AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0619260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619260 MtrunA17_Chr8g0383211 75.704 675 150 6 23 685 4 676 0.0 1034
Msa0619260 MtrunA17_Chr8g0383181 94.828 290 13 1 20 307 1 290 0.0 573
Msa0619260 MtrunA17_Chr8g0383171 96.667 210 7 0 476 685 63 272 7.71e-145 422
Msa0619260 MtrunA17_Chr4g0052681 37.687 536 307 9 124 647 41 561 4.74e-108 340
Msa0619260 MtrunA17_Chr8g0383081 36.749 566 334 9 102 659 17 566 2.55e-107 337
Msa0619260 MtrunA17_Chr8g0383041 34.581 561 327 12 103 647 22 558 1.47e-94 304
Msa0619260 MtrunA17_Chr8g0354631 27.838 643 400 19 49 644 77 702 7.39e-74 253
Msa0619260 MtrunA17_Chr5g0402891 30.961 562 331 16 112 644 45 578 5.62e-69 237
Msa0619260 MtrunA17_Chr2g0308821 27.778 558 359 11 107 644 125 658 1.51e-64 226
Msa0619260 MtrunA17_Chr8g0383071 41.156 294 163 3 170 463 27 310 3.35e-64 215
Msa0619260 MtrunA17_Chr7g0263231 27.354 669 403 20 37 649 432 1073 1.15e-63 229
Msa0619260 MtrunA17_Chr8g0359341 27.314 659 407 15 41 644 65 706 2.08e-61 218
Msa0619260 MtrunA17_Chr7g0263261 28.194 681 404 22 26 649 362 1014 2.12e-61 222
Msa0619260 MtrunA17_Chr8g0383051 38.214 280 161 5 116 395 46 313 1.78e-49 176
Msa0619260 MtrunA17_Chr2g0333261 25.243 721 425 23 1 651 10 686 5.19e-49 183
Msa0619260 MtrunA17_Chr4g0053391 37.269 271 162 4 399 665 1 267 7.20e-46 164
Msa0619260 MtrunA17_Chr4g0003151 23.752 661 425 20 39 644 23 659 1.88e-43 166
Msa0619260 MtrunA17_Chr4g0052601 27.438 441 279 13 10 429 3 423 8.05e-42 157
Msa0619260 MtrunA17_Chr1g0192041 40.606 165 96 1 352 516 62 224 1.08e-36 137
Msa0619260 MtrunA17_Chr5g0408131 39.234 209 115 7 444 646 18 220 3.86e-30 119
Msa0619260 MtrunA17_Chr8g0383061 34.951 206 121 5 449 647 1 200 6.55e-28 112
Msa0619260 MtrunA17_Chr4g0052611 31.455 213 120 8 443 644 6 203 1.49e-21 94.7
Msa0619260 MtrunA17_Chr4g0062411 22.815 675 442 24 9 644 15 649 5.11e-21 97.8
Msa0619260 MtrunA17_Chr8g0383091 36.111 144 85 3 449 587 1 142 1.31e-18 83.2
Msa0619260 MtrunA17_Chr8g0390371 51.471 68 33 0 581 648 14 81 2.71e-18 80.1
Msa0619260 MtrunA17_Chr3g0108001 37.736 106 63 1 579 684 8 110 9.07e-17 76.6
Msa0619260 MtrunA17_Chr1g0162951 46.429 56 30 0 597 652 1 56 1.04e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619260 AT3G42170.1 26.597 673 407 22 23 645 40 675 1.35e-65 229
Msa0619260 AT3G42170.2 26.379 671 411 22 23 645 18 653 1.45e-65 229
Msa0619260 AT1G18560.1 19.535 645 440 19 38 644 46 649 5.21e-15 79.3

Find 118 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACAAATATTGAAAATTT+TGG 0.042677 4_2:-70364222 Msa0619260:three_prime_UTR
TTGTTGAGTGGGATGAATTT+AGG 0.159892 4_2:-70366564 Msa0619260:CDS
TGTGGGAAACAGTTTATTTC+TGG 0.178494 4_2:-70366745 Msa0619260:CDS
CTCATTAAAAGAAGCAAATT+TGG 0.195198 4_2:+70366534 None:intergenic
TGCTCTCATAATTGGTTATT+TGG 0.200558 4_2:-70364942 Msa0619260:CDS
TGCTCGTGTCTTGGACCTTA+TGG 0.214270 4_2:-70366065 Msa0619260:CDS
ATGTAAATGCTTTACAATAT+TGG 0.232405 4_2:-70365127 Msa0619260:CDS
CTCTCGTATGCTCTCATAAT+TGG 0.250561 4_2:-70364950 Msa0619260:CDS
TATGGATGATCAATGGAATT+TGG 0.253112 4_2:-70366338 Msa0619260:CDS
TCTGATGCTACTGCGATTAA+TGG 0.259960 4_2:+70365044 None:intergenic
CACCAAATAAGAAGCTTAAA+AGG 0.263653 4_2:-70366834 Msa0619260:CDS
CAAATATCATTTCTCATTAT+AGG 0.278019 4_2:+70364613 None:intergenic
TTCCTCCCAAAGGCTAGATA+TGG 0.279973 4_2:-70364309 Msa0619260:three_prime_UTR
TATGGTTGAAGGGAGTTTAA+AGG 0.289981 4_2:-70366047 Msa0619260:CDS
CATATCAACACAGATCAATT+TGG 0.290598 4_2:-70364814 Msa0619260:intron
TGTTGAGTGGGATGAATTTA+GGG 0.292056 4_2:-70366563 Msa0619260:CDS
AAAACAGCTGGCTGCAGTTA+AGG 0.299415 4_2:-70366437 Msa0619260:CDS
ATACAGTTGCCAGGACTAAA+AGG 0.305618 4_2:+70365017 None:intergenic
AGCTTAAAAGGTTTAATGTT+TGG 0.315159 4_2:-70366822 Msa0619260:CDS
TATAGCATGATTCTTGCTTT+TGG 0.324684 4_2:-70365557 Msa0619260:CDS
ATACAAAATCCTAGAACTTC+TGG 0.325311 4_2:+70364346 None:intergenic
TTATTTGGCTTCTCACCTAT+TGG 0.325496 4_2:-70364927 Msa0619260:intron
ATGTGGATGTGTCCGGTAAA+TGG 0.329056 4_2:-70365898 Msa0619260:CDS
ACATGGATTCCAGAAGTTCT+AGG 0.339938 4_2:-70364355 Msa0619260:three_prime_UTR
TCCTCTTTCCCACTCTTCAC+TGG 0.340787 4_2:+70365781 None:intergenic
TTTCATAATCAAAGGACATT+TGG 0.349734 4_2:+70366687 None:intergenic
CTTCACCCATATCTAGCCTT+TGG 0.354398 4_2:+70364303 None:intergenic
