AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1390800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390800 MtrunA17_Chr8g0383211 75.852 675 149 6 570 1232 4 676 0.0 1035
Msa1390800 MtrunA17_Chr8g0383211 75.398 565 136 2 1 565 53 614 0.0 870
Msa1390800 MtrunA17_Chr8g0383181 94.828 290 13 1 567 854 1 290 0.0 574
Msa1390800 MtrunA17_Chr8g0383181 73.092 249 64 2 1 247 43 290 1.72e-121 378
Msa1390800 MtrunA17_Chr8g0383171 96.667 210 7 0 1023 1232 63 272 5.47e-139 422
Msa1390800 MtrunA17_Chr8g0383171 56.954 151 61 2 416 565 63 210 2.83e-43 159
Msa1390800 MtrunA17_Chr4g0052681 37.873 536 306 9 671 1194 41 561 7.01e-104 341
Msa1390800 MtrunA17_Chr4g0052681 36.207 522 296 10 60 565 37 537 2.27e-89 301
Msa1390800 MtrunA17_Chr8g0383081 36.926 566 333 9 649 1206 17 566 1.65e-103 339
Msa1390800 MtrunA17_Chr8g0383081 36.893 515 300 9 58 565 33 529 6.18e-89 299
Msa1390800 MtrunA17_Chr8g0383041 34.759 561 326 12 650 1194 22 558 3.86e-91 306
Msa1390800 MtrunA17_Chr8g0383041 36.364 473 277 8 101 565 78 534 1.89e-80 276
Msa1390800 MtrunA17_Chr8g0354631 27.440 707 441 21 540 1191 13 702 2.38e-71 254
Msa1390800 MtrunA17_Chr8g0354631 26.656 604 382 17 4 564 95 680 1.65e-55 207
Msa1390800 MtrunA17_Chr5g0402891 30.838 561 333 14 659 1191 45 578 6.19e-67 238
Msa1390800 MtrunA17_Chr5g0402891 28.492 537 337 13 52 565 45 557 4.63e-51 191
Msa1390800 MtrunA17_Chr8g0383071 41.497 294 162 3 717 1010 27 310 3.75e-63 217
Msa1390800 MtrunA17_Chr8g0383071 40.972 288 160 3 110 397 27 304 6.13e-60 208
Msa1390800 MtrunA17_Chr2g0308821 27.778 558 359 11 654 1191 125 658 3.67e-62 225
Msa1390800 MtrunA17_Chr2g0308821 27.360 519 355 12 55 565 133 637 3.11e-52 196
Msa1390800 MtrunA17_Chr7g0263231 27.504 669 402 20 584 1196 432 1073 5.74e-61 228
Msa1390800 MtrunA17_Chr7g0263231 27.723 606 359 21 4 557 461 1039 3.44e-47 184
Msa1390800 MtrunA17_Chr8g0359341 27.314 659 407 15 588 1191 65 706 2.07e-59 218
Msa1390800 MtrunA17_Chr8g0359341 30.000 540 339 13 37 566 176 686 7.61e-57 211
Msa1390800 MtrunA17_Chr7g0263261 27.900 681 406 21 573 1196 362 1014 4.69e-59 221
Msa1390800 MtrunA17_Chr7g0263261 27.823 611 352 21 4 557 402 980 3.12e-42 168
Msa1390800 MtrunA17_Chr8g0383051 38.571 280 160 5 663 942 46 313 1.85e-49 179
Msa1390800 MtrunA17_Chr8g0383051 38.732 284 154 6 56 335 46 313 2.23e-48 175
Msa1390800 MtrunA17_Chr2g0333261 25.329 683 407 21 586 1198 37 686 2.56e-47 181
Msa1390800 MtrunA17_Chr2g0333261 24.959 613 372 20 4 557 66 649 4.64e-40 159
Msa1390800 MtrunA17_Chr4g0053391 37.269 271 162 4 946 1212 1 267 5.02e-45 164
Msa1390800 MtrunA17_Chr4g0053391 36.087 230 137 3 339 565 1 223 4.09e-33 130
Msa1390800 MtrunA17_Chr4g0003151 23.601 661 426 20 586 1191 23 659 1.48e-42 166
Msa1390800 MtrunA17_Chr4g0003151 23.755 522 357 14 55 557 131 630 1.81e-30 129
Msa1390800 MtrunA17_Chr4g0052601 28.329 413 259 12 585 976 27 423 7.29e-42 159
Msa1390800 MtrunA17_Chr4g0052601 31.595 326 202 8 51 369 112 423 2.45e-39 152
Msa1390800 MtrunA17_Chr1g0192041 40.606 165 96 1 899 1063 62 224 2.78e-36 137
Msa1390800 MtrunA17_Chr1g0192041 35.000 180 115 1 292 471 62 239 6.65e-31 122
Msa1390800 MtrunA17_Chr5g0408131 39.234 209 115 7 991 1193 18 220 9.40e-30 119
Msa1390800 MtrunA17_Chr5g0408131 36.364 187 107 4 384 565 18 197 3.55e-15 76.6
Msa1390800 MtrunA17_Chr8g0383061 34.951 206 121 5 996 1194 1 200 1.65e-27 112
Msa1390800 MtrunA17_Chr8g0383061 33.880 183 108 6 389 565 1 176 4.70e-18 84.7
Msa1390800 MtrunA17_Chr4g0052611 31.455 213 120 8 990 1191 6 203 3.90e-21 94.4
Msa1390800 MtrunA17_Chr4g0052611 30.500 200 99 8 383 565 6 182 9.31e-13 69.7
Msa1390800 MtrunA17_Chr4g0062411 23.182 660 435 23 563 1191 31 649 1.44e-20 98.2
Msa1390800 MtrunA17_Chr8g0383091 36.111 144 85 3 996 1134 1 142 2.90e-18 82.8
Msa1390800 MtrunA17_Chr8g0383091 37.500 144 81 4 389 527 1 140 8.91e-17 78.6
Msa1390800 MtrunA17_Chr8g0390371 51.471 68 33 0 1128 1195 14 81 5.94e-18 80.1
Msa1390800 MtrunA17_Chr3g0108001 37.736 106 63 1 1126 1231 8 110 9.10e-16 74.7
Msa1390800 MtrunA17_Chr1g0162951 46.429 56 30 0 1144 1199 1 56 1.93e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390800 AT3G42170.2 26.379 671 411 22 570 1192 18 653 2.08e-63 229
Msa1390800 AT3G42170.2 27.324 527 327 14 46 557 138 623 1.49e-50 191
Msa1390800 AT3G42170.1 26.379 671 411 22 570 1192 40 675 2.74e-63 229
Msa1390800 AT3G42170.1 27.324 527 327 14 46 557 160 645 2.00e-50 191
Msa1390800 AT1G18560.1 19.596 643 442 20 585 1191 46 649 1.87e-15 82.0

Find 190 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACAAATATTGAAAATTT+TGG 0.133032 tig0021384:-91892 Msa1390800:three_prime_UTR
TTGTTGAGTGGGATGAATTT+AGG 0.159892 tig0021384:-94237 Msa1390800:CDS
TTGTTGAGTGGGATAAATTT+AGG 0.165670 tig0021384:-98766 Msa1390800:CDS
TGTGGGAAACAGTTTATTTC+TGG 0.178494 tig0021384:-94418 Msa1390800:CDS
CTCATTAAAAGAAGCAAATT+TGG 0.195198 tig0021384:+94207 None:intergenic
TACTTTAACGGCTCATTATA+TGG 0.197596 tig0021384:-98558 Msa1390800:CDS
TGCTCTCATAATTGGTTATT+TGG 0.200558 tig0021384:-92614 Msa1390800:CDS
TGCTCGTGTCTTGGACCTTA+TGG 0.214270 tig0021384:-93738 Msa1390800:CDS
CTCATTATGAGAAGCAAATT+TGG 0.226906 tig0021384:+98736 None:intergenic
ATGTAAATGCTTTACAATAT+TGG 0.232405 tig0021384:-92799 Msa1390800:CDS
TAAGCTTGAAGAGAGTTTAA+AGG 0.234730 tig0021384:-98249 Msa1390800:CDS
TCTGATGCAACTGTGATTAT+TGG 0.250021 tig0021384:+97246 None:intergenic
CTTTCCCACTCTTCACTTGA+TGG 0.250054 tig0021384:+97987 None:intergenic
CTCTCGTATGCTCTCATAAT+TGG 0.250561 tig0021384:-92622 Msa1390800:CDS
TATGGATGATCAATGGAATT+TGG 0.253112 tig0021384:-94011 Msa1390800:CDS
TCTGATGCTACTGCGATTAA+TGG 0.259960 tig0021384:+92716 None:intergenic
CACCAAATAAGAAGCTTAAA+AGG 0.263653 tig0021384:-94507 Msa1390800:CDS
AAATATGAACAAAATGAGTA+TGG 0.263851 tig0021384:+97886 None:intergenic
GCTCAATTTCTTTCTAGATA+TGG 0.267417 tig0021384:-98713 Msa1390800:CDS
GAAGGTGATTGGTTATTTAC+AGG 0.271369 tig0021384:-98456 Msa1390800:CDS
CAAATATCATTTCTCATTAT+AGG 0.278019 tig0021384:+92283 None:intergenic
TTCCTCCCAAAGGCTAGATA+TGG 0.279973 tig0021384:-91979 Msa1390800:three_prime_UTR
TTTCATAATCAAAGGACATT+TGG 0.290158 tig0021384:+98889 None:intergenic
TGTTGAGTGGGATGAATTTA+GGG 0.292056 tig0021384:-94236 Msa1390800:CDS
TATGGTTGAAGAGAGTTTAA+AGG 0.292459 tig0021384:-93720 Msa1390800:CDS
TATCAACACACAGATCAATT+TGG 0.297073 tig0021384:-92484 Msa1390800:intron
AAAACAGCTGGCTGCAGTTA+AGG 0.299415 tig0021384:-94110 Msa1390800:CDS
ATACAGTTGCCAGGACTAAA+AGG 0.305618 tig0021384:+92689 None:intergenic
TTAAACTCTCTTCAAGCTTA+AGG 0.308627 tig0021384:+98252 None:intergenic
TGTTGAGTGGGATAAATTTA+GGG 0.308675 tig0021384:-98765 Msa1390800:CDS
