Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625170 | XP_003604146.2 | 99.084 | 764 | 7 | 0 | 1 | 764 | 1 | 764 | 0.0 | 1553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625170 | sp|Q9LTB0|EX84B_ARATH | 75.395 | 760 | 177 | 6 | 5 | 763 | 1 | 751 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0529670 | Msa0625170 | 0.801410 | 9.123282e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625170 | MtrunA17_Chr4g0000541 | 99.084 | 764 | 7 | 0 | 1 | 764 | 1 | 764 | 0.0 | 1553 |
| Msa0625170 | MtrunA17_Chr6g0471001 | 57.143 | 742 | 293 | 11 | 24 | 752 | 31 | 760 | 0.0 | 823 |
| Msa0625170 | MtrunA17_Chr1g0210011 | 57.315 | 663 | 256 | 10 | 87 | 731 | 4 | 657 | 0.0 | 691 |
| Msa0625170 | MtrunA17_Chr4g0043561 | 35.159 | 694 | 428 | 10 | 49 | 730 | 28 | 711 | 2.70e-127 | 397 |
| Msa0625170 | MtrunA17_Chr1g0183451 | 25.830 | 693 | 471 | 16 | 49 | 730 | 61 | 721 | 4.80e-64 | 229 |
| Msa0625170 | MtrunA17_Chr1g0210001 | 59.701 | 67 | 26 | 1 | 21 | 86 | 24 | 90 | 5.18e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625170 | AT5G49830.1 | 75.395 | 760 | 177 | 6 | 5 | 763 | 1 | 751 | 0.0 | 1085 |
| Msa0625170 | AT5G49830.3 | 72.566 | 791 | 176 | 7 | 5 | 763 | 1 | 782 | 0.0 | 1071 |
| Msa0625170 | AT5G49830.2 | 76.257 | 716 | 162 | 5 | 49 | 763 | 105 | 813 | 0.0 | 1033 |
| Msa0625170 | AT1G10385.1 | 61.538 | 741 | 274 | 8 | 21 | 757 | 20 | 753 | 0.0 | 882 |
| Msa0625170 | AT1G10180.1 | 35.277 | 686 | 427 | 8 | 49 | 730 | 28 | 700 | 1.50e-126 | 396 |
Find 167 sgRNAs with CRISPR-Local
Find 652 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAAGCTTTGAGGATTC+TGG | 0.189121 | 4_3:+4163058 | Msa0625170:CDS |
| TCTACGGTTATCATTCTTAT+AGG | 0.192299 | 4_3:-4163206 | None:intergenic |
| AACAGAAGCATTTGCTCTTC+TGG | 0.230386 | 4_3:+4162066 | Msa0625170:CDS |
| TCTTCTTCCTCCATTGATTC+TGG | 0.235573 | 4_3:-4163040 | None:intergenic |
| TCTTATAGGGATCTTGGTTT+AGG | 0.237951 | 4_3:-4163192 | None:intergenic |
| AGTTGAGTTTCCTGATCTTT+TGG | 0.240158 | 4_3:+4161580 | Msa0625170:CDS |
| AAACATATCTGCTGCTATAT+TGG | 0.247414 | 4_3:-4164621 | None:intergenic |
| CTCTCCCCGTTTATTTCCTT+TGG | 0.259208 | 4_3:-4167445 | None:intergenic |
| TTTCAGAAGATCAGAGCTTT+TGG | 0.266073 | 4_3:+4164708 | Msa0625170:CDS |
| CTTATAGGGATCTTGGTTTA+GGG | 0.280687 | 4_3:-4163191 | None:intergenic |
| ATTGGACTGTACTAATTTAC+AGG | 0.283078 | 4_3:-4167555 | None:intergenic |
| CTCCTCCATTCCCGTTGTTC+AGG | 0.299705 | 4_3:-4163256 | None:intergenic |
| CTACGGTTATCATTCTTATA+GGG | 0.304822 | 4_3:-4163205 | None:intergenic |
| TGCCCATCGCTTCAATTTGA+TGG | 0.308622 | 4_3:+4162387 | Msa0625170:CDS |
| TCGCTTCAATTTGATGGTTC+AGG | 0.316321 | 4_3:+4162393 | Msa0625170:CDS |
| CTATGGCTGCTGCTGATGAT+TGG | 0.319105 | 4_3:+4162290 | Msa0625170:CDS |
| GCTAGCTAATGCCTCATTAC+TGG | 0.329413 | 4_3:+4163129 | Msa0625170:CDS |
| GAGGAAGGGCCAAGGCCTTT+AGG | 0.330967 | 4_3:+4164740 | Msa0625170:CDS |
| CCAATCTATCATGAAATTAC+TGG | 0.335302 | 4_3:+4167573 | Msa0625170:three_prime_UTR |
| TCATTAAACCATTCATCTTC+AGG | 0.346274 | 4_3:-4167385 | None:intergenic |
| GCGGCGAGTGTTAAAGAAAA+TGG | 0.352110 | 4_3:+4157417 | Msa0625170:CDS |
| TCTCCTTCGTGATCTTGTTA+TGG | 0.358650 | 4_3:+4157353 | Msa0625170:exon |
| GTTTAGGGAGGAGAGCTTCA+TGG | 0.358778 | 4_3:-4163176 | None:intergenic |
| TATCATTCTTATAGGGATCT+TGG | 0.372253 | 4_3:-4163198 | None:intergenic |
| AGCTGACATGTATATAAGTA+TGG | 0.372642 | 4_3:+4163375 | Msa0625170:CDS |
| TAGCTAGCAGTGCAATCTGC+TGG | 0.380139 | 4_3:-4163114 | None:intergenic |
| AATTGCAAAACATACCTATA+CGG | 0.393334 | 4_3:-4167234 | None:intergenic |
| GAATTGTGAATGAAATTATC+AGG | 0.397966 | 4_3:+4167175 | Msa0625170:CDS |
| CCAGTAATTTCATGATAGAT+TGG | 0.398861 | 4_3:-4167573 | None:intergenic |
| CGGCCGTCAAACACCTCATA+TGG | 0.413368 | 4_3:+4161914 | Msa0625170:CDS |
| TACTGCAGCTCTAGCACAAC+TGG | 0.415141 | 4_3:+4161946 | Msa0625170:CDS |
| TATGGCTGCTGCTGATGATT+GGG | 0.419906 | 4_3:+4162291 | Msa0625170:CDS |
| AGGTTGCTTGAGTGGATAGT+AGG | 0.422298 | 4_3:-4161433 | None:intergenic |
| ATGTTAATTAACGCAATAAT+CGG | 0.422821 | 4_3:-4167596 | None:intergenic |
| CCAAGGCCTTTAGGTCCTCT+TGG | 0.424024 | 4_3:+4164749 | Msa0625170:CDS |
| GGAAAACCAAAGGAAATAAA+CGG | 0.424170 | 4_3:+4167439 | Msa0625170:CDS |
| AGTTCAGATCCACGGGTAGA+AGG | 0.425091 | 4_3:-4161785 | None:intergenic |
| AATCTGCTGGGCTTCAGTTT+CGG | 0.426706 | 4_3:-4163101 | None:intergenic |
| TGAAAGCTCACCTTCTAAAT+CGG | 0.432039 | 4_3:-4161399 | None:intergenic |
| GAAAACCAAAGGAAATAAAC+GGG | 0.435327 | 4_3:+4167440 | Msa0625170:CDS |
| GCTTATACAGGACTTCTTTG+AGG | 0.435586 | 4_3:+4162919 | Msa0625170:intron |
| AGCAACCTTGATACATGGTT+TGG | 0.436211 | 4_3:+4161448 | Msa0625170:CDS |
| CATATCCTCCTAATGCTAAT+CGG | 0.438507 | 4_3:+4162320 | Msa0625170:CDS |
| GCCTTTCTGTGGTTCTTCTA+CGG | 0.438652 | 4_3:-4163222 | None:intergenic |
| CATTTGCTCTTCTGGTGAAA+AGG | 0.441118 | 4_3:+4162074 | Msa0625170:CDS |
| AAATCGTCATCCTGAACAAC+GGG | 0.443953 | 4_3:+4163246 | Msa0625170:CDS |
| AAGGAGATATCCGATTTAGA+AGG | 0.455997 | 4_3:+4161389 | Msa0625170:CDS |
| AGGTCCTCTTGGTCTACAAC+AGG | 0.457183 | 4_3:+4164760 | Msa0625170:CDS |
| TGAAATATGTCAAGATGCTA+TGG | 0.457337 | 4_3:+4167405 | Msa0625170:CDS |
| GACTCGTGGGTTCAGTTGAC+AGG | 0.457851 | 4_3:+4163281 | Msa0625170:CDS |
| CACCTCTTCTCTCAATGATA+AGG | 0.462515 | 4_3:+4157509 | Msa0625170:CDS |
| ACAAGCTGCAAGTGACTCAT+TGG | 0.462838 | 4_3:+4161985 | Msa0625170:CDS |
| AAAAGCACTACCAGAATCAA+TGG | 0.468783 | 4_3:+4163030 | Msa0625170:CDS |
| CCAAGAGGACCTAAAGGCCT+TGG | 0.469828 | 4_3:-4164749 | None:intergenic |
| CCGGCCTGCCGATTAGCATT+AGG | 0.475118 | 4_3:-4162328 | None:intergenic |
| ATAGCAGCAGATATGTTTGT+AGG | 0.476239 | 4_3:+4164626 | Msa0625170:CDS |
