Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611570 | XP_003607993.2 | 78.974 | 195 | 8 | 3 | 1 | 167 | 8 | 197 | 1.22e-100 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611570 | sp|B6TZ45|CNR1_MAIZE | 48.062 | 129 | 39 | 2 | 52 | 152 | 41 | 169 | 3.58e-29 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0611570 | Msa0814160 | 0.800961 | 1.127441e-48 | -8.615850e-47 |
| Msa0611570 | Msa0861730 | 0.801495 | 8.766318e-49 | -8.615850e-47 |
| Msa0611570 | Msa1120680 | 0.838255 | 3.206205e-57 | -8.615850e-47 |
| Msa0611570 | Msa1156240 | 0.816561 | 5.190771e-52 | -8.615850e-47 |
| Msa0134570 | Msa0611570 | 0.800009 | 1.762086e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611570 | MtrunA17_Chr4g0045011 | 78.974 | 195 | 8 | 3 | 1 | 167 | 8 | 197 | 1.12e-104 | 298 |
| Msa0611570 | MtrunA17_Chr4g0045001 | 75.000 | 108 | 6 | 1 | 57 | 143 | 46 | 153 | 1.13e-51 | 162 |
| Msa0611570 | MtrunA17_Chr8g0391431 | 38.994 | 159 | 62 | 4 | 32 | 155 | 15 | 173 | 7.98e-27 | 100 |
| Msa0611570 | MtrunA17_Chr5g0402421 | 40.625 | 128 | 41 | 3 | 61 | 155 | 51 | 176 | 6.03e-23 | 90.1 |
| Msa0611570 | MtrunA17_Chr8g0391441 | 38.554 | 166 | 72 | 3 | 32 | 167 | 4 | 169 | 3.84e-21 | 84.7 |
| Msa0611570 | MtrunA17_Chr6g0484871 | 37.681 | 138 | 58 | 3 | 57 | 167 | 13 | 149 | 7.08e-21 | 83.6 |
| Msa0611570 | MtrunA17_Chr5g0395991 | 48.718 | 78 | 34 | 3 | 88 | 161 | 51 | 126 | 4.84e-16 | 70.5 |
| Msa0611570 | MtrunA17_Chr1g0187341 | 43.269 | 104 | 37 | 2 | 61 | 143 | 11 | 113 | 2.05e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611570 | AT1G14870.1 | 40.580 | 138 | 51 | 4 | 61 | 167 | 15 | 152 | 2.14e-27 | 100 |
| Msa0611570 | AT5G35525.1 | 42.029 | 138 | 49 | 4 | 61 | 167 | 15 | 152 | 2.00e-26 | 98.2 |
| Msa0611570 | AT3G18470.1 | 38.806 | 134 | 49 | 4 | 60 | 165 | 3 | 131 | 1.00e-22 | 88.2 |
| Msa0611570 | AT1G14870.2 | 41.748 | 103 | 39 | 1 | 62 | 143 | 16 | 118 | 1.07e-21 | 85.9 |
| Msa0611570 | AT1G49030.1 | 32.828 | 198 | 79 | 8 | 18 | 161 | 21 | 218 | 1.74e-21 | 87.4 |
| Msa0611570 | AT1G14880.1 | 35.507 | 138 | 58 | 4 | 61 | 167 | 14 | 151 | 4.95e-20 | 81.6 |
| Msa0611570 | AT3G18460.1 | 44.944 | 89 | 39 | 3 | 79 | 160 | 92 | 177 | 9.39e-20 | 82.0 |
| Msa0611570 | AT1G68630.1 | 38.168 | 131 | 51 | 4 | 62 | 164 | 29 | 157 | 2.06e-17 | 75.1 |
| Msa0611570 | AT1G68610.1 | 40.940 | 149 | 54 | 5 | 53 | 167 | 10 | 158 | 2.08e-16 | 72.4 |
| Msa0611570 | AT3G18450.1 | 38.202 | 89 | 47 | 2 | 79 | 160 | 90 | 177 | 1.48e-15 | 70.9 |
| Msa0611570 | AT2G40935.8 | 31.707 | 164 | 70 | 5 | 18 | 143 | 5 | 164 | 4.33e-15 | 69.7 |
| Msa0611570 | AT2G40935.9 | 31.707 | 164 | 70 | 5 | 18 | 143 | 5 | 164 | 4.33e-15 | 69.7 |
| Msa0611570 | AT2G40935.1 | 31.707 | 164 | 70 | 5 | 18 | 143 | 5 | 164 | 4.33e-15 | 69.7 |
| Msa0611570 | AT2G40935.6 | 31.707 | 164 | 70 | 5 | 18 | 143 | 5 | 164 | 4.33e-15 | 69.7 |
| Msa0611570 | AT2G40935.5 | 31.707 | 164 | 70 | 5 | 18 | 143 | 5 | 164 | 4.33e-15 | 69.7 |
| Msa0611570 | AT2G40935.3 | 33.553 | 152 | 70 | 6 | 19 | 143 | 6 | 153 | 4.70e-13 | 64.3 |
| Msa0611570 | AT2G40935.2 | 54.237 | 59 | 22 | 2 | 88 | 143 | 84 | 140 | 1.13e-12 | 62.8 |
| Msa0611570 | AT2G40935.7 | 54.237 | 59 | 22 | 2 | 88 | 143 | 84 | 140 | 1.13e-12 | 62.8 |
| Msa0611570 | AT2G40935.4 | 54.237 | 59 | 22 | 2 | 88 | 143 | 84 | 140 | 1.13e-12 | 62.8 |
| Msa0611570 | AT1G52200.2 | 34.646 | 127 | 61 | 4 | 38 | 143 | 30 | 155 | 1.68e-11 | 60.1 |
| Msa0611570 | AT1G52200.1 | 34.646 | 127 | 61 | 4 | 38 | 143 | 30 | 155 | 1.70e-11 | 60.1 |
| Msa0611570 | AT1G58320.1 | 42.857 | 105 | 37 | 6 | 61 | 143 | 16 | 119 | 5.61e-11 | 58.2 |
| Msa0611570 | AT5G51400.1 | 39.362 | 94 | 52 | 3 | 73 | 166 | 126 | 214 | 7.15e-11 | 59.3 |
Find 48 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGATGGAACAATTTA+TGG | 0.162988 | 4_2:-59813681 | Msa0611570:CDS |
| CTTGAACTGGTGCTGATATA+TGG | 0.295600 | 4_2:+59814313 | None:intergenic |
| TCTTGGGATGCCCCTTGAAC+TGG | 0.352985 | 4_2:+59814300 | None:intergenic |
| ACATGATCTGTTTCACTTAC+GGG | 0.365548 | 4_2:+59814442 | None:intergenic |
| GTTGACCAGTGATGTGTTCT+TGG | 0.377366 | 4_2:+59814283 | None:intergenic |
| TGAAACTTGTGCTCTTTGTC+AGG | 0.408519 | 4_2:-59813538 | Msa0611570:CDS |
| CTTGCCAGAGGCACCTTGTA+TGG | 0.422756 | 4_2:-59813583 | Msa0611570:CDS |
| ACACGATCCTTACAGATTCC+AGG | 0.423026 | 4_2:+59814235 | None:intergenic |
| AGAACACATCACTGGTCAAC+TGG | 0.424557 | 4_2:-59814280 | Msa0611570:CDS |
| TGCCGTTGTCTTGATGATCC+TGG | 0.428665 | 4_2:-59814253 | Msa0611570:CDS |
| AACAATTTATGGGGCGCTAC+TGG | 0.429042 | 4_2:-59813670 | Msa0611570:CDS |
| TACATGATCTGTTTCACTTA+CGG | 0.430083 | 4_2:+59814441 | None:intergenic |
| CTGATATATGGAGGAGCATA+AGG | 0.431906 | 4_2:+59814325 | None:intergenic |