ATTTGGATGTGTCCGGTAAA+TGG 0.309001 tig0021384:-98100 Msa1390800:CDS
AGCTTAAAAGGTTTAATGTT+TGG 0.315159 tig0021384:-94495 Msa1390800:CDS
GAAAATTTGTGAATTCTTGA+TGG 0.320622 tig0021384:-97958 Msa1390800:CDS
TTCATAATCAAAGGACATTT+GGG 0.323172 tig0021384:+98890 None:intergenic
TATAGCATGATTCTTGCTTT+TGG 0.324684 tig0021384:-93230 Msa1390800:CDS
ATACAAAATCCTAGAACTTC+TGG 0.325311 tig0021384:+92016 None:intergenic
TTATTTGGCTTCTCACCTAT+TGG 0.325496 tig0021384:-92599 Msa1390800:intron
ATGTGGATGTGTCCGGTAAA+TGG 0.329056 tig0021384:-93571 Msa1390800:CDS
ACATGGATTCCAGAAGTTCT+AGG 0.339938 tig0021384:-92025 Msa1390800:three_prime_UTR
TCCTCTTTCCCACTCTTCAC+TGG 0.340787 tig0021384:+93454 None:intergenic
TCGTAGCTATATTACTTTAA+CGG 0.341643 tig0021384:-98570 Msa1390800:CDS
TTTCATAATCAAAGGACATT+TGG 0.349734 tig0021384:+94360 None:intergenic
CTTCACCCATATCTAGCCTT+TGG 0.354398 tig0021384:+91973 None:intergenic
GAGTCAACTTGATCTTTATT+TGG 0.355874 tig0021384:-97370 Msa1390800:CDS
GATTGGAAGGACAACTGATT+TGG 0.358586 tig0021384:-92365 Msa1390800:three_prime_UTR
GAAGGTGATTGATTGTTTGC+AGG 0.362557 tig0021384:-93927 Msa1390800:CDS
TGAGTTGAAGTAGAAGAAAA+AGG 0.379024 tig0021384:+97558 None:intergenic
TTCACCCATATCTAGCCTTT+GGG 0.379745 tig0021384:+91974 None:intergenic
TGTGTTTGAGCTTTCATTGT+TGG 0.387670 tig0021384:-94081 Msa1390800:CDS
GTCACAAAAGTTGTCTCAAA+TGG 0.393919 tig0021384:-92124 Msa1390800:three_prime_UTR
TGAAATTGATGCAACTTTGT+TGG 0.402252 tig0021384:+93073 None:intergenic
TCTTTATTTGGAAGAGATAG+AGG 0.403271 tig0021384:-97358 Msa1390800:CDS
TTCAACTCAGGATTGGAATC+TGG 0.404305 tig0021384:-97544 Msa1390800:CDS
AGAAGTTGTCACAAATTAGT+TGG 0.404754 tig0021384:+92259 None:intergenic
TCATAGGATGGTTCGTGATT+CGG 0.405498 tig0021384:-94299 Msa1390800:CDS
AAACAGCTAGCTGGAATAGA+AGG 0.405542 tig0021384:-98638 Msa1390800:CDS
AAGTGCAAAGGTCATAAATA+TGG 0.406903 tig0021384:-97306 Msa1390800:CDS
TCCCACTCAACAAACTGAAA+TGG 0.408842 tig0021384:+94247 None:intergenic
AAAACTGAAGATTCATAGAT+TGG 0.409089 tig0021384:-92382 Msa1390800:exon
TCCATTTCACTTTGTTGAGT+GGG 0.411202 tig0021384:-98777 Msa1390800:CDS
AGGCAAGAAAAGTATGTAGA+TGG 0.411458 tig0021384:-97396 Msa1390800:CDS
AAAGGTAGTAAGTGGTGTAT+TGG 0.412099 tig0021384:-93702 Msa1390800:CDS
TGGCACCGATGGCTTGCATT+TGG 0.417274 tig0021384:-98117 Msa1390800:CDS
TCCATTTCAGTTTGTTGAGT+GGG 0.419318 tig0021384:-94248 Msa1390800:CDS
TTTGTTTGCTGGGATCATTT+AGG 0.419576 tig0021384:+91907 None:intergenic
TTTACTTGTGGCGGAAGATC+AGG 0.421102 tig0021384:-98938 Msa1390800:CDS
TCCCACTCAACAAAGTGAAA+TGG 0.425213 tig0021384:+98776 None:intergenic
GATTGGTTATTTACAGGAAT+GGG 0.428538 tig0021384:-98450 Msa1390800:CDS
AAAGGTAGTAAGTGACGTAT+TGG 0.428636 tig0021384:-98231 Msa1390800:CDS
CTTTCCCACTCTTCACTGGA+TGG 0.428816 tig0021384:+93458 None:intergenic
TTGCACTTCCAATATTCTAA+AGG 0.433259 tig0021384:+97321 None:intergenic
ATAAGTAGAAACCCATTTAC+CGG 0.433597 tig0021384:+93559 None:intergenic
TCCTCCCAAAGGCTAGATAT+GGG 0.435705 tig0021384:-91978 Msa1390800:three_prime_UTR
AAACAGCTGGCTGCAGTTAA+GGG 0.437970 tig0021384:-94109 Msa1390800:CDS
CAGTTTATTTCTGGAAGGAC+AGG 0.438009 tig0021384:-94409 Msa1390800:CDS
GTCATAGGAATATGTTGAAA+AGG 0.438311 tig0021384:-92894 Msa1390800:intron
ACTTCTTCCGCTTCTTCTCA+TGG 0.439368 tig0021384:-94058 Msa1390800:CDS
CTGATGCTACTGCGATTAAT+GGG 0.442867 tig0021384:+92717 None:intergenic
GAGCTATCAAGGAAGGTGAT+TGG 0.442922 tig0021384:-98467 Msa1390800:CDS
CTTCTACTTCAACTCAGGAT+TGG 0.445475 tig0021384:-97551 Msa1390800:CDS
TGATTGATTGTTTGCAGGAA+TGG 0.447807 tig0021384:-93922 Msa1390800:CDS
CGGTTGTATTTGATCAAACA+TGG 0.448282 tig0021384:-92042 Msa1390800:three_prime_UTR
ATAAGTAGAGACCCATTTAC+CGG 0.448356 tig0021384:+98088 None:intergenic
TGCGAGTTGCCATCATTAGC+TGG 0.451166 tig0021384:+98386 None:intergenic
GATTGATTGTTTGCAGGAAT+GGG 0.451798 tig0021384:-93921 Msa1390800:CDS
AAGGAAGACAGACTTGCTTT+CGG 0.459823 tig0021384:-93009 Msa1390800:CDS
GAAAGTTTACTTGCTTGAAA+AGG 0.460044 tig0021384:-94143 Msa1390800:CDS
CACAGTAGAAGGATAAAATC+AGG 0.460675 tig0021384:+91824 None:intergenic
TCTAAATAAGTATGCAATGT+AGG 0.460686 tig0021384:+93365 None:intergenic
CAAATTTGCTTCTCATAATG+AGG 0.461420 tig0021384:-98735 Msa1390800:CDS
TGATTGGTTATTTACAGGAA+TGG 0.461963 tig0021384:-98451 Msa1390800:CDS
CAATGTGTTGAAGAAGTTGA+TGG 0.462685 tig0021384:-93617 Msa1390800:CDS
TTAAACTCTCTTCAACCATA+AGG 0.463297 tig0021384:+93723 None:intergenic
TTTGGATGTGTCCGGTAAAT+GGG 0.464336 tig0021384:-98099 Msa1390800:CDS
TTCAATTAGATTACCTGTGA+GGG 0.465347 tig0021384:-93054 Msa1390800:CDS
TGTGTGAATGTATGACTTGT+GGG 0.467685 tig0021384:-98967 Msa1390800:CDS
TTTGTTAAAATTGAAGCAGA+TGG 0.474429 tig0021384:-94466 Msa1390800:CDS
TAAGTGTTGTGCTCATGTCT+TGG 0.475565 tig0021384:-98276 Msa1390800:CDS
TTTCCCACTCTTCACTTGAT+GGG 0.475902 tig0021384:+97988 None:intergenic
AGATGACAAGATAAGAGATA+TGG 0.477086 tig0021384:-93294 Msa1390800:CDS
AGGAATATCTTGAAATAAAG+AGG 0.479100 tig0021384:-97416 Msa1390800:CDS
ATCATAACATGGTTCGTGAA+TGG 0.480106 tig0021384:-98829 Msa1390800:CDS
TCCAGTGAAGAGTGGGAAAG+AGG 0.481839 tig0021384:-93455 Msa1390800:CDS
AGTAGATTGAGAAGTAATAG+TGG 0.482788 tig0021384:+97920 None:intergenic
CTCATTATATGGATGATCAA+TGG 0.483240 tig0021384:-98547 Msa1390800:CDS
AAGGACATTTGGGAATATGT+TGG 0.484528 tig0021384:+98900 None:intergenic
TGTGGATGTGTCCGGTAAAT+GGG 0.486423 tig0021384:-93570 Msa1390800:CDS
ATATCCTTGCAAGGTTGGCT+AGG 0.487414 tig0021384:-92754 Msa1390800:CDS
TAAGTGTTGTGCTCGTGTCT+TGG 0.489616 tig0021384:-93747 Msa1390800:CDS
TTTCCCACTCTTCACTGGAT+GGG 0.492201 tig0021384:+93459 None:intergenic
GTATTATATCCTTGCAAGGT+TGG 0.493126 tig0021384:-92759 Msa1390800:CDS
AAGGACATTTGGTAATATGT+TGG 0.494056 tig0021384:+94371 None:intergenic
AATATAGCTACGAGAAGAAG+TGG 0.494168 tig0021384:+98580 None:intergenic
TTCCATTTCACTTTGTTGAG+TGG 0.494574 tig0021384:-98778 Msa1390800:CDS
TGTCAATGTGTTGAAGAAGT+TGG 0.495655 tig0021384:-98149 Msa1390800:CDS
TCAAGTGAAGAGTGGGAAAG+AGG 0.498562 tig0021384:-97984 Msa1390800:CDS
GAGAGTTTAAAGGTAGTAAG+TGG 0.500460 tig0021384:-93710 Msa1390800:CDS
TCAATTTGGAGACGAGATTG+AGG 0.505434 tig0021384:-92470 Msa1390800:CDS
GTGTTTATAATCTTCAGATA+CGG 0.509684 tig0021384:-92062 Msa1390800:three_prime_UTR
ATATGGTATTCTTGAAAGGA+TGG 0.514469 tig0021384:-97289 Msa1390800:CDS
GAAGAAGTTGGTGGCGGTGA+TGG 0.519417 tig0021384:-98137 Msa1390800:CDS
TGTGTGAATGTAAAACTTGT+GGG 0.519867 tig0021384:-94435 Msa1390800:CDS
TATCCTTGCAAGGTTGGCTA+GGG 0.521039 tig0021384:-92753 Msa1390800:CDS
GGAAGGACAACTGATTTGGT+TGG 0.526669 tig0021384:-92361 Msa1390800:three_prime_UTR
ATTTAAACCCATGTGTTCAA+AGG 0.528848 tig0021384:+93502 None:intergenic
ATAAATATGGTATTCTTGAA+AGG 0.529261 tig0021384:-97293 Msa1390800:CDS