| CAACAGGGATGGATCCGTAT+AGG | 0.477278 | 4_3:+4167220 | Msa0625170:CDS |
| AAATATCAGACCTGGACAAA+TGG | 0.478669 | 4_3:+4161555 | Msa0625170:CDS |
| GATGCTATGGAAAGATTAAG+TGG | 0.486477 | 4_3:+4167418 | Msa0625170:CDS |
| AGCTAGCAGTGCAATCTGCT+GGG | 0.487168 | 4_3:-4163113 | None:intergenic |
| GCTTTGGCCGCTCTTGATGA+AGG | 0.487852 | 4_3:+4161635 | Msa0625170:CDS |
| CAAACGCAAGCCAAATTTGA+CGG | 0.488013 | 4_3:-4167734 | None:intergenic |
| CCTCCATATGAGGTGTTTGA+CGG | 0.488508 | 4_3:-4161917 | None:intergenic |
| TTGATACATGGTTTGGCCGA+TGG | 0.489371 | 4_3:+4161455 | Msa0625170:CDS |
| ACCTCTGCTTAGTATGCAGT+TGG | 0.491714 | 4_3:+4162949 | Msa0625170:CDS |
| AGCAGATATGTTTGTAGGGA+GGG | 0.495602 | 4_3:+4164631 | Msa0625170:CDS |
| ACAAGAGAGTACTGCTGCTA+TGG | 0.495618 | 4_3:+4162273 | Msa0625170:CDS |
| TTCTAAATCGGATATCTCCT+TGG | 0.496112 | 4_3:-4161387 | None:intergenic |
| TGCAGAGACAGAAGTAAAGA+TGG | 0.497612 | 4_3:-4161701 | None:intergenic |
| AAGAGAACATCCAAAAGATC+AGG | 0.497714 | 4_3:-4161590 | None:intergenic |
| TTGGCTTCATCAGCAGCTGC+AGG | 0.498943 | 4_3:+4162103 | Msa0625170:CDS |
| GGAGGAAGAAGAAAGCTTTG+AGG | 0.502847 | 4_3:+4163051 | Msa0625170:CDS |
| AAGGCGAGTAGAAGAAGCTT+TGG | 0.503692 | 4_3:+4161619 | Msa0625170:CDS |
| TCCTCCTAATGCTAATCGGC+AGG | 0.505739 | 4_3:+4162324 | Msa0625170:CDS |
| AGTATATGCTCCTCCATATG+AGG | 0.506025 | 4_3:-4161927 | None:intergenic |
| TGGATGTTCTCTTGGCTGAA+AGG | 0.507358 | 4_3:+4161600 | Msa0625170:CDS |
| TTCTTCTGAACTTGTGATGT+GGG | 0.508485 | 4_3:+4162033 | Msa0625170:CDS |
| GCAGTTGGGAGGACAAGCTC+TGG | 0.512635 | 4_3:+4162964 | Msa0625170:CDS |
| ATTATTGCGTTAATTAACAT+TGG | 0.513415 | 4_3:+4167599 | Msa0625170:three_prime_UTR |
| TTTCATAAAACTGAACAGAA+TGG | 0.516066 | 4_3:+4164598 | Msa0625170:CDS |
| GACACTTCTGCGCATCTCCT+CGG | 0.517265 | 4_3:-4159243 | None:intergenic |
| GTCATCCTGAACAACGGGAA+TGG | 0.517673 | 4_3:+4163251 | Msa0625170:CDS |
| GAAATGCGGATGAAGTTGAA+TGG | 0.522687 | 4_3:+4163401 | Msa0625170:CDS |
| ATTCTTCTGAACTTGTGATG+TGG | 0.523832 | 4_3:+4162032 | Msa0625170:CDS |
| CGATGATGAAGTCATCTTCA+CGG | 0.524587 | 4_3:+4157382 | Msa0625170:CDS |
| GAACCATCAAATTGAAGCGA+TGG | 0.527818 | 4_3:-4162390 | None:intergenic |
| AAACGCAAGCCAAATTTGAC+GGG | 0.528414 | 4_3:-4167733 | None:intergenic |
| GAGTGTGTTCAAATAGCATT+GGG | 0.528713 | 4_3:+4162145 | Msa0625170:CDS |
| TTGAAATGCTGTTGTACTAC+CGG | 0.528793 | 4_3:-4162347 | None:intergenic |
| TCTGGTGAAAAGGCATGCAT+TGG | 0.529675 | 4_3:+4162084 | Msa0625170:CDS |
| ATGTATCAAGGTTGCTTGAG+TGG | 0.531435 | 4_3:-4161441 | None:intergenic |
| CTAACTATGCAGCCTTCATA+CGG | 0.533378 | 4_3:+4159270 | Msa0625170:CDS |
| TGACAAATACCGACCGTTGG+AGG | 0.534564 | 4_3:-4167139 | None:intergenic |
| AACACAAACTAACCGTATGA+AGG | 0.541012 | 4_3:-4159282 | None:intergenic |
| CAGGACTTCTTTGAGGATGT+AGG | 0.541656 | 4_3:+4162926 | Msa0625170:intron |
| TAGCAGCAGATATGTTTGTA+GGG | 0.544112 | 4_3:+4164627 | Msa0625170:CDS |
| ATCGGCCAAACCATGTATCA+AGG | 0.549441 | 4_3:-4161453 | None:intergenic |
| AATGGAGTTAAGCTTGAAGA+AGG | 0.551779 | 4_3:+4157435 | Msa0625170:CDS |
| AGTATAACATGCAAAGTCTC+CGG | 0.553019 | 4_3:+4161894 | Msa0625170:CDS |
| CTTATCATTGAGAGAAGAGG+TGG | 0.553048 | 4_3:-4157508 | None:intergenic |
| ACTCAAGCAACCTTGATACA+TGG | 0.553619 | 4_3:+4161443 | Msa0625170:CDS |
| TAAATGTCATAGAACTTCCA+AGG | 0.554039 | 4_3:+4161370 | Msa0625170:intron |
| AGTGGATAGTAGGTTTCTGA+TGG | 0.555242 | 4_3:-4161423 | None:intergenic |
| TTGGACTGTACTAATTTACA+GGG | 0.560286 | 4_3:-4167554 | None:intergenic |
| GACATGTATATAAGTATGGA+AGG | 0.560326 | 4_3:+4163379 | Msa0625170:CDS |
| ATCTTCACGGTCAAGAGCTA+CGG | 0.560822 | 4_3:+4157395 | Msa0625170:CDS |
| TGGAAACAAAATTGTACGAA+TGG | 0.565828 | 4_3:+4163078 | Msa0625170:CDS |
| CATATGAGGTGTTTGACGGC+CGG | 0.569334 | 4_3:-4161913 | None:intergenic |
| AACCATCAAATTGAAGCGAT+GGG | 0.570523 | 4_3:-4162389 | None:intergenic |
| GGAGTGTGTTCAAATAGCAT+TGG | 0.572465 | 4_3:+4162144 | Msa0625170:CDS |
| TGCACGAAGTTCAGATCCAC+GGG | 0.573946 | 4_3:-4161792 | None:intergenic |
| ATGATATTGAGGAAGGGCCA+AGG | 0.574464 | 4_3:+4164732 | Msa0625170:CDS |
| AAATGAAAGGGGTGCCAAGG+GGG | 0.575281 | 4_3:-4167653 | None:intergenic |
| TTATCGATATCCGATTCTGA+TGG | 0.583099 | 4_3:+4161494 | Msa0625170:CDS |
| TGTAGACCAAGAGGACCTAA+AGG | 0.584749 | 4_3:-4164755 | None:intergenic |
| GAGAGCTTCATGGCTGCGCG+TGG | 0.585405 | 4_3:-4163166 | None:intergenic |
| TCTAATGCTTGTTCAACACT+AGG | 0.587244 | 4_3:-4162232 | None:intergenic |
| AATGAAAGGGGTGCCAAGGG+GGG | 0.587448 | 4_3:-4167652 | None:intergenic |
| ACAAGTTCAGAAGAATATGC+TGG | 0.588485 | 4_3:-4162025 | None:intergenic |
| TTGGGAGGACAAGCTCTGGA+AGG | 0.588760 | 4_3:+4162968 | Msa0625170:CDS |
| CCTCTGCTTAGTATGCAGTT+GGG | 0.589651 | 4_3:+4162950 | Msa0625170:CDS |
| GTGCAGAGACAGATGCAGTA+GGG | 0.590473 | 4_3:-4167480 | None:intergenic |
| GCTTGTCAGCCTTCTACCCG+TGG | 0.590728 | 4_3:+4161776 | Msa0625170:CDS |
| ATAGGGATCTTGGTTTAGGG+AGG | 0.592147 | 4_3:-4163188 | None:intergenic |
| TGTGAATGAAATTATCAGGA+AGG | 0.593693 | 4_3:+4167179 | Msa0625170:CDS |
| TCAAATCTATCAGACTTGAA+AGG | 0.596208 | 4_3:-4157465 | None:intergenic |
| AAGATTAAGTGGAAAACCAA+AGG | 0.598349 | 4_3:+4167429 | Msa0625170:CDS |
| TTTGGGATGATATTGAGGAA+GGG | 0.600436 | 4_3:+4164726 | Msa0625170:CDS |
| TGGGAGGACAAGCTCTGGAA+GGG | 0.602271 | 4_3:+4162969 | Msa0625170:CDS |
| CCTTGACAAATACCGACCGT+TGG | 0.602728 | 4_3:-4167142 | None:intergenic |
| ACCGTAGAAGAACCACAGAA+AGG | 0.603747 | 4_3:+4163221 | Msa0625170:CDS |
| TGTGCAGAGACAGATGCAGT+AGG | 0.604544 | 4_3:-4167481 | None:intergenic |
| CCTAATGCTAATCGGCAGGC+CGG | 0.605176 | 4_3:+4162328 | Msa0625170:CDS |