| TTGACCAGTGATGTGTTCTT+GGG | 0.472581 | 4_2:+59814284 | None:intergenic |
| GGGGCGCTACTGGCTGTGTC+GGG | 0.479808 | 4_2:-59813660 | Msa0611570:CDS |
| TGGGGCGCTACTGGCTGTGT+CGG | 0.483383 | 4_2:-59813661 | Msa0611570:CDS |
| CTTGTCATAGGTGAAATCAT+TGG | 0.483757 | 4_2:+59812547 | None:intergenic |
| CAGTCCATACAAGGTGCCTC+TGG | 0.489012 | 4_2:+59813579 | None:intergenic |
| GTCCTACAAATGCCAAGTTA+TGG | 0.492297 | 4_2:-59814364 | Msa0611570:CDS |
| TGCCATAACTTGGCATTTGT+AGG | 0.492803 | 4_2:+59814362 | None:intergenic |
| CTTGTGATGGAACAATTTAT+GGG | 0.493346 | 4_2:-59813680 | Msa0611570:CDS |
| CATATATCAGCACCAGTTCA+AGG | 0.493929 | 4_2:-59814312 | Msa0611570:CDS |
| GACACTGGCATGCCATAACT+TGG | 0.500092 | 4_2:+59814352 | None:intergenic |
| GGACATAGCCTTGACCTTGA+GGG | 0.520075 | 4_2:+59814383 | None:intergenic |
| TGATGATCCTGGAATCTGTA+AGG | 0.521935 | 4_2:-59814242 | Msa0611570:CDS |
| GGTGGTGCTAGTGCAACTCC+TGG | 0.522010 | 4_2:+59812568 | None:intergenic |
| GGAGCATAAGGTTGTGACAC+TGG | 0.542568 | 4_2:+59814337 | None:intergenic |
| TGGCCTCTGTCTTTCCACGT+TGG | 0.547801 | 4_2:+59812588 | None:intergenic |
| TGAACTAAGCAGTCCATACA+AGG | 0.555249 | 4_2:+59813570 | None:intergenic |
| TATGCAGATCATAGTAGTCA+TGG | 0.562595 | 4_2:-59814418 | Msa0611570:CDS |
| ATATATCAGCACCAGTTCAA+GGG | 0.567137 | 4_2:-59814311 | Msa0611570:CDS |
| GTTATTATCGCTCAAAACTG+AGG | 0.570843 | 4_2:-59813617 | Msa0611570:CDS |
| AACGTGGAAAGACAGAGGCC+AGG | 0.580413 | 4_2:-59812586 | Msa0611570:CDS |
| AGGACATAGCCTTGACCTTG+AGG | 0.581870 | 4_2:+59814382 | None:intergenic |
| GACATAGCCTTGACCTTGAG+GGG | 0.583468 | 4_2:+59814384 | None:intergenic |
| TATGCAGCTTGCACTTGTGA+TGG | 0.596135 | 4_2:-59813693 | Msa0611570:intron |
| GTCATAGGTGAAATCATTGG+TGG | 0.613790 | 4_2:+59812550 | None:intergenic |
| GCATCCCAAGAACACATCAC+TGG | 0.621240 | 4_2:-59814288 | Msa0611570:CDS |
| TATATCAGCACCAGTTCAAG+GGG | 0.623123 | 4_2:-59814310 | Msa0611570:CDS |
| TTATTATCGCTCAAAACTGA+GGG | 0.630443 | 4_2:-59813616 | Msa0611570:CDS |
| TTGTGATGGAACAATTTATG+GGG | 0.659307 | 4_2:-59813679 | Msa0611570:CDS |
| TTCCAGGATCATCAAGACAA+CGG | 0.663060 | 4_2:+59814251 | None:intergenic |
| TGATCTGTTTCACTTACGGG+AGG | 0.664833 | 4_2:+59814445 | None:intergenic |
| TATAGGTTGGGATGCCAACG+TGG | 0.677748 | 4_2:-59812602 | Msa0611570:intron |
| ACATAGCCTTGACCTTGAGG+GGG | 0.690202 | 4_2:+59814385 | None:intergenic |
| ATGCCAACGTGGAAAGACAG+AGG | 0.696902 | 4_2:-59812591 | Msa0611570:CDS |
| GAACTGGTGCTGATATATGG+AGG | 0.713639 | 4_2:+59814316 | None:intergenic |
| GGCACAATATGACTTGCCAG+AGG | 0.740534 | 4_2:-59813595 | Msa0611570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACACATATTATATATATTA+TGG | - | chr4_2:59812807-59812826 | Msa0611570:intron | 10.0% |
| !!! | TAAGCTTTTATATAAAATAT+AGG | - | chr4_2:59812939-59812958 | Msa0611570:intron | 10.0% |
| !! | ATTAAATGAAATTAAGTTAA+GGG | - | chr4_2:59813192-59813211 | Msa0611570:intron | 10.0% |
| !! | TTAATATACTAAATTAAACT+TGG | - | chr4_2:59813550-59813569 | Msa0611570:CDS | 10.0% |
| !! | AACACATATTATATATATTA+TGG | - | chr4_2:59812807-59812826 | Msa0611570:intron | 10.0% |
| !!! | TAAGCTTTTATATAAAATAT+AGG | - | chr4_2:59812939-59812958 | Msa0611570:intron | 10.0% |
| !! | ATTAAATGAAATTAAGTTAA+GGG | - | chr4_2:59813192-59813211 | Msa0611570:intron | 10.0% |
| !! | TTAATATACTAAATTAAACT+TGG | - | chr4_2:59813550-59813569 | Msa0611570:CDS | 10.0% |
| !!! | ATAATATGTGTTTTAAAGAA+AGG | + | chr4_2:59812799-59812818 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTCTAATTGATA+AGG | - | chr4_2:59812840-59812859 | Msa0611570:intron | 15.0% |
| !!! | CTTAATTTCATTTAATGTTT+TGG | + | chr4_2:59813188-59813207 | None:intergenic | 15.0% |
| !! | CATTAAATGAAATTAAGTTA+AGG | - | chr4_2:59813191-59813210 | Msa0611570:intron | 15.0% |
| !! | TTAAATGAAATTAAGTTAAG+GGG | - | chr4_2:59813193-59813212 | Msa0611570:intron | 15.0% |
| !!! | CATTATTATTTATCATGTTT+TGG | - | chr4_2:59813272-59813291 | Msa0611570:intron | 15.0% |
| !!! | CATTTTATTTTTCTATTTGT+TGG | + | chr4_2:59814039-59814058 | None:intergenic | 15.0% |
| !! | TAGAAAAATCTATTACAATA+AGG | - | chr4_2:59814094-59814113 | Msa0611570:intron | 15.0% |
| !!! | ATAAGATTTTTATCTTAGTA+AGG | + | chr4_2:59814124-59814143 | None:intergenic | 15.0% |
| !!! | GTTTCTAATTTAAATTTTTG+AGG | - | chr4_2:59814307-59814326 | Msa0611570:CDS | 15.0% |
| !!! | ATAATATGTGTTTTAAAGAA+AGG | + | chr4_2:59812799-59812818 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTCTAATTGATA+AGG | - | chr4_2:59812840-59812859 | Msa0611570:intron | 15.0% |
| !!! | CTTAATTTCATTTAATGTTT+TGG | + | chr4_2:59813188-59813207 | None:intergenic | 15.0% |
| !! | CATTAAATGAAATTAAGTTA+AGG | - | chr4_2:59813191-59813210 | Msa0611570:intron | 15.0% |
| !! | TTAAATGAAATTAAGTTAAG+GGG | - | chr4_2:59813193-59813212 | Msa0611570:intron | 15.0% |