GAGAGGCTAGAAAGATATGC+AGG 0.531332 tig0021384:-92872 Msa1390800:CDS
GATAATGATCCAGCTAATGA+TGG 0.532662 tig0021384:-98395 Msa1390800:CDS
CTCGACATATAATATGTAGT+TGG 0.533284 tig0021384:-92084 Msa1390800:three_prime_UTR
CTGAAGATTCATAGATTGGA+AGG 0.533653 tig0021384:-92378 Msa1390800:exon
GTGACGTATTGGAAAAGATA+AGG 0.535221 tig0021384:-98220 Msa1390800:CDS
CATCCCTAGCCAACCTTGCA+AGG 0.536180 tig0021384:+92750 None:intergenic
AGTAGATTCAGAAATTATGT+TGG 0.537129 tig0021384:+93391 None:intergenic
TTCCATTTCAGTTTGTTGAG+TGG 0.541712 tig0021384:-94249 Msa1390800:CDS
TGCAGACTTGTTACTTGATG+TGG 0.542960 tig0021384:-92326 Msa1390800:three_prime_UTR
GGCTTGCATTTGGATGTGTC+CGG 0.544192 tig0021384:-98107 Msa1390800:CDS
TTGTTCAAAATACAGTTGCC+AGG 0.545172 tig0021384:+92680 None:intergenic
AGCTCAAAACTATCATGTGA+AGG 0.546391 tig0021384:+93956 None:intergenic
TCGCAGTGCCTTTGAACACA+TGG 0.551660 tig0021384:-93510 Msa1390800:CDS
ACTGCTGCCAGGACTAAAAG+TGG 0.552302 tig0021384:+97221 None:intergenic
GGAAACAGTTTATTTCTGGA+AGG 0.552696 tig0021384:-94414 Msa1390800:CDS
CTTTATTTGGAAGAGATAGA+GGG 0.557361 tig0021384:-97357 Msa1390800:CDS
GTGGTGTATTGGACAAGATA+AGG 0.558276 tig0021384:-93691 Msa1390800:CDS
AACGTCAAGTAGTTTATATG+TGG 0.558793 tig0021384:-97586 Msa1390800:CDS
AGCTCAAAATTATCATGTGA+TGG 0.561203 tig0021384:+98485 None:intergenic
GGCTTGCATGTGGATGTGTC+CGG 0.562567 tig0021384:-93578 Msa1390800:CDS
ATACGAGATTTCATAATCAA+AGG 0.562920 tig0021384:+94352 None:intergenic
ATACGAGATTTCATAATCAA+AGG 0.562920 tig0021384:+98881 None:intergenic
AATATGAACAAAATGAGTAT+GGG 0.569310 tig0021384:+97887 None:intergenic
AAGAGTATTATATCCTTGCA+AGG 0.570372 tig0021384:-92763 Msa1390800:CDS
CGCAGTGCCTTTGAACACAT+GGG 0.570409 tig0021384:-93509 Msa1390800:CDS
CTGCCCATCAAGTGAAGAGT+GGG 0.571068 tig0021384:-97991 Msa1390800:CDS
AATATAACCATGAGAAGAAG+CGG 0.571617 tig0021384:+94051 None:intergenic
TATTGGTGAGAGCTGTAACT+CGG 0.573522 tig0021384:-94554 Msa1390800:CDS
TACAGAGACAGTAAAAGATA+AGG 0.576841 tig0021384:-93141 Msa1390800:CDS
TGTGGGAAACTATTTACTTG+TGG 0.576941 tig0021384:-98950 Msa1390800:CDS
ATGTGTGAATGTAAAACTTG+TGG 0.579067 tig0021384:-94436 Msa1390800:CDS
TTGTGAGTGTGTCAAACTCT+AGG 0.579871 tig0021384:-98184 Msa1390800:CDS
TTAGAATATTGGAAGTGCAA+AGG 0.579944 tig0021384:-97318 Msa1390800:CDS
GGTGGCGGTGATGGCACCGA+TGG 0.585901 tig0021384:-98128 Msa1390800:CDS
TTGTTCAAAATACTGCTGCC+AGG 0.586609 tig0021384:+97210 None:intergenic
AGGAATATGTTGAAAAGGAG+AGG 0.590759 tig0021384:-92889 Msa1390800:CDS
TACGGAGACAGTAAAAGATA+AGG 0.592519 tig0021384:-97670 Msa1390800:CDS
ATTGATTGTTTGCAGGAATG+GGG 0.593807 tig0021384:-93920 Msa1390800:CDS
TTGCCCATCCAGTGAAGAGT+GGG 0.595769 tig0021384:-93462 Msa1390800:CDS
ATGTGTGAATGTATGACTTG+TGG 0.598268 tig0021384:-98968 Msa1390800:CDS
TGTAACTCGGCATATTCTGA+TGG 0.599813 tig0021384:-94541 Msa1390800:CDS
CAAAGAGCTCAATCATAACA+TGG 0.601276 tig0021384:-98840 Msa1390800:CDS
ACCCATATCTAGCCTTTGGG+AGG 0.604439 tig0021384:+91977 None:intergenic
TTTCAATTAGATTACCTGTG+AGG 0.604805 tig0021384:-93055 Msa1390800:CDS
TATTTGAAAGAGAGAGACAG+AGG 0.606953 tig0021384:-92827 Msa1390800:CDS
CACATCCAAATGCAAGCCAT+CGG 0.607045 tig0021384:+98112 None:intergenic
ATGTGAGTGTGTCAAACTCT+AGG 0.607095 tig0021384:-93655 Msa1390800:CDS
CAATGTGTTGAAGAAGTTGG+TGG 0.610783 tig0021384:-98146 Msa1390800:CDS
GATGGCAGTGATAGCAGCGA+TGG 0.612489 tig0021384:-93599 Msa1390800:CDS
GCTCAAAACTATCATGTGAA+GGG 0.613016 tig0021384:+93957 None:intergenic
ATTGCCCATCCAGTGAAGAG+TGG 0.614031 tig0021384:-93463 Msa1390800:CDS
GTAAAACGAGAATCCCTCAC+AGG 0.619596 tig0021384:+93041 None:intergenic
GGGAAACTATTTACTTGTGG+CGG 0.631739 tig0021384:-98947 Msa1390800:CDS
ACTGCCCATCAAGTGAAGAG+TGG 0.632218 tig0021384:-97992 Msa1390800:CDS
TGGGATCATTTAGGCACACA+AGG 0.638589 tig0021384:+91916 None:intergenic
CAGCTGGCTGCAGTTAAGGG+TGG 0.640291 tig0021384:-94106 Msa1390800:CDS
AAGATAAGGTGAGCAATGTG+AGG 0.641913 tig0021384:-93127 Msa1390800:CDS
ACAAAATGAGTATGGGACGT+AGG 0.649232 tig0021384:+97894 None:intergenic
TAGCAGCGATGGCTTGCATG+TGG 0.661586 tig0021384:-93588 Msa1390800:CDS
AGATGACACGATAAGAGACA+TGG 0.679302 tig0021384:-97823 Msa1390800:CDS
AAGATAAGGTGAGCAGTGCG+AGG 0.681217 tig0021384:-97656 Msa1390800:CDS
TGTGTTGAAGAAGTTGGTGG+CGG 0.686517 tig0021384:-98143 Msa1390800:CDS
AAAGATTCGAACTTCAAACG+AGG 0.704807 tig0021384:+93194 None:intergenic
AGGCTAGAAAGATATGCAGG+TGG 0.719348 tig0021384:-92869 Msa1390800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTTTTCTATTACTA+TGG - tig0021384:92380-92399 Msa1390800:exon 10.0%
!!! ATAAATTGTTATTTATTTTG+CGG - tig0021384:95565-95584 Msa1390800:intron 10.0%
!!! TTTTTTTTTTTTTTTCAGTA+TGG - tig0021384:96216-96235 Msa1390800:intron 10.0%
!!! ATAAAAATCCTTTAGAATAT+TGG - tig0021384:93468-93487 Msa1390800:CDS 15.0%
!! TATTATCGTTATATTAACTT+TGG - tig0021384:93747-93766 Msa1390800:CDS 15.0%
!! CTTTATTACATATATCAATT+CGG - tig0021384:93776-93795 Msa1390800:CDS 15.0%
!! ATAATCTTCAATAAAATTTG+AGG + tig0021384:94170-94189 None:intergenic 15.0%
!! TGTAATAAAAATAAAATACG+AGG - tig0021384:94710-94729 Msa1390800:intron 15.0%
!! TGTAAAAAGTTAATACAAAA+AGG - tig0021384:95348-95367 Msa1390800:intron 15.0%
!! GTAAAAAGTTAATACAAAAA+GGG - tig0021384:95349-95368 Msa1390800:intron 15.0%
!!! AATAATGAAAACAATTCTTT+TGG - tig0021384:96038-96057 Msa1390800:intron 15.0%
!!! AAATGTTTTTTCTATTACTA+TGG - tig0021384:96909-96928 Msa1390800:intron 15.0%
!!! CAAACAAATATTGAAAATTT+TGG - tig0021384:98905-98924 Msa1390800:CDS 15.0%
!!! ATTGTTGAATTTTTGTCATT+TGG - tig0021384:92287-92306 Msa1390800:three_prime_UTR 20.0%
!!! TTAAAATGTTTTTCTAGAGA+TGG + tig0021384:92504-92523 None:intergenic 20.0%
!! AATATGAACAAAATGAGTAT+GGG + tig0021384:92913-92932 None:intergenic 20.0%
!! AAATATGAACAAAATGAGTA+TGG + tig0021384:92914-92933 None:intergenic 20.0%
!!! TACTCATTTTGTTCATATTT+TGG - tig0021384:92914-92933 Msa1390800:intron 20.0%
!!! ACTCATTTTGTTCATATTTT+GGG - tig0021384:92915-92934 Msa1390800:intron 20.0%
!! ATAAATATGGTATTCTTGAA+AGG - tig0021384:93504-93523 Msa1390800:CDS 20.0%
!! AGAATAAATGTAAACTTCTA+AGG + tig0021384:94011-94030 None:intergenic 20.0%
!!! TTTTCTACTAATCAACTAAA+AGG + tig0021384:94102-94121 None:intergenic 20.0%
!!! ATTATCAGTCTTATAATACA+AGG - tig0021384:94185-94204 Msa1390800:CDS 20.0%
!!! TTGATTCATTCATTTTTTAG+AGG - tig0021384:94366-94385 Msa1390800:CDS 20.0%
!!! GAAAATCAATCTTATTTACA+TGG + tig0021384:94508-94527 None:intergenic 20.0%
!! AGTTCTCTCAAAAAAAAAAA+AGG - tig0021384:94640-94659 Msa1390800:intron 20.0%
!!! TATATGTCTAGATTTTGAAA+GGG + tig0021384:95100-95119 None:intergenic 20.0%
!!! TATATTTTGACAAGTAAAGT+GGG + tig0021384:95889-95908 None:intergenic 20.0%
!!! ATATATTTTGACAAGTAAAG+TGG + tig0021384:95890-95909 None:intergenic 20.0%