| ATCCTGAACAACGGGAATGG+AGG | 0.608982 | 4_3:+4163254 | Msa0625170:CDS |
| TATAAGTATGGAAGGAAATG+CGG | 0.609812 | 4_3:+4163387 | Msa0625170:CDS |
| ATGCACGAAGTTCAGATCCA+CGG | 0.609989 | 4_3:-4161793 | None:intergenic |
| GTGATCTGCCTGAAGATGAA+TGG | 0.612166 | 4_3:+4167377 | Msa0625170:intron |
| AAATCAGGCTCAAAGCATGT+TGG | 0.615504 | 4_3:-4163324 | None:intergenic |
| AACCTTATCATTGAGAGAAG+AGG | 0.615582 | 4_3:-4157511 | None:intergenic |
| GGAATGGAGGAGACGACTCG+TGG | 0.616377 | 4_3:+4163267 | Msa0625170:CDS |
| TAGTTCATCAGCCAGTAATG+AGG | 0.617154 | 4_3:-4163140 | None:intergenic |
| GCTTCATCAGCAGCTGCAGG+AGG | 0.617864 | 4_3:+4162106 | Msa0625170:CDS |
| GCAGAGACAGAAGTAAAGAT+GGG | 0.618767 | 4_3:-4161700 | None:intergenic |
| CAGCAGATATGTTTGTAGGG+AGG | 0.620591 | 4_3:+4164630 | Msa0625170:CDS |
| ACTCAACTAACCATTTGTCC+AGG | 0.622338 | 4_3:-4161565 | None:intergenic |
| TGCTCATTATTAGAAGCTCG+TGG | 0.624438 | 4_3:+4162172 | Msa0625170:CDS |
| TGAATCGATGTGAACTCCAT+CGG | 0.624805 | 4_3:-4161471 | None:intergenic |
| CTTGAAAAGAGCTTCTGCCG+AGG | 0.627062 | 4_3:+4159226 | Msa0625170:CDS |
| CCAACGGTCGGTATTTGTCA+AGG | 0.628869 | 4_3:+4167142 | Msa0625170:CDS |
| GCCTGCCGATTAGCATTAGG+AGG | 0.633405 | 4_3:-4162325 | None:intergenic |
| CCTTCGTGATCTTGTTATGG+CGG | 0.635548 | 4_3:+4157356 | Msa0625170:exon |
| ACATAAAGAAATATCAGACC+TGG | 0.635904 | 4_3:+4161547 | Msa0625170:CDS |
| AGTAGCAAGCTGTGAGCATG+CGG | 0.636005 | 4_3:-4161848 | None:intergenic |
| AAAATGAAAGGGGTGCCAAG+GGG | 0.646480 | 4_3:-4167654 | None:intergenic |
| CCGTCAAACACCTCATATGG+AGG | 0.647577 | 4_3:+4161917 | Msa0625170:CDS |
| CCCAACTGCATACTAAGCAG+AGG | 0.650328 | 4_3:-4162950 | None:intergenic |
| AAAATCGTCATCCTGAACAA+CGG | 0.651815 | 4_3:+4163245 | Msa0625170:CDS |
| AGGAGGTTTAAGAGCTGCTG+CGG | 0.658917 | 4_3:+4162123 | Msa0625170:CDS |
| CATACCTGTTGTAGACCAAG+AGG | 0.660216 | 4_3:-4164764 | None:intergenic |
| GAATGGAGGAGACGACTCGT+GGG | 0.664709 | 4_3:+4163268 | Msa0625170:CDS |
| ACGTTCTCCTTCATCAAGAG+CGG | 0.665530 | 4_3:-4161642 | None:intergenic |
| TTCACGGTCAAGAGCTACGG+CGG | 0.666183 | 4_3:+4157398 | Msa0625170:CDS |
| AGCACTACCAGAATCAATGG+AGG | 0.687736 | 4_3:+4163033 | Msa0625170:CDS |
| CTGCTTAGTATGCAGTTGGG+AGG | 0.693555 | 4_3:+4162953 | Msa0625170:CDS |
| CCGCCATAACAAGATCACGA+AGG | 0.749122 | 4_3:-4157356 | None:intergenic |
| AAAACCAAAGGAAATAAACG+GGG | 0.769107 | 4_3:+4167441 | Msa0625170:CDS |
| AGAATTCTATTACCGAACGT+AGG | 0.770772 | 4_3:+4161723 | Msa0625170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATTT+AGG | + | chr4_3:4157760-4157779 | Msa0625170:intron | 0.0% |
| !! | TATATATATATATATATATT+AGG | - | chr4_3:4157759-4157778 | None:intergenic | 0.0% |
| !!! | TTAATATAAATAATTTTAAA+TGG | - | chr4_3:4165450-4165469 | None:intergenic | 0.0% |
| !! | TTATTTATATTAATTAAATT+TGG | + | chr4_3:4165457-4165476 | Msa0625170:intron | 0.0% |
| !! | TATTTATATTAATTAAATTT+GGG | + | chr4_3:4165458-4165477 | Msa0625170:intron | 0.0% |
| !!! | TATTTTTCTCAAATTATTAT+CGG | + | chr4_3:4158420-4158439 | Msa0625170:intron | 10.0% |
| !!! | AATTCATTTTATTAAATTAG+GGG | - | chr4_3:4159630-4159649 | None:intergenic | 10.0% |
| !!! | CAATTCATTTTATTAAATTA+GGG | - | chr4_3:4159631-4159650 | None:intergenic | 10.0% |
| !!! | TCAATTCATTTTATTAAATT+AGG | - | chr4_3:4159632-4159651 | None:intergenic | 10.0% |
| !!! | AAAAAAAATCATTTTTGAAA+TGG | - | chr4_3:4159998-4160017 | None:intergenic | 10.0% |
| !! | TTAAGCTAAATAAATTAAAA+TGG | - | chr4_3:4161309-4161328 | None:intergenic | 10.0% |
| !! | GAAAAAAAAAAAAAAAAAAC+AGG | - | chr4_3:4162688-4162707 | None:intergenic | 10.0% |
| !! | TTCAAAAAAAAAAAAAAGAA+AGG | - | chr4_3:4165607-4165626 | None:intergenic | 10.0% |
| !! | AACGTTAAAAAAAAATTATA+TGG | - | chr4_3:4167079-4167098 | None:intergenic | 10.0% |
| !! | TATATATATAATTAAGCTTC+TGG | - | chr4_3:4157717-4157736 | None:intergenic | 15.0% |
| !! | TTTATAAGTTCAAAAAACTT+AGG | + | chr4_3:4158163-4158182 | Msa0625170:intron | 15.0% |
| !! | TCTTATTCATATATTATCAT+CGG | - | chr4_3:4159527-4159546 | None:intergenic | 15.0% |
| !! | TGTATGCTATATTATTTATA+GGG | - | chr4_3:4159566-4159585 | None:intergenic | 15.0% |
| !! | ATGTATGCTATATTATTTAT+AGG | - | chr4_3:4159567-4159586 | None:intergenic | 15.0% |
| !!! | GATATTTTAAAACATATACT+AGG | + | chr4_3:4159762-4159781 | Msa0625170:intron | 15.0% |
| !!! | TTTTGTTAATATATCTATCT+AGG | - | chr4_3:4159825-4159844 | None:intergenic | 15.0% |
| !! | TTAAATTGTAAGCAATTTAA+TGG | - | chr4_3:4160108-4160127 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAAGGAAATAT+TGG | - | chr4_3:4160446-4160465 | None:intergenic | 15.0% |
| !!! | TTTTGAAAATTTTCAGAATT+CGG | + | chr4_3:4160454-4160473 | Msa0625170:intron | 15.0% |
| !!! | TGTTGATTTTTAAAAATTAC+AGG | + | chr4_3:4163711-4163730 | Msa0625170:intron | 15.0% |
| !!! | TTTTTAAAAATTACAGGATT+AGG | + | chr4_3:4163717-4163736 | Msa0625170:intron | 15.0% |
| !! | TCTACAATTAGAAATATATA+TGG | - | chr4_3:4163764-4163783 | None:intergenic | 15.0% |
| !! | ATATAATAAACCACAAAAAT+TGG | - | chr4_3:4163872-4163891 | None:intergenic | 15.0% |
| !! | TAAGTTATTAAGATATTCAA+AGG | - | chr4_3:4164429-4164448 | None:intergenic | 15.0% |
| !! | TTGAATATCTTAATAACTTA+TGG | + | chr4_3:4164429-4164448 | Msa0625170:intron | 15.0% |
| !!! | CAAATTGGATAATTTTATTT+GGG | + | chr4_3:4164885-4164904 | Msa0625170:intron | 15.0% |
| !! | TTATTAACATTAGCTATAAT+GGG | + | chr4_3:4165337-4165356 | Msa0625170:intron | 15.0% |
| !! | AATTATGAAGTAAGTAATCA+TGG | - | chr4_3:4157621-4157640 | None:intergenic | 20.0% |
| !! | TATATATATTTAGGTCTGTT+TGG | + | chr4_3:4157769-4157788 | Msa0625170:intron | 20.0% |
| !! | GAGAAAAATAACATAATTGA+AGG | - | chr4_3:4158410-4158429 | None:intergenic | 20.0% |