| !!! | CATTATTATTTATCATGTTT+TGG | - | chr4_2:59813272-59813291 | Msa0611570:intron | 15.0% |
| !!! | CATTTTATTTTTCTATTTGT+TGG | + | chr4_2:59814039-59814058 | None:intergenic | 15.0% |
| !! | TAGAAAAATCTATTACAATA+AGG | - | chr4_2:59814094-59814113 | Msa0611570:intron | 15.0% |
| !!! | ATAAGATTTTTATCTTAGTA+AGG | + | chr4_2:59814124-59814143 | None:intergenic | 15.0% |
| !!! | GTTTCTAATTTAAATTTTTG+AGG | - | chr4_2:59814307-59814326 | Msa0611570:CDS | 15.0% |
| !!! | TATCTTTTTTCATGTCATTT+TGG | - | chr4_2:59813015-59813034 | Msa0611570:intron | 20.0% |
| !!! | GTTTTTTCTCATGTAATTTT+GGG | + | chr4_2:59813158-59813177 | None:intergenic | 20.0% |
| !!! | AGTTTTTTCTCATGTAATTT+TGG | + | chr4_2:59813159-59813178 | None:intergenic | 20.0% |
| !! | AAGTATTTGAAGAAAGAATT+AGG | + | chr4_2:59813527-59813546 | None:intergenic | 20.0% |
| !! | TTAAGAAAATAGAGATTCTT+GGG | + | chr4_2:59814264-59814283 | None:intergenic | 20.0% |
| !! | ATTAAGAAAATAGAGATTCT+TGG | + | chr4_2:59814265-59814284 | None:intergenic | 20.0% |
| !!! | TATCTTTTTTCATGTCATTT+TGG | - | chr4_2:59813015-59813034 | Msa0611570:intron | 20.0% |
| !!! | GTTTTTTCTCATGTAATTTT+GGG | + | chr4_2:59813158-59813177 | None:intergenic | 20.0% |
| !!! | AGTTTTTTCTCATGTAATTT+TGG | + | chr4_2:59813159-59813178 | None:intergenic | 20.0% |
| !! | AAGTATTTGAAGAAAGAATT+AGG | + | chr4_2:59813527-59813546 | None:intergenic | 20.0% |
| !! | TTAAGAAAATAGAGATTCTT+GGG | + | chr4_2:59814264-59814283 | None:intergenic | 20.0% |
| !! | ATTAAGAAAATAGAGATTCT+TGG | + | chr4_2:59814265-59814284 | None:intergenic | 20.0% |
| !! | CTTTTCTAATTGATAAGGTT+TGG | - | chr4_2:59812845-59812864 | Msa0611570:intron | 25.0% |
| ! | ATGACATGAAAAAAGATACA+AGG | + | chr4_2:59813013-59813032 | None:intergenic | 25.0% |
| !!! | ATTTTCAAGCTTCAAATCTA+TGG | - | chr4_2:59813053-59813072 | Msa0611570:intron | 25.0% |
| ! | TGTTGTTGGATATATAATAG+AGG | - | chr4_2:59813687-59813706 | Msa0611570:CDS | 25.0% |
| ! | GAATAAAATGTAACGTCTTA+AGG | - | chr4_2:59813969-59813988 | Msa0611570:intron | 25.0% |
| ! | TTTAAATTAGAAACCCAACT+TGG | + | chr4_2:59814301-59814320 | None:intergenic | 25.0% |
| !! | CTTTTCTAATTGATAAGGTT+TGG | - | chr4_2:59812845-59812864 | Msa0611570:intron | 25.0% |
| ! | ATGACATGAAAAAAGATACA+AGG | + | chr4_2:59813013-59813032 | None:intergenic | 25.0% |
| !!! | ATTTTCAAGCTTCAAATCTA+TGG | - | chr4_2:59813053-59813072 | Msa0611570:intron | 25.0% |
| ! | TGTTGTTGGATATATAATAG+AGG | - | chr4_2:59813687-59813706 | Msa0611570:CDS | 25.0% |
| ! | GAATAAAATGTAACGTCTTA+AGG | - | chr4_2:59813969-59813988 | Msa0611570:intron | 25.0% |
| ! | TTTAAATTAGAAACCCAACT+TGG | + | chr4_2:59814301-59814320 | None:intergenic | 25.0% |
| TACATGATCTGTTTCACTTA+CGG | + | chr4_2:59812556-59812575 | None:intergenic | 30.0% | |
| TCAATCCAAAAGTAACACAT+GGG | + | chr4_2:59812884-59812903 | None:intergenic | 30.0% | |
| ATCAATCCAAAAGTAACACA+TGG | + | chr4_2:59812885-59812904 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCATGTCATTTTGG+TGG | - | chr4_2:59813018-59813037 | Msa0611570:intron | 30.0% |
| ! | TTTATTTACCTGTGACTTGT+CGG | - | chr4_2:59813077-59813096 | Msa0611570:intron | 30.0% |
| ! | TCATGTAATTTTGGGCTTTT+TGG | + | chr4_2:59813150-59813169 | None:intergenic | 30.0% |
| AAATTAAGTTAAGGGGAAAC+AGG | - | chr4_2:59813200-59813219 | Msa0611570:intron | 30.0% | |
| ! | ACTTGTGATGGAACAATTTA+TGG | - | chr4_2:59813313-59813332 | Msa0611570:intron | 30.0% |
| ! | CTTGTGATGGAACAATTTAT+GGG | - | chr4_2:59813314-59813333 | Msa0611570:intron | 30.0% |
| ! | TTGTGATGGAACAATTTATG+GGG | - | chr4_2:59813315-59813334 | Msa0611570:intron | 30.0% |
| TTATTATCGCTCAAAACTGA+GGG | - | chr4_2:59813378-59813397 | Msa0611570:intron | 30.0% | |
| ATGTTGAATTCAAGTGTAAG+TGG | - | chr4_2:59813632-59813651 | Msa0611570:CDS | 30.0% | |
| TGTTGGATATATAATAGAGG+TGG | - | chr4_2:59813690-59813709 | Msa0611570:intron | 30.0% | |
| ! | CCTTAAGGTATTAGGTATAT+GGG | + | chr4_2:59813716-59813735 | None:intergenic | 30.0% |
| ! | ACCTTAAGGTATTAGGTATA+TGG | + | chr4_2:59813717-59813736 | None:intergenic | 30.0% |
| ! | TACCTAATACCTTAAGGTTT+TGG | - | chr4_2:59813719-59813738 | Msa0611570:intron | 30.0% |
| ! | TTCCAAAACCTTAAGGTATT+AGG | + | chr4_2:59813724-59813743 | None:intergenic | 30.0% |
| !!! | TAATACCTTAAGGTTTTGGA+AGG | - | chr4_2:59813723-59813742 | Msa0611570:intron | 30.0% |
| TTGTGTTGGATCCTATTATA+GGG | - | chr4_2:59813875-59813894 | Msa0611570:intron | 30.0% | |
| ! | AATGTAACGTCTTAAGGTTT+TGG | - | chr4_2:59813975-59813994 | Msa0611570:intron | 30.0% |
| ! | ATGTAACGTCTTAAGGTTTT+GGG | - | chr4_2:59813976-59813995 | Msa0611570:intron | 30.0% |
| AACTTGCACTTAATACTAAC+CGG | - | chr4_2:59814147-59814166 | Msa0611570:intron | 30.0% | |