!!! TTTTTCAGTATGGATTTTAT+TGG - tig0021384:96226-96245 Msa1390800:intron 20.0%
!!! TTAAAATGTTTTTCTAGAGA+TGG + tig0021384:92504-92523 None:intergenic 20.0%
!!! CTTATTTAGATCATATTTTG+CGG - tig0021384:97445-97464 Msa1390800:intron 20.0%
!!! TCTTTGATTTAAATTGTCAT+AGG - tig0021384:97888-97907 Msa1390800:CDS 20.0%
!! ATGTAAATGCTTTACAATAT+TGG - tig0021384:97998-98017 Msa1390800:CDS 20.0%
!! CAAATATCATTTCTCATTAT+AGG + tig0021384:98517-98536 None:intergenic 20.0%
!!! ATTTTCAATATTTGTTTGCT+GGG + tig0021384:98903-98922 None:intergenic 20.0%
!!! AATTTTCAATATTTGTTTGC+TGG + tig0021384:98904-98923 None:intergenic 20.0%
! TTCATAATCAAAGGACATTT+GGG + tig0021384:91910-91929 None:intergenic 25.0%
! TTTCATAATCAAAGGACATT+TGG + tig0021384:91911-91930 None:intergenic 25.0%
! ATACGAGATTTCATAATCAA+AGG + tig0021384:91919-91938 None:intergenic 25.0%
! TCGTAGCTATATTACTTTAA+CGG - tig0021384:92227-92246 Msa1390800:three_prime_UTR 25.0%
!! ATGATAATTTTGAGCTATCA+AGG - tig0021384:92319-92338 Msa1390800:three_prime_UTR 25.0%
!! TTTTAAACACATGTGTTCAA+AGG + tig0021384:92769-92788 None:intergenic 25.0%
! GAAAATTTGTGAATTCTTGA+TGG - tig0021384:92839-92858 Msa1390800:CDS 25.0%
!!! GAATTCTTGATGGTTTTTTA+TGG - tig0021384:92849-92868 Msa1390800:CDS 25.0%
!! CTCATTTTGTTCATATTTTG+GGG - tig0021384:92916-92935 Msa1390800:intron 25.0%
! GAGTATCTATACGAAAAATT+AGG - tig0021384:93098-93117 Msa1390800:CDS 25.0%
! CGAAAAATTAGGTTATGATA+CGG - tig0021384:93109-93128 Msa1390800:CDS 25.0%
! ACAAAACAAAACAAAAGAGT+TGG + tig0021384:93319-93338 None:intergenic 25.0%
!! TCTTTGATTTAAACTGTCAT+AGG - tig0021384:93361-93380 Msa1390800:CDS 25.0%
! AGGAATATCTTGAAATAAAG+AGG - tig0021384:93381-93400 Msa1390800:CDS 25.0%
! GAACAAGTATAAAAGTTGTA+TGG - tig0021384:93604-93623 Msa1390800:CDS 25.0%
! AAAACTGAAGATTGATAGAT+TGG - tig0021384:93878-93897 Msa1390800:CDS 25.0%
! GTAAATTATGGATATGATTC+AGG + tig0021384:94045-94064 None:intergenic 25.0%
! TCATATCCATAATTTACTCA+TGG - tig0021384:94048-94067 Msa1390800:CDS 25.0%
! CATATCCATAATTTACTCAT+GGG - tig0021384:94049-94068 Msa1390800:CDS 25.0%
!! TAAAATTTGAGGTGAAGAAA+GGG + tig0021384:94159-94178 None:intergenic 25.0%
!! ATAAAATTTGAGGTGAAGAA+AGG + tig0021384:94160-94179 None:intergenic 25.0%
! TGTTTGAAGATCTTTGAATT+TGG - tig0021384:94285-94304 Msa1390800:CDS 25.0%
! GTAGTTGCATAAACAAATAA+TGG - tig0021384:94564-94583 Msa1390800:CDS 25.0%
!! GTGTTTAAGGACATTTTTAA+AGG - tig0021384:94865-94884 Msa1390800:intron 25.0%
!! AACAAATGTGTTTGAGATAT+TGG + tig0021384:95001-95020 None:intergenic 25.0%
!! CTATATGTCTAGATTTTGAA+AGG + tig0021384:95101-95120 None:intergenic 25.0%
! ACAATAAACTCCAAATTAAG+TGG + tig0021384:95129-95148 None:intergenic 25.0%
! AACTATCAATCAAATACCAA+CGG + tig0021384:95602-95621 None:intergenic 25.0%
!! AACCTTTTAAGCTTCTTATT+TGG + tig0021384:96295-96314 None:intergenic 25.0%
! AGCTTAAAAGGTTTAATGTT+TGG - tig0021384:96302-96321 Msa1390800:intron 25.0%
! TTTGTTAAAATTGAAGCAGA+TGG - tig0021384:96331-96350 Msa1390800:intron 25.0%
! TTTCATAATCAAAGGACATT+TGG + tig0021384:91911-91930 None:intergenic 25.0%
! ATACGAGATTTCATAATCAA+AGG + tig0021384:91919-91938 None:intergenic 25.0%
! ACCTCAAAAAAATTGATCAT+AGG - tig0021384:96482-96501 Msa1390800:intron 25.0%
!!! TCCTATGATCAATTTTTTTG+AGG + tig0021384:96486-96505 None:intergenic 25.0%
! CAAAAAAATTGATCATAGGA+TGG - tig0021384:96486-96505 Msa1390800:intron 25.0%
! CTCATTAAAAGAAGCAAATT+TGG + tig0021384:96593-96612 None:intergenic 25.0%
!!! CAAATTTGCTTCTTTTAATG+AGG - tig0021384:96591-96610 Msa1390800:intron 25.0%
!! TACTTTAACAGCTCATTTTA+TGG - tig0021384:96768-96787 Msa1390800:intron 25.0%
! AGTAGATTCAGAAATTATGT+TGG + tig0021384:97409-97428 None:intergenic 25.0%
! TCTAAATAAGTATGCAATGT+AGG + tig0021384:97435-97454 None:intergenic 25.0%
! AAGTATCTGTACGAAAAATT+AGG - tig0021384:97627-97646 Msa1390800:CDS 25.0%
! TTGCGATAAAATTTACCAAT+AGG + tig0021384:98216-98235 None:intergenic 25.0%
!!! AATCTTCAGTTTTGTTTTCA+TGG + tig0021384:98408-98427 None:intergenic 25.0%
! AAAACTGAAGATTCATAGAT+TGG - tig0021384:98415-98434 Msa1390800:CDS 25.0%
! GTGTTTATAATCTTCAGATA+CGG - tig0021384:98735-98754 Msa1390800:CDS 25.0%
!!! TGAAAATTTTGGTACATACT+AGG - tig0021384:98916-98935 Msa1390800:CDS 25.0%
!!! GAAAATTTTGGTACATACTA+GGG - tig0021384:98917-98936 Msa1390800:CDS 25.0%
TTGTTGAGTGGGATAAATTT+AGG - tig0021384:92031-92050 Msa1390800:three_prime_UTR 30.0%
TGTTGAGTGGGATAAATTTA+GGG - tig0021384:92032-92051 Msa1390800:three_prime_UTR 30.0%
CTCATTATGAGAAGCAAATT+TGG + tig0021384:92064-92083 None:intergenic 30.0%
! CAAATTTGCTTCTCATAATG+AGG - tig0021384:92062-92081 Msa1390800:three_prime_UTR 30.0%
GCTCAATTTCTTTCTAGATA+TGG - tig0021384:92084-92103 Msa1390800:three_prime_UTR 30.0%
TACTTTAACGGCTCATTATA+TGG - tig0021384:92239-92258 Msa1390800:three_prime_UTR 30.0%
CTCATTATATGGATGATCAA+TGG - tig0021384:92250-92269 Msa1390800:three_prime_UTR 30.0%
AGCTCAAAATTATCATGTGA+TGG + tig0021384:92315-92334 None:intergenic 30.0%
! TAATTTTGAGCTATCAAGGA+AGG - tig0021384:92323-92342 Msa1390800:three_prime_UTR 30.0%
! TGATTGGTTATTTACAGGAA+TGG - tig0021384:92346-92365 Msa1390800:three_prime_UTR 30.0%
! GATTGGTTATTTACAGGAAT+GGG - tig0021384:92347-92366 Msa1390800:three_prime_UTR 30.0%
TTAAACTCTCTTCAAGCTTA+AGG + tig0021384:92548-92567 None:intergenic 30.0%
TAAGCTTGAAGAGAGTTTAA+AGG - tig0021384:92548-92567 Msa1390800:intron 30.0%
AGTAGATTGAGAAGTAATAG+TGG + tig0021384:92880-92899 None:intergenic 30.0%
AAAAATTTGAACTTCAGACG+AGG + tig0021384:93077-93096 None:intergenic 30.0%
!! TCGTCTGAAGTTCAAATTTT+TGG - tig0021384:93076-93095 Msa1390800:CDS 30.0%
AACGTCAAGTAGTTTATATG+TGG - tig0021384:93211-93230 Msa1390800:CDS 30.0%
! TGAGTTGAAGTAGAAGAAAA+AGG + tig0021384:93242-93261 None:intergenic 30.0%
! TTTTTCTTCTACTTCAACTC+AGG - tig0021384:93241-93260 Msa1390800:CDS 30.0%
GAGTCAACTTGATCTTTATT+TGG - tig0021384:93427-93446 Msa1390800:CDS 30.0%
! TCTTTATTTGGAAGAGATAG+AGG - tig0021384:93439-93458 Msa1390800:CDS 30.0%
! CTTTATTTGGAAGAGATAGA+GGG - tig0021384:93440-93459 Msa1390800:CDS 30.0%
TTGCACTTCCAATATTCTAA+AGG + tig0021384:93479-93498 None:intergenic 30.0%
! TTAGAATATTGGAAGTGCAA+AGG - tig0021384:93479-93498 Msa1390800:CDS 30.0%
AAGTGCAAAGGTCATAAATA+TGG - tig0021384:93491-93510 Msa1390800:CDS 30.0%
ATATGGTATTCTTGAAAGGA+TGG - tig0021384:93508-93527 Msa1390800:CDS 30.0%
GTTGTTCAAGATTTACCATT+AGG + tig0021384:93686-93705 None:intergenic 30.0%
AGTGAGGAAACAAGAAAAAT+TGG - tig0021384:93806-93825 Msa1390800:CDS 30.0%
ATCTATAAATCTGCGATAAC+TGG + tig0021384:93932-93951 None:intergenic 30.0%
GAAAACCCATGAGTAAATTA+TGG + tig0021384:94057-94076 None:intergenic 30.0%