| !!! | CTTTACTAGTTTATAGTTTA+AGG | - | chr4_3:4159331-4159350 | None:intergenic | 20.0% |
| !! | ATACAATAATTTAACACAGA+TGG | + | chr4_3:4159657-4159676 | Msa0625170:intron | 20.0% |
| !! | TACAATAATTTAACACAGAT+GGG | + | chr4_3:4159658-4159677 | Msa0625170:intron | 20.0% |
| !! | CAAAAAATACTTGTATCATA+AGG | + | chr4_3:4159944-4159963 | Msa0625170:intron | 20.0% |
| !!! | GAATTCTGAAAATTTTCAAA+AGG | - | chr4_3:4160455-4160474 | None:intergenic | 20.0% |
| !! | TATTTATTTGATGAAACATG+AGG | - | chr4_3:4161061-4161080 | None:intergenic | 20.0% |
| !! | AAGGATAAATAAAAAGAACA+AGG | - | chr4_3:4161220-4161239 | None:intergenic | 20.0% |
| !!! | AGGTAACTGTTTTTTTTTAA+TGG | - | chr4_3:4162546-4162565 | None:intergenic | 20.0% |
| !! | GACAAAATAAAAAGATGAAA+AGG | - | chr4_3:4162710-4162729 | None:intergenic | 20.0% |
| !!! | ATTTTCAATTTACTTTAAGC+TGG | + | chr4_3:4162885-4162904 | Msa0625170:intron | 20.0% |
| !!! | TAATTTTTTGGATGTGAAAT+TGG | + | chr4_3:4163813-4163832 | Msa0625170:intron | 20.0% |
| !! | CAAAAGAAATATTACTCATT+GGG | + | chr4_3:4164045-4164064 | Msa0625170:intron | 20.0% |
| !! | TAAAACATAGTTAGCATTTA+TGG | - | chr4_3:4164372-4164391 | None:intergenic | 20.0% |
| !!! | AAACAATTTTCAGTTAGTTT+TGG | + | chr4_3:4164813-4164832 | Msa0625170:intron | 20.0% |
| !!! | ATTATCCAATTTGCTTATAA+AGG | - | chr4_3:4164878-4164897 | None:intergenic | 20.0% |
| !!! | GCAAATTGGATAATTTTATT+TGG | + | chr4_3:4164884-4164903 | Msa0625170:intron | 20.0% |
| !! | AAGAACTCAAGTTTATTATT+GGG | - | chr4_3:4165139-4165158 | None:intergenic | 20.0% |
| !! | ATTAAAACATGTAATTGAAG+AGG | - | chr4_3:4165266-4165285 | None:intergenic | 20.0% |
| !!! | CAATTACATGTTTTAATCAA+AGG | + | chr4_3:4165269-4165288 | Msa0625170:intron | 20.0% |
| !! | AGTATCAATTTAAGAAATCA+AGG | - | chr4_3:4165307-4165326 | None:intergenic | 20.0% |
| !! | CTTATTAACATTAGCTATAA+TGG | + | chr4_3:4165336-4165355 | Msa0625170:intron | 20.0% |
| !!! | AATTTGTTTTGCAAATTTTC+TGG | - | chr4_3:4166055-4166074 | None:intergenic | 20.0% |
| !!! | CATAAAATATATTTGTTGTG+TGG | + | chr4_3:4166434-4166453 | Msa0625170:intron | 20.0% |
| !!! | AAACAATATTTTCTTTGAAC+CGG | + | chr4_3:4166464-4166483 | Msa0625170:intron | 20.0% |
| !!! | ACAAATTTTCTTATAAGTTG+TGG | - | chr4_3:4166810-4166829 | None:intergenic | 20.0% |
| !!! | ACAAATTTTCTTATAAGTTG+TGG | - | chr4_3:4166810-4166829 | None:intergenic | 20.0% |
| !! | ATGTTAATTAACGCAATAAT+CGG | - | chr4_3:4167599-4167618 | None:intergenic | 20.0% |
| !! | ATTATTGCGTTAATTAACAT+TGG | + | chr4_3:4167599-4167618 | Msa0625170:three_prime_UTR | 20.0% |
| !! | AATAAAGACAAAAATGAAAG+GGG | - | chr4_3:4167667-4167686 | None:intergenic | 20.0% |
| !! | GAATAAAGACAAAAATGAAA+GGG | - | chr4_3:4167668-4167687 | None:intergenic | 20.0% |
| !! | TGAATAAAGACAAAAATGAA+AGG | - | chr4_3:4167669-4167688 | None:intergenic | 20.0% |
| ! | AAAATTGAAAACCTGATGAA+TGG | - | chr4_3:4157582-4157601 | None:intergenic | 25.0% |
| ! | TTATGTAGTTGATTAATCGA+AGG | + | chr4_3:4157653-4157672 | Msa0625170:intron | 25.0% |
| ! | CGTTTAATATGCTTATGTAT+AGG | + | chr4_3:4157827-4157846 | Msa0625170:intron | 25.0% |
| !!! | GTTGTTTTCATAAGCTATTT+TGG | + | chr4_3:4157911-4157930 | Msa0625170:intron | 25.0% |
| !!! | ATTCTCAGCTTATTTTGATA+AGG | - | chr4_3:4157940-4157959 | None:intergenic | 25.0% |
| ! | TATCAAAATAAGCTGAGAAT+AGG | + | chr4_3:4157940-4157959 | Msa0625170:intron | 25.0% |
| ! | TAAGTTCAAAAAACTTAGGT+TGG | + | chr4_3:4158167-4158186 | Msa0625170:intron | 25.0% |
| !! | ATACCAACATTTTCTATCAA+AGG | + | chr4_3:4158322-4158341 | Msa0625170:intron | 25.0% |
| ! | CTCTTAAATTCTTCACTTAT+TGG | - | chr4_3:4158542-4158561 | None:intergenic | 25.0% |
| ! | GCATCACAATTGATATATAA+AGG | - | chr4_3:4158625-4158644 | None:intergenic | 25.0% |
| !!! | TCATGCATAGTTTTAAATTC+CGG | - | chr4_3:4158702-4158721 | None:intergenic | 25.0% |
| ! | AAAATTGTGACTAAAAGGAA+TGG | - | chr4_3:4159011-4159030 | None:intergenic | 25.0% |
| ! | GAAACAAAATTGTGACTAAA+AGG | - | chr4_3:4159016-4159035 | None:intergenic | 25.0% |
| ! | TAATGGTAAAACCTATTTGT+TGG | + | chr4_3:4159056-4159075 | Msa0625170:intron | 25.0% |
| ! | AATGGTAAAACCTATTTGTT+GGG | + | chr4_3:4159057-4159076 | Msa0625170:intron | 25.0% |
| ! | CTATAAACTAGTAAAGAAAG+TGG | + | chr4_3:4159335-4159354 | Msa0625170:intron | 25.0% |
| ! | ATACTTGTATCATAAGGAAA+AGG | + | chr4_3:4159950-4159969 | Msa0625170:intron | 25.0% |
| ! | ACATTTGTAAAAAGTTCACA+AGG | - | chr4_3:4160022-4160041 | None:intergenic | 25.0% |
| ! | AATTGTAAGCAATTTAATGG+AGG | - | chr4_3:4160105-4160124 | None:intergenic | 25.0% |
| ! | TCCATCTATAAATCATCAAT+AGG | + | chr4_3:4160189-4160208 | Msa0625170:intron | 25.0% |
| !! | CAAAAATCAAAGCAAGTTTT+TGG | + | chr4_3:4160377-4160396 | Msa0625170:intron | 25.0% |
| ! | TCTGCATTTAAATTTCTGTA+TGG | + | chr4_3:4160775-4160794 | Msa0625170:intron | 25.0% |
| ! | AAATTTCTGTATGGTAGATT+TGG | + | chr4_3:4160784-4160803 | Msa0625170:intron | 25.0% |
| !!! | TCTTTGCTTAAGTATTTTGA+GGG | + | chr4_3:4160928-4160947 | Msa0625170:intron | 25.0% |
| ! | GATGCTTCATAAATTCTAAA+AGG | + | chr4_3:4161015-4161034 | Msa0625170:intron | 25.0% |
| ! | ATCAGTATATGATTTGACAA+AGG | + | chr4_3:4161085-4161104 | Msa0625170:intron | 25.0% |
| ! | TCAGTATATGATTTGACAAA+GGG | + | chr4_3:4161086-4161105 | Msa0625170:intron | 25.0% |
| !! | CTAAAAAGTTTCAAAAGTAC+AGG | - | chr4_3:4162211-4162230 | None:intergenic | 25.0% |
| ! | TTATGACATAGAATGATGTT+TGG | + | chr4_3:4162446-4162465 | Msa0625170:intron | 25.0% |
| ! | TATGACATAGAATGATGTTT+GGG | + | chr4_3:4162447-4162466 | Msa0625170:intron | 25.0% |
| ! | AAAATTCACATTGCAAATCA+AGG | - | chr4_3:4162566-4162585 | None:intergenic | 25.0% |