GATTGGAAGGACAACTGATT+TGG 0.358586 4_2:-70364695 Msa0619260:three_prime_UTR
GAAGGTGATTGATTGTTTGC+AGG 0.362557 4_2:-70366254 Msa0619260:CDS
TTCACCCATATCTAGCCTTT+GGG 0.379745 4_2:+70364304 None:intergenic
TGTGTTTGAGCTTTCATTGT+TGG 0.387670 4_2:-70366408 Msa0619260:CDS
GTCACAAAAGTTGTCTCAAA+TGG 0.393919 4_2:-70364454 Msa0619260:three_prime_UTR
ATAATCTTCAATAAAATTTG+AGG 0.395145 4_2:+70368950 None:intergenic
GTCTTGGACCTTATGGTTGA+AGG 0.395307 4_2:-70366058 Msa0619260:CDS
TGAAATTGATGCAACTTTGT+TGG 0.402252 4_2:+70365400 None:intergenic
AGAAGTTGTCACAAATTAGT+TGG 0.404754 4_2:+70364589 None:intergenic
TCATAGGATGGTTCGTGATT+CGG 0.405498 4_2:-70366626 Msa0619260:CDS
TCCCACTCAACAAACTGAAA+TGG 0.408842 4_2:+70366574 None:intergenic
AAAACTGAAGATTCATAGAT+TGG 0.409089 4_2:-70364712 Msa0619260:exon
AAAGGTAGTAAGTGGTGTAT+TGG 0.412099 4_2:-70366029 Msa0619260:CDS
ATAAAATTTGAGGTGAAGAA+AGG 0.417151 4_2:+70368960 None:intergenic
TTTGTTTGCTTGGATCATTT+AGG 0.417252 4_2:+70364237 None:intergenic
TCCATTTCAGTTTGTTGAGT+GGG 0.419318 4_2:-70366575 Msa0619260:CDS
CTTTCCCACTCTTCACTGGA+TGG 0.428816 4_2:+70365785 None:intergenic
ATAAGTAGAAACCCATTTAC+CGG 0.433597 4_2:+70365886 None:intergenic
TCCTCCCAAAGGCTAGATAT+GGG 0.435705 4_2:-70364308 Msa0619260:three_prime_UTR
AAACAGCTGGCTGCAGTTAA+GGG 0.437970 4_2:-70366436 Msa0619260:CDS
CAGTTTATTTCTGGAAGGAC+AGG 0.438009 4_2:-70366736 Msa0619260:CDS
GTCATAGGAATATGTTGAAA+AGG 0.438311 4_2:-70365222 Msa0619260:intron
ACTTCTTCCGCTTCTTCTCA+TGG 0.439368 4_2:-70366385 Msa0619260:CDS
CTGATGCTACTGCGATTAAT+GGG 0.442867 4_2:+70365045 None:intergenic
TGATTGATTGTTTGCAGGAA+TGG 0.447807 4_2:-70366249 Msa0619260:CDS
CGGTTGTATTTGATCAAACA+TGG 0.448282 4_2:-70364372 Msa0619260:three_prime_UTR
GATTGATTGTTTGCAGGAAT+GGG 0.451798 4_2:-70366248 Msa0619260:CDS
AAGGAAGACAGACTTGCTTT+CGG 0.459823 4_2:-70365336 Msa0619260:CDS
GAAAGTTTACTTGCTTGAAA+AGG 0.460044 4_2:-70366470 Msa0619260:CDS
CACAGTAGAAGGATAAAATC+AGG 0.460675 4_2:+70364154 None:intergenic
TCTAAATAAGTATGCAATGT+AGG 0.460686 4_2:+70365692 None:intergenic
CAATGTGTTGAAGAAGTTGA+TGG 0.462685 4_2:-70365944 Msa0619260:CDS
TTCAATTAGATTACCTGTGA+GGG 0.465347 4_2:-70365381 Msa0619260:CDS
TTAAACTCCCTTCAACCATA+AGG 0.473406 4_2:+70366050 None:intergenic
TTTGTTAAAATTGAAGCAGA+TGG 0.474429 4_2:-70366793 Msa0619260:CDS
TAAAATTTGAGGTGAAGAAA+GGG 0.476929 4_2:+70368961 None:intergenic
AGATGACAAGATAAGAGATA+TGG 0.477086 4_2:-70365621 Msa0619260:CDS
TCCAGTGAAGAGTGGGAAAG+AGG 0.481839 4_2:-70365782 Msa0619260:CDS
TGTGGATGTGTCCGGTAAAT+GGG 0.486423 4_2:-70365897 Msa0619260:CDS
ATATCCTTGCAAGGTTGGCT+AGG 0.487414 4_2:-70365082 Msa0619260:CDS
TAAGTGTTGTGCTCGTGTCT+TGG 0.489616 4_2:-70366074 Msa0619260:CDS
TTTCCCACTCTTCACTGGAT+GGG 0.492201 4_2:+70365786 None:intergenic
GTATTATATCCTTGCAAGGT+TGG 0.493126 4_2:-70365087 Msa0619260:CDS
AAGGACATTTGGTAATATGT+TGG 0.494056 4_2:+70366698 None:intergenic
TCAATTTGGAGACGAGATTG+AGG 0.505434 4_2:-70364800 Msa0619260:CDS
GTGTTTATAATCTTCAGATA+CGG 0.509684 4_2:-70364392 Msa0619260:three_prime_UTR
TGTGTGAATGTAAAACTTGT+GGG 0.519867 4_2:-70366762 Msa0619260:CDS
TATCCTTGCAAGGTTGGCTA+GGG 0.521039 4_2:-70365081 Msa0619260:CDS
GGAAGGACAACTGATTTGGT+TGG 0.526669 4_2:-70364691 Msa0619260:three_prime_UTR
ATTTAAACCCATGTGTTCAA+AGG 0.528848 4_2:+70365829 None:intergenic
GAGAGGCTAGAAAGATATGC+AGG 0.531332 4_2:-70365200 Msa0619260:CDS
CTCGACATATAATATGTAGT+TGG 0.533284 4_2:-70364414 Msa0619260:three_prime_UTR
CTGAAGATTCATAGATTGGA+AGG 0.533653 4_2:-70364708 Msa0619260:exon
GGGAGTTTAAAGGTAGTAAG+TGG 0.535397 4_2:-70366037 Msa0619260:CDS
CATCCCTAGCCAACCTTGCA+AGG 0.536180 4_2:+70365078 None:intergenic
AGTAGATTCAGAAATTATGT+TGG 0.537129 4_2:+70365718 None:intergenic
TTCCATTTCAGTTTGTTGAG+TGG 0.541712 4_2:-70366576 Msa0619260:CDS
TGCAGACTTGTTACTTGATG+TGG 0.542960 4_2:-70364656 Msa0619260:three_prime_UTR
TTGTTCAAAATACAGTTGCC+AGG 0.545172 4_2:+70365008 None:intergenic
AGCTCAAAACTATCATGTGA+AGG 0.546391 4_2:+70366283 None:intergenic
TCGCAGTGCCTTTGAACACA+TGG 0.551660 4_2:-70365837 Msa0619260:CDS
GGAAACAGTTTATTTCTGGA+AGG 0.552696 4_2:-70366741 Msa0619260:CDS
GTGGTGTATTGGACAAGATA+AGG 0.558276 4_2:-70366018 Msa0619260:CDS
TCTTGGACCTTATGGTTGAA+GGG 0.561197 4_2:-70366057 Msa0619260:CDS
GGCTTGCATGTGGATGTGTC+CGG 0.562567 4_2:-70365905 Msa0619260:CDS
ATACGAGATTTCATAATCAA+AGG 0.562920 4_2:+70366679 None:intergenic