TACTAATCAACTAAAAGGAG+AGG + tig0021384:94097-94116 None:intergenic 30.0%
ATGCAGACAAAGAAAATCAA+AGG + tig0021384:94219-94238 None:intergenic 30.0%
TTCAGCTAGAACATAGTATT+CGG - tig0021384:94255-94274 Msa1390800:CDS 30.0%
! AGATCTTTGAATTTGGTAAC+TGG - tig0021384:94292-94311 Msa1390800:CDS 30.0%
GAACTACTTATTCAAAGCTT+GGG - tig0021384:94407-94426 Msa1390800:CDS 30.0%
AACTACTTATTCAAAGCTTG+GGG - tig0021384:94408-94427 Msa1390800:CDS 30.0%
GGGAGAATATAAATGATACA+TGG - tig0021384:94428-94447 Msa1390800:CDS 30.0%
!! GAATCATCGTTTAATTTGCA+TGG - tig0021384:94586-94605 Msa1390800:intron 30.0%
! ATTGGTTCAACAATCAAAAG+AGG + tig0021384:94983-95002 None:intergenic 30.0%
TATAGTTCCACCACTTAATT+TGG - tig0021384:95116-95135 Msa1390800:intron 30.0%
ATAAACTCCAAATTAAGTGG+TGG + tig0021384:95126-95145 None:intergenic 30.0%
!!! CTAGTTTTTAGTTTACTAGG+AGG + tig0021384:95198-95217 None:intergenic 30.0%
!!! GCTCTAGTTTTTAGTTTACT+AGG + tig0021384:95201-95220 None:intergenic 30.0%
CCGAACAAAACAAAAAAAGT+GGG + tig0021384:95677-95696 None:intergenic 30.0%
!!! CCCACTTTTTTTGTTTTGTT+CGG - tig0021384:95674-95693 Msa1390800:intron 30.0%
!!! CCACTTTTTTTGTTTTGTTC+GGG - tig0021384:95675-95694 Msa1390800:intron 30.0%
TCATGTGAATGGATAAAATC+CGG + tig0021384:95789-95808 None:intergenic 30.0%
AATCAAACCACATGCTTAAA+AGG - tig0021384:95815-95834 Msa1390800:intron 30.0%
ATCAAACCACATGCTTAAAA+GGG - tig0021384:95816-95835 Msa1390800:intron 30.0%
AGCAAGTAAAATTAATCCTC+AGG - tig0021384:96104-96123 Msa1390800:intron 30.0%
GCAAGTAAAATTAATCCTCA+GGG - tig0021384:96105-96124 Msa1390800:intron 30.0%
!! CTTTTAAGCTTCTTATTTGG+TGG + tig0021384:96292-96311 None:intergenic 30.0%
CACCAAATAAGAAGCTTAAA+AGG - tig0021384:96290-96309 Msa1390800:intron 30.0%
ATGTGTGAATGTAAAACTTG+TGG - tig0021384:96361-96380 Msa1390800:intron 30.0%
TGTGTGAATGTAAAACTTGT+GGG - tig0021384:96362-96381 Msa1390800:intron 30.0%
! AAGGACATTTGGTAATATGT+TGG + tig0021384:96429-96448 None:intergenic 30.0%
!!! TTTTTTGAGGTTGAAATGCT+TGG + tig0021384:96473-96492 None:intergenic 30.0%
GAAAGTTTACTTGCTTGAAA+AGG - tig0021384:92125-92144 Msa1390800:three_prime_UTR 30.0%
GGATAAATTGAAAAAACAGC+TGG - tig0021384:96675-96694 Msa1390800:intron 30.0%
AATATAACCATGAGAAGAAG+CGG + tig0021384:96749-96768 None:intergenic 30.0%
! CTCATTTTATGGATGATCAA+TGG - tig0021384:96779-96798 Msa1390800:intron 30.0%
TATGGATGATCAATGGAATT+TGG - tig0021384:96786-96805 Msa1390800:intron 30.0%
!!! ATGATAGTTTTGAGCTATCA+AGG - tig0021384:96848-96867 Msa1390800:intron 30.0%
!!! TTGATTTTTCAAGTTTTGCG+AGG + tig0021384:96959-96978 None:intergenic 30.0%
TTAAACTCTCTTCAACCATA+AGG + tig0021384:97077-97096 None:intergenic 30.0%
TATGGTTGAAGAGAGTTTAA+AGG - tig0021384:97077-97096 Msa1390800:intron 30.0%
ATAAGTAGAAACCCATTTAC+CGG + tig0021384:97241-97260 None:intergenic 30.0%
ATTTAAACCCATGTGTTCAA+AGG + tig0021384:97298-97317 None:intergenic 30.0%
AGATGACAAGATAAGAGATA+TGG - tig0021384:97503-97522 Msa1390800:intron 30.0%
! TATAGCATGATTCTTGCTTT+TGG - tig0021384:97567-97586 Msa1390800:CDS 30.0%
TACAGAGACAGTAAAAGATA+AGG - tig0021384:97656-97675 Msa1390800:CDS 30.0%
TGAAATTGATGCAACTTTGT+TGG + tig0021384:97727-97746 None:intergenic 30.0%
TTTCAATTAGATTACCTGTG+AGG - tig0021384:97742-97761 Msa1390800:CDS 30.0%
TTCAATTAGATTACCTGTGA+GGG - tig0021384:97743-97762 Msa1390800:CDS 30.0%
GTCATAGGAATATGTTGAAA+AGG - tig0021384:97903-97922 Msa1390800:CDS 30.0%
!! AAGAGTATTATATCCTTGCA+AGG - tig0021384:98034-98053 Msa1390800:CDS 30.0%
TGCTCTCATAATTGGTTATT+TGG - tig0021384:98183-98202 Msa1390800:CDS 30.0%
TATCAACACACAGATCAATT+TGG - tig0021384:98313-98332 Msa1390800:CDS 30.0%
ATTGAGGAGACAAGAAAAAT+TGG - tig0021384:98343-98362 Msa1390800:CDS 30.0%
AGAAGTTGTCACAAATTAGT+TGG + tig0021384:98541-98560 None:intergenic 30.0%
CTCGACATATAATATGTAGT+TGG - tig0021384:98713-98732 Msa1390800:CDS 30.0%
ATACAAAATCCTAGAACTTC+TGG + tig0021384:98784-98803 None:intergenic 30.0%
!!! AGAAGTTCTAGGATTTTGTA+TGG - tig0021384:98783-98802 Msa1390800:CDS 30.0%
!!! GAAGTTCTAGGATTTTGTAT+GGG - tig0021384:98784-98803 Msa1390800:CDS 30.0%
! TTTTTCTTTTTTCCTCCCAA+AGG - tig0021384:98808-98827 Msa1390800:CDS 30.0%
ATGTGTGAATGTATGACTTG+TGG - tig0021384:91829-91848 Msa1390800:three_prime_UTR 35.0%
! TGTGTGAATGTATGACTTGT+GGG - tig0021384:91830-91849 Msa1390800:three_prime_UTR 35.0%
TGTGGGAAACTATTTACTTG+TGG - tig0021384:91847-91866 Msa1390800:three_prime_UTR 35.0%
AAGGACATTTGGGAATATGT+TGG + tig0021384:91900-91919 None:intergenic 35.0%
CAAAGAGCTCAATCATAACA+TGG - tig0021384:91957-91976 Msa1390800:three_prime_UTR 35.0%
ATCATAACATGGTTCGTGAA+TGG - tig0021384:91968-91987 Msa1390800:three_prime_UTR 35.0%
TTCCATTTCACTTTGTTGAG+TGG - tig0021384:92019-92038 Msa1390800:three_prime_UTR 35.0%
TCCATTTCACTTTGTTGAGT+GGG - tig0021384:92020-92039 Msa1390800:three_prime_UTR 35.0%
AAACTGAAAAAACAGCTAGC+TGG - tig0021384:92150-92169 Msa1390800:three_prime_UTR 35.0%
!! TGTGTTTGAGTTTTCGTTGT+TGG - tig0021384:92187-92206 Msa1390800:three_prime_UTR 35.0%
AATATAGCTACGAGAAGAAG+TGG + tig0021384:92220-92239 None:intergenic 35.0%
! GAAGGTGATTGGTTATTTAC+AGG - tig0021384:92341-92360 Msa1390800:three_prime_UTR 35.0%
GATAATGATCCAGCTAATGA+TGG - tig0021384:92402-92421 Msa1390800:CDS 35.0%
AAAGGTAGTAAGTGACGTAT+TGG - tig0021384:92566-92585 Msa1390800:intron 35.0%
GTGACGTATTGGAAAAGATA+AGG - tig0021384:92577-92596 Msa1390800:intron 35.0%
TGTCAATGTGTTGAAGAAGT+TGG - tig0021384:92648-92667 Msa1390800:CDS 35.0%
ATAAGTAGAGACCCATTTAC+CGG + tig0021384:92712-92731 None:intergenic 35.0%
TACGGAGACAGTAAAAGATA+AGG - tig0021384:93127-93146 Msa1390800:CDS 35.0%
! AGGCAAGAAAAGTATGTAGA+TGG - tig0021384:93401-93420 Msa1390800:CDS 35.0%
TCTGATGCAACTGTGATTAT+TGG + tig0021384:93554-93573 None:intergenic 35.0%
TCTCCCATAACTGGTTATTT+GGG - tig0021384:93654-93673 Msa1390800:CDS 35.0%
GAACCCAAATAACCAGTTAT+GGG + tig0021384:93660-93679 None:intergenic 35.0%
TGAACCCAAATAACCAGTTA+TGG + tig0021384:93661-93680 None:intergenic 35.0%
! TTATTTGGGTTCACACCTAA+TGG - tig0021384:93668-93687 Msa1390800:CDS 35.0%
!!! AATCTTCAGTTTTGTTCTCG+TGG + tig0021384:93871-93890 None:intergenic 35.0%
CTGAAGATTGATAGATTGGA+AGG - tig0021384:93882-93901 Msa1390800:CDS 35.0%
! AGCTGAAGTATTCATTTCTC+AGG + tig0021384:94242-94261 None:intergenic 35.0%
TACACTGATGTATTCTTGCA+TGG - tig0021384:94325-94344 Msa1390800:CDS 35.0%
!!! TTTTTAGAGGCATTCTCTGT+TGG - tig0021384:94379-94398 Msa1390800:CDS 35.0%
GGAACTACTTATTCAAAGCT+TGG - tig0021384:94406-94425 Msa1390800:CDS 35.0%
! GGTATTGTTGACATTTTCAG+TGG + tig0021384:94487-94506 None:intergenic 35.0%
! CCTATGGTCAATTTAAGACA+TGG + tig0021384:94530-94549 None:intergenic 35.0%
CCATGTCTTAAATTGACCAT+AGG - tig0021384:94527-94546 Msa1390800:CDS 35.0%