| !!! | CAGCTGCATTATTTTAATAT+TGG | + | chr4_3:4162807-4162826 | Msa0625170:intron | 25.0% |
| ! | AAAAACCACAAACTACATAA+GGG | - | chr4_3:4162864-4162883 | None:intergenic | 25.0% |
| ! | AAAAAACCACAAACTACATA+AGG | - | chr4_3:4162865-4162884 | None:intergenic | 25.0% |
| !!! | GATGTTTTTTATGCTTATAC+AGG | + | chr4_3:4162907-4162926 | Msa0625170:intron | 25.0% |
| ! | TATACCTGAAAAATCAAAGA+CGG | - | chr4_3:4163430-4163449 | None:intergenic | 25.0% |
| !!! | CTTTGATTTTTCAGGTATAA+TGG | + | chr4_3:4163431-4163450 | Msa0625170:intron | 25.0% |
| !! | AAGTGTTAAATTTAAAACCC+AGG | - | chr4_3:4163459-4163478 | None:intergenic | 25.0% |
| !! | AAATCTTCAAAACTGATTCA+TGG | - | chr4_3:4163482-4163501 | None:intergenic | 25.0% |
| !! | TATTTCTTTTGGTAGATGAA+TGG | - | chr4_3:4164036-4164055 | None:intergenic | 25.0% |
| !! | CCAATGAGTAATATTTCTTT+TGG | - | chr4_3:4164047-4164066 | None:intergenic | 25.0% |
| ! | CCAAAAGAAATATTACTCAT+TGG | + | chr4_3:4164044-4164063 | Msa0625170:intron | 25.0% |
| ! | CAATTTATTATTTCCTTCTG+TGG | - | chr4_3:4164090-4164109 | None:intergenic | 25.0% |
| !! | TTAAACTCTGCATTTTATCA+AGG | - | chr4_3:4164240-4164259 | None:intergenic | 25.0% |
| !!! | ACAACTTTTTTACATCTTAG+TGG | + | chr4_3:4164291-4164310 | Msa0625170:intron | 25.0% |
| !!! | CAACTTTTTTACATCTTAGT+GGG | + | chr4_3:4164292-4164311 | Msa0625170:intron | 25.0% |
| ! | TAATAACTTATGGAACATGT+TGG | + | chr4_3:4164439-4164458 | Msa0625170:intron | 25.0% |
| ! | TTTCATAAAACTGAACAGAA+TGG | + | chr4_3:4164598-4164617 | Msa0625170:CDS | 25.0% |
| !!! | TTACAGAAACTGTTATTTTG+TGG | + | chr4_3:4164684-4164703 | Msa0625170:CDS | 25.0% |
| ! | ATGCAATTGAAATTTGATCA+TGG | + | chr4_3:4164784-4164803 | Msa0625170:intron | 25.0% |
| ! | TGATTCCTTTATAAGCAAAT+TGG | + | chr4_3:4164870-4164889 | Msa0625170:intron | 25.0% |
| ! | TATTATTCTGTTTAAACCAC+TGG | - | chr4_3:4164981-4165000 | None:intergenic | 25.0% |
| ! | TATTTACATGCCTTAAACTT+TGG | - | chr4_3:4165083-4165102 | None:intergenic | 25.0% |
| ! | CAAGAACTCAAGTTTATTAT+TGG | - | chr4_3:4165140-4165159 | None:intergenic | 25.0% |
| ! | TCAATTTAAGAAATCAAGGA+TGG | - | chr4_3:4165303-4165322 | None:intergenic | 25.0% |
| ! | AAAATTGAGGACCATATTAA+AGG | - | chr4_3:4166527-4166546 | None:intergenic | 25.0% |
| !! | AATATGGTCCTCAATTTTAA+AGG | + | chr4_3:4165488-4165507 | Msa0625170:intron | 25.0% |
| ! | CTATTATCGGTAATTTAAAG+AGG | - | chr4_3:4165526-4165545 | None:intergenic | 25.0% |
| ! | TTTAAATTACCGATAATAGC+CGG | + | chr4_3:4165527-4165546 | Msa0625170:intron | 25.0% |
| ! | AATTCCACAAACCAAAAAAA+AGG | - | chr4_3:4165559-4165578 | None:intergenic | 25.0% |
| !! | TTAATCTATTTTGTTGAGGA+TGG | - | chr4_3:4165656-4165675 | None:intergenic | 25.0% |
| !! | CAGATTAATCTATTTTGTTG+AGG | - | chr4_3:4165660-4165679 | None:intergenic | 25.0% |
| ! | CTCAACAAAATAGATTAATC+TGG | + | chr4_3:4165658-4165677 | Msa0625170:intron | 25.0% |
| ! | TTAAGATGAAAACAATAGCT+TGG | - | chr4_3:4165774-4165793 | None:intergenic | 25.0% |
| !! | AATTGTTGTTGTGAAAAGAA+AGG | - | chr4_3:4165852-4165871 | None:intergenic | 25.0% |
| !! | TTCTTGTTTCATTTACTTAG+AGG | - | chr4_3:4165934-4165953 | None:intergenic | 25.0% |
| !! | TTATGATTTGTGTTTGTCAA+TGG | - | chr4_3:4166026-4166045 | None:intergenic | 25.0% |
| !!! | AAACCATTAAGTTTTGGATT+CGG | - | chr4_3:4166267-4166286 | None:intergenic | 25.0% |
| !! | AATATGGTCCTCAATTTTAA+GGG | - | chr4_3:4165488-4165507 | None:intergenic | 25.0% |
| !! | TAATATGGTCCTCAATTTTA+AGG | - | chr4_3:4165487-4165506 | None:intergenic | 25.0% |
| ! | TAAAATTGAGGACCATATTA+AGG | + | chr4_3:4166526-4166545 | Msa0625170:intron | 25.0% |
| ! | AAAATTGAGGACCATATTAA+GGG | + | chr4_3:4166527-4166546 | Msa0625170:intron | 25.0% |
| !! | AATACTAACCTTTTAGATTC+TGG | + | chr4_3:4166702-4166721 | Msa0625170:intron | 25.0% |
| !!! | TTCTTTAGAATTTACTGATG+CGG | + | chr4_3:4166994-4167013 | Msa0625170:intron | 25.0% |
| ! | GAATTGTGAATGAAATTATC+AGG | + | chr4_3:4167175-4167194 | Msa0625170:CDS | 25.0% |
| ! | AATTGCAAAACATACCTATA+CGG | - | chr4_3:4167237-4167256 | None:intergenic | 25.0% |
| TCAAATCTATCAGACTTGAA+AGG | - | chr4_3:4157468-4157487 | None:intergenic | 30.0% | |
| ! | TGAGAATAGGTTTGAAACAA+CGG | + | chr4_3:4157953-4157972 | Msa0625170:intron | 30.0% |
| TGAAAACAACTTATGACACT+GGG | - | chr4_3:4158227-4158246 | None:intergenic | 30.0% | |
| ATGAAAACAACTTATGACAC+TGG | - | chr4_3:4158228-4158247 | None:intergenic | 30.0% | |
| ! | AGTAGCATAACTTTTGTGAT+GGG | - | chr4_3:4158258-4158277 | None:intergenic | 30.0% |
| ! | TAGTAGCATAACTTTTGTGA+TGG | - | chr4_3:4158259-4158278 | None:intergenic | 30.0% |
| TTATACATGTGACACATGTT+TGG | - | chr4_3:4158303-4158322 | None:intergenic | 30.0% | |
| AAATTCTTCACTTATTGGAG+TGG | - | chr4_3:4158537-4158556 | None:intergenic | 30.0% | |
| ATAGTTTCTTGTTGCTAACA+AGG | + | chr4_3:4158576-4158595 | Msa0625170:intron | 30.0% | |
| ATGAATAACATGATTGACAG+AGG | - | chr4_3:4158748-4158767 | None:intergenic | 30.0% | |
| !! | TTGTTTCTAGTTCGTATACT+TGG | + | chr4_3:4158786-4158805 | Msa0625170:intron | 30.0% |
| AACCATGTAGATCATAATAG+AGG | - | chr4_3:4158848-4158867 | None:intergenic | 30.0% | |
| TTATCTGCTATCTAGCATAA+AGG | - | chr4_3:4158880-4158899 | None:intergenic | 30.0% | |
| ! | ATAATCTAAGACTTGTGTTG+AGG | + | chr4_3:4158896-4158915 | Msa0625170:intron | 30.0% |
| TAGATACTTAGACGACTAAA+TGG | - | chr4_3:4159038-4159057 | None:intergenic | 30.0% | |
| TTAGTCGTCTAAGTATCTAA+TGG | + | chr4_3:4159039-4159058 | Msa0625170:intron | 30.0% | |
| ATAAGACATACCCAACAAAT+AGG | - | chr4_3:4159070-4159089 | None:intergenic | 30.0% | |
| CATAATTGCTTAATTTCCTG+GGG | - | chr4_3:4159191-4159210 | None:intergenic | 30.0% | |
