4_2:57582586-57582605 Msa0609990:CDS 35.0%
! AGTGCTACTAATCTCAGATA+TGG + chr4_2:57582586-57582605 Msa0609980:three_prime_UTR 35.0%
TATGCATATCGATCTGCATT+TGG + chr4_2:57582742-57582761 Msa0609980:three_prime_UTR 35.0%
AAACAAAAGCAATGCAGAGT+TGG - chr4_2:57582791-57582810 Msa0609990:CDS 35.0%
!!! CAGTTGGTAACTTTTACTGT+AGG - chr4_2:57582833-57582852 Msa0609990:intron 35.0%
GATCATGCTTATGAAGTCAA+AGG - chr4_2:57583245-57583264 Msa0609990:CDS 35.0%
CAATGTACTTCTTACGTACG+AGG + chr4_2:57577359-57577378 Msa0609980:five_prime_UTR 40.0%
! TGGTTGTGAAAAGTGTGTGA+AGG + chr4_2:57577420-57577439 Msa0609980:five_prime_UTR 40.0%
! TGAAGGTTATGGTGATGAAG+TGG + chr4_2:57577437-57577456 Msa0609980:five_prime_UTR 40.0%
TTTGTTCAACCATTGTGCTG+TGG + chr4_2:57577588-57577607 Msa0609980:CDS 40.0%
TTGTGACTGTGAGTGAACTA+TGG + chr4_2:57577627-57577646 Msa0609980:CDS 40.0%
! CTAACTTGCAGGAAGTAGAA+TGG - chr4_2:57577744-57577763 None:intergenic 40.0%
!!! AGTGGTTTTGTGATGTGGTT+TGG + chr4_2:57577814-57577833 Msa0609980:intron 40.0%
GGTTTGGAAATGTGTAGCTT+TGG + chr4_2:57577830-57577849 Msa0609980:intron 40.0%
GATCATGCTTAGCTGAATGT+TGG + chr4_2:57578122-57578141 Msa0609980:intron 40.0%
TCATGCTTAGCTGAATGTTG+GGG + chr4_2:57578124-57578143 Msa0609980:intron 40.0%
!! ATAACAGCCAAGTACTGAGT+AGG + chr4_2:57578367-57578386 Msa0609980:intron 40.0%
!! TAACAGCCAAGTACTGAGTA+GGG + chr4_2:57578368-57578387 Msa0609980:intron 40.0%
ATCTATCCCTACTCAGTACT+TGG - chr4_2:57578377-57578396 None:intergenic 40.0%
CTCATACAGGGTCATTGAAA+TGG - chr4_2:57578646-57578665 None:intergenic 40.0%
!! TAAGTGCTGGAGAGATTGAT+GGG - chr4_2:57578686-57578705 None:intergenic 40.0%
!! TTAAGTGCTGGAGAGATTGA+TGG - chr4_2:57578687-57578706 None:intergenic 40.0%
!! TTTCTAAGAGTGTCCTGCAA+TGG + chr4_2:57578952-57578971 Msa0609980:CDS 40.0%
!! TTCTAAGAGTGTCCTGCAAT+GGG + chr4_2:57578953-57578972 Msa0609980:CDS 40.0%
! AGAATAGGAAGTACAAACCG+CGG - chr4_2:57578998-57579017 None:intergenic 40.0%
GGCATTTCAGATTTGTGACA+TGG + chr4_2:57579075-57579094 Msa0609980:intron 40.0%
TACGTAGCTTAACCCAAAGT+TGG + chr4_2:57579684-57579703 Msa0609980:intron 40.0%
!! TGCTTTTTGGCACCAACTTT+GGG - chr4_2:57579699-57579718 None:intergenic 40.0%
TACTGAAAATAAGGGAAGGG+GGG - chr4_2:57579764-57579783 None:intergenic 40.0%
CTACTGAAAATAAGGGAAGG+GGG - chr4_2:57579765-57579784 None:intergenic 40.0%
ACCTTGTGTTTGGCAAAAAG+CGG - chr4_2:57579831-57579850 None:intergenic 40.0%
TTGGGAGACCATTATTTGCT+AGG - chr4_2:57579881-57579900 None:intergenic 40.0%
ACCCCTCAAATTGAGAATCT+GGG + chr4_2:57579951-57579970 Msa0609980:CDS 40.0%
TCAGATATGCATTCCCTTCA+TGG + chr4_2:57580347-57580366 Msa0609980:intron 40.0%
TTTCCTTCTCTCTCCATGAA+GGG - chr4_2:57580363-57580382 None:intergenic 40.0%
ATTTCCTTCTCTCTCCATGA+AGG - chr4_2:57580364-57580383 None:intergenic 40.0%
TCTGAAGAAAGGAGATCACA+GGG + chr4_2:57580388-57580407 Msa0609980:CDS 40.0%
CAATGTAAATCTGTGTCTCC+CGG - chr4_2:57580471-57580490 None:intergenic 40.0%
ACACAGATTTACATTGCAGC+CGG + chr4_2:57580475-57580494 Msa0609980:CDS 40.0%