TTTATGCAACTACCGACAAA+AGG + tig0021384:94557-94576 None:intergenic 35.0%
!! TAATTTGCATGGCAGGTTTT+TGG - tig0021384:94597-94616 Msa1390800:intron 35.0%
TTATTACAAGCACGTTTCTC+AGG + tig0021384:94698-94717 None:intergenic 35.0%
! ACGAGGAACGTAAATTTTCT+TGG - tig0021384:94727-94746 Msa1390800:intron 35.0%
! GTCTGACATCAACGTTTTAA+AGG - tig0021384:94830-94849 Msa1390800:intron 35.0%
!! GTTTTGTTGACGAGTGTTTA+AGG - tig0021384:94852-94871 Msa1390800:intron 35.0%
! CAAGAGTATGAATTCGAAGA+AGG + tig0021384:95050-95069 None:intergenic 35.0%
! CATACTCTTGAGTGTACTTT+TGG - tig0021384:95060-95079 Msa1390800:intron 35.0%
TATTTCTTAGTTACTGCACG+TGG + tig0021384:95322-95341 None:intergenic 35.0%
CGTGCAGTAACTAAGAAATA+TGG - tig0021384:95322-95341 Msa1390800:intron 35.0%
GCAGTAACTAAGAAATATGG+AGG - tig0021384:95325-95344 Msa1390800:intron 35.0%
TAGAAAGAAAGATGAAACCG+TGG - tig0021384:95418-95437 Msa1390800:intron 35.0%
TTGTTTGTTTACAGCAACCA+CGG + tig0021384:95438-95457 None:intergenic 35.0%
TTCAAGCAACTAATCGCAAT+CGG + tig0021384:95639-95658 None:intergenic 35.0%
CCCGAACAAAACAAAAAAAG+TGG + tig0021384:95678-95697 None:intergenic 35.0%
AGAGATTATTCACTGCTAAG+CGG + tig0021384:95731-95750 None:intergenic 35.0%
TAGCAGTGAATAATCTCTGT+CGG - tig0021384:95733-95752 Msa1390800:intron 35.0%
TAAGCATGTGGTTTGATTCT+TGG + tig0021384:95813-95832 None:intergenic 35.0%
!! AACAATGGATTAGTCCAAAG+TGG + tig0021384:95855-95874 None:intergenic 35.0%
ACTTTGGACTAATCCATTGT+TGG - tig0021384:95854-95873 Msa1390800:intron 35.0%
TCTTCTTCTCTACATCACAA+CGG + tig0021384:95984-96003 None:intergenic 35.0%
AGAAGATGAAATGTTAGCTG+AGG - tig0021384:95998-96017 Msa1390800:intron 35.0%
GAAGATGAAATGTTAGCTGA+GGG - tig0021384:95999-96018 Msa1390800:intron 35.0%
GCTATACACGATAATGAGTT+TGG - tig0021384:96146-96165 Msa1390800:intron 35.0%
! ACGATAATGAGTTTGGAATG+TGG - tig0021384:96153-96172 Msa1390800:intron 35.0%
TGTGGGAAACAGTTTATTTC+TGG - tig0021384:96379-96398 Msa1390800:intron 35.0%
!! GGAAACAGTTTATTTCTGGA+AGG - tig0021384:96383-96402 Msa1390800:intron 35.0%
!! TTCCATTTCAGTTTGTTGAG+TGG - tig0021384:96548-96567 Msa1390800:intron 35.0%
!! TCCATTTCAGTTTGTTGAGT+GGG - tig0021384:96549-96568 Msa1390800:intron 35.0%
TTGTTGAGTGGGATGAATTT+AGG - tig0021384:96560-96579 Msa1390800:intron 35.0%
TGTTGAGTGGGATGAATTTA+GGG - tig0021384:96561-96580 Msa1390800:intron 35.0%
TGTGTTTGAGCTTTCATTGT+TGG - tig0021384:96716-96735 Msa1390800:intron 35.0%
GCTCAAAACTATCATGTGAA+GGG + tig0021384:96843-96862 None:intergenic 35.0%
AGCTCAAAACTATCATGTGA+AGG + tig0021384:96844-96863 None:intergenic 35.0%
!!! TAGTTTTGAGCTATCAAGGA+AGG - tig0021384:96852-96871 Msa1390800:intron 35.0%
TGATTGATTGTTTGCAGGAA+TGG - tig0021384:96875-96894 Msa1390800:intron 35.0%
GATTGATTGTTTGCAGGAAT+GGG - tig0021384:96876-96895 Msa1390800:intron 35.0%
ATTGATTGTTTGCAGGAATG+GGG - tig0021384:96877-96896 Msa1390800:intron 35.0%
GAGAGTTTAAAGGTAGTAAG+TGG - tig0021384:92558-92577 Msa1390800:intron 35.0%
AAAGGTAGTAAGTGGTGTAT+TGG - tig0021384:97095-97114 Msa1390800:intron 35.0%
CAATGTGTTGAAGAAGTTGA+TGG - tig0021384:97180-97199 Msa1390800:intron 35.0%
AAAGATTCGAACTTCAAACG+AGG + tig0021384:97606-97625 None:intergenic 35.0%
AGGAATATGTTGAAAAGGAG+AGG - tig0021384:97908-97927 Msa1390800:CDS 35.0%
TATTTGAAAGAGAGAGACAG+AGG - tig0021384:97970-97989 Msa1390800:CDS 35.0%
GTATTATATCCTTGCAAGGT+TGG - tig0021384:98038-98057 Msa1390800:CDS 35.0%
TTGTTCAAAATACAGTTGCC+AGG + tig0021384:98120-98139 None:intergenic 35.0%
! TTATTTGGCTTCTCACCTAT+TGG - tig0021384:98198-98217 Msa1390800:CDS 35.0%
CTGAAGATTCATAGATTGGA+AGG - tig0021384:98419-98438 Msa1390800:CDS 35.0%
AGAGAGAGAGAGAGAAAAAA+AGG + tig0021384:98612-98631 None:intergenic 35.0%
GTCACAAAAGTTGTCTCAAA+TGG - tig0021384:98673-98692 Msa1390800:CDS 35.0%
CGGTTGTATTTGATCAAACA+TGG - tig0021384:98755-98774 Msa1390800:CDS 35.0%
! TTTGTTTGCTGGGATCATTT+AGG + tig0021384:98893-98912 None:intergenic 35.0%
GGGAAACTATTTACTTGTGG+CGG - tig0021384:91850-91869 Msa1390800:three_prime_UTR 40.0%
TCCCACTCAACAAAGTGAAA+TGG + tig0021384:92024-92043 None:intergenic 40.0%
AAACAGCTAGCTGGAATAGA+AGG - tig0021384:92159-92178 Msa1390800:three_prime_UTR 40.0%
! TAAGTGTTGTGCTCATGTCT+TGG - tig0021384:92521-92540 Msa1390800:intron 40.0%
TTGTGAGTGTGTCAAACTCT+AGG - tig0021384:92613-92632 Msa1390800:CDS 40.0%
CAATGTGTTGAAGAAGTTGG+TGG - tig0021384:92651-92670 Msa1390800:CDS 40.0%
ATTTGGATGTGTCCGGTAAA+TGG - tig0021384:92697-92716 Msa1390800:CDS 40.0%
TTTGGATGTGTCCGGTAAAT+GGG - tig0021384:92698-92717 Msa1390800:CDS 40.0%
TTTCCCACTCTTCACTTGAT+GGG + tig0021384:92812-92831 None:intergenic 40.0%
ACAAAATGAGTATGGGACGT+AGG + tig0021384:92906-92925 None:intergenic 40.0%
AGATGACACGATAAGAGACA+TGG - tig0021384:92974-92993 Msa1390800:intron 40.0%
! TGACGTTGATGCACTTTTGT+CGG + tig0021384:93198-93217 None:intergenic 40.0%
CTTCTACTTCAACTCAGGAT+TGG - tig0021384:93246-93265 Msa1390800:CDS 40.0%
TTCAACTCAGGATTGGAATC+TGG - tig0021384:93253-93272 Msa1390800:CDS 40.0%
!! TCAGAATCCACTTTTAGTCC+TGG - tig0021384:93569-93588 Msa1390800:CDS 40.0%
TTGTTCAAAATACTGCTGCC+AGG + tig0021384:93590-93609 None:intergenic 40.0%
CTCTCCCATAACTGGTTATT+TGG - tig0021384:93653-93672 Msa1390800:CDS 40.0%
ATGAAATACCTGCAACTGCA+TGG - tig0021384:94132-94151 Msa1390800:CDS 40.0%
! TTGTTGACATTTTCAGTGGC+AGG + tig0021384:94483-94502 None:intergenic 40.0%
! ACCATAGGAACACCTTTTGT+CGG - tig0021384:94542-94561 Msa1390800:CDS 40.0%
!! CATCGTTTAATTTGCATGGC+AGG - tig0021384:94590-94609 Msa1390800:intron 40.0%
CGTTGATGTCAGACATTTGA+AGG + tig0021384:94824-94843 None:intergenic 40.0%
TGAGAGAAGCAGTGAAAATG+AGG + tig0021384:95468-95487 None:intergenic 40.0%
TTGTTCGGGTCACATGATAT+TGG - tig0021384:95689-95708 Msa1390800:intron 40.0%
AATCTCTGTCGGAGAATACA+TGG - tig0021384:95744-95763 Msa1390800:intron 40.0%
ATCTCTGTCGGAGAATACAT+GGG - tig0021384:95745-95764 Msa1390800:intron 40.0%
TGATTCTTGGCTCATGTGAA+TGG + tig0021384:95800-95819 None:intergenic 40.0%
! TTTGGACCCTTTTAAGCATG+TGG + tig0021384:95825-95844 None:intergenic 40.0%
!! GGATTAGTCCAAAGTGGTAA+GGG + tig0021384:95849-95868 None:intergenic 40.0%
!! TGGATTAGTCCAAAGTGGTA+AGG + tig0021384:95850-95869 None:intergenic 40.0%
ATACAAAAACGACAACCCTG+AGG + tig0021384:96123-96142 None:intergenic 40.0%
TATTGGTGAGAGCTGTAACT+CGG - tig0021384:96243-96262 Msa1390800:intron 40.0%
TGTAACTCGGCATATTCTGA+TGG - tig0021384:96256-96275 Msa1390800:intron 40.0%
!! CAGTTTATTTCTGGAAGGAC+AGG - tig0021384:96388-96407 Msa1390800:intron 40.0%
TCATAGGATGGTTCGTGATT+CGG - tig0021384:96498-96517 Msa1390800:intron 40.0%
TCCCACTCAACAAACTGAAA+TGG + tig0021384:96553-96572 None:intergenic 40.0%
GAAGGTGATTGATTGTTTGC+AGG - tig0021384:96870-96889 Msa1390800:intron 40.0%