AAGAGTATTATATCCTTGCA+AGG 0.570372 4_2:-70365091 Msa0619260:CDS
CGCAGTGCCTTTGAACACAT+GGG 0.570409 4_2:-70365836 Msa0619260:CDS
AATATAACCATGAGAAGAAG+CGG 0.571617 4_2:+70366378 None:intergenic
TATTGGTGAGAGCTGTAACT+CGG 0.573522 4_2:-70366881 Msa0619260:CDS
TACAGAGACAGTAAAAGATA+AGG 0.576841 4_2:-70365468 Msa0619260:CDS
ATGTGTGAATGTAAAACTTG+TGG 0.579067 4_2:-70366763 Msa0619260:CDS
AGGAATATGTTGAAAAGGAG+AGG 0.590759 4_2:-70365217 Msa0619260:CDS
ATTGATTGTTTGCAGGAATG+GGG 0.593807 4_2:-70366247 Msa0619260:CDS
TTGCCCATCCAGTGAAGAGT+GGG 0.595769 4_2:-70365789 Msa0619260:CDS
TGTAACTCGGCATATTCTGA+TGG 0.599813 4_2:-70366868 Msa0619260:CDS
ACCCATATCTAGCCTTTGGG+AGG 0.604439 4_2:+70364307 None:intergenic
TTTCAATTAGATTACCTGTG+AGG 0.604805 4_2:-70365382 Msa0619260:CDS
TATTTGAAAGAGAGAGACAG+AGG 0.606953 4_2:-70365155 Msa0619260:CDS
ATGTGAGTGTGTCAAACTCT+AGG 0.607095 4_2:-70365982 Msa0619260:CDS
GATGGCAGTGATAGCAGCGA+TGG 0.612489 4_2:-70365926 Msa0619260:CDS
GCTCAAAACTATCATGTGAA+GGG 0.613016 4_2:+70366284 None:intergenic
ATTGCCCATCCAGTGAAGAG+TGG 0.614031 4_2:-70365790 Msa0619260:CDS
GTAAAACGAGAATCCCTCAC+AGG 0.619596 4_2:+70365368 None:intergenic
TTGGATCATTTAGGCACACA+AGG 0.619815 4_2:+70364246 None:intergenic
ATTATCAGTCTTATAATACA+AGG 0.628228 4_2:-70368932 Msa0619260:intron
CAGCTGGCTGCAGTTAAGGG+TGG 0.640291 4_2:-70366433 Msa0619260:CDS
AAGATAAGGTGAGCAATGTG+AGG 0.641913 4_2:-70365454 Msa0619260:CDS
TAGCAGCGATGGCTTGCATG+TGG 0.661586 4_2:-70365915 Msa0619260:CDS
AAAGATTCGAACTTCAAACG+AGG 0.704807 4_2:+70365521 None:intergenic
AGGCTAGAAAGATATGCAGG+TGG 0.719348 4_2:-70365197 Msa0619260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTGTTATTTATTTTG+CGG - chr4_2:70365566-70365585 Msa0619260:CDS 10.0%
!!! TTTTTTTTTTTTTTTCAGTA+TGG - chr4_2:70366217-70366236 Msa0619260:CDS 10.0%
!!! AAACAAATATTGAAAATTTT+GGG - chr4_2:70368904-70368923 Msa0619260:intron 10.0%
!! ATAATCTTCAATAAAATTTG+AGG + chr4_2:70364178-70364197 None:intergenic 15.0%
!! TGTAATAAAAATAAAATACG+AGG - chr4_2:70364717-70364736 Msa0619260:CDS 15.0%
!! TGTAAAAAGTTAATACAAAA+AGG - chr4_2:70365349-70365368 Msa0619260:CDS 15.0%
!! GTAAAAAGTTAATACAAAAA+GGG - chr4_2:70365350-70365369 Msa0619260:CDS 15.0%
!!! AATAATGAAAACAATTCTTT+TGG - chr4_2:70366039-70366058 Msa0619260:CDS 15.0%
!!! AAATGTTTTTTCTATTACTA+TGG - chr4_2:70366910-70366929 Msa0619260:intron 15.0%
!!! CAAACAAATATTGAAAATTT+TGG - chr4_2:70368903-70368922 Msa0619260:intron 15.0%
!!! ATTATCAGTCTTATAATACA+AGG - chr4_2:70364193-70364212 Msa0619260:three_prime_UTR 20.0%
!!! TTGATTCATTCATTTTTTAG+AGG - chr4_2:70364374-70364393 Msa0619260:three_prime_UTR 20.0%
!!! GAAAATCAATCTTATTTACA+TGG + chr4_2:70364516-70364535 None:intergenic 20.0%
!! TAGTTCTCTCAAAAAAAAAA+AGG - chr4_2:70364647-70364666 Msa0619260:three_prime_UTR 20.0%
!!! TATATGTCTAGATTTTGAAA+GGG + chr4_2:70365101-70365120 None:intergenic 20.0%
!!! TATATTTTGACAAGTAAAGT+GGG + chr4_2:70365890-70365909 None:intergenic 20.0%
!!! ATATATTTTGACAAGTAAAG+TGG + chr4_2:70365891-70365910 None:intergenic 20.0%
!!! TTTTTCAGTATGGATTTTAT+TGG - chr4_2:70366227-70366246 Msa0619260:CDS 20.0%
!!! TTAAAATGTTTTTCTAGAGA+TGG + chr4_2:70367034-70367053 None:intergenic 20.0%
!!! CTTATTTAGATCATATTTTG+CGG - chr4_2:70367446-70367465 Msa0619260:intron 20.0%
!!! TCTTTGATTTAAATTGTCAT+AGG - chr4_2:70367888-70367907 Msa0619260:intron 20.0%
!! ATGTAAATGCTTTACAATAT+TGG - chr4_2:70367998-70368017 Msa0619260:intron 20.0%
!! CAAATATCATTTCTCATTAT+AGG + chr4_2:70368515-70368534 None:intergenic 20.0%
!!! ATTTTCAATATTTGTTTGCT+TGG + chr4_2:70368901-70368920 None:intergenic 20.0%
!! TAAAATTTGAGGTGAAGAAA+GGG + chr4_2:70364167-70364186 None:intergenic 25.0%
!! ATAAAATTTGAGGTGAAGAA+AGG + chr4_2:70364168-70364187 None:intergenic 25.0%
! TGTTTGAAGATCTTTGAATT+TGG - chr4_2:70364293-70364312 Msa0619260:three_prime_UTR 25.0%
! GTAGTTGCATAAACAAATAA+TGG - chr4_2:70364572-70364591 Msa0619260:three_prime_UTR 25.0%
!! GTGTTTAAGGACATTTTTAA+AGG - chr4_2:70364866-70364885 Msa0619260:intron 25.0%
!! AACAAATGTGTTTGAGATAT+TGG + chr4_2:70365002-70365021 None:intergenic 25.0%
!! CTATATGTCTAGATTTTGAA+AGG + chr4_2:70365102-70365121 None:intergenic 25.0%
! ACAATAAACTCCAAATTAAG+TGG + chr4_2:70365130-70365149 None:intergenic 25.0%
! AACTATCAATCAAATACCAA+CGG + chr4_2:70365603-70365622 None:intergenic 25.0%
!! AACCTTTTAAGCTTCTTATT+TGG + chr4_2:70366296-70366315 None:intergenic 25.0%