| ! | ATCTAGTTGAAGTTTGTTCA+AGG | + | chr4_2:59814183-59814202 | None:intergenic | 30.0% |
| GTTAGTTGTGTGATATCATA+TGG | - | chr4_2:59814343-59814362 | Msa0611570:CDS | 30.0% | |
| TACATGATCTGTTTCACTTA+CGG | + | chr4_2:59812556-59812575 | None:intergenic | 30.0% | |
| TCAATCCAAAAGTAACACAT+GGG | + | chr4_2:59812884-59812903 | None:intergenic | 30.0% | |
| ATCAATCCAAAAGTAACACA+TGG | + | chr4_2:59812885-59812904 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCATGTCATTTTGG+TGG | - | chr4_2:59813018-59813037 | Msa0611570:intron | 30.0% |
| ! | TTTATTTACCTGTGACTTGT+CGG | - | chr4_2:59813077-59813096 | Msa0611570:intron | 30.0% |
| ! | TCATGTAATTTTGGGCTTTT+TGG | + | chr4_2:59813150-59813169 | None:intergenic | 30.0% |
| AAATTAAGTTAAGGGGAAAC+AGG | - | chr4_2:59813200-59813219 | Msa0611570:intron | 30.0% | |
| ! | ACTTGTGATGGAACAATTTA+TGG | - | chr4_2:59813313-59813332 | Msa0611570:intron | 30.0% |
| ! | CTTGTGATGGAACAATTTAT+GGG | - | chr4_2:59813314-59813333 | Msa0611570:intron | 30.0% |
| ! | TTGTGATGGAACAATTTATG+GGG | - | chr4_2:59813315-59813334 | Msa0611570:intron | 30.0% |
| TTATTATCGCTCAAAACTGA+GGG | - | chr4_2:59813378-59813397 | Msa0611570:intron | 30.0% | |
| ATGTTGAATTCAAGTGTAAG+TGG | - | chr4_2:59813632-59813651 | Msa0611570:CDS | 30.0% | |
| TGTTGGATATATAATAGAGG+TGG | - | chr4_2:59813690-59813709 | Msa0611570:intron | 30.0% | |
| ! | CCTTAAGGTATTAGGTATAT+GGG | + | chr4_2:59813716-59813735 | None:intergenic | 30.0% |
| ! | ACCTTAAGGTATTAGGTATA+TGG | + | chr4_2:59813717-59813736 | None:intergenic | 30.0% |
| ! | TACCTAATACCTTAAGGTTT+TGG | - | chr4_2:59813719-59813738 | Msa0611570:intron | 30.0% |
| ! | TTCCAAAACCTTAAGGTATT+AGG | + | chr4_2:59813724-59813743 | None:intergenic | 30.0% |
| !!! | TAATACCTTAAGGTTTTGGA+AGG | - | chr4_2:59813723-59813742 | Msa0611570:intron | 30.0% |
| TTGTGTTGGATCCTATTATA+GGG | - | chr4_2:59813875-59813894 | Msa0611570:intron | 30.0% | |
| ! | AATGTAACGTCTTAAGGTTT+TGG | - | chr4_2:59813975-59813994 | Msa0611570:intron | 30.0% |
| ! | ATGTAACGTCTTAAGGTTTT+GGG | - | chr4_2:59813976-59813995 | Msa0611570:intron | 30.0% |
| AACTTGCACTTAATACTAAC+CGG | - | chr4_2:59814147-59814166 | Msa0611570:intron | 30.0% | |
| ! | ATCTAGTTGAAGTTTGTTCA+AGG | + | chr4_2:59814183-59814202 | None:intergenic | 30.0% |
| GTTAGTTGTGTGATATCATA+TGG | - | chr4_2:59814343-59814362 | Msa0611570:CDS | 30.0% | |
| ACATGATCTGTTTCACTTAC+GGG | + | chr4_2:59812555-59812574 | None:intergenic | 35.0% | |
| TATGCAGATCATAGTAGTCA+TGG | - | chr4_2:59812576-59812595 | Msa0611570:CDS | 35.0% | |
| ATATATCAGCACCAGTTCAA+GGG | - | chr4_2:59812683-59812702 | Msa0611570:intron | 35.0% | |
| ATAGCAGAGATAGTAGACAA+AGG | - | chr4_2:59812903-59812922 | Msa0611570:intron | 35.0% | |
| CGTTGTTCATATGCAAACAT+GGG | + | chr4_2:59813125-59813144 | None:intergenic | 35.0% | |
| CCATGTTTGCATATGAACAA+CGG | - | chr4_2:59813123-59813142 | Msa0611570:intron | 35.0% | |
| GTTATTATCGCTCAAAACTG+AGG | - | chr4_2:59813377-59813396 | Msa0611570:intron | 35.0% | |
| TGAGATGAGAAAACATGGTT+TGG | - | chr4_2:59813597-59813616 | Msa0611570:CDS | 35.0% | |
| GTCAATGGGTAAAATGTTGT+TGG | - | chr4_2:59813673-59813692 | Msa0611570:CDS | 35.0% | |
| CCCATATACCTAATACCTTA+AGG | - | chr4_2:59813713-59813732 | Msa0611570:intron | 35.0% | |
| CTTGTGTTGGATCCTATTAT+AGG | - | chr4_2:59813874-59813893 | Msa0611570:intron | 35.0% | |
| AATAGAGATCCGACTAAAAG+TGG | - | chr4_2:59814226-59814245 | Msa0611570:intron | 35.0% | |
| !! | TTTTTGTCTAGCTTCCAAGT+TGG | - | chr4_2:59814284-59814303 | Msa0611570:CDS | 35.0% |
| !! | TTTTGTCTAGCTTCCAAGTT+GGG | - | chr4_2:59814285-59814304 | Msa0611570:CDS | 35.0% |
| TTTGCTTGACCCTTGAATAT+AGG | - | chr4_2:59814375-59814394 | Msa0611570:CDS | 35.0% | |
| TTGACCCTTGAATATAGGTT+GGG | - | chr4_2:59814380-59814399 | Msa0611570:CDS | 35.0% | |
| CTTGTCATAGGTGAAATCAT+TGG | + | chr4_2:59814450-59814469 | None:intergenic | 35.0% | |
| ACATGATCTGTTTCACTTAC+GGG | + | chr4_2:59812555-59812574 | None:intergenic | 35.0% | |
| TATGCAGATCATAGTAGTCA+TGG | - | chr4_2:59812576-59812595 | Msa0611570:CDS | 35.0% | |
| ATATATCAGCACCAGTTCAA+GGG | - | chr4_2:59812683-59812702 | Msa0611570:intron | 35.0% | |
| ATAGCAGAGATAGTAGACAA+AGG | - | chr4_2:59812903-59812922 | Msa0611570:intron | 35.0% | |
| CGTTGTTCATATGCAAACAT+GGG | + | chr4_2:59813125-59813144 | None:intergenic | 35.0% | |
| CCATGTTTGCATATGAACAA+CGG | - | chr4_2:59813123-59813142 | Msa0611570:intron | 35.0% | |
| GTTATTATCGCTCAAAACTG+AGG | - | chr4_2:59813377-59813396 | Msa0611570:intron | 35.0% | |
| TGAGATGAGAAAACATGGTT+TGG | - | chr4_2:59813597-59813616 | Msa0611570:CDS | 35.0% | |
| GTCAATGGGTAAAATGTTGT+TGG | - | chr4_2:59813673-59813692 | Msa0611570:CDS | 35.0% | |
| CCCATATACCTAATACCTTA+AGG | - | chr4_2:59813713-59813732 | Msa0611570:intron | 35.0% | |