GTGGTGTATTGGACAAGATA+AGG - tig0021384:97106-97125 Msa1390800:intron 40.0%
ATGTGAGTGTGTCAAACTCT+AGG - tig0021384:97142-97161 Msa1390800:intron 40.0%
AAGATAAGGTGAGCAATGTG+AGG - tig0021384:97670-97689 Msa1390800:CDS 40.0%
! GGGATTCTCGTTTTACTTCT+CGG - tig0021384:97763-97782 Msa1390800:CDS 40.0%
! GGATTCTCGTTTTACTTCTC+GGG - tig0021384:97764-97783 Msa1390800:CDS 40.0%
! AAGGAAGACAGACTTGCTTT+CGG - tig0021384:97788-97807 Msa1390800:CDS 40.0%
CTGATGCTACTGCGATTAAT+GGG + tig0021384:98083-98102 None:intergenic 40.0%
TCTGATGCTACTGCGATTAA+TGG + tig0021384:98084-98103 None:intergenic 40.0%
! TCAGAATCTCCTTTTAGTCC+TGG - tig0021384:98099-98118 Msa1390800:CDS 40.0%
ATACAGTTGCCAGGACTAAA+AGG + tig0021384:98111-98130 None:intergenic 40.0%
CTCTCGTATGCTCTCATAAT+TGG - tig0021384:98175-98194 Msa1390800:CDS 40.0%
TCAATTTGGAGACGAGATTG+AGG - tig0021384:98327-98346 Msa1390800:CDS 40.0%
GATTGGAAGGACAACTGATT+TGG - tig0021384:98432-98451 Msa1390800:CDS 40.0%
!! TGCAGACTTGTTACTTGATG+TGG - tig0021384:98471-98490 Msa1390800:CDS 40.0%
!!! GTGGCTACTGATTTTCTGTT+TGG - tig0021384:98490-98509 Msa1390800:CDS 40.0%
ACATGGATTCCAGAAGTTCT+AGG - tig0021384:98772-98791 Msa1390800:CDS 40.0%
! TTCACCCATATCTAGCCTTT+GGG + tig0021384:98826-98845 None:intergenic 40.0%
! TTTACTTGTGGCGGAAGATC+AGG - tig0021384:91859-91878 Msa1390800:three_prime_UTR 45.0%
GAGCTATCAAGGAAGGTGAT+TGG - tig0021384:92330-92349 Msa1390800:three_prime_UTR 45.0%
!! TGTGTTGAAGAAGTTGGTGG+CGG - tig0021384:92654-92673 Msa1390800:CDS 45.0%
CACATCCAAATGCAAGCCAT+CGG + tig0021384:92688-92707 None:intergenic 45.0%
CTTTCCCACTCTTCACTTGA+TGG + tig0021384:92813-92832 None:intergenic 45.0%
TCAAGTGAAGAGTGGGAAAG+AGG - tig0021384:92813-92832 Msa1390800:CDS 45.0%
! TTTTGTTCTCGTGGACGCAA+TGG + tig0021384:93862-93881 None:intergenic 45.0%
!! TTAGAGGCATTCTCTGTTGG+AGG - tig0021384:94382-94401 Msa1390800:CDS 45.0%
! GACATTTTCAGTGGCAGGAA+AGG + tig0021384:94478-94497 None:intergenic 45.0%
!! ACCGACAAAAGGTGTTCCTA+TGG + tig0021384:94546-94565 None:intergenic 45.0%
!! ACGTTTCTCAGGTTGAAGCA+TGG + tig0021384:94687-94706 None:intergenic 45.0%
GAGAAGCAGTGAAAATGAGG+AGG + tig0021384:95465-95484 None:intergenic 45.0%
GATTATTCACTGCTAAGCGG+CGG + tig0021384:95728-95747 None:intergenic 45.0%
GAGAATACATGGGACACACA+AGG - tig0021384:95755-95774 Msa1390800:intron 45.0%
AATACATGGGACACACAAGG+TGG - tig0021384:95758-95777 Msa1390800:intron 45.0%
ATACATGGGACACACAAGGT+GGG - tig0021384:95759-95778 Msa1390800:intron 45.0%
GTCCAAATCCCTTACCACTT+TGG - tig0021384:95838-95857 Msa1390800:intron 45.0%
GTCCAAAGTGGTAAGGGATT+TGG + tig0021384:95843-95862 None:intergenic 45.0%
TGGGACTAAGCAACCAACAA+TGG + tig0021384:95870-95889 None:intergenic 45.0%
AAAACAGCTGGCTGCAGTTA+AGG - tig0021384:96687-96706 Msa1390800:intron 45.0%
AAACAGCTGGCTGCAGTTAA+GGG - tig0021384:96688-96707 Msa1390800:intron 45.0%
ACTTCTTCCGCTTCTTCTCA+TGG - tig0021384:96739-96758 Msa1390800:intron 45.0%
! TAAGTGTTGTGCTCGTGTCT+TGG - tig0021384:97050-97069 Msa1390800:intron 45.0%
ATGTGGATGTGTCCGGTAAA+TGG - tig0021384:97226-97245 Msa1390800:CDS 45.0%
TGTGGATGTGTCCGGTAAAT+GGG - tig0021384:97227-97246 Msa1390800:CDS 45.0%
TTTCCCACTCTTCACTGGAT+GGG + tig0021384:97341-97360 None:intergenic 45.0%
GTAAAACGAGAATCCCTCAC+AGG + tig0021384:97759-97778 None:intergenic 45.0%
! CTCGTTTTACTTCTCGGGAA+AGG - tig0021384:97769-97788 Msa1390800:CDS 45.0%
GAGAGGCTAGAAAGATATGC+AGG - tig0021384:97925-97944 Msa1390800:CDS 45.0%
AGGCTAGAAAGATATGCAGG+TGG - tig0021384:97928-97947 Msa1390800:CDS 45.0%
! ATATCCTTGCAAGGTTGGCT+AGG - tig0021384:98043-98062 Msa1390800:CDS 45.0%
! TATCCTTGCAAGGTTGGCTA+GGG - tig0021384:98044-98063 Msa1390800:CDS 45.0%
!! GGAAGGACAACTGATTTGGT+TGG - tig0021384:98436-98455 Msa1390800:CDS 45.0%
TTCCTCCCAAAGGCTAGATA+TGG - tig0021384:98818-98837 Msa1390800:CDS 45.0%
TCCTCCCAAAGGCTAGATAT+GGG - tig0021384:98819-98838 Msa1390800:CDS 45.0%
! CTTCACCCATATCTAGCCTT+TGG + tig0021384:98827-98846 None:intergenic 45.0%
TGGGATCATTTAGGCACACA+AGG + tig0021384:98884-98903 None:intergenic 45.0%
!!! TTTTATCATTATATTAATAA+TGG - tig0021384:98285-98304 Msa1390800:CDS 5.0%
TGCGAGTTGCCATCATTAGC+TGG + tig0021384:92414-92433 None:intergenic 50.0%
GGCTTGCATTTGGATGTGTC+CGG - tig0021384:92690-92709 Msa1390800:CDS 50.0%
ACTGCCCATCAAGTGAAGAG+TGG - tig0021384:92805-92824 Msa1390800:CDS 50.0%
CTGCCCATCAAGTGAAGAGT+GGG - tig0021384:92806-92825 Msa1390800:CDS 50.0%
AAGATAAGGTGAGCAGTGCG+AGG - tig0021384:93141-93160 Msa1390800:CDS 50.0%
ACTGCTGCCAGGACTAAAAG+TGG + tig0021384:93579-93598 None:intergenic 50.0%
CTCTCGTACTCTCCCATAAC+TGG - tig0021384:93645-93664 Msa1390800:CDS 50.0%
TCAATTCGGAGATGCGAGTG+AGG - tig0021384:93790-93809 Msa1390800:CDS 50.0%
! CTCGCTAGTGGGGAATTTTC+GGG + tig0021384:95387-95406 None:intergenic 50.0%
! GCTCGCTAGTGGGGAATTTT+CGG + tig0021384:95388-95407 None:intergenic 50.0%
GAAAATTCCCCACTAGCGAG+CGG - tig0021384:95387-95406 Msa1390800:intron 50.0%
AAAATTCCCCACTAGCGAGC+GGG - tig0021384:95388-95407 Msa1390800:intron 50.0%
CTTCTCTCACTCTCACTCTC+AGG - tig0021384:95479-95498 Msa1390800:intron 50.0%
TGCGGTTATTGTGTTGCCGT+TGG - tig0021384:95583-95602 Msa1390800:intron 50.0%
TGCTCGTGTCTTGGACCTTA+TGG - tig0021384:97059-97078 Msa1390800:intron 50.0%
TCGCAGTGCCTTTGAACACA+TGG - tig0021384:92758-92777 Msa1390800:CDS 50.0%
CGCAGTGCCTTTGAACACAT+GGG - tig0021384:92759-92778 Msa1390800:CDS 50.0%
ATTGCCCATCCAGTGAAGAG+TGG - tig0021384:97334-97353 Msa1390800:CDS 50.0%
TTGCCCATCCAGTGAAGAGT+GGG - tig0021384:97335-97354 Msa1390800:CDS 50.0%
CTTTCCCACTCTTCACTGGA+TGG + tig0021384:97342-97361 None:intergenic 50.0%
TCCAGTGAAGAGTGGGAAAG+AGG - tig0021384:97342-97361 Msa1390800:CDS 50.0%
TCCTCTTTCCCACTCTTCAC+TGG + tig0021384:92817-92836 None:intergenic 50.0%
! ACCCATATCTAGCCTTTGGG+AGG + tig0021384:98823-98842 None:intergenic 50.0%
!! GAAGAAGTTGGTGGCGGTGA+TGG - tig0021384:92660-92679 Msa1390800:CDS 55.0%
!! TGGCACCGATGGCTTGCATT+TGG - tig0021384:92680-92699 Msa1390800:CDS 55.0%
GAAAGGGACCATGCAGTTGC+AGG + tig0021384:94143-94162 None:intergenic 55.0%
! GAGGCATTCTCTGTTGGAGG+AGG - tig0021384:94385-94404 Msa1390800:CDS 55.0%
TATTCACTGCTAAGCGGCGG+TGG + tig0021384:95725-95744 None:intergenic 55.0%
! GACACACAAGGTGGGTTCTC+CGG - tig0021384:95767-95786 Msa1390800:intron 55.0%
GATGGCAGTGATAGCAGCGA+TGG - tig0021384:97198-97217 Msa1390800:intron 55.0%
! TAGCAGCGATGGCTTGCATG+TGG - tig0021384:97209-97228 Msa1390800:intron 55.0%
GGCTTGCATGTGGATGTGTC+CGG - tig0021384:97219-97238 Msa1390800:CDS 55.0%
CATCCCTAGCCAACCTTGCA+AGG + tig0021384:98050-98069 None:intergenic 55.0%
TTCCTTCCCGCTCGCTAGTG+GGG + tig0021384:95397-95416 None:intergenic 60.0%
CTTCCTTCCCGCTCGCTAGT+GGG + tig0021384:95398-95417 None:intergenic 60.0%