! AGCTTAAAAGGTTTAATGTT+TGG - chr4_2:70366303-70366322 Msa0619260:CDS 25.0%
! TTTGTTAAAATTGAAGCAGA+TGG - chr4_2:70366332-70366351 Msa0619260:CDS 25.0%
! TTTCATAATCAAAGGACATT+TGG + chr4_2:70366441-70366460 None:intergenic 25.0%
! ATACGAGATTTCATAATCAA+AGG + chr4_2:70366449-70366468 None:intergenic 25.0%
! ACCTCAAAAAAATTGATCAT+AGG - chr4_2:70366483-70366502 Msa0619260:CDS 25.0%
!!! TCCTATGATCAATTTTTTTG+AGG + chr4_2:70366487-70366506 None:intergenic 25.0%
! CAAAAAAATTGATCATAGGA+TGG - chr4_2:70366487-70366506 Msa0619260:CDS 25.0%
! CTCATTAAAAGAAGCAAATT+TGG + chr4_2:70366594-70366613 None:intergenic 25.0%
!!! CAAATTTGCTTCTTTTAATG+AGG - chr4_2:70366592-70366611 Msa0619260:CDS 25.0%
!! TACTTTAACAGCTCATTTTA+TGG - chr4_2:70366769-70366788 Msa0619260:CDS 25.0%
! AGTAGATTCAGAAATTATGT+TGG + chr4_2:70367410-70367429 None:intergenic 25.0%
! TCTAAATAAGTATGCAATGT+AGG + chr4_2:70367436-70367455 None:intergenic 25.0%
! AAGTATCTGTACGAAAAATT+AGG - chr4_2:70367628-70367647 Msa0619260:intron 25.0%
! TTGCGATAAAATTTACCAAT+AGG + chr4_2:70368216-70368235 None:intergenic 25.0%
!!! AATCTTCAGTTTTGTTTTCA+TGG + chr4_2:70368406-70368425 None:intergenic 25.0%
! AAAACTGAAGATTCATAGAT+TGG - chr4_2:70368413-70368432 Msa0619260:intron 25.0%
! GTGTTTATAATCTTCAGATA+CGG - chr4_2:70368733-70368752 Msa0619260:intron 25.0%
ATGCAGACAAAGAAAATCAA+AGG + chr4_2:70364227-70364246 None:intergenic 30.0%
TTCAGCTAGAACATAGTATT+CGG - chr4_2:70364263-70364282 Msa0619260:three_prime_UTR 30.0%
! AGATCTTTGAATTTGGTAAC+TGG - chr4_2:70364300-70364319 Msa0619260:three_prime_UTR 30.0%
GAACTACTTATTCAAAGCTT+GGG - chr4_2:70364415-70364434 Msa0619260:three_prime_UTR 30.0%
AACTACTTATTCAAAGCTTG+GGG - chr4_2:70364416-70364435 Msa0619260:three_prime_UTR 30.0%
GGGAGAATATAAATGATACA+TGG - chr4_2:70364436-70364455 Msa0619260:three_prime_UTR 30.0%
!! GAATCATCGTTTAATTTGCA+TGG - chr4_2:70364594-70364613 Msa0619260:three_prime_UTR 30.0%
! ATTGGTTCAACAATCAAAAG+AGG + chr4_2:70364984-70365003 None:intergenic 30.0%
! CAAGAGTATGAATTCAAAGA+AGG + chr4_2:70365051-70365070 None:intergenic 30.0%
TATAGTTCCACCACTTAATT+TGG - chr4_2:70365117-70365136 Msa0619260:CDS 30.0%
ATAAACTCCAAATTAAGTGG+TGG + chr4_2:70365127-70365146 None:intergenic 30.0%
!!! CTAGTTTTTAGTTTACTAGG+AGG + chr4_2:70365199-70365218 None:intergenic 30.0%
!!! GCTCTAGTTTTTAGTTTACT+AGG + chr4_2:70365202-70365221 None:intergenic 30.0%
CCGAACAAAACAAAAAAAGT+GGG + chr4_2:70365678-70365697 None:intergenic 30.0%
!!! CCCACTTTTTTTGTTTTGTT+CGG - chr4_2:70365675-70365694 Msa0619260:CDS 30.0%
!!! CCACTTTTTTTGTTTTGTTC+GGG - chr4_2:70365676-70365695 Msa0619260:CDS 30.0%
TCATGTGAATGGATAAAATC+CGG + chr4_2:70365790-70365809 None:intergenic 30.0%
AATCAAACCACATGCTTAAA+AGG - chr4_2:70365816-70365835 Msa0619260:CDS 30.0%
ATCAAACCACATGCTTAAAA+GGG - chr4_2:70365817-70365836 Msa0619260:CDS 30.0%
AGCAAGTAAAATTAATCCTC+AGG - chr4_2:70366105-70366124 Msa0619260:CDS 30.0%
GCAAGTAAAATTAATCCTCA+GGG - chr4_2:70366106-70366125 Msa0619260:CDS 30.0%
!! CTTTTAAGCTTCTTATTTGG+TGG + chr4_2:70366293-70366312 None:intergenic 30.0%
CACCAAATAAGAAGCTTAAA+AGG - chr4_2:70366291-70366310 Msa0619260:CDS 30.0%
ATGTGTGAATGTAAAACTTG+TGG - chr4_2:70366362-70366381 Msa0619260:CDS 30.0%
TGTGTGAATGTAAAACTTGT+GGG - chr4_2:70366363-70366382 Msa0619260:CDS 30.0%
! AAGGACATTTGGTAATATGT+TGG + chr4_2:70366430-70366449 None:intergenic 30.0%
!!! TTTTTTGAGGTTGAAATGCT+TGG + chr4_2:70366474-70366493 None:intergenic 30.0%
GAAAGTTTACTTGCTTGAAA+AGG - chr4_2:70366655-70366674 Msa0619260:CDS 30.0%
GGATAAATTGAAAAAACAGC+TGG - chr4_2:70366676-70366695 Msa0619260:CDS 30.0%
AATATAACCATGAGAAGAAG+CGG + chr4_2:70366750-70366769 None:intergenic 30.0%
! CTCATTTTATGGATGATCAA+TGG - chr4_2:70366780-70366799 Msa0619260:CDS 30.0%
TATGGATGATCAATGGAATT+TGG - chr4_2:70366787-70366806 Msa0619260:CDS 30.0%
!!! ATGATAGTTTTGAGCTATCA+AGG - chr4_2:70366849-70366868 Msa0619260:CDS 30.0%
!!! TTGATTTTTCAAGTTTTGCG+AGG + chr4_2:70366960-70366979 None:intergenic 30.0%
ATAAGTAGAAACCCATTTAC+CGG + chr4_2:70367242-70367261 None:intergenic 30.0%
ATTTAAACCCATGTGTTCAA+AGG + chr4_2:70367299-70367318 None:intergenic 30.0%
AGATGACAAGATAAGAGATA+TGG - chr4_2:70367504-70367523 Msa0619260:intron 30.0%
! TATAGCATGATTCTTGCTTT+TGG - chr4_2:70367568-70367587 Msa0619260:intron 30.0%