| CTTGTGTTGGATCCTATTAT+AGG | - | chr4_2:59813874-59813893 | Msa0611570:intron | 35.0% | |
| AATAGAGATCCGACTAAAAG+TGG | - | chr4_2:59814226-59814245 | Msa0611570:intron | 35.0% | |
| !! | TTTTTGTCTAGCTTCCAAGT+TGG | - | chr4_2:59814284-59814303 | Msa0611570:CDS | 35.0% |
| !! | TTTTGTCTAGCTTCCAAGTT+GGG | - | chr4_2:59814285-59814304 | Msa0611570:CDS | 35.0% |
| TTTGCTTGACCCTTGAATAT+AGG | - | chr4_2:59814375-59814394 | Msa0611570:CDS | 35.0% | |
| TTGACCCTTGAATATAGGTT+GGG | - | chr4_2:59814380-59814399 | Msa0611570:CDS | 35.0% | |
| CTTGTCATAGGTGAAATCAT+TGG | + | chr4_2:59814450-59814469 | None:intergenic | 35.0% | |
| GTCCTACAAATGCCAAGTTA+TGG | - | chr4_2:59812630-59812649 | Msa0611570:intron | 40.0% | |
| TGCCATAACTTGGCATTTGT+AGG | + | chr4_2:59812635-59812654 | None:intergenic | 40.0% | |
| ! | CTGATATATGGAGGAGCATA+AGG | + | chr4_2:59812672-59812691 | None:intergenic | 40.0% |
| !! | CTTGAACTGGTGCTGATATA+TGG | + | chr4_2:59812684-59812703 | None:intergenic | 40.0% |
| CATATATCAGCACCAGTTCA+AGG | - | chr4_2:59812682-59812701 | Msa0611570:intron | 40.0% | |
| TATATCAGCACCAGTTCAAG+GGG | - | chr4_2:59812684-59812703 | Msa0611570:intron | 40.0% | |
| TTGACCAGTGATGTGTTCTT+GGG | + | chr4_2:59812713-59812732 | None:intergenic | 40.0% | |
| TTCCAGGATCATCAAGACAA+CGG | + | chr4_2:59812746-59812765 | None:intergenic | 40.0% | |
| TGATGATCCTGGAATCTGTA+AGG | - | chr4_2:59812752-59812771 | Msa0611570:intron | 40.0% | |
| !!! | TTCTGCCCATGTGTTACTTT+TGG | - | chr4_2:59812876-59812895 | Msa0611570:intron | 40.0% |
| CTTGTCGGTCTTCAAATCTA+TGG | - | chr4_2:59813092-59813111 | Msa0611570:intron | 40.0% | |
| CCGTTGTTCATATGCAAACA+TGG | + | chr4_2:59813126-59813145 | None:intergenic | 40.0% | |
| TGAACTAAGCAGTCCATACA+AGG | + | chr4_2:59813427-59813446 | None:intergenic | 40.0% | |
| TGAAACTTGTGCTCTTTGTC+AGG | - | chr4_2:59813456-59813475 | Msa0611570:intron | 40.0% | |
| TACAGAGAACTCAAAAACCG+TGG | - | chr4_2:59813481-59813500 | Msa0611570:intron | 40.0% | |
| CTATGCTCATGTCATATCCA+CGG | + | chr4_2:59813501-59813520 | None:intergenic | 40.0% | |
| GGATCTCTTAAGCAATGTCT+CGG | - | chr4_2:59813571-59813590 | Msa0611570:CDS | 40.0% | |
| GATCTCTTAAGCAATGTCTC+GGG | - | chr4_2:59813572-59813591 | Msa0611570:CDS | 40.0% | |
| ! | GGGTTTGAGATGAGAAAACA+TGG | - | chr4_2:59813592-59813611 | Msa0611570:CDS | 40.0% |
| AGTCTCACATCTCATGTCAA+TGG | - | chr4_2:59813658-59813677 | Msa0611570:CDS | 40.0% | |
| GTCTCACATCTCATGTCAAT+GGG | - | chr4_2:59813659-59813678 | Msa0611570:CDS | 40.0% | |
| CATCTCCTTCCAAAACCTTA+AGG | + | chr4_2:59813731-59813750 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTGGAAGGAGATG+TGG | - | chr4_2:59813731-59813750 | Msa0611570:intron | 40.0% |
| AGGGATCTGATACAACTTGT+CGG | + | chr4_2:59813822-59813841 | None:intergenic | 40.0% | |
| TTGTTGGATTCAAGTGTGAG+TGG | - | chr4_2:59813922-59813941 | Msa0611570:intron | 40.0% | |
| !!! | AACGTCTTAAGGTTTTGGGT+TGG | - | chr4_2:59813980-59813999 | Msa0611570:intron | 40.0% |
| !! | TTGGACTCTAGAGCACAAAA+GGG | + | chr4_2:59814020-59814039 | None:intergenic | 40.0% |
| TGTTCAAGGTAGTTACAAGC+CGG | + | chr4_2:59814169-59814188 | None:intergenic | 40.0% | |
| !! | CCTCACTAACCACTTTTAGT+CGG | + | chr4_2:59814238-59814257 | None:intergenic | 40.0% |
| CTTGACCCTTGAATATAGGT+TGG | - | chr4_2:59814379-59814398 | Msa0611570:CDS | 40.0% | |
| GCATCCCAACCTATATTCAA+GGG | + | chr4_2:59814387-59814406 | None:intergenic | 40.0% | |
| GTCATAGGTGAAATCATTGG+TGG | + | chr4_2:59814447-59814466 | None:intergenic | 40.0% | |
| GTCCTACAAATGCCAAGTTA+TGG | - | chr4_2:59812630-59812649 | Msa0611570:intron | 40.0% | |
| TGCCATAACTTGGCATTTGT+AGG | + | chr4_2:59812635-59812654 | None:intergenic | 40.0% | |
| ! | CTGATATATGGAGGAGCATA+AGG | + | chr4_2:59812672-59812691 | None:intergenic | 40.0% |
| !! | CTTGAACTGGTGCTGATATA+TGG | + | chr4_2:59812684-59812703 | None:intergenic | 40.0% |
| CATATATCAGCACCAGTTCA+AGG | - | chr4_2:59812682-59812701 | Msa0611570:intron | 40.0% | |
| TATATCAGCACCAGTTCAAG+GGG | - | chr4_2:59812684-59812703 | Msa0611570:intron | 40.0% | |
| TTGACCAGTGATGTGTTCTT+GGG | + | chr4_2:59812713-59812732 | None:intergenic | 40.0% | |
| TTCCAGGATCATCAAGACAA+CGG | + | chr4_2:59812746-59812765 | None:intergenic | 40.0% | |
| TGATGATCCTGGAATCTGTA+AGG | - | chr4_2:59812752-59812771 | Msa0611570:intron | 40.0% | |
| !!! | TTCTGCCCATGTGTTACTTT+TGG | - | chr4_2:59812876-59812895 | Msa0611570:intron | 40.0% |
| CTTGTCGGTCTTCAAATCTA+TGG | - | chr4_2:59813092-59813111 | Msa0611570:intron | 40.0% | |
| CCGTTGTTCATATGCAAACA+TGG | + | chr4_2:59813126-59813145 | None:intergenic | 40.0% | |
| TGAACTAAGCAGTCCATACA+AGG | + | chr4_2:59813427-59813446 | None:intergenic | 40.0% | |