| GCATAATTGCTTAATTTCCT+GGG | - | chr4_3:4159192-4159211 | None:intergenic | 30.0% | |
| TGCATAATTGCTTAATTTCC+TGG | - | chr4_3:4159193-4159212 | None:intergenic | 30.0% | |
| TGTTGTTGTATCAACTATCT+AGG | - | chr4_3:4159740-4159759 | None:intergenic | 30.0% | |
| ! | AGATAGTTGATACAACAACA+CGG | + | chr4_3:4159740-4159759 | Msa0625170:intron | 30.0% |
| ! | GACATATTGTCGTTTATTAG+GGG | - | chr4_3:4160051-4160070 | None:intergenic | 30.0% |
| ! | CGACATATTGTCGTTTATTA+GGG | - | chr4_3:4160052-4160071 | None:intergenic | 30.0% |
| ATTTAACGTCTAACACTAAC+TGG | + | chr4_3:4160122-4160141 | Msa0625170:intron | 30.0% | |
| ! | GCCTATTGATGATTTATAGA+TGG | - | chr4_3:4160193-4160212 | None:intergenic | 30.0% |
| GTGCATGAAAAATTTGATGA+TGG | - | chr4_3:4160246-4160265 | None:intergenic | 30.0% | |
| ! | TGAAAATTTTCAGAATTCGG+AGG | + | chr4_3:4160457-4160476 | Msa0625170:intron | 30.0% |
| ! | TATCGATTGGTATTGTATAC+AGG | - | chr4_3:4160516-4160535 | None:intergenic | 30.0% |
| !! | ACTAGTTTCACATAGAGTTT+TGG | - | chr4_3:4160721-4160740 | None:intergenic | 30.0% |
| AAAACTCTATGTGAAACTAG+TGG | + | chr4_3:4160720-4160739 | Msa0625170:intron | 30.0% | |
| TAAATGCAGAAAAGCTTGAA+GGG | - | chr4_3:4160765-4160784 | None:intergenic | 30.0% | |
| TTAAATGCAGAAAAGCTTGA+AGG | - | chr4_3:4160766-4160785 | None:intergenic | 30.0% | |
| ACAAAACACCAATTGTCTAA+TGG | + | chr4_3:4160862-4160881 | Msa0625170:intron | 30.0% | |
| CTCAAAATACTTAAGCAAAG+AGG | - | chr4_3:4160929-4160948 | None:intergenic | 30.0% | |
| ! | CTCTTTGCTTAAGTATTTTG+AGG | + | chr4_3:4160927-4160946 | Msa0625170:intron | 30.0% |
| !! | AAATGTATGCGAAGAGTATT+TGG | - | chr4_3:4160985-4161004 | None:intergenic | 30.0% |
| GAGGATGAAGCTAAAATATT+AGG | - | chr4_3:4161042-4161061 | None:intergenic | 30.0% | |
| !! | ATCAGCTTTTTCTGTATAGA+AGG | - | chr4_3:4161239-4161258 | None:intergenic | 30.0% |
| TAAATGTCATAGAACTTCCA+AGG | + | chr4_3:4161370-4161389 | Msa0625170:intron | 30.0% | |
| TACAGAAAAACCATCAGAAT+CGG | - | chr4_3:4161507-4161526 | None:intergenic | 30.0% | |
| ! | TCTGATGGTTTTTCTGTAAA+TGG | + | chr4_3:4161509-4161528 | Msa0625170:CDS | 30.0% |
| ! | TTTTTCTGTAAATGGTACAC+TGG | + | chr4_3:4161517-4161536 | Msa0625170:CDS | 30.0% |
| ACATAAAGAAATATCAGACC+TGG | + | chr4_3:4161547-4161566 | Msa0625170:CDS | 30.0% | |
| TTTCAGCCCTTAAAAAACTT+GGG | + | chr4_3:4161819-4161838 | Msa0625170:CDS | 30.0% | |
| !! | TGAGTAGTTGTTCTAAAACT+AGG | + | chr4_3:4162506-4162525 | Msa0625170:intron | 30.0% |
| ATTGTGTGTGAAAAAACAGA+TGG | + | chr4_3:4162612-4162631 | Msa0625170:intron | 30.0% | |
| GAAAAATCATAGACTAAAGG+TGG | - | chr4_3:4162666-4162685 | None:intergenic | 30.0% | |
| CAGGAAAAATCATAGACTAA+AGG | - | chr4_3:4162669-4162688 | None:intergenic | 30.0% | |
| TGGAAACAAAATTGTACGAA+TGG | + | chr4_3:4163078-4163097 | Msa0625170:CDS | 30.0% | |
| TATCATTCTTATAGGGATCT+TGG | - | chr4_3:4163201-4163220 | None:intergenic | 30.0% | |
| CTACGGTTATCATTCTTATA+GGG | - | chr4_3:4163208-4163227 | None:intergenic | 30.0% | |
| TCTACGGTTATCATTCTTAT+AGG | - | chr4_3:4163209-4163228 | None:intergenic | 30.0% | |
| AGCTGACATGTATATAAGTA+TGG | + | chr4_3:4163375-4163394 | Msa0625170:CDS | 30.0% | |
| GACATGTATATAAGTATGGA+AGG | + | chr4_3:4163379-4163398 | Msa0625170:CDS | 30.0% | |
| TATAAGTATGGAAGGAAATG+CGG | + | chr4_3:4163387-4163406 | Msa0625170:CDS | 30.0% | |
| ! | AATCTGATTCTGTAGTCTTA+TGG | + | chr4_3:4163687-4163706 | Msa0625170:intron | 30.0% |
| !!! | TCGAATGTTGGCTAATTTTT+TGG | + | chr4_3:4163801-4163820 | Msa0625170:intron | 30.0% |
| ! | GGATGTGAAATTGGTAATTA+AGG | + | chr4_3:4163822-4163841 | Msa0625170:intron | 30.0% |
| !! | GGATTCTGAGAATATTTTCT+TGG | + | chr4_3:4163843-4163862 | Msa0625170:intron | 30.0% |
| !! | TTCTTGGTAACCAATTTTTG+TGG | + | chr4_3:4163859-4163878 | Msa0625170:intron | 30.0% |
| GCAGAAAATTGAAACTCTTA+CGG | + | chr4_3:4163898-4163917 | Msa0625170:intron | 30.0% | |
| AAAAAAGTTGACGTGTAACT+AGG | - | chr4_3:4164123-4164142 | None:intergenic | 30.0% | |
| ! | TTTTGTTGAGTTTTACATGC+CGG | + | chr4_3:4164174-4164193 | Msa0625170:intron | 30.0% |
| !! | TATCTATCTCCTGGTTTTTA+TGG | + | chr4_3:4164202-4164221 | Msa0625170:intron | 30.0% |
| GTAAAAAAGTTGTCTACCTA+GGG | - | chr4_3:4164284-4164303 | None:intergenic | 30.0% | |
| TGTAAAAAAGTTGTCTACCT+AGG | - | chr4_3:4164285-4164304 | None:intergenic | 30.0% | |
| AGTTGAAGCATAAACAGAAA+CGG | - | chr4_3:4164533-4164552 | None:intergenic | 30.0% | |
| AGACTGTTATGTTATTATCC+AGG | + | chr4_3:4164571-4164590 | Msa0625170:intron | 30.0% | |
| AAACATATCTGCTGCTATAT+TGG | - | chr4_3:4164624-4164643 | None:intergenic | 30.0% | |
| ! | CCTTAAACTTTGGTTTAGTT+TGG | - | chr4_3:4165073-4165092 | None:intergenic | 30.0% |
| CCAAACTAAACCAAAGTTTA+AGG | + | chr4_3:4165070-4165089 | Msa0625170:intron | 30.0% | |
| TAAACAAGATGTTTCGAAGT+TGG | - | chr4_3:4165408-4165427 | None:intergenic | 30.0% | |
| AAATTTGGGAGCCTTTAATA+TGG | + | chr4_3:4165472-4165491 | Msa0625170:intron | 30.0% | |
| !!! | ACTTCCTTTTTTTTGGTTTG+TGG | + | chr4_3:4165552-4165571 | Msa0625170:intron | 30.0% |
| TTTATTCACCTCATTCTACA+TGG | + | chr4_3:4165871-4165890 | Msa0625170:intron | 30.0% | |
| TTATTCACCTCATTCTACAT+GGG | + | chr4_3:4165872-4165891 | Msa0625170:intron | 30.0% | |
| TGTTACTGAAATGACCAAAA+AGG | + | chr4_3:4165956-4165975 | Msa0625170:intron | 30.0% | |
| GTTACTGAAATGACCAAAAA+GGG | + | chr4_3:4165957-4165976 | Msa0625170:intron | 30.0% | |
| ! | ATCATGTTGTTAACCCTTTT+TGG | - | chr4_3:4165973-4165992 | None:intergenic | 30.0% |
| AAGGGTTAACAACATGATAT+TGG | + | chr4_3:4165975-4165994 | Msa0625170:intron | 30.0% | |
| GATGATATGAATTTCGAGAT+GGG | - | chr4_3:4166090-4166109 | None:intergenic | 30.0% | |