TACAGAGACAGTAAAAGATA+AGG - chr4_2:70367657-70367676 Msa0619260:intron 30.0%
TGAAATTGATGCAACTTTGT+TGG + chr4_2:70367728-70367747 None:intergenic 30.0%
TTTCAATTAGATTACCTGTG+AGG - chr4_2:70367743-70367762 Msa0619260:intron 30.0%
TTCAATTAGATTACCTGTGA+GGG - chr4_2:70367744-70367763 Msa0619260:intron 30.0%
GTCATAGGAATATGTTGAAA+AGG - chr4_2:70367903-70367922 Msa0619260:intron 30.0%
!! AAGAGTATTATATCCTTGCA+AGG - chr4_2:70368034-70368053 Msa0619260:intron 30.0%
TGCTCTCATAATTGGTTATT+TGG - chr4_2:70368183-70368202 Msa0619260:intron 30.0%
CATATCAACACAGATCAATT+TGG - chr4_2:70368311-70368330 Msa0619260:intron 30.0%
ATTGAGGAGACAAGAAAAAT+TGG - chr4_2:70368341-70368360 Msa0619260:intron 30.0%
AGAAGTTGTCACAAATTAGT+TGG + chr4_2:70368539-70368558 None:intergenic 30.0%
GAGAAAAAAAAAGGAAGAGA+GGG + chr4_2:70368601-70368620 None:intergenic 30.0%
AGAGAAAAAAAAAGGAAGAG+AGG + chr4_2:70368602-70368621 None:intergenic 30.0%
AGAGAGAGAGAGAAAAAAAA+AGG + chr4_2:70368610-70368629 None:intergenic 30.0%
CTCGACATATAATATGTAGT+TGG - chr4_2:70368711-70368730 Msa0619260:intron 30.0%
ATACAAAATCCTAGAACTTC+TGG + chr4_2:70368782-70368801 None:intergenic 30.0%
!!! AGAAGTTCTAGGATTTTGTA+TGG - chr4_2:70368781-70368800 Msa0619260:intron 30.0%
!!! GAAGTTCTAGGATTTTGTAT+GGG - chr4_2:70368782-70368801 Msa0619260:intron 30.0%
! TTTTTCTTTTTTCCTCCCAA+AGG - chr4_2:70368806-70368825 Msa0619260:intron 30.0%
TTTGTTTGCTTGGATCATTT+AGG + chr4_2:70368891-70368910 None:intergenic 30.0%
!!! TGAAAATTTTGGGACATACT+AGG - chr4_2:70368914-70368933 Msa0619260:intron 30.0%
!!! GAAAATTTTGGGACATACTA+GGG - chr4_2:70368915-70368934 Msa0619260:intron 30.0%
! AGCTGAAGTATTCATTTCTC+AGG + chr4_2:70364250-70364269 None:intergenic 35.0%
TACACTGATGTATTCTTGCA+TGG - chr4_2:70364333-70364352 Msa0619260:three_prime_UTR 35.0%
!!! TTTTTAGAGGCATTCTCTGT+TGG - chr4_2:70364387-70364406 Msa0619260:three_prime_UTR 35.0%
GGAACTACTTATTCAAAGCT+TGG - chr4_2:70364414-70364433 Msa0619260:three_prime_UTR 35.0%
! GGTATTGTTGACATTTTCAG+TGG + chr4_2:70364495-70364514 None:intergenic 35.0%
! CCTATGGTCAATTTAAGACA+TGG + chr4_2:70364538-70364557 None:intergenic 35.0%
CCATGTCTTAAATTGACCAT+AGG - chr4_2:70364535-70364554 Msa0619260:three_prime_UTR 35.0%
TTTATGCAACTACCGACAAA+AGG + chr4_2:70364565-70364584 None:intergenic 35.0%
!! TAATTTGCATGGCAGGTTTT+TGG - chr4_2:70364605-70364624 Msa0619260:three_prime_UTR 35.0%
TTATTACAAGCACGTTTCTC+AGG + chr4_2:70364705-70364724 None:intergenic 35.0%
! GTCTGACATCAACGTTTTAA+AGG - chr4_2:70364831-70364850 Msa0619260:intron 35.0%
!! GTTTTGTTGACGAGTGTTTA+AGG - chr4_2:70364853-70364872 Msa0619260:intron 35.0%
! CATACTCTTGAGTGTACTTT+TGG - chr4_2:70365061-70365080 Msa0619260:CDS 35.0%
TATTTCTTAGTTACTGCACG+TGG + chr4_2:70365323-70365342 None:intergenic 35.0%
CGTGCAGTAACTAAGAAATA+TGG - chr4_2:70365323-70365342 Msa0619260:intron 35.0%
GCAGTAACTAAGAAATATGG+AGG - chr4_2:70365326-70365345 Msa0619260:intron 35.0%
TAGAAAGAAAGATGAAACCG+TGG - chr4_2:70365419-70365438 Msa0619260:CDS 35.0%
TTGTTTGTTTACAGCAACCA+CGG + chr4_2:70365439-70365458 None:intergenic 35.0%
TTCAAGCAACTAATCGCAAT+CGG + chr4_2:70365640-70365659 None:intergenic 35.0%
CCCGAACAAAACAAAAAAAG+TGG + chr4_2:70365679-70365698 None:intergenic 35.0%
AGAGATTATTCACTGCTAAG+CGG + chr4_2:70365732-70365751 None:intergenic 35.0%
TAGCAGTGAATAATCTCTGT+CGG - chr4_2:70365734-70365753 Msa0619260:CDS 35.0%
TAAGCATGTGGTTTGATTCT+TGG + chr4_2:70365814-70365833 None:intergenic 35.0%
!! AACAATGGATTAGTCCAAAG+TGG + chr4_2:70365856-70365875 None:intergenic 35.0%
ACTTTGGACTAATCCATTGT+TGG - chr4_2:70365855-70365874 Msa0619260:CDS 35.0%
TCTTCTTCTCTACATCACAA+CGG + chr4_2:70365985-70366004 None:intergenic 35.0%
AGAAGATGAAATGTTAGCTG+AGG - chr4_2:70365999-70366018 Msa0619260:CDS 35.0%
GAAGATGAAATGTTAGCTGA+GGG - chr4_2:70366000-70366019 Msa0619260:CDS 35.0%
GCTATACACGATAATGAGTT+TGG - chr4_2:70366147-70366166 Msa0619260:CDS 35.0%
! ACGATAATGAGTTTGGAATG+TGG - chr4_2:70366154-70366173 Msa0619260:CDS 35.0%
TGTGGGAAACAGTTTATTTC+TGG - chr4_2:70366380-70366399 Msa0619260:CDS 35.0%
!! GGAAACAGTTTATTTCTGGA+AGG - chr4_2:70366384-70366403 Msa0619260:CDS 35.0%
!! TTCCATTTCAGTTTGTTGAG+TGG - chr4_2:70366549-70366568 Msa0619260:CDS 35.0%
!! TCCATTTCAGTTTGTTGAGT+GGG - chr4_2:70366550-70366569 Msa0619260:CDS 35.0%
TTGTTGAGTGGGATGAATTT+AGG - chr4_2:70366561-70366580 Msa0619260:CDS 35.0%