TTCACCACCATAAATCTCAC+CGG - chr4_2:57580497-57580516 None:intergenic 40.0%
AAAGGGGAGGGAGATATAAA+TGG - chr4_2:57580568-57580587 None:intergenic 40.0%
CACAAGCTAGAATCATTCAG+TGG - chr4_2:57580632-57580651 None:intergenic 40.0%
AGCACTTGGATTGAAAGTTG+TGG + chr4_2:57580698-57580717 Msa0609980:intron 40.0%
!! GAAAGTTGTGGCTCTGAAAA+TGG + chr4_2:57580710-57580729 Msa0609980:intron 40.0%
GAACTGCTGTAACTCATCAA+GGG - chr4_2:57580841-57580860 None:intergenic 40.0%
CCCATCATAGGTAGGAATAA+AGG - chr4_2:57580922-57580941 None:intergenic 40.0%
! TTTTGCCATGTTCCCATCAT+AGG - chr4_2:57580934-57580953 None:intergenic 40.0%
AACATGGCAAAACTTGTGGA+AGG + chr4_2:57580942-57580961 Msa0609980:CDS 40.0%
CGTGAGTAAATAGATACCTG+CGG - chr4_2:57580971-57580990 None:intergenic 40.0%
! GCAATTGTACAAGCCTTTTC+CGG - chr4_2:57581123-57581142 Msa0609990:three_prime_UTR 40.0%
ATCAAAATGGAACCCTTCCA+TGG + chr4_2:57581152-57581171 Msa0609980:CDS 40.0%
CTACAAACTCATTCCATGGA+AGG - chr4_2:57581168-57581187 Msa0609990:three_prime_UTR 40.0%
GCATCTACAAACTCATTCCA+TGG - chr4_2:57581172-57581191 Msa0609990:three_prime_UTR 40.0%
ACAGGTTCACGAAAAGAGAA+TGG + chr4_2:57581198-57581217 Msa0609980:CDS 40.0%
CAGGTTCACGAAAAGAGAAT+GGG + chr4_2:57581199-57581218 Msa0609980:CDS 40.0%
CATTGTAGACAAACCAAAGG+AGG + chr4_2:57581243-57581262 Msa0609980:CDS 40.0%
GCTCTTGCATACTTATGGTT+GGG - chr4_2:57581401-57581420 Msa0609990:three_prime_UTR 40.0%
TGCTCTTGCATACTTATGGT+TGG - chr4_2:57581402-57581421 Msa0609990:three_prime_UTR 40.0%
! CTCTAAGAACTTATGCCAGA+GGG - chr4_2:57581443-57581462 Msa0609990:three_prime_UTR 40.0%
! TCTCTAAGAACTTATGCCAG+AGG - chr4_2:57581444-57581463 Msa0609990:three_prime_UTR 40.0%
! TTTTCCACTTTACAAGCTGC+AGG + chr4_2:57581750-57581769 Msa0609980:three_prime_UTR 40.0%
TGGGTTGTAATAATTGTGGC+CGG + chr4_2:57581780-57581799 Msa0609980:three_prime_UTR 40.0%
! CCATGATCAAGTTTTTGACC+CGG - chr4_2:57581802-57581821 Msa0609990:three_prime_UTR 40.0%
TTGATCATGGTCCCCTTTAA+AGG + chr4_2:57581812-57581831 Msa0609980:three_prime_UTR 40.0%
ATCGCAAATGTAGCCTTCTA+CGG - chr4_2:57581864-57581883 Msa0609990:three_prime_UTR 40.0%
! AGTATTTTGCAAGGTCTCCA+AGG + chr4_2:57581970-57581989 Msa0609980:three_prime_UTR 40.0%
TTATCAAGAAAGGAGGCTCA+AGG - chr4_2:57582027-57582046 Msa0609990:CDS 40.0%
GATCTTCGAGCAGAAAGAAT+TGG - chr4_2:57582069-57582088 Msa0609990:CDS 40.0%
!! AGATCTCATCAATTTGCTGC+AGG + chr4_2:57582084-57582103 Msa0609980:three_prime_UTR 40.0%
TAGCAGTCGGAATAAGAGAA+GGG - chr4_2:57582121-57582140 Msa0609990:CDS 40.0%
ATAGCAGTCGGAATAAGAGA+AGG - chr4_2:57582122-57582141 Msa0609990:CDS 40.0%
! TCTGAGATTAGTAGCACTAG+GGG - chr4_2:57582584-57582603 Msa0609990:CDS 40.0%
TGCTGTCTGAGAAAAACCAT+TGG + chr4_2:57582654-57582673 Msa0609980:three_prime_UTR 40.0%
GTCAAAAAAAGGGTCTGACT+CGG + chr4_2:57582699-57582718 Msa0609980:three_prime_UTR 40.0%
TATGCATACACCTTGACACT+GGG - chr4_2:57582730-57582749 Msa0609990:CDS 40.0%
ATATGCATACACCTTGACAC+TGG - chr4_2:57582731-57582750 Msa0609990:CDS 40.0%