ACTTCCTTCCCGCTCGCTAG+TGG + tig0021384:95399-95418 None:intergenic 60.0%
CAGCTGGCTGCAGTTAAGGG+TGG - tig0021384:96691-96710 Msa1390800:intron 60.0%
TTCCCCACTAGCGAGCGGGA+AGG - tig0021384:95392-95411 Msa1390800:intron 65.0%
! GGTGGCGGTGATGGCACCGA+TGG - tig0021384:92669-92688 Msa1390800:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0021384 gene 91829 98990 91829 ID=Msa1390800;Name=Msa1390800
tig0021384 mRNA 91829 98990 91829 ID=Msa1390800-mRNA-1;Parent=Msa1390800;Name=Msa1390800-mRNA-1;_AED=0.57;_eAED=0.45;_QI=0|0.5|0.4|0.6|1|1|5|558|1232
tig0021384 exon 91829 92493 91829 ID=Msa1390800-mRNA-1:exon:12430;Parent=Msa1390800-mRNA-1
tig0021384 exon 92600 92909 92600 ID=Msa1390800-mRNA-1:exon:12429;Parent=Msa1390800-mRNA-1
tig0021384 exon 93001 94585 93001 ID=Msa1390800-mRNA-1:exon:12428;Parent=Msa1390800-mRNA-1
tig0021384 exon 97210 97436 97210 ID=Msa1390800-mRNA-1:exon:12427;Parent=Msa1390800-mRNA-1
tig0021384 exon 97521 98990 97521 ID=Msa1390800-mRNA-1:exon:12426;Parent=Msa1390800-mRNA-1
tig0021384 CDS 97521 98990 97521 ID=Msa1390800-mRNA-1:cds;Parent=Msa1390800-mRNA-1
tig0021384 CDS 97210 97436 97210 ID=Msa1390800-mRNA-1:cds;Parent=Msa1390800-mRNA-1
tig0021384 CDS 93001 94585 93001 ID=Msa1390800-mRNA-1:cds;Parent=Msa1390800-mRNA-1
tig0021384 CDS 92600 92909 92600 ID=Msa1390800-mRNA-1:cds;Parent=Msa1390800-mRNA-1
tig0021384 CDS 92387 92493 92387 ID=Msa1390800-mRNA-1:cds;Parent=Msa1390800-mRNA-1
tig0021384 three_prime_UTR 91829 92386 91829 ID=Msa1390800-mRNA-1:three_prime_utr;Parent=Msa1390800-mRNA-1
Gene Sequence

>Msa1390800

ATGTGTGAATGTATGACTTGTGGGAAACTATTTACTTGTGGCGGAAGATCAGGTATCTCTCATCTAATCCAACATATTCCCAAATGTCCTTTGATTATGAAATCTCGTATTGCTGAGTACTTCGAGCTCAAAGAGCTCAATCATAACATGGTTCGTGAATGGATGACTCAAATGACTATAAAACATCGTCTTCCATTTCACTTTGTTGAGTGGGATAAATTTAGGGCATTCACCAAATTTGCTTCTCATAATGAGGCTCAATTTCTTTCTAGATATGGTCTTGCTGATGATGTGATGAAAGTTTACTTGCTTGAAAAAGATAAACTGAAAAAACAGCTAGCTGGAATAGAAGGTAGAGTGTGTTTGAGTTTTCGTTGTTGGACTTCTTCCACTTCTTCTCGTAGCTATATTACTTTAACGGCTCATTATATGGATGATCAATGGAACTTGATTGTCAAATTGTTGAATTTTTGTCATTTGGAACCATCACATGATAATTTTGAGCTATCAAGGAAGGTGATTGGTTATTTACAGGAATGGGAAATAGAGAAAAATATTTTTTCTATTACTATGGATAATGATCCAGCTAATGATGGCAACTCGCAAAACTTGAAAGATCAACTTTGCTCGCTTGATAGTTTGTTGAGAACTTTCATCACATCAGCAACAGCACCATCTCTAGAAAAACATTTTAAGTGTTGTGCTCATGTCTTGGACCTTAAGCTTGAAGAGAGTTTAAAGGTAGTAAGTGACGTATTGGAAAAGATAAGGAACAGTTTAAAGTTTGTGAGTGTGTCAAACTCTAGGTTGAAACAATTTTGTCAATGTGTTGAAGAAGTTGGTGGCGGTGATGGCACCGATGGCTTGCATTTGGATGTGTCCGGTAAATGGGTCTCTACTTATCTGATGCTTAAGAGTGCAATCAAATATCGCAGTGCCTTTGAACACATGTGTTTAAAAGATACAACATATAATGACTGCCCATCAAGTGAAGAGTGGGAAAGAGGAGAGAAAATTTGTGAATTCTTGATGGTTTTTTATGGACTTGCCACTATTACTTCTCAATCTACTTATCCTACGTCCCATACTCATTTTGTTCATATTTTGGGGATAGAGTTTTCATTGAAAAAAATGATGTTGAGCGAAGATGACACGATAAGAGACATGGCTTCAAAGATGTTGAATGAGTTTGACAATTGTTTGAGTGAATATAGCGTGATTCTTGCACTTGTGTGTGTTTTAAATCCTCGTCTGAAGTTCAAATTTTTGGAGTATCTATACGAAAAATTAGGTTATGATACGGAGACAGTAAAAGATAAGGTGAGCAGTGCGAGGAAAGCTGTATATGCTCTTTTTAATGAATATGCCGACAAAAGTGCATCAACGTCAAGTAGTTTATATGTGGTGAATCCTTTTTCTTCTACTTCAACTCAGGATTGGAATCTGGAATTGTCTTTGAAAAAGTATTATGAATATCTTGAAATAAAGAGGCAAGAAAAGTATGTAGATGGTGTGAGTCAACTTGATCTTTATTTGGAAGAGATAGAGGGATATTATAAAAATCCTTTAGAATATTGGAAGTGCAAAGGTCATAAATATGGTATTCTTGAAAGGATGGCTAGAGATGTGTTTAGCATTCCAATAATCACAGTTGCATCAGAATCCACTTTTAGTCCTGGCAGCAGTATTTTGAACAATATGGATTTTATTGGTGAGAGCTGTAACTCGGCATATTCTGATGGTGATCATGAACCACCAAATAAGAAGCTTAAAAGGTTTAATGTTTGGAACTACTTTGTTAAAATTGAAGCAGATGGTAAAGAAATGTGTGAATGTAAAACTTGTGGGAAACAGTTTATTTCTGGAAGGACAGGTATATCTCATCTAAACCAACATATTACCAAATGTCCTTTGATTATGAAATCTCGTATTGCCAAGCATTTCAACCTCAAAAAAATTGATCATAGGATGGTTCGTGATTCGGTTACTCAAATGACTATAAAAAGTTGCATTCCATTTCAGTTTGTTGAGTGGGATGAATTTAGGGCATTTACCAAATTTGCTTCTTTTAATGAGGCTCGATTTCTTTCTAGAGATGCTGTTGTCGCTGATGTGATGAAAGTTTACTTGCTTGAAAAGGATAAATTGAAAAAACAGCTGGCTGCAGTTAAGGGTGGAGTGTGTTTGAGCTTTCATTGTTGGACTTCTTCCGCTTCTTCTCATGGTTATATTACTTTAACAGCTCATTTTATGGATGATCAATGGAATTTGGTTGTCAAACTGTTGAGTTTTTGTCATTTCAACCCTTCACATGATAGTTTTGAGCTATCAAGGAAGGTGATTGATTGTTTGCAGGAATGGGGAATAGAGAGAAATGTTTTTTCTATTACTATGGATAATGTTTCAGCTAATGATGAAACCTCGCAAAACTTGAAAAATCAACTTTGCTCGCTTGATAGTTTGTTGAGAACTTTCATCACATCAGCAACAGCACCATCTCTAGAAAAACATTTTAAGTGTTGTGCTCGTGTCTTGGACCTTATGGTTGAAGAGAGTTTAAAGGTAGTAAGTGGTGTATTGGACAAGATAAGGAACAGTTTGAAGTATGTGAGTGTGTCAAACTCTAGGTTGAAACAATTTTGTCAATGTGTTGAAGAAGTTGATGGCAGTGATAGCAGCGATGGCTTGCATGTGGATGTGTCCGGTAAATGGGTTTCTACTTATACGATGCTTAAGAATGCTATCAAATATCGCAGTGCCTTTGAACACATGGGTTTAAATGATACAACATATAGCGATTGCCCATCCAGTGAAGAGTGGGAAAGAGGAGAGAAGATATGTGCATTCTTGAATGATTTCTTTGAACTTACCAACATAATTTCTGAATCTACTCATCCTACATTGCATACTTATTTAGATCATATTTTGCGGATAGAGTTTTCGTTGAAAAAAATGATGTTGAACGAAGATGACAAGATAAGAGATATGGCTTCAAAGATGTCGAATGAGTTTGACAAGTATATGAGTGAATATAGCATGATTCTTGCTTTTGGTTGTGTTTTAGATCCTCGTTTGAAGTTCGAATCTTTGAAGTATCTGTACGAAAAATTAGGTCATGATACAGAGACAGTAAAAGATAAGGTGAGCAATGTGAGGAAAACTTTATATTCTCTTTTTAATGAATATGCCAACAAAGTTGCATCAATTTCAATTAGATTACCTGTGAGGGATTCTCGTTTTACTTCTCGGGAAAGGAAGACAGACTTGCTTTCGGAGTATCGTGAATATGTTGAAAAGGAGAGGCTAGAAAGATATGCAGGTGGTGTGACTCAACTTGATCTTTATTTGAAAGAGAGAGACAGAGGCTATTATGTAAATGCTTTACAATATTGGAAAGACAATGAGAAAGAGTATTATATCCTTGCAAGGTTGGCTAGGGATGTATTGAGTGTCCCATTAATCGCAGTAGCATCAGAATCTCCTTTTAGTCCTGGCAACTGTATTTTGAACAAGTATAGAAGTTGTATGTTTTCAGAAAATCTGCAAGCTCTCGTATGCTCTCATAATTGGTTATTTGGCTTCTCACCTATTGATCAATTTGGAGACGAGATTGAGGAGACAAGAAAAATTGGCAAAAATCTTTCTAAGCAAGTTTCAAAATGTCATTGCGTCCATGAAAACAAAACTGAAGATTCATAG
Protein sequence

>Msa1390800

MCECMTCGKLFTCGGRSGISHLIQHIPKCPLIMKSRIAEYFELKELNHNMVREWMTQMTIKHRLPFHFVEWDKFRAFTKFASHNEAQFLSRYGLADDVMKVYLLEKDKLKKQLAGIEGRVCLSFRCWTSSTSSRSYITLTAHYMDDQWNLIVKLLNFCHLEPSHDNFELSRKVIGYLQEWEIEKNIFSITMDNDPANDGNSQNLKDQLCSLDSLLRTFITSATAPSLEKHFKCCAHVLDLKLEESLKVVSDVLEKIRNSLKFVSVSNSRLKQFCQCVEEVGGGDGTDGLHLDVSGKWVSTYLMLKSAIKYRSAFEHMCLKDTTYNDCPSSEEWERGEKICEFLMVFYGLATITSQSTYPTSHTHFVHILGIEFSLKKMMLSEDDTIRDMASKMLNEFDNCLSEYSVILALVCVLNPRLKFKFLEYLYEKLGYDTETVKDKVSSARKAVYALFNEYADKSASTSSSLYVVNPFSSTSTQDWNLELSLKKYYEYLEIKRQEKYVDGVSQLDLYLEEIEGYYKNPLEYWKCKGHKYGILERMARDVFSIPIITVASESTFSPGSSILNNMDFIGESCNSAYSDGDHEPPNKKLKRFNVWNYFVKIEADGKEMCECKTCGKQFISGRTGISHLNQHITKCPLIMKSRIAKHFNLKKIDHRMVRDSVTQMTIKSCIPFQFVEWDEFRAFTKFASFNEARFLSRDAVVADVMKVYLLEKDKLKKQLAAVKGGVCLSFHCWTSSASSHGYITLTAHFMDDQWNLVVKLLSFCHFNPSHDSFELSRKVIDCLQEWGIERNVFSITMDNVSANDETSQNLKNQLCSLDSLLRTFITSATAPSLEKHFKCCARVLDLMVEESLKVVSGVLDKIRNSLKYVSVSNSRLKQFCQCVEEVDGSDSSDGLHVDVSGKWVSTYTMLKNAIKYRSAFEHMGLNDTTYSDCPSSEEWERGEKICAFLNDFFELTNIISESTHPTLHTYLDHILRIEFSLKKMMLNEDDKIRDMASKMSNEFDKYMSEYSMILAFGCVLDPRLKFESLKYLYEKLGHDTETVKDKVSNVRKTLYSLFNEYANKVASISIRLPVRDSRFTSRERKTDLLSEYREYVEKERLERYAGGVTQLDLYLKERDRGYYVNALQYWKDNEKEYYILARLARDVLSVPLIAVASESPFSPGNCILNKYRSCMFSENLQALVCSHNWLFGFSPIDQFGDEIEETRKIGKNLSKQVSKCHCVHENKTEDS*