TGTTGAGTGGGATGAATTTA+GGG - chr4_2:70366562-70366581 Msa0619260:CDS 35.0%
TGTGTTTGAGCTTTCATTGT+TGG - chr4_2:70366717-70366736 Msa0619260:CDS 35.0%
GCTCAAAACTATCATGTGAA+GGG + chr4_2:70366844-70366863 None:intergenic 35.0%
AGCTCAAAACTATCATGTGA+AGG + chr4_2:70366845-70366864 None:intergenic 35.0%
!!! TAGTTTTGAGCTATCAAGGA+AGG - chr4_2:70366853-70366872 Msa0619260:CDS 35.0%
TGATTGATTGTTTGCAGGAA+TGG - chr4_2:70366876-70366895 Msa0619260:CDS 35.0%
GATTGATTGTTTGCAGGAAT+GGG - chr4_2:70366877-70366896 Msa0619260:CDS 35.0%
ATTGATTGTTTGCAGGAATG+GGG - chr4_2:70366878-70366897 Msa0619260:CDS 35.0%
TTAAACTCCCTTCAACCATA+AGG + chr4_2:70367078-70367097 None:intergenic 35.0%
TATGGTTGAAGGGAGTTTAA+AGG - chr4_2:70367078-70367097 Msa0619260:intron 35.0%
AAAGGTAGTAAGTGGTGTAT+TGG - chr4_2:70367096-70367115 Msa0619260:intron 35.0%
CAATGTGTTGAAGAAGTTGA+TGG - chr4_2:70367181-70367200 Msa0619260:intron 35.0%
AAAGATTCGAACTTCAAACG+AGG + chr4_2:70367607-70367626 None:intergenic 35.0%
AGGAATATGTTGAAAAGGAG+AGG - chr4_2:70367908-70367927 Msa0619260:intron 35.0%
TATTTGAAAGAGAGAGACAG+AGG - chr4_2:70367970-70367989 Msa0619260:intron 35.0%
GTATTATATCCTTGCAAGGT+TGG - chr4_2:70368038-70368057 Msa0619260:intron 35.0%
TTGTTCAAAATACAGTTGCC+AGG + chr4_2:70368120-70368139 None:intergenic 35.0%
! TTATTTGGCTTCTCACCTAT+TGG - chr4_2:70368198-70368217 Msa0619260:intron 35.0%
CTGAAGATTCATAGATTGGA+AGG - chr4_2:70368417-70368436 Msa0619260:intron 35.0%
GTCACAAAAGTTGTCTCAAA+TGG - chr4_2:70368671-70368690 Msa0619260:intron 35.0%
CGGTTGTATTTGATCAAACA+TGG - chr4_2:70368753-70368772 Msa0619260:intron 35.0%
! TTGTTGACATTTTCAGTGGC+AGG + chr4_2:70364491-70364510 None:intergenic 40.0%
! ACCATAGGAACACCTTTTGT+CGG - chr4_2:70364550-70364569 Msa0619260:three_prime_UTR 40.0%
!! CATCGTTTAATTTGCATGGC+AGG - chr4_2:70364598-70364617 Msa0619260:three_prime_UTR 40.0%
CGTTGATGTCAGACATTTGA+AGG + chr4_2:70364825-70364844 None:intergenic 40.0%
TGAGAGAAGCAGTGAAAATG+AGG + chr4_2:70365469-70365488 None:intergenic 40.0%
TTGTTCGGGTCACATGATAT+TGG - chr4_2:70365690-70365709 Msa0619260:CDS 40.0%
AATCTCTGTCGGAGAATACA+TGG - chr4_2:70365745-70365764 Msa0619260:CDS 40.0%
ATCTCTGTCGGAGAATACAT+GGG - chr4_2:70365746-70365765 Msa0619260:CDS 40.0%
TGATTCTTGGCTCATGTGAA+TGG + chr4_2:70365801-70365820 None:intergenic 40.0%
! TTTGGACCCTTTTAAGCATG+TGG + chr4_2:70365826-70365845 None:intergenic 40.0%
!! GGATTAGTCCAAAGTGGTAA+GGG + chr4_2:70365850-70365869 None:intergenic 40.0%
!! TGGATTAGTCCAAAGTGGTA+AGG + chr4_2:70365851-70365870 None:intergenic 40.0%
ATACAAAAACGACAACCCTG+AGG + chr4_2:70366124-70366143 None:intergenic 40.0%
TATTGGTGAGAGCTGTAACT+CGG - chr4_2:70366244-70366263 Msa0619260:CDS 40.0%
TGTAACTCGGCATATTCTGA+TGG - chr4_2:70366257-70366276 Msa0619260:CDS 40.0%
!! CAGTTTATTTCTGGAAGGAC+AGG - chr4_2:70366389-70366408 Msa0619260:CDS 40.0%
TCATAGGATGGTTCGTGATT+CGG - chr4_2:70366499-70366518 Msa0619260:CDS 40.0%
TCCCACTCAACAAACTGAAA+TGG + chr4_2:70366554-70366573 None:intergenic 40.0%
GAAGGTGATTGATTGTTTGC+AGG - chr4_2:70366871-70366890 Msa0619260:CDS 40.0%
TCTTGGACCTTATGGTTGAA+GGG - chr4_2:70367068-70367087 Msa0619260:intron 40.0%
GGGAGTTTAAAGGTAGTAAG+TGG - chr4_2:70367088-70367107 Msa0619260:intron 40.0%
GTGGTGTATTGGACAAGATA+AGG - chr4_2:70367107-70367126 Msa0619260:intron 40.0%
ATGTGAGTGTGTCAAACTCT+AGG - chr4_2:70367143-70367162 Msa0619260:intron 40.0%
AAGATAAGGTGAGCAATGTG+AGG - chr4_2:70367671-70367690 Msa0619260:intron 40.0%
! GGGATTCTCGTTTTACTTCT+CGG - chr4_2:70367764-70367783 Msa0619260:intron 40.0%
! GGATTCTCGTTTTACTTCTC+GGG - chr4_2:70367765-70367784 Msa0619260:intron 40.0%
! AAGGAAGACAGACTTGCTTT+CGG - chr4_2:70367789-70367808 Msa0619260:intron 40.0%
CTGATGCTACTGCGATTAAT+GGG + chr4_2:70368083-70368102 None:intergenic 40.0%
TCTGATGCTACTGCGATTAA+TGG + chr4_2:70368084-70368103 None:intergenic 40.0%
! TCAGAATCTCCTTTTAGTCC+TGG - chr4_2:70368099-70368118 Msa0619260:intron 40.0%
ATACAGTTGCCAGGACTAAA+AGG + chr4_2:70368111-70368130 None:intergenic 40.0%
CTCTCGTATGCTCTCATAAT+TGG - chr4_2:70368175-70368194 Msa0619260:intron 40.0%
TCAATTTGGAGACGAGATTG+AGG - chr4_2:70368325-70368344 Msa0619260:intron 40.0%
GATTGGAAGGACAACTGATT+TGG - chr4_2:70368430-70368449 Msa0619260:intron 40.0%
!! TGCAGACTTGTTACTTGATG+TGG - chr4_2:70368469-70368488 Msa0619260:intron 40.0%
!!! GTGGCTACTGATTTTCTGTT+TGG - chr4_2:70368488-70368507 Msa0619260:intron 40.0%