| TGAAACTTGTGCTCTTTGTC+AGG | - | chr4_2:59813456-59813475 | Msa0611570:intron | 40.0% | |
| TACAGAGAACTCAAAAACCG+TGG | - | chr4_2:59813481-59813500 | Msa0611570:intron | 40.0% | |
| CTATGCTCATGTCATATCCA+CGG | + | chr4_2:59813501-59813520 | None:intergenic | 40.0% | |
| GGATCTCTTAAGCAATGTCT+CGG | - | chr4_2:59813571-59813590 | Msa0611570:CDS | 40.0% | |
| GATCTCTTAAGCAATGTCTC+GGG | - | chr4_2:59813572-59813591 | Msa0611570:CDS | 40.0% | |
| ! | GGGTTTGAGATGAGAAAACA+TGG | - | chr4_2:59813592-59813611 | Msa0611570:CDS | 40.0% |
| AGTCTCACATCTCATGTCAA+TGG | - | chr4_2:59813658-59813677 | Msa0611570:CDS | 40.0% | |
| GTCTCACATCTCATGTCAAT+GGG | - | chr4_2:59813659-59813678 | Msa0611570:CDS | 40.0% | |
| CATCTCCTTCCAAAACCTTA+AGG | + | chr4_2:59813731-59813750 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTGGAAGGAGATG+TGG | - | chr4_2:59813731-59813750 | Msa0611570:intron | 40.0% |
| AGGGATCTGATACAACTTGT+CGG | + | chr4_2:59813822-59813841 | None:intergenic | 40.0% | |
| TTGTTGGATTCAAGTGTGAG+TGG | - | chr4_2:59813922-59813941 | Msa0611570:intron | 40.0% | |
| !!! | AACGTCTTAAGGTTTTGGGT+TGG | - | chr4_2:59813980-59813999 | Msa0611570:intron | 40.0% |
| !! | TTGGACTCTAGAGCACAAAA+GGG | + | chr4_2:59814020-59814039 | None:intergenic | 40.0% |
| TGTTCAAGGTAGTTACAAGC+CGG | + | chr4_2:59814169-59814188 | None:intergenic | 40.0% | |
| !! | CCTCACTAACCACTTTTAGT+CGG | + | chr4_2:59814238-59814257 | None:intergenic | 40.0% |
| CTTGACCCTTGAATATAGGT+TGG | - | chr4_2:59814379-59814398 | Msa0611570:CDS | 40.0% | |
| GCATCCCAACCTATATTCAA+GGG | + | chr4_2:59814387-59814406 | None:intergenic | 40.0% | |
| GTCATAGGTGAAATCATTGG+TGG | + | chr4_2:59814447-59814466 | None:intergenic | 40.0% | |
| TGATCTGTTTCACTTACGGG+AGG | + | chr4_2:59812552-59812571 | None:intergenic | 45.0% | |
| !! | GAACTGGTGCTGATATATGG+AGG | + | chr4_2:59812681-59812700 | None:intergenic | 45.0% |
| GTTGACCAGTGATGTGTTCT+TGG | + | chr4_2:59812714-59812733 | None:intergenic | 45.0% | |
| AGAACACATCACTGGTCAAC+TGG | - | chr4_2:59812714-59812733 | Msa0611570:intron | 45.0% | |
| ACACGATCCTTACAGATTCC+AGG | + | chr4_2:59812762-59812781 | None:intergenic | 45.0% | |
| TTTGAAGACCGACAAGTCAC+AGG | + | chr4_2:59813088-59813107 | None:intergenic | 45.0% | |
| TATGCAGCTTGCACTTGTGA+TGG | - | chr4_2:59813301-59813320 | Msa0611570:intron | 45.0% | |
| ! | AACAATTTATGGGGCGCTAC+TGG | - | chr4_2:59813324-59813343 | Msa0611570:intron | 45.0% |
| CGTGGATATGACATGAGCAT+AGG | - | chr4_2:59813499-59813518 | Msa0611570:intron | 45.0% | |
| ACAACTTGTCGGGGAGTTTA+GGG | + | chr4_2:59813811-59813830 | None:intergenic | 45.0% | |
| TACAACTTGTCGGGGAGTTT+AGG | + | chr4_2:59813812-59813831 | None:intergenic | 45.0% | |
| GGATCTGATACAACTTGTCG+GGG | + | chr4_2:59813820-59813839 | None:intergenic | 45.0% | |
| GGGATCTGATACAACTTGTC+GGG | + | chr4_2:59813821-59813840 | None:intergenic | 45.0% | |
| GACAAGTTGTATCAGATCCC+TGG | - | chr4_2:59813821-59813840 | Msa0611570:intron | 45.0% | |
| GTTGTATCAGATCCCTGGTT+CGG | - | chr4_2:59813826-59813845 | Msa0611570:intron | 45.0% | |
| TGCTTCTCACGCCCTATAAT+AGG | + | chr4_2:59813889-59813908 | None:intergenic | 45.0% | |
| !! | TGGACTCTAGAGCACAAAAG+GGG | + | chr4_2:59814019-59814038 | None:intergenic | 45.0% |
| !! | GTTGGACTCTAGAGCACAAA+AGG | + | chr4_2:59814021-59814040 | None:intergenic | 45.0% |
| CCGACTAAAAGTGGTTAGTG+AGG | - | chr4_2:59814235-59814254 | Msa0611570:intron | 45.0% | |
| GGCATCCCAACCTATATTCA+AGG | + | chr4_2:59814388-59814407 | None:intergenic | 45.0% | |
| TGATCTGTTTCACTTACGGG+AGG | + | chr4_2:59812552-59812571 | None:intergenic | 45.0% | |
| !! | GAACTGGTGCTGATATATGG+AGG | + | chr4_2:59812681-59812700 | None:intergenic | 45.0% |
| GTTGACCAGTGATGTGTTCT+TGG | + | chr4_2:59812714-59812733 | None:intergenic | 45.0% | |
| AGAACACATCACTGGTCAAC+TGG | - | chr4_2:59812714-59812733 | Msa0611570:intron | 45.0% | |
| ACACGATCCTTACAGATTCC+AGG | + | chr4_2:59812762-59812781 | None:intergenic | 45.0% | |
| TTTGAAGACCGACAAGTCAC+AGG | + | chr4_2:59813088-59813107 | None:intergenic | 45.0% | |
| TATGCAGCTTGCACTTGTGA+TGG | - | chr4_2:59813301-59813320 | Msa0611570:intron | 45.0% | |
| ! | AACAATTTATGGGGCGCTAC+TGG | - | chr4_2:59813324-59813343 | Msa0611570:intron | 45.0% |
| CGTGGATATGACATGAGCAT+AGG | - | chr4_2:59813499-59813518 | Msa0611570:intron | 45.0% | |
| ACAACTTGTCGGGGAGTTTA+GGG | + | chr4_2:59813811-59813830 | None:intergenic | 45.0% | |
| TACAACTTGTCGGGGAGTTT+AGG | + | chr4_2:59813812-59813831 | None:intergenic | 45.0% | |
| GGATCTGATACAACTTGTCG+GGG | + | chr4_2:59813820-59813839 | None:intergenic | 45.0% | |
| GGGATCTGATACAACTTGTC+GGG | + | chr4_2:59813821-59813840 | None:intergenic | 45.0% | |
| GACAAGTTGTATCAGATCCC+TGG | - | chr4_2:59813821-59813840 | Msa0611570:intron | 45.0% | |