CACATTCATAACTGTGCAGT+TGG - chr4_2:57582849-57582868 Msa0609990:intron 40.0%
! GCAATCCAAGCTGTATTTTG+AGG - chr4_2:57582922-57582941 Msa0609990:intron 40.0%
AAAGTTCTGCTGCAACTTTC+TGG + chr4_2:57582942-57582961 Msa0609980:three_prime_UTR 40.0%
!! CTTTCTGGCTCTGATACATT+TGG + chr4_2:57582957-57582976 Msa0609980:three_prime_UTR 40.0%
TTTCCTTGATATGGAAGAGC+TGG + chr4_2:57583000-57583019 Msa0609980:three_prime_UTR 40.0%
ATATATCCATGTCCATCCGA+GGG - chr4_2:57583079-57583098 Msa0609990:intron 40.0%
AATATATCCATGTCCATCCG+AGG - chr4_2:57583080-57583099 Msa0609990:intron 40.0%
ATGATCATCTGTAGTCACTC+TGG + chr4_2:57583259-57583278 Msa0609980:three_prime_UTR 40.0%
AAGCTGCTCCTTTGATTCCA+AGG + chr4_2:57577537-57577556 Msa0609980:CDS 45.0%
AAACGGCTCCTTGGAATCAA+AGG - chr4_2:57577548-57577567 None:intergenic 45.0%
CAAACATGTCCACAGCACAA+TGG - chr4_2:57577600-57577619 None:intergenic 45.0%
CATTGTGCTGTGGACATGTT+TGG + chr4_2:57577598-57577617 Msa0609980:CDS 45.0%
!!! GCTTGAGTGGTTTTGTGATG+TGG + chr4_2:57577809-57577828 Msa0609980:intron 45.0%
GTACAGTGGAGAATCTGGAT+GGG - chr4_2:57578540-57578559 None:intergenic 45.0%
TGTACAGTGGAGAATCTGGA+TGG - chr4_2:57578541-57578560 None:intergenic 45.0%
GAGTTGTACAGTGGAGAATC+TGG - chr4_2:57578545-57578564 None:intergenic 45.0%
CAGCTAAAGGAGTTGTACAG+TGG - chr4_2:57578554-57578573 None:intergenic 45.0%
!! AAGTGCTGGAGAGATTGATG+GGG - chr4_2:57578685-57578704 None:intergenic 45.0%
! ACGTAGATGGGTTTGGTAGA+CGG + chr4_2:57578828-57578847 Msa0609980:intron 45.0%
CTGCAAGATTTCAGCTGACA+AGG - chr4_2:57578912-57578931 None:intergenic 45.0%
CTTGTCAGCTGAAATCTTGC+AGG + chr4_2:57578910-57578929 Msa0609980:intron 45.0%
!! TCTAAGAGTGTCCTGCAATG+GGG + chr4_2:57578954-57578973 Msa0609980:CDS 45.0%
TTGATTCAAACCCCCATTGC+AGG - chr4_2:57578968-57578987 None:intergenic 45.0%
TTTGAATCAAATGCGTGCCG+CGG + chr4_2:57578978-57578997 Msa0609980:CDS 45.0%
GTGACATGGTGACAATTGCT+CGG + chr4_2:57579089-57579108 Msa0609980:CDS 45.0%
! TCGGCTTTTGAACCTCACAT+TGG + chr4_2:57579108-57579127 Msa0609980:CDS 45.0%
! GAACCTCACATTGGTTGTTC+CGG + chr4_2:57579117-57579136 Msa0609980:CDS 45.0%
TCATTTGACCAGCTAACAGG+AGG - chr4_2:57579384-57579403 None:intergenic 45.0%
!! GTGCTTTTTGGCACCAACTT+TGG - chr4_2:57579700-57579719 None:intergenic 45.0%
TAAGGGAAGGGGGGAAATAT+AGG - chr4_2:57579755-57579774 None:intergenic 45.0%
!!! ACCGCTTTTTGCCAAACACA+AGG + chr4_2:57579827-57579846 Msa0609980:CDS 45.0%
! GCTTTTTGCCAAACACAAGG+TGG + chr4_2:57579830-57579849 Msa0609980:CDS 45.0%
GATGCACGCCTAGCAAATAA+TGG + chr4_2:57579870-57579889 Msa0609980:CDS 45.0%
! TAGGTGCCGTGTTAATTACC+AGG + chr4_2:57579917-57579936 Msa0609980:CDS 45.0%
CACCCCTCAAATTGAGAATC+TGG + chr4_2:57579950-57579969 Msa0609980:CDS 45.0%
CCCCAGATTCTCAATTTGAG+GGG - chr4_2:57579955-57579974 None:intergenic 45.0%
CCCCTCAAATTGAGAATCTG+GGG + chr4_2:57579952-57579971 Msa0609980:CDS 45.0%
GCCCCAGATTCTCAATTTGA+GGG - chr4_2:57579956-57579975 None:intergenic 45.0%
TGCCCCAGATTCTCAATTTG+AGG - chr4_2:57579957-57579976 None:intergenic 45.0%