| AGATGATATGAATTTCGAGA+TGG | - | chr4_3:4166091-4166110 | None:intergenic | 30.0% | |
| AAGAAGAGATAGAAGAAGAA+AGG | + | chr4_3:4166330-4166349 | Msa0625170:intron | 30.0% | |
| TTGTTGCGATATACAAAGAA+AGG | + | chr4_3:4166358-4166377 | Msa0625170:intron | 30.0% | |
| TGTTGCGATATACAAAGAAA+GGG | + | chr4_3:4166359-4166378 | Msa0625170:intron | 30.0% | |
| ATTACAGGTAGAGAAGAAAA+AGG | + | chr4_3:4166392-4166411 | Msa0625170:intron | 30.0% | |
| GCATTTCACATGTATTTATC+TGG | - | chr4_3:4166582-4166601 | None:intergenic | 30.0% | |
| TAAATACATGTGAAATGCAC+AGG | + | chr4_3:4166584-4166603 | Msa0625170:intron | 30.0% | |
| !! | CTAAAGTGTTTTTGAAAGGA+CGG | - | chr4_3:4166728-4166747 | None:intergenic | 30.0% |
| GTCCTTTCAAAAACACTTTA+GGG | + | chr4_3:4166727-4166746 | Msa0625170:intron | 30.0% | |
| GGGCACATTTATTTACTTAT+TGG | + | chr4_3:4166747-4166766 | Msa0625170:intron | 30.0% | |
| !!! | TGTGGAGAATTTTCTGAAAT+GGG | - | chr4_3:4166792-4166811 | None:intergenic | 30.0% |
| !! | TTGTGGAGAATTTTCTGAAA+TGG | - | chr4_3:4166793-4166812 | None:intergenic | 30.0% |
| !!! | TGTGGAGAATTTTCTGAAAT+GGG | - | chr4_3:4166792-4166811 | None:intergenic | 30.0% |
| !! | TTGTGGAGAATTTTCTGAAA+TGG | - | chr4_3:4166793-4166812 | None:intergenic | 30.0% |
| ! | ATTCTAAAGAGCAATACATG+CGG | - | chr4_3:4166961-4166980 | None:intergenic | 30.0% |
| !!! | TAACGTTGTGCAGTTTTATT+TGG | + | chr4_3:4167092-4167111 | Msa0625170:intron | 30.0% |
| TGTGAATGAAATTATCAGGA+AGG | + | chr4_3:4167179-4167198 | Msa0625170:CDS | 30.0% | |
| AAATGCAGATAGAATGTTGA+TGG | - | chr4_3:4167279-4167298 | None:intergenic | 30.0% | |
| TCATTAAACCATTCATCTTC+AGG | - | chr4_3:4167388-4167407 | None:intergenic | 30.0% | |
| TGAAATATGTCAAGATGCTA+TGG | + | chr4_3:4167405-4167424 | Msa0625170:CDS | 30.0% | |
| AAGATTAAGTGGAAAACCAA+AGG | + | chr4_3:4167429-4167448 | Msa0625170:CDS | 30.0% | |
| GGAAAACCAAAGGAAATAAA+CGG | + | chr4_3:4167439-4167458 | Msa0625170:CDS | 30.0% | |
| GAAAACCAAAGGAAATAAAC+GGG | + | chr4_3:4167440-4167459 | Msa0625170:CDS | 30.0% | |
| AAAACCAAAGGAAATAAACG+GGG | + | chr4_3:4167441-4167460 | Msa0625170:CDS | 30.0% | |
| TTGGACTGTACTAATTTACA+GGG | - | chr4_3:4167557-4167576 | None:intergenic | 30.0% | |
| ATTGGACTGTACTAATTTAC+AGG | - | chr4_3:4167558-4167577 | None:intergenic | 30.0% | |
| CCAGTAATTTCATGATAGAT+TGG | - | chr4_3:4167576-4167595 | None:intergenic | 30.0% | |
| CCAATCTATCATGAAATTAC+TGG | + | chr4_3:4167573-4167592 | Msa0625170:three_prime_UTR | 30.0% | |
| !!! | ATTTTTTGTCCCGTCAAATT+TGG | + | chr4_3:4167724-4167743 | Msa0625170:three_prime_UTR | 30.0% |
| AATGGAGTTAAGCTTGAAGA+AGG | + | chr4_3:4157435-4157454 | Msa0625170:CDS | 35.0% | |
| AACCTTATCATTGAGAGAAG+AGG | - | chr4_3:4157514-4157533 | None:intergenic | 35.0% | |
| GCAAGAAACAATGGATCAAA+GGG | - | chr4_3:4157537-4157556 | None:intergenic | 35.0% | |
| AGCAAGAAACAATGGATCAA+AGG | - | chr4_3:4157538-4157557 | None:intergenic | 35.0% | |
| GTAATCGAAGCAAGAAACAA+TGG | - | chr4_3:4157546-4157565 | None:intergenic | 35.0% | |
| ! | GCTTTCATTTTCCATTCATC+AGG | + | chr4_3:4157568-4157587 | Msa0625170:intron | 35.0% |
| ! | GAGAATAGGTTTGAAACAAC+GGG | + | chr4_3:4157954-4157973 | Msa0625170:intron | 35.0% |
| ! | AGAATAGGTTTGAAACAACG+GGG | + | chr4_3:4157955-4157974 | Msa0625170:intron | 35.0% |
| AAAATAAGCCCAGAAAAGCT+TGG | + | chr4_3:4158120-4158139 | Msa0625170:intron | 35.0% | |
| AAATAAGCCCAGAAAAGCTT+GGG | + | chr4_3:4158121-4158140 | Msa0625170:intron | 35.0% | |
| ! | CAATTTTCCCAAGCTTTTCT+GGG | - | chr4_3:4158131-4158150 | None:intergenic | 35.0% |
| ! | ACAATTTTCCCAAGCTTTTC+TGG | - | chr4_3:4158132-4158151 | None:intergenic | 35.0% |
| AAATCCCAATCCAAACAAAC+AGG | + | chr4_3:4158201-4158220 | Msa0625170:intron | 35.0% | |
| ACGCCTTTGATAGAAAATGT+TGG | - | chr4_3:4158328-4158347 | None:intergenic | 35.0% | |
| ! | AGATGAAGCATCTAACATGT+TGG | - | chr4_3:4158448-4158467 | None:intergenic | 35.0% |
| !! | GCTAACAAGGTTCTAAATTG+TGG | + | chr4_3:4158589-4158608 | Msa0625170:intron | 35.0% |
| ! | GTTCTAAATTGTGGTTGCTA+TGG | + | chr4_3:4158598-4158617 | Msa0625170:intron | 35.0% |
| TTCGTATACTTGGTTGAACA+GGG | + | chr4_3:4158796-4158815 | Msa0625170:intron | 35.0% | |
| TGCCTCTATTATGATCTACA+TGG | + | chr4_3:4158843-4158862 | Msa0625170:intron | 35.0% | |
| ! | GAACATAGTGAAAGAGTACA+AGG | + | chr4_3:4158949-4158968 | Msa0625170:intron | 35.0% |
| GACTACATGGTTATCACAAT+TGG | - | chr4_3:4158980-4158999 | None:intergenic | 35.0% | |
| AATGGAAAATTGCGACTACA+TGG | - | chr4_3:4158993-4159012 | None:intergenic | 35.0% | |
| !! | ATGTCTTATTTACACCATGC+AGG | + | chr4_3:4159081-4159100 | Msa0625170:intron | 35.0% |
| !! | TGTCTTATTTACACCATGCA+GGG | + | chr4_3:4159082-4159101 | Msa0625170:intron | 35.0% |
| AACACAAACTAACCGTATGA+AGG | - | chr4_3:4159285-4159304 | None:intergenic | 35.0% | |
| CTAGTAAAGAAAGTGGTTCA+AGG | + | chr4_3:4159342-4159361 | Msa0625170:intron | 35.0% | |
| TTTGATCTTGTGAAGCAAAG+AGG | + | chr4_3:4159409-4159428 | Msa0625170:intron | 35.0% | |
| !! | AAGCAAAGAGGTTGTTTTCA+AGG | + | chr4_3:4159421-4159440 | Msa0625170:intron | 35.0% |
| ! | GCGACATATTGTCGTTTATT+AGG | - | chr4_3:4160053-4160072 | None:intergenic | 35.0% |
| ! | TTTTTGGATGGTGAGAATGA+GGG | - | chr4_3:4160160-4160179 | None:intergenic | 35.0% |
| !! | ATTTTTGGATGGTGAGAATG+AGG | - | chr4_3:4160161-4160180 | None:intergenic | 35.0% |
| ! | AGATGGAAGTTACGCATTTT+TGG | - | chr4_3:4160176-4160195 | None:intergenic | 35.0% |
| ACTCTACCAATTCAAGAAGT+TGG | + | chr4_3:4160214-4160233 | Msa0625170:intron | 35.0% | |
| TAGTGACCAACTTCTTGAAT+TGG | - | chr4_3:4160223-4160242 | None:intergenic | 35.0% | |
| AAAAGAAGACACCCAATTGT+GGG | - | chr4_3:4160283-4160302 | None:intergenic | 35.0% | |