ACATGGATTCCAGAAGTTCT+AGG - chr4_2:70368770-70368789 Msa0619260:intron 40.0%
! TTCACCCATATCTAGCCTTT+GGG + chr4_2:70368824-70368843 None:intergenic 40.0%
TTGGATCATTTAGGCACACA+AGG + chr4_2:70368882-70368901 None:intergenic 40.0%
!! TTAGAGGCATTCTCTGTTGG+AGG - chr4_2:70364390-70364409 Msa0619260:three_prime_UTR 45.0%
! GACATTTTCAGTGGCAGGAA+AGG + chr4_2:70364486-70364505 None:intergenic 45.0%
!! ACCGACAAAAGGTGTTCCTA+TGG + chr4_2:70364554-70364573 None:intergenic 45.0%
!! ACGTTTCTCAGGTTGAAGCA+TGG + chr4_2:70364694-70364713 None:intergenic 45.0%
GAGAAGCAGTGAAAATGAGG+AGG + chr4_2:70365466-70365485 None:intergenic 45.0%
GATTATTCACTGCTAAGCGG+CGG + chr4_2:70365729-70365748 None:intergenic 45.0%
GAGAATACATGGGACACACA+AGG - chr4_2:70365756-70365775 Msa0619260:CDS 45.0%
AATACATGGGACACACAAGG+TGG - chr4_2:70365759-70365778 Msa0619260:CDS 45.0%
ATACATGGGACACACAAGGT+GGG - chr4_2:70365760-70365779 Msa0619260:CDS 45.0%
GTCCAAATCCCTTACCACTT+TGG - chr4_2:70365839-70365858 Msa0619260:CDS 45.0%
GTCCAAAGTGGTAAGGGATT+TGG + chr4_2:70365844-70365863 None:intergenic 45.0%
TGGGACTAAGCAACCAACAA+TGG + chr4_2:70365871-70365890 None:intergenic 45.0%
AAAACAGCTGGCTGCAGTTA+AGG - chr4_2:70366688-70366707 Msa0619260:CDS 45.0%
AAACAGCTGGCTGCAGTTAA+GGG - chr4_2:70366689-70366708 Msa0619260:CDS 45.0%
ACTTCTTCCGCTTCTTCTCA+TGG - chr4_2:70366740-70366759 Msa0619260:CDS 45.0%
! TAAGTGTTGTGCTCGTGTCT+TGG - chr4_2:70367051-70367070 Msa0619260:intron 45.0%
GTCTTGGACCTTATGGTTGA+AGG - chr4_2:70367067-70367086 Msa0619260:intron 45.0%
ATGTGGATGTGTCCGGTAAA+TGG - chr4_2:70367227-70367246 Msa0619260:intron 45.0%
TGTGGATGTGTCCGGTAAAT+GGG - chr4_2:70367228-70367247 Msa0619260:intron 45.0%
TTTCCCACTCTTCACTGGAT+GGG + chr4_2:70367342-70367361 None:intergenic 45.0%
GTAAAACGAGAATCCCTCAC+AGG + chr4_2:70367760-70367779 None:intergenic 45.0%
! CTCGTTTTACTTCTCGGGAA+AGG - chr4_2:70367770-70367789 Msa0619260:intron 45.0%
GAGAGGCTAGAAAGATATGC+AGG - chr4_2:70367925-70367944 Msa0619260:intron 45.0%
AGGCTAGAAAGATATGCAGG+TGG - chr4_2:70367928-70367947 Msa0619260:intron 45.0%
! ATATCCTTGCAAGGTTGGCT+AGG - chr4_2:70368043-70368062 Msa0619260:intron 45.0%
! TATCCTTGCAAGGTTGGCTA+GGG - chr4_2:70368044-70368063 Msa0619260:intron 45.0%
!! GGAAGGACAACTGATTTGGT+TGG - chr4_2:70368434-70368453 Msa0619260:intron 45.0%
TTCCTCCCAAAGGCTAGATA+TGG - chr4_2:70368816-70368835 Msa0619260:intron 45.0%
TCCTCCCAAAGGCTAGATAT+GGG - chr4_2:70368817-70368836 Msa0619260:intron 45.0%
! CTTCACCCATATCTAGCCTT+TGG + chr4_2:70368825-70368844 None:intergenic 45.0%
!!! TTTTATCATTATATTAATAA+TGG - chr4_2:70368285-70368304 Msa0619260:intron 5.0%
! CTCGCTAGTGGGGAATTTTC+GGG + chr4_2:70365388-70365407 None:intergenic 50.0%
! GCTCGCTAGTGGGGAATTTT+CGG + chr4_2:70365389-70365408 None:intergenic 50.0%
GAAAATTCCCCACTAGCGAG+CGG - chr4_2:70365388-70365407 Msa0619260:CDS 50.0%
AAAATTCCCCACTAGCGAGC+GGG - chr4_2:70365389-70365408 Msa0619260:CDS 50.0%
CTTCTCTCACTCTCACTCTC+AGG - chr4_2:70365480-70365499 Msa0619260:CDS 50.0%
TGCGGTTATTGTGTTGCCGT+TGG - chr4_2:70365584-70365603 Msa0619260:CDS 50.0%
TGCTCGTGTCTTGGACCTTA+TGG - chr4_2:70367060-70367079 Msa0619260:intron 50.0%
TCGCAGTGCCTTTGAACACA+TGG - chr4_2:70367288-70367307 Msa0619260:intron 50.0%
CGCAGTGCCTTTGAACACAT+GGG - chr4_2:70367289-70367308 Msa0619260:intron 50.0%
ATTGCCCATCCAGTGAAGAG+TGG - chr4_2:70367335-70367354 Msa0619260:intron 50.0%
TTGCCCATCCAGTGAAGAGT+GGG - chr4_2:70367336-70367355 Msa0619260:intron 50.0%
CTTTCCCACTCTTCACTGGA+TGG + chr4_2:70367343-70367362 None:intergenic 50.0%
TCCAGTGAAGAGTGGGAAAG+AGG - chr4_2:70367343-70367362 Msa0619260:intron 50.0%
TCCTCTTTCCCACTCTTCAC+TGG + chr4_2:70367347-70367366 None:intergenic 50.0%
! ACCCATATCTAGCCTTTGGG+AGG + chr4_2:70368821-70368840 None:intergenic 50.0%
! GAGGCATTCTCTGTTGGAGG+AGG - chr4_2:70364393-70364412 Msa0619260:three_prime_UTR 55.0%
TATTCACTGCTAAGCGGCGG+TGG + chr4_2:70365726-70365745 None:intergenic 55.0%
! GACACACAAGGTGGGTTCTC+CGG - chr4_2:70365768-70365787 Msa0619260:CDS 55.0%
GATGGCAGTGATAGCAGCGA+TGG - chr4_2:70367199-70367218 Msa0619260:intron 55.0%
! TAGCAGCGATGGCTTGCATG+TGG - chr4_2:70367210-70367229 Msa0619260:intron 55.0%
GGCTTGCATGTGGATGTGTC+CGG - chr4_2:70367220-70367239 Msa0619260:intron 55.0%
CATCCCTAGCCAACCTTGCA+AGG + chr4_2:70368050-70368069 None:intergenic 55.0%