TGATTCAGATACTTCGCGAG+AGG + chr4_2:57579982-57580001 Msa0609980:CDS 45.0%
GATTCAGATACTTCGCGAGA+GGG + chr4_2:57579983-57580002 Msa0609980:CDS 45.0%
ATTCAGATACTTCGCGAGAG+GGG + chr4_2:57579984-57580003 Msa0609980:CDS 45.0%
CTCAGATGCAATGCCACAAA+AGG - chr4_2:57580011-57580030 None:intergenic 45.0%
GAGATATGAGATGGACATGC+TGG + chr4_2:57580028-57580047 Msa0609980:CDS 45.0%
! GCTTTCTCAGGTTGTACTCT+TGG + chr4_2:57580050-57580069 Msa0609980:CDS 45.0%
TTGCACTAATGAAGAAGCCG+AGG + chr4_2:57580073-57580092 Msa0609980:CDS 45.0%
ATTCCCTTCATGGAGAGAGA+AGG + chr4_2:57580357-57580376 Msa0609980:CDS 45.0%
GTCTGAAGAAAGGAGATCAC+AGG + chr4_2:57580387-57580406 Msa0609980:CDS 45.0%
ACCTAAGGCTTGCATAACCA+AGG - chr4_2:57580443-57580462 None:intergenic 45.0%
!! TGCAAGCCTTAGGTTTTGAC+CGG + chr4_2:57580449-57580468 Msa0609980:CDS 45.0%
ATTGCAGCCGGTGAGATTTA+TGG + chr4_2:57580487-57580506 Msa0609980:CDS 45.0%
!! GTTGTGGCTCTGAAAATGGT+TGG + chr4_2:57580714-57580733 Msa0609980:intron 45.0%
GGAACTGCTGTAACTCATCA+AGG - chr4_2:57580842-57580861 None:intergenic 45.0%
TTCATCACAGATGGCTGCTT+TGG + chr4_2:57580869-57580888 Msa0609980:CDS 45.0%
! GATGGCTGCTTTGGATTTCA+TGG + chr4_2:57580878-57580897 Msa0609980:CDS 45.0%
GATTTCATGGTTTCGGTAGC+CGG + chr4_2:57580891-57580910 Msa0609980:CDS 45.0%
!! GGTAGGAATAAAGGTGTCAC+CGG - chr4_2:57580913-57580932 None:intergenic 45.0%
! TCCTACCTATGATGGGAACA+TGG + chr4_2:57580926-57580945 Msa0609980:CDS 45.0%
TGGGAACATGGCAAAACTTG+TGG + chr4_2:57580938-57580957 Msa0609980:CDS 45.0%
GAGTAAATAGATACCTGCGG+TGG - chr4_2:57580968-57580987 None:intergenic 45.0%
TAGCTCTCATGCAGGTATTC+CGG + chr4_2:57581073-57581092 Msa0609980:intron 45.0%
! CCTTTTCCGGTCCAATAAGA+TGG - chr4_2:57581110-57581129 Msa0609990:three_prime_UTR 45.0%
CCATCTTATTGGACCGGAAA+AGG + chr4_2:57581107-57581126 Msa0609980:CDS 45.0%
TGTAGACAAACCAAAGGAGG+AGG + chr4_2:57581246-57581265 Msa0609980:CDS 45.0%
CACACTTTGTTCCCTCACAA+AGG - chr4_2:57581300-57581319 Msa0609990:three_prime_UTR 45.0%
AAGAACTTATGCCAGAGGGA+AGG - chr4_2:57581439-57581458 Msa0609990:three_prime_UTR 45.0%
TACAAGCTGCAGGCATGTAA+TGG + chr4_2:57581760-57581779 Msa0609980:three_prime_UTR 45.0%
ACAAGCTGCAGGCATGTAAT+GGG + chr4_2:57581761-57581780 Msa0609980:three_prime_UTR 45.0%
GGGTTGTAATAATTGTGGCC+GGG + chr4_2:57581781-57581800 Msa0609980:three_prime_UTR 45.0%
CCGGGTCAAAAACTTGATCA+TGG + chr4_2:57581799-57581818 Msa0609980:three_prime_UTR 45.0%
TCAAATGCGTTCACCGTAGA+AGG + chr4_2:57581848-57581867 Msa0609980:three_prime_UTR 45.0%
CTCAAGGATCTTGGACTTTG+CGG - chr4_2:57582011-57582030 Msa0609990:CDS 45.0%
AGCAGTCGGAATAAGAGAAG+GGG - chr4_2:57582120-57582139 Msa0609990:CDS 45.0%
TCAAGGCTTGCAATAGCAGT+CGG - chr4_2:57582134-57582153 Msa0609990:CDS 45.0%
CATTCAGGGTTCCAACATGA+TGG - chr4_2:57582393-57582412 Msa0609990:intron 45.0%
TGGTTGTGTGATAACCAGCA+AGG + chr4_2:57582434-57582453 Msa0609980:three_prime_UTR 45.0%
GGTTGTGTGATAACCAGCAA+GGG + chr4_2:57582435-57582454 Msa0609980:three_prime_UTR 45.0%