| GTTGTATCAGATCCCTGGTT+CGG | - | chr4_2:59813826-59813845 | Msa0611570:intron | 45.0% | |
| TGCTTCTCACGCCCTATAAT+AGG | + | chr4_2:59813889-59813908 | None:intergenic | 45.0% | |
| !! | TGGACTCTAGAGCACAAAAG+GGG | + | chr4_2:59814019-59814038 | None:intergenic | 45.0% |
| !! | GTTGGACTCTAGAGCACAAA+AGG | + | chr4_2:59814021-59814040 | None:intergenic | 45.0% |
| CCGACTAAAAGTGGTTAGTG+AGG | - | chr4_2:59814235-59814254 | Msa0611570:intron | 45.0% | |
| GGCATCCCAACCTATATTCA+AGG | + | chr4_2:59814388-59814407 | None:intergenic | 45.0% | |
| ! | ACATAGCCTTGACCTTGAGG+GGG | + | chr4_2:59812612-59812631 | None:intergenic | 50.0% |
| ! | GACATAGCCTTGACCTTGAG+GGG | + | chr4_2:59812613-59812632 | None:intergenic | 50.0% |
| ! | GGACATAGCCTTGACCTTGA+GGG | + | chr4_2:59812614-59812633 | None:intergenic | 50.0% |
| ! | AGGACATAGCCTTGACCTTG+AGG | + | chr4_2:59812615-59812634 | None:intergenic | 50.0% |
| GACACTGGCATGCCATAACT+TGG | + | chr4_2:59812645-59812664 | None:intergenic | 50.0% | |
| GGAGCATAAGGTTGTGACAC+TGG | + | chr4_2:59812660-59812679 | None:intergenic | 50.0% | |
| GCATCCCAAGAACACATCAC+TGG | - | chr4_2:59812706-59812725 | Msa0611570:intron | 50.0% | |
| ! | TGCCGTTGTCTTGATGATCC+TGG | - | chr4_2:59812741-59812760 | Msa0611570:intron | 50.0% |
| ! | GGCACAATATGACTTGCCAG+AGG | - | chr4_2:59813399-59813418 | Msa0611570:intron | 50.0% |
| AGGGAAGTCGGAAGCAACAA+CGG | + | chr4_2:59813792-59813811 | None:intergenic | 50.0% | |
| GCACTTGAGGGAGAGATTGT+TGG | - | chr4_2:59813906-59813925 | Msa0611570:intron | 50.0% | |
| !! | GGACTCTAGAGCACAAAAGG+GGG | + | chr4_2:59814018-59814037 | None:intergenic | 50.0% |
| ! | TATAGGTTGGGATGCCAACG+TGG | - | chr4_2:59814392-59814411 | Msa0611570:CDS | 50.0% |
| ATGCCAACGTGGAAAGACAG+AGG | - | chr4_2:59814403-59814422 | Msa0611570:CDS | 50.0% | |
| ! | ACATAGCCTTGACCTTGAGG+GGG | + | chr4_2:59812612-59812631 | None:intergenic | 50.0% |
| ! | GACATAGCCTTGACCTTGAG+GGG | + | chr4_2:59812613-59812632 | None:intergenic | 50.0% |
| ! | GGACATAGCCTTGACCTTGA+GGG | + | chr4_2:59812614-59812633 | None:intergenic | 50.0% |
| ! | AGGACATAGCCTTGACCTTG+AGG | + | chr4_2:59812615-59812634 | None:intergenic | 50.0% |
| GACACTGGCATGCCATAACT+TGG | + | chr4_2:59812645-59812664 | None:intergenic | 50.0% | |
| GGAGCATAAGGTTGTGACAC+TGG | + | chr4_2:59812660-59812679 | None:intergenic | 50.0% | |
| GCATCCCAAGAACACATCAC+TGG | - | chr4_2:59812706-59812725 | Msa0611570:intron | 50.0% | |
| ! | TGCCGTTGTCTTGATGATCC+TGG | - | chr4_2:59812741-59812760 | Msa0611570:intron | 50.0% |
| ! | GGCACAATATGACTTGCCAG+AGG | - | chr4_2:59813399-59813418 | Msa0611570:intron | 50.0% |
| AGGGAAGTCGGAAGCAACAA+CGG | + | chr4_2:59813792-59813811 | None:intergenic | 50.0% | |
| GCACTTGAGGGAGAGATTGT+TGG | - | chr4_2:59813906-59813925 | Msa0611570:intron | 50.0% | |
| !! | GGACTCTAGAGCACAAAAGG+GGG | + | chr4_2:59814018-59814037 | None:intergenic | 50.0% |
| ! | TATAGGTTGGGATGCCAACG+TGG | - | chr4_2:59814392-59814411 | Msa0611570:CDS | 50.0% |
| ATGCCAACGTGGAAAGACAG+AGG | - | chr4_2:59814403-59814422 | Msa0611570:CDS | 50.0% | |
| TCTTGGGATGCCCCTTGAAC+TGG | + | chr4_2:59812697-59812716 | None:intergenic | 55.0% | |
| !! | CTTGCCAGAGGCACCTTGTA+TGG | - | chr4_2:59813411-59813430 | Msa0611570:intron | 55.0% |
| ! | CAGTCCATACAAGGTGCCTC+TGG | + | chr4_2:59813418-59813437 | None:intergenic | 55.0% |
| TCTCCCTCTCTTGTGGGACT+TGG | - | chr4_2:59813756-59813775 | Msa0611570:intron | 55.0% | |
| GCTCCAAGTCCCACAAGAGA+GGG | + | chr4_2:59813762-59813781 | None:intergenic | 55.0% | |
| TGCTCCAAGTCCCACAAGAG+AGG | + | chr4_2:59813763-59813782 | None:intergenic | 55.0% | |
| GGGAAGTCGGAAGCAACAAC+GGG | + | chr4_2:59813791-59813810 | None:intergenic | 55.0% | |
| GTCGGGGAGTTTAGGGAAGT+CGG | + | chr4_2:59813804-59813823 | None:intergenic | 55.0% | |
| !! | ATCAGATCCCTGGTTCGGCT+TGG | - | chr4_2:59813831-59813850 | Msa0611570:intron | 55.0% |
| !! | ATCCCTGGTTCGGCTTGGAA+GGG | - | chr4_2:59813836-59813855 | Msa0611570:intron | 55.0% |
| GCTGGAGCTGGATCTTGTGT+TGG | - | chr4_2:59813861-59813880 | Msa0611570:intron | 55.0% | |
| !! | TAGGGCGTGAGAAGCACTTG+AGG | - | chr4_2:59813893-59813912 | Msa0611570:intron | 55.0% |
| !! | AGGGCGTGAGAAGCACTTGA+GGG | - | chr4_2:59813894-59813913 | Msa0611570:intron | 55.0% |
| TGGCCTCTGTCTTTCCACGT+TGG | + | chr4_2:59814409-59814428 | None:intergenic | 55.0% | |
| AACGTGGAAAGACAGAGGCC+AGG | - | chr4_2:59814408-59814427 | Msa0611570:CDS | 55.0% | |
| TCTTGGGATGCCCCTTGAAC+TGG | + | chr4_2:59812697-59812716 | None:intergenic | 55.0% | |
| !! | CTTGCCAGAGGCACCTTGTA+TGG | - | chr4_2:59813411-59813430 | Msa0611570:intron | 55.0% |
| ! | CAGTCCATACAAGGTGCCTC+TGG | + | chr4_2:59813418-59813437 | None:intergenic | 55.0% |