TTCCTTCCCGCTCGCTAGTG+GGG + chr4_2:70365398-70365417 None:intergenic 60.0%
CTTCCTTCCCGCTCGCTAGT+GGG + chr4_2:70365399-70365418 None:intergenic 60.0%
ACTTCCTTCCCGCTCGCTAG+TGG + chr4_2:70365400-70365419 None:intergenic 60.0%
CAGCTGGCTGCAGTTAAGGG+TGG - chr4_2:70366692-70366711 Msa0619260:CDS 60.0%
TTCCCCACTAGCGAGCGGGA+AGG - chr4_2:70365393-70365412 Msa0619260:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 70364159 70368988 70364159 ID=Msa0619260;Name=Msa0619260
chr4_2 mRNA 70364159 70368988 70364159 ID=Msa0619260-mRNA-1;Parent=Msa0619260;Name=Msa0619260-mRNA-1;_AED=0.43;_eAED=0.26;_QI=0|0.66|0.5|0.75|0.66|0.5|4|558|685
chr4_2 exon 70364159 70364823 70364159 ID=Msa0619260-mRNA-1:exon:20508;Parent=Msa0619260-mRNA-1
chr4_2 exon 70364928 70365237 70364928 ID=Msa0619260-mRNA-1:exon:20507;Parent=Msa0619260-mRNA-1
chr4_2 exon 70365328 70366912 70365328 ID=Msa0619260-mRNA-1:exon:20506;Parent=Msa0619260-mRNA-1
chr4_2 exon 70368933 70368988 70368933 ID=Msa0619260-mRNA-1:exon:20505;Parent=Msa0619260-mRNA-1
chr4_2 CDS 70368933 70368988 70368933 ID=Msa0619260-mRNA-1:cds;Parent=Msa0619260-mRNA-1
chr4_2 CDS 70365328 70366912 70365328 ID=Msa0619260-mRNA-1:cds;Parent=Msa0619260-mRNA-1
chr4_2 CDS 70364928 70365237 70364928 ID=Msa0619260-mRNA-1:cds;Parent=Msa0619260-mRNA-1
chr4_2 CDS 70364717 70364823 70364717 ID=Msa0619260-mRNA-1:cds;Parent=Msa0619260-mRNA-1
chr4_2 three_prime_UTR 70364159 70364716 70364159 ID=Msa0619260-mRNA-1:three_prime_utr;Parent=Msa0619260-mRNA-1
Gene Sequence

>Msa0619260

ATGGTCCCTTTCTTCACCTCAAATTTTATTGAAGATTATCAGTCTTATAATACAAGTATGGATTTTATTGGTGAGAGCTGTAACTCGGCATATTCTGATGGTGATCATGAACCACCAAATAAGAAGCTTAAAAGGTTTAATGTTTGGAACTACTTTGTTAAAATTGAAGCAGATGGTAAAGAAATGTGTGAATGTAAAACTTGTGGGAAACAGTTTATTTCTGGAAGGACAGGTATATCTCATCTAAACCAACATATTACCAAATGTCCTTTGATTATGAAATCTCGTATTGCCAAGCATTTCAACCTCAAAAAAATTGATCATAGGATGGTTCGTGATTCGGTTACTCAAATGACTATAAAAAGTTGCATTCCATTTCAGTTTGTTGAGTGGGATGAATTTAGGGCATTTACCAAATTTGCTTCTTTTAATGAGGCTCGATTTCTTTCTAGAGATGCTGTTGTCGCTGATGTGATGAAAGTTTACTTGCTTGAAAAGGATAAATTGAAAAAACAGCTGGCTGCAGTTAAGGGTGGAGTGTGTTTGAGCTTTCATTGTTGGACTTCTTCCGCTTCTTCTCATGGTTATATTACTTTAACAGCTCATTTTATGGATGATCAATGGAATTTGGTTGTCAAACTGTTGAGTTTTTGTCATTTCAACCCTTCACATGATAGTTTTGAGCTATCAAGGAAGGTGATTGATTGTTTGCAGGAATGGGGAATAGAGAGAAATGTTTTTTCTATTACTATGGATAATGTTTCAGCTAATGATGAAACCTCGCAAAACTTGAAAAATCAACTTTGCTCGCTTGATAGTTTGTTGAGAACTTTCATCACATCAGCAACAGCACCATCTCTAGAAAAACATTTTAAGTGTTGTGCTCGTGTCTTGGACCTTATGGTTGAAGGGAGTTTAAAGGTAGTAAGTGGTGTATTGGACAAGATAAGGAACAGTTTGAAGTATGTGAGTGTGTCAAACTCTAGGTTGAAACAATTTTGTCAATGTGTTGAAGAAGTTGATGGCAGTGATAGCAGCGATGGCTTGCATGTGGATGTGTCCGGTAAATGGGTTTCTACTTATACGATGCTTAAGAATGCTATCAAATATCGCAGTGCCTTTGAACACATGGGTTTAAATGATACAACATATAGCGATTGCCCATCCAGTGAAGAGTGGGAAAGAGGAGAGAAGATATGTGCATTCTTGAATGATTTCTTTGAACTTACCAACATAATTTCTGAATCTACTCATCCTACATTGCATACTTATTTAGATCATATTTTGCGGATAGAGTTTTCGTTGAAAAAAATGATGTTGAACGAAGATGACAAGATAAGAGATATGGCTTCAAAGATGTCGAATGAGTTTGACAAGTATATGAGTGAATATAGCATGATTCTTGCTTTTGGTTGTGTTTTAGATCCTCGTTTGAAGTTCGAATCTTTGAAGTATCTGTACGAAAAATTAGGTCATGATACAGAGACAGTAAAAGATAAGGTGAGCAATGTGAGGAAAACTTTATATTCTCTTTTTAATGAATATGCCAACAAAGTTGCATCAATTTCAATTAGATTACCTGTGAGGGATTCTCGTTTTACTTCTCGGGAAAGGAAGACAGACTTGCTTTCGGAGTATCGTGAATATGTTGAAAAGGAGAGGCTAGAAAGATATGCAGGTGGTGTGACTCAACTTGATCTTTATTTGAAAGAGAGAGACAGAGGCTATTATGTAAATGCTTTACAATATTGGAAAGACAATGAGAAAGAGTATTATATCCTTGCAAGGTTGGCTAGGGATGTATTGAGTGTCCCATTAATCGCAGTAGCATCAGAATCTCCTTTTAGTCCTGGCAACTGTATTTTGAACAAGTATAGAAGTTGTATGTTTTCAGAAAATCTGCAAGCTCTCGTATGCTCTCATAATTGGTTATTTGGCTTCTCACCTATTGATCAATTTGGAGACGAGATTGAGGAGACAAGAAAAATTGGCAAAAATCTTTCTAAGCAAGTTTCAAAATGTCATTGCGTCCATGAAAACAAAACTGAAGATTCATAG
Protein sequence

>Msa0619260

MVPFFTSNFIEDYQSYNTSMDFIGESCNSAYSDGDHEPPNKKLKRFNVWNYFVKIEADGKEMCECKTCGKQFISGRTGISHLNQHITKCPLIMKSRIAKHFNLKKIDHRMVRDSVTQMTIKSCIPFQFVEWDEFRAFTKFASFNEARFLSRDAVVADVMKVYLLEKDKLKKQLAAVKGGVCLSFHCWTSSASSHGYITLTAHFMDDQWNLVVKLLSFCHFNPSHDSFELSRKVIDCLQEWGIERNVFSITMDNVSANDETSQNLKNQLCSLDSLLRTFITSATAPSLEKHFKCCARVLDLMVEGSLKVVSGVLDKIRNSLKYVSVSNSRLKQFCQCVEEVDGSDSSDGLHVDVSGKWVSTYTMLKNAIKYRSAFEHMGLNDTTYSDCPSSEEWERGEKICAFLNDFFELTNIISESTHPTLHTYLDHILRIEFSLKKMMLNEDDKIRDMASKMSNEFDKYMSEYSMILAFGCVLDPRLKFESLKYLYEKLGHDTETVKDKVSNVRKTLYSLFNEYANKVASISIRLPVRDSRFTSRERKTDLLSEYREYVEKERLERYAGGVTQLDLYLKERDRGYYVNALQYWKDNEKEYYILARLARDVLSVPLIAVASESPFSPGNCILNKYRSCMFSENLQALVCSHNWLFGFSPIDQFGDEIEETRKIGKNLSKQVSKCHCVHENKTEDS*