TGAGGAGCTAGTATGCAAAG+CGG - chr4_2:57582482-57582501 Msa0609990:CDS 45.0%
TCCTCATTATCACGGCTCAT+GGG + chr4_2:57582496-57582515 Msa0609980:three_prime_UTR 45.0%
ACTGTTCAGAGACTCCATCT+GGG - chr4_2:57582536-57582555 Msa0609990:CDS 45.0%
!! GGGTACCGATGCTTTCTTAT+TGG - chr4_2:57582563-57582582 Msa0609990:CDS 45.0%
CTGAGATTAGTAGCACTAGG+GGG - chr4_2:57582583-57582602 Msa0609990:CDS 45.0%
!! AGATATGGAAGCATCCCTTC+TGG + chr4_2:57582601-57582620 Msa0609980:three_prime_UTR 45.0%
ATGCATACACCTTGACACTG+GGG - chr4_2:57582729-57582748 Msa0609990:CDS 45.0%
TTGCGCCTCAAAATACAGCT+TGG + chr4_2:57582914-57582933 Msa0609980:three_prime_UTR 45.0%
TAGCCAGCTCTTCCATATCA+AGG - chr4_2:57583006-57583025 Msa0609990:intron 45.0%
TATATCCATGTCCATCCGAG+GGG - chr4_2:57583078-57583097 Msa0609990:intron 45.0%
GGGATTACCTATTTGCCCTA+AGG - chr4_2:57583202-57583221 Msa0609990:CDS 45.0%
!!! ACCAGCTGGTCTTTTCTCTT+GGG - chr4_2:57583222-57583241 Msa0609990:CDS 45.0%
TATGAAGTCAAAGGACCAGC+TGG - chr4_2:57583236-57583255 Msa0609990:CDS 45.0%
!!! AATAAGATATATATTTTTTT+TGG - chr4_2:57581054-57581073 None:intergenic 5.0%
CAAACACGAAAACGGCTCCT+TGG - chr4_2:57577557-57577576 None:intergenic 50.0%
!! CAAGGAGCCGTTTTCGTGTT+TGG + chr4_2:57577555-57577574 Msa0609980:CDS 50.0%
CTTGCAGGAAGTAGAATGGG+AGG - chr4_2:57577740-57577759 None:intergenic 50.0%
! CGTAGATGGGTTTGGTAGAC+GGG + chr4_2:57578829-57578848 Msa0609980:intron 50.0%
! GTAGATGGGTTTGGTAGACG+GGG + chr4_2:57578830-57578849 Msa0609980:intron 50.0%
!! CTAAGAGTGTCCTGCAATGG+GGG + chr4_2:57578955-57578974 Msa0609980:CDS 50.0%
GTTCCGGAACAACCAATGTG+AGG - chr4_2:57579123-57579142 None:intergenic 50.0%
! AATCCTTTTGGGCAGACCGT+AGG + chr4_2:57579152-57579171 Msa0609980:CDS 50.0%
ATACCTACGGTCTGCCCAAA+AGG - chr4_2:57579158-57579177 None:intergenic 50.0%
TTATTCTGGCAGTGGCTTCG+AGG + chr4_2:57579248-57579267 Msa0609980:intron 50.0%
GAAAAGTGGATACTCGACCC+TGG + chr4_2:57579353-57579372 Msa0609980:CDS 50.0%
GAAGTGCACCACCTTGTGTT+TGG - chr4_2:57579841-57579860 None:intergenic 50.0%
GAGGGGTGAATTTAAGTGCC+TGG - chr4_2:57579938-57579957 None:intergenic 50.0%
!! ATGGACATGCTGGCTTTCTC+AGG + chr4_2:57580038-57580057 Msa0609980:CDS 50.0%
AAGAAGCCGAGGATCTCAAG+CGG + chr4_2:57580084-57580103 Msa0609980:CDS 50.0%
GGGTCTATGTCCTTTGACAC+CGG + chr4_2:57580408-57580427 Msa0609980:CDS 50.0%
TCTATGTCCTTTGACACCGG+AGG + chr4_2:57580411-57580430 Msa0609980:CDS 50.0%
ATAACCAAGGCAGTCTCCTC+CGG - chr4_2:57580430-57580449 None:intergenic 50.0%
GCCTTGGTTATGCAAGCCTT+AGG + chr4_2:57580439-57580458 Msa0609980:CDS 50.0%
!! GCAAGCCTTAGGTTTTGACC+GGG + chr4_2:57580450-57580469 Msa0609980:CDS 50.0%
TGTCTCCCGGTCAAAACCTA+AGG - chr4_2:57580458-57580477 None:intergenic 50.0%
!! CCAAGTGCTGAAAAATGGGG+AGG - chr4_2:57580687-57580706 None:intergenic 50.0%
!! CCTCCCCATTTTTCAGCACT+TGG + chr4_2:57580684-57580703 Msa0609980:intron 50.0%
GCCATGTTCCCATCATAGGT+AGG - chr4_2:57580930-57580949 None:intergenic 50.0%
GTTTGTAGATGCTGTGCGAC+AGG + chr4_2:57581180-57581199 Msa0609980:CDS 50.0%