| TCTCCCTCTCTTGTGGGACT+TGG | - | chr4_2:59813756-59813775 | Msa0611570:intron | 55.0% | |
| GCTCCAAGTCCCACAAGAGA+GGG | + | chr4_2:59813762-59813781 | None:intergenic | 55.0% | |
| TGCTCCAAGTCCCACAAGAG+AGG | + | chr4_2:59813763-59813782 | None:intergenic | 55.0% | |
| GGGAAGTCGGAAGCAACAAC+GGG | + | chr4_2:59813791-59813810 | None:intergenic | 55.0% | |
| GTCGGGGAGTTTAGGGAAGT+CGG | + | chr4_2:59813804-59813823 | None:intergenic | 55.0% | |
| !! | ATCAGATCCCTGGTTCGGCT+TGG | - | chr4_2:59813831-59813850 | Msa0611570:intron | 55.0% |
| !! | ATCCCTGGTTCGGCTTGGAA+GGG | - | chr4_2:59813836-59813855 | Msa0611570:intron | 55.0% |
| GCTGGAGCTGGATCTTGTGT+TGG | - | chr4_2:59813861-59813880 | Msa0611570:intron | 55.0% | |
| !! | TAGGGCGTGAGAAGCACTTG+AGG | - | chr4_2:59813893-59813912 | Msa0611570:intron | 55.0% |
| !! | AGGGCGTGAGAAGCACTTGA+GGG | - | chr4_2:59813894-59813913 | Msa0611570:intron | 55.0% |
| TGGCCTCTGTCTTTCCACGT+TGG | + | chr4_2:59814409-59814428 | None:intergenic | 55.0% | |
| AACGTGGAAAGACAGAGGCC+AGG | - | chr4_2:59814408-59814427 | Msa0611570:CDS | 55.0% | |
| GACCTTGAGGGGGATGGCTA+TGG | + | chr4_2:59812602-59812621 | None:intergenic | 60.0% | |
| AGCCATCCCCCTCAAGGTCA+AGG | - | chr4_2:59812603-59812622 | Msa0611570:intron | 60.0% | |
| AGCCTTGACCTTGAGGGGGA+TGG | + | chr4_2:59812608-59812627 | None:intergenic | 60.0% | |
| TGTGGCGTCTCCCTCTCTTG+TGG | - | chr4_2:59813749-59813768 | Msa0611570:intron | 60.0% | |
| GTGGCGTCTCCCTCTCTTGT+GGG | - | chr4_2:59813750-59813769 | Msa0611570:intron | 60.0% | |
| !! | GATCCCTGGTTCGGCTTGGA+AGG | - | chr4_2:59813835-59813854 | Msa0611570:intron | 60.0% |
| !! | TCCCTGGTTCGGCTTGGAAG+GGG | - | chr4_2:59813837-59813856 | Msa0611570:intron | 60.0% |
| TCCCCTTCCAAGCCGAACCA+GGG | + | chr4_2:59813841-59813860 | None:intergenic | 60.0% | |
| ! | GGTGGTGCTAGTGCAACTCC+TGG | + | chr4_2:59814429-59814448 | None:intergenic | 60.0% |
| GACCTTGAGGGGGATGGCTA+TGG | + | chr4_2:59812602-59812621 | None:intergenic | 60.0% | |
| AGCCATCCCCCTCAAGGTCA+AGG | - | chr4_2:59812603-59812622 | Msa0611570:intron | 60.0% | |
| AGCCTTGACCTTGAGGGGGA+TGG | + | chr4_2:59812608-59812627 | None:intergenic | 60.0% | |
| TGTGGCGTCTCCCTCTCTTG+TGG | - | chr4_2:59813749-59813768 | Msa0611570:intron | 60.0% | |
| GTGGCGTCTCCCTCTCTTGT+GGG | - | chr4_2:59813750-59813769 | Msa0611570:intron | 60.0% | |
| !! | GATCCCTGGTTCGGCTTGGA+AGG | - | chr4_2:59813835-59813854 | Msa0611570:intron | 60.0% |
| !! | TCCCTGGTTCGGCTTGGAAG+GGG | - | chr4_2:59813837-59813856 | Msa0611570:intron | 60.0% |
| TCCCCTTCCAAGCCGAACCA+GGG | + | chr4_2:59813841-59813860 | None:intergenic | 60.0% | |
| ! | GGTGGTGCTAGTGCAACTCC+TGG | + | chr4_2:59814429-59814448 | None:intergenic | 60.0% |
| GGCCATAGCCATCCCCCTCA+AGG | - | chr4_2:59812597-59812616 | Msa0611570:CDS | 65.0% | |
| ! | TGGGGCGCTACTGGCTGTGT+CGG | - | chr4_2:59813333-59813352 | Msa0611570:intron | 65.0% |
| CTCCCCTTCCAAGCCGAACC+AGG | + | chr4_2:59813842-59813861 | None:intergenic | 65.0% | |
| !! | GTTCGGCTTGGAAGGGGAGC+TGG | - | chr4_2:59813843-59813862 | Msa0611570:intron | 65.0% |
| CTTGGAAGGGGAGCTGGAGC+TGG | - | chr4_2:59813849-59813868 | Msa0611570:intron | 65.0% | |
| GGCCATAGCCATCCCCCTCA+AGG | - | chr4_2:59812597-59812616 | Msa0611570:CDS | 65.0% | |
| ! | TGGGGCGCTACTGGCTGTGT+CGG | - | chr4_2:59813333-59813352 | Msa0611570:intron | 65.0% |
| CTCCCCTTCCAAGCCGAACC+AGG | + | chr4_2:59813842-59813861 | None:intergenic | 65.0% | |
| !! | GTTCGGCTTGGAAGGGGAGC+TGG | - | chr4_2:59813843-59813862 | Msa0611570:intron | 65.0% |
| CTTGGAAGGGGAGCTGGAGC+TGG | - | chr4_2:59813849-59813868 | Msa0611570:intron | 65.0% | |
| ! | GGGGCGCTACTGGCTGTGTC+GGG | - | chr4_2:59813334-59813353 | Msa0611570:intron | 70.0% |
| ! | GGGGCGCTACTGGCTGTGTC+GGG | - | chr4_2:59813334-59813353 | Msa0611570:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 59812543 | 59814473 | 59812543 | ID=Msa0611570;Name=Msa0611570 |
| chr4_2 | mRNA | 59812543 | 59814473 | 59812543 | ID=Msa0611570-mRNA-1;Parent=Msa0611570;Name=Msa0611570-mRNA-1;_AED=0.15;_eAED=0.18;_QI=0|0|0|1|0|0.33|3|0|167 |
| chr4_2 | exon | 59814239 | 59814473 | 59814239 | ID=Msa0611570-mRNA-1:exon:15990;Parent=Msa0611570-mRNA-1 |
| chr4_2 | exon | 59813517 | 59813708 | 59813517 | ID=Msa0611570-mRNA-1:exon:15989;Parent=Msa0611570-mRNA-1 |
| chr4_2 | exon | 59812543 | 59812619 | 59812543 | ID=Msa0611570-mRNA-1:exon:15988;Parent=Msa0611570-mRNA-1 |
| chr4_2 | CDS | 59814239 | 59814473 | 59814239 | ID=Msa0611570-mRNA-1:cds;Parent=Msa0611570-mRNA-1 |
| chr4_2 | CDS | 59813517 | 59813708 | 59813517 | ID=Msa0611570-mRNA-1:cds;Parent=Msa0611570-mRNA-1 |
| chr4_2 | CDS | 59812543 | 59812619 | 59812543 | ID=Msa0611570-mRNA-1:cds;Parent=Msa0611570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