!! ACAAAGGCACTCATGAGGGT+TGG - chr4_2:57581284-57581303 Msa0609990:three_prime_UTR 50.0%
!! CCTCACAAAGGCACTCATGA+GGG - chr4_2:57581288-57581307 Msa0609990:three_prime_UTR 50.0%
CCTCATGAGTGCCTTTGTGA+GGG + chr4_2:57581286-57581305 Msa0609980:CDS 50.0%
TGAAAATGGCTCCTTCCCTC+TGG + chr4_2:57581425-57581444 Msa0609980:three_prime_UTR 50.0%
CATGCCTGCAGCTTGTAAAG+TGG - chr4_2:57581757-57581776 Msa0609990:three_prime_UTR 50.0%
! GGTGAAAGTGGTGATGTCCT+TGG - chr4_2:57581990-57582009 Msa0609990:CDS 50.0%
CTTGGACTTTGCGGTGAAAG+TGG - chr4_2:57582002-57582021 Msa0609990:CDS 50.0%
GAAAGGAGGCTCAAGGATCT+TGG - chr4_2:57582020-57582039 Msa0609990:CDS 50.0%
TGTGTGATAACCAGCAAGGG+CGG + chr4_2:57582438-57582457 Msa0609980:three_prime_UTR 50.0%
CTCCTCATTATCACGGCTCA+TGG + chr4_2:57582495-57582514 Msa0609980:three_prime_UTR 50.0%
CTGTTCAGAGACTCCATCTG+GGG - chr4_2:57582535-57582554 Msa0609990:CDS 50.0%
CACTGTTCAGAGACTCCATC+TGG - chr4_2:57582537-57582556 Msa0609990:CDS 50.0%
! GAAGCATCCCTTCTGGAAGA+GGG + chr4_2:57582608-57582627 Msa0609980:three_prime_UTR 50.0%
ATAACCGCCCTCTTCCAGAA+GGG - chr4_2:57582618-57582637 Msa0609990:CDS 50.0%
TATAACCGCCCTCTTCCAGA+AGG - chr4_2:57582619-57582638 Msa0609990:CDS 50.0%
GTAGACGTTGCTGAGACCAA+TGG - chr4_2:57582673-57582692 Msa0609990:CDS 50.0%
! AAGCAATGCAGAGTTGGCTC+TGG - chr4_2:57582785-57582804 Msa0609990:CDS 50.0%
TCCTACCGTCAAAAACCCCT+CGG + chr4_2:57583060-57583079 Msa0609980:intron 50.0%
! TCCATCCGAGGGGTTTTTGA+CGG - chr4_2:57583068-57583087 Msa0609990:intron 50.0%
AAAAACCCCTCGGATGGACA+TGG + chr4_2:57583070-57583089 Msa0609980:intron 50.0%
TTCTGTCAAGGCAGGAGAAC+AGG - chr4_2:57583171-57583190 Msa0609990:CDS 50.0%
TCTCCTGCCTTGACAGAAAG+AGG + chr4_2:57583173-57583192 Msa0609980:three_prime_UTR 50.0%
CTCCTGCCTTGACAGAAAGA+GGG + chr4_2:57583174-57583193 Msa0609980:three_prime_UTR 50.0%
AAGGAGCCCTCTTTCTGTCA+AGG - chr4_2:57583183-57583202 Msa0609990:CDS 50.0%
TGACAGAAAGAGGGCTCCTT+AGG + chr4_2:57583183-57583202 Msa0609980:three_prime_UTR 50.0%
GACAGAAAGAGGGCTCCTTA+GGG + chr4_2:57583184-57583203 Msa0609980:three_prime_UTR 50.0%
TCCCAAGAGAAAAGACCAGC+TGG + chr4_2:57583218-57583237 Msa0609980:three_prime_UTR 50.0%
!!! GACCAGCTGGTCTTTTCTCT+TGG - chr4_2:57583223-57583242 Msa0609990:CDS 50.0%
ACAACTCAACGGCCTCCTCA+AGG + chr4_2:57577692-57577711 Msa0609980:CDS 55.0%
!! GCTAACAGGAGGCATCTCCA+GGG - chr4_2:57579373-57579392 None:intergenic 55.0%
!! AGCTAACAGGAGGCATCTCC+AGG - chr4_2:57579374-57579393 None:intergenic 55.0%
TGGAGATGCCTCCTGTTAGC+TGG + chr4_2:57579373-57579392 Msa0609980:CDS 55.0%
CCTCATCCGCTTGAGATCCT+CGG - chr4_2:57580093-57580112 None:intergenic 55.0%
GCAGCCGGTGAGATTTATGG+TGG + chr4_2:57580490-57580509 Msa0609980:CDS 55.0%
CCCTCATGAGTGCCTTTGTG+AGG + chr4_2:57581285-57581304 Msa0609980:CDS 55.0%
!! CCCTCACAAAGGCACTCATG+AGG - chr4_2:57581289-57581308 Msa0609990:three_prime_UTR 55.0%
GCAGGATCGCAAGCTGAAAG+AGG - chr4_2:57582168-57582187 Msa0609990:intron 55.0%
! GCCCATGAGCCGTGATAATG+AGG - chr4_2:57582500-57582519 Msa0609990:CDS 55.0%
CACCTCAAGATGACCCCAGA+TGG + chr4_2:57582519-57582538 Msa0609980:three_prime_UTR 55.0%
! CTCCATCTGGGGTCATCTTG+AGG - chr4_2:57582524-57582543 Msa0609990:CDS 55.0%
!! GGAAGCATCCCTTCTGGAAG+AGG + chr4_2:57582607-57582626 Msa0609980:three_prime_UTR 55.0%
CTCGGATATCCCCAGTGTCA+AGG + chr4_2:57582717-57582736 Msa0609980:three_prime_UTR 55.0%
!! GCAGAGTTGGCTCTGGACTA+TGG - chr4_2:57582778-57582797 Msa0609990:CDS 55.0%
! TCCGAGGGGTTTTTGACGGT+AGG - chr4_2:57583064-57583083 Msa0609990:intron 55.0%
ACCGTCAAAAACCCCTCGGA+TGG + chr4_2:57583064-57583083 Msa0609980:intron 55.0%
AGCCCTCTTTCTGTCAAGGC+AGG - chr4_2:57583179-57583198 Msa0609990:CDS 55.0%
GAGGGCTCCTTAGGGCAAAT+AGG + chr4_2:57583192-57583211 Msa0609980:three_prime_UTR 55.0%
CTGTAGTCACTCTGGCACTG+TGG + chr4_2:57583267-57583286 Msa0609980:three_prime_UTR 55.0%
! TCGCGAGAGGGGACCTTTTG+TGG + chr4_2:57579995-57580014 Msa0609980:CDS 60.0%
CCGAGGATCTCAAGCGGATG+AGG + chr4_2:57580090-57580109 Msa0609980:CDS 60.0%
! GCAGTCTCCTCCGGTGTCAA+AGG - chr4_2:57580421-57580440 None:intergenic 60.0%
AACTTGTGGAAGGCCACCGC+AGG + chr4_2:57580952-57580971 Msa0609980:CDS 60.0%
! ACCAGCAAGGGCGGATTTGC+AGG + chr4_2:57582447-57582466 Msa0609980:three_prime_UTR 60.0%
! GCATCCCTTCTGGAAGAGGG+CGG + chr4_2:57582611-57582630 Msa0609980:three_prime_UTR 60.0%
GACACCGGAGGAGACTGCCT+TGG + chr4_2:57580423-57580442 Msa0609980:CDS 65.0%
GCCTGCAAATCCGCCCTTGC+TGG - chr4_2:57582451-57582470 Msa0609990:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 57577341 57583295 57577341 ID=Msa0609980;Name=Msa0609980
chr4_2 mRNA 57577341 57583295 57577341 ID=Msa0609980-mRNA-1;Parent=Msa0609980;Name=Msa0609980-mRNA-1;_AED=0.12;_eAED=0.12;_QI=141|1|1|1|0.77|0.7|10|1563|507
chr4_2 exon 57577341 57577758 57577341 ID=Msa0609980-mRNA-1:exon:14947;Parent=Msa0609980-mRNA-1
chr4_2 exon 57578932 57578999 57578932 ID=Msa0609980-mRNA-1:exon:14948;Parent=Msa0609980-mRNA-1
chr4_2 exon 57579085 57579173 57579085 ID=Msa0609980-mRNA-1:exon:14949;Parent=Msa0609980-mRNA-1
chr4_2 exon 57579260 57579422 57579260 ID=Msa0609980-mRNA-1:exon:14950;Parent=Msa0609980-mRNA-1
chr4_2 exon 57579822 57580111 57579822 ID=Msa0609980-mRNA-1:exon:14951;Parent=Msa0609980-mRNA-1
chr4_2 exon 57580351 57580555 57580351 ID=Msa0609980-mRNA-1:exon:14952;Parent=Msa0609980-mRNA-1
chr4_2 exon 57580816 57580973 57580816 ID=Msa0609980-mRNA-1:exon:14953;Parent=Msa0609980-mRNA-1
chr4_2 exon 57581087 57582186 57581087 ID=Msa0609980-mRNA-1:exon:14954;Parent=Msa0609980-mRNA-1
chr4_2 exon 57582429 57583038 57582429 ID=Msa0609980-mRNA-1:exon:14955;Parent=Msa0609980-mRNA-1
chr4_2 exon 57583169 57583295 57583169 ID=Msa0609980-mRNA-1:exon:14956;Parent=Msa0609980-mRNA-1
chr4_2 five_prime_UTR 57577341 57577481 57577341 ID=Msa0609980-mRNA-1:five_prime_utr;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57577482 57577758 57577482 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57578932 57578999 57578932 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57579085 57579173 57579085 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57579260 57579422 57579260 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57579822 57580111 57579822 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57580351 57580555 57580351 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57580816 57580973 57580816 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 CDS 57581087 57581360 57581087 ID=Msa0609980-mRNA-1:cds;Parent=Msa0609980-mRNA-1
chr4_2 three_prime_UTR 57581361 57582186 57581361 ID=Msa0609980-mRNA-1:three_prime_utr;Parent=Msa0609980-mRNA-1
chr4_2 three_prime_UTR 57582429 57583038 57582429 ID=Msa0609980-mRNA-1:three_prime_utr;Parent=Msa0609980-mRNA-1
chr4_2 three_prime_UTR 57583169 57583295 57583169 ID=Msa0609980-mRNA-1:three_prime_utr;Parent=Msa0609980-mRNA-1
Gene Sequence

>Msa0609980

ATGGAAGTTAGATCATCAGAGGGTAATCAAGTGAGATATTATGATAAGCTTCTTCAAGCTGCTCCTTTGATTCCAAGGAGCCGTTTTCGTGTTTGGTTTATTCGAATTTGTTCAACCATTGTGCTGTGGACATGTTTGGTTCAGCTTGTGACTGTGAGTGAACTATGGCATTCCAATTTCTTTACTGGATTTACTAGTCGTATATATCACACAACTCAACGGCCTCCTCAAGGAGATGTTATATTTGTTCGATCTCCTCCCATTCTACTTCCTGCAAGAAATTATACTAGTAATGGTTTTCTAAGAGTGTCCTGCAATGGGGGTTTGAATCAAATGCGTGCCGCGATTTGTGACATGGTGACAATTGCTCGGCTTTTGAACCTCACATTGGTTGTTCCGGAACTTGATAAGAAATCCTTTTGGGCAGACCGTAGTGGCTTCGAGGATATATTTGATGTAAGACATTTCATTGATTCTTTACGAGATGAAGTTCGAATAGTGAAAAGAGTTCCCAAAAAGTTTACTAGGAAAAGTGGATACTCGACCCTGGAGATGCCTCCTGTTAGCTGGTCAAATGAAAAGTATTACTTGGAGCAGATTCTACCGCTTTTTGCCAAACACAAGGTGGTGCACTTCAACAAAACAGATGCACGCCTAGCAAATAATGGTCTCCCAATTGATCTACAGAAACTTAGGTGCCGTGTTAATTACCAGGCACTTAAATTCACCCCTCAAATTGAGAATCTGGGGCAAAAATTGATTCAGATACTTCGCGAGAGGGGACCTTTTGTGGCATTGCATCTGAGATATGAGATGGACATGCTGGCTTTCTCAGGTTGTACTCTTGGTTGCACTAATGAAGAAGCCGAGGATCTCAAGCGGATGAGATATGCATTCCCTTCATGGAGAGAGAAGGAAATAGTGTCTGAAGAAAGGAGATCACAGGGTCTATGTCCTTTGACACCGGAGGAGACTGCCTTGGTTATGCAAGCCTTAGGTTTTGACCGGGAGACACAGATTTACATTGCAGCCGGTGAGATTTATGGTGGTGAACGTAGACTTGCGCAACTGAGAGCTGCATTTCCAAAAATTGTTAAAAAAGAGGTATTGGTCGCCCTTGATGAGTTACAGCAGTTCCAAAATCATTCATCACAGATGGCTGCTTTGGATTTCATGGTTTCGGTAGCCGGTGACACCTTTATTCCTACCTATGATGGGAACATGGCAAAACTTGTGGAAGGCCACCGCAGGTATTCCGGTTTTAAAAAGTCCATCTTATTGGACCGGAAAAGGCTTGTACAATTGCTTGATATGCATCAAAATGGAACCCTTCCATGGAATGAGTTTGTAGATGCTGTGCGACAGGTTCACGAAAAGAGAATGGGTCAGCCGACTTATCGTCGAATCATTGTAGACAAACCAAAGGAGGAGGATTATTTCTACGCCAACCCTCATGAGTGCCTTTGTGAGGGAACAAAGTGTGATGATTTGCTAGGTCCTCATAACTCTACTCAAGTAAGATGA
Protein sequence

>Msa0609980

MEVRSSEGNQVRYYDKLLQAAPLIPRSRFRVWFIRICSTIVLWTCLVQLVTVSELWHSNFFTGFTSRIYHTTQRPPQGDVIFVRSPPILLPARNYTSNGFLRVSCNGGLNQMRAAICDMVTIARLLNLTLVVPELDKKSFWADRSGFEDIFDVRHFIDSLRDEVRIVKRVPKKFTRKSGYSTLEMPPVSWSNEKYYLEQILPLFAKHKVVHFNKTDARLANNGLPIDLQKLRCRVNYQALKFTPQIENLGQKLIQILRERGPFVALHLRYEMDMLAFSGCTLGCTNEEAEDLKRMRYAFPSWREKEIVSEERRSQGLCPLTPEETALVMQALGFDRETQIYIAAGEIYGGERRLAQLRAAFPKIVKKEVLVALDELQQFQNHSSQMAALDFMVSVAGDTFIPTYDGNMAKLVEGHRRYSGFKKSILLDRKRLVQLLDMHQNGTLPWNEFVDAVRQVHEKRMGQPTYRRIIVDKPKEEDYFYANPHECLCEGTKCDDLLGPHNSTQVR*