| AAAAAGAAGACACCCAATTG+TGG | - | chr4_3:4160284-4160303 | None:intergenic | 35.0% | |
| ! | ATACGTTTGGAATACTGCTT+TGG | - | chr4_3:4160420-4160439 | None:intergenic | 35.0% |
| AAGCAGTATTCCAAACGTAT+AGG | + | chr4_3:4160420-4160439 | Msa0625170:intron | 35.0% | |
| ! | GAAATATTGGCCTATACGTT+TGG | - | chr4_3:4160433-4160452 | None:intergenic | 35.0% |
| ATACCAATCGATACCTGTAT+AGG | + | chr4_3:4160523-4160542 | Msa0625170:intron | 35.0% | |
| ACAAGTGCACATATTAGTGT+CGG | + | chr4_3:4160559-4160578 | Msa0625170:intron | 35.0% | |
| ! | ATTTTCACATTCGACGATGT+GGG | + | chr4_3:4160675-4160694 | Msa0625170:intron | 35.0% |
| TAGTGGCTACATAATTCCAT+TGG | + | chr4_3:4160737-4160756 | Msa0625170:intron | 35.0% | |
| !! | TATGCGAAGAGTATTTGGAT+TGG | - | chr4_3:4160980-4160999 | None:intergenic | 35.0% |
| TTCTAAATCGGATATCTCCT+TGG | - | chr4_3:4161390-4161409 | None:intergenic | 35.0% | |
| AAGGAGATATCCGATTTAGA+AGG | + | chr4_3:4161389-4161408 | Msa0625170:CDS | 35.0% | |
| TGAAAGCTCACCTTCTAAAT+CGG | - | chr4_3:4161402-4161421 | None:intergenic | 35.0% | |
| TTATCGATATCCGATTCTGA+TGG | + | chr4_3:4161494-4161513 | Msa0625170:CDS | 35.0% | |
| AAATATCAGACCTGGACAAA+TGG | + | chr4_3:4161555-4161574 | Msa0625170:CDS | 35.0% | |
| ! | AGTTGAGTTTCCTGATCTTT+TGG | + | chr4_3:4161580-4161599 | Msa0625170:CDS | 35.0% |
| AAGAGAACATCCAAAAGATC+AGG | - | chr4_3:4161593-4161612 | None:intergenic | 35.0% | |
| ! | TGATCTTTTGGATGTTCTCT+TGG | + | chr4_3:4161592-4161611 | Msa0625170:CDS | 35.0% |
| AGAATTCTATTACCGAACGT+AGG | + | chr4_3:4161723-4161742 | Msa0625170:CDS | 35.0% | |
| ! | AGCTAATTTTTGCCTACGTT+CGG | - | chr4_3:4161738-4161757 | None:intergenic | 35.0% |
| GTTTCAGCCCTTAAAAAACT+TGG | + | chr4_3:4161818-4161837 | Msa0625170:CDS | 35.0% | |
| TTCAGCCCTTAAAAAACTTG+GGG | + | chr4_3:4161820-4161839 | Msa0625170:CDS | 35.0% | |
| !!! | ACCATCCCCAAGTTTTTTAA+GGG | - | chr4_3:4161828-4161847 | None:intergenic | 35.0% |
| AGTATAACATGCAAAGTCTC+CGG | + | chr4_3:4161894-4161913 | Msa0625170:CDS | 35.0% | |
| !! | AGTGACTCATTGGCTATTTT+TGG | + | chr4_3:4161995-4162014 | Msa0625170:CDS | 35.0% |
| ACAAGTTCAGAAGAATATGC+TGG | - | chr4_3:4162028-4162047 | None:intergenic | 35.0% | |
| ATTCTTCTGAACTTGTGATG+TGG | + | chr4_3:4162032-4162051 | Msa0625170:CDS | 35.0% | |
| TTCTTCTGAACTTGTGATGT+GGG | + | chr4_3:4162033-4162052 | Msa0625170:CDS | 35.0% | |
| GAGTGTGTTCAAATAGCATT+GGG | + | chr4_3:4162145-4162164 | Msa0625170:CDS | 35.0% | |
| TCTAATGCTTGTTCAACACT+AGG | - | chr4_3:4162235-4162254 | None:intergenic | 35.0% | |
| CATATCCTCCTAATGCTAAT+CGG | + | chr4_3:4162320-4162339 | Msa0625170:CDS | 35.0% | |
| TTGAAATGCTGTTGTACTAC+CGG | - | chr4_3:4162350-4162369 | None:intergenic | 35.0% | |
| AACCATCAAATTGAAGCGAT+GGG | - | chr4_3:4162392-4162411 | None:intergenic | 35.0% | |
| !!! | TCAGGTGAGACTTTTAGTTT+TGG | + | chr4_3:4162411-4162430 | Msa0625170:intron | 35.0% |
| !! | AAAAGCACTACCAGAATCAA+TGG | + | chr4_3:4163030-4163049 | Msa0625170:CDS | 35.0% |
| CTTATAGGGATCTTGGTTTA+GGG | - | chr4_3:4163194-4163213 | None:intergenic | 35.0% | |
| TCTTATAGGGATCTTGGTTT+AGG | - | chr4_3:4163195-4163214 | None:intergenic | 35.0% | |
| AAAATCGTCATCCTGAACAA+CGG | + | chr4_3:4163245-4163264 | Msa0625170:CDS | 35.0% | |
| ! | TTTGAGCCTGATTTTTACAG+AGG | + | chr4_3:4163333-4163352 | Msa0625170:CDS | 35.0% |
| !! | GATTCCGTCTTTGATTTTTC+AGG | + | chr4_3:4163423-4163442 | Msa0625170:CDS | 35.0% |
| !!! | TTTTCAGGTATAATGGAACC+TGG | + | chr4_3:4163438-4163457 | Msa0625170:intron | 35.0% |
| ! | TTTCAGGTATAATGGAACCT+GGG | + | chr4_3:4163439-4163458 | Msa0625170:intron | 35.0% |
| TCGATGAAGAATGAACAAGA+AGG | - | chr4_3:4163518-4163537 | None:intergenic | 35.0% | |
| GATATGTGTAACGAGGAAAA+AGG | + | chr4_3:4163659-4163678 | Msa0625170:intron | 35.0% | |
| AAGACTACAGAATCAGATTC+TGG | - | chr4_3:4163686-4163705 | None:intergenic | 35.0% | |
| ! | TTTGTTGAGTTTTACATGCC+GGG | + | chr4_3:4164175-4164194 | Msa0625170:intron | 35.0% |
| TATTCCACTCCATAAAAACC+AGG | - | chr4_3:4164214-4164233 | None:intergenic | 35.0% | |
| !!! | TTTTACATCTTAGTGGGTTC+AGG | + | chr4_3:4164298-4164317 | Msa0625170:intron | 35.0% |
| !! | TCAGTTTTATGAAAAGCTCC+TGG | - | chr4_3:4164592-4164611 | None:intergenic | 35.0% |
| ATAGCAGCAGATATGTTTGT+AGG | + | chr4_3:4164626-4164645 | Msa0625170:CDS | 35.0% | |
| TAGCAGCAGATATGTTTGTA+GGG | + | chr4_3:4164627-4164646 | Msa0625170:CDS | 35.0% | |
| ! | TTTCAGAAGATCAGAGCTTT+TGG | + | chr4_3:4164708-4164727 | Msa0625170:CDS | 35.0% |
| ! | TTCAGAAGATCAGAGCTTTT+GGG | + | chr4_3:4164709-4164728 | Msa0625170:CDS | 35.0% |
| !!! | TTTTGGGATGATATTGAGGA+AGG | + | chr4_3:4164725-4164744 | Msa0625170:CDS | 35.0% |
| ! | TTTGGGATGATATTGAGGAA+GGG | + | chr4_3:4164726-4164745 | Msa0625170:CDS | 35.0% |
| CTGAAACACTGATACCTAAT+AGG | + | chr4_3:4164839-4164858 | Msa0625170:intron | 35.0% | |
| GAATCAATTCGTGTCCTATT+AGG | - | chr4_3:4164856-4164875 | None:intergenic | 35.0% | |
| ! | TGTTTAAACCACTGGTTGTT+AGG | - | chr4_3:4164973-4164992 | None:intergenic | 35.0% |
| TTTGGATACTCTGCATTCTT+CGG | - | chr4_3:4165055-4165074 | None:intergenic | 35.0% | |
| AAGAAACTTAGCTGTGTATG+TGG | - | chr4_3:4165196-4165215 | None:intergenic | 35.0% | |
| AATTTAAAGAGGTTCACTGG+TGG | - | chr4_3:4165515-4165534 | None:intergenic | 35.0% | |
| GGTAATTTAAAGAGGTTCAC+TGG | - | chr4_3:4165518-4165537 | None:intergenic | 35.0% | |
| ACCAAAAAAAAGGAAGTGAC+CGG | - | chr4_3:4165549-4165568 | None:intergenic | 35.0% | |
| TCATAACACTCTTTCCAAAC+TGG | + | chr4_3:4165718-4165737 | Msa0625170:intron | 35.0% | |
| CAAATTTCCCATGTAGAATG+AGG | - | chr4_3:4165882-4165901 | None:intergenic | 35.0% | |
| TTTGTGTTTGTCAATGGATC+TGG | - | chr4_3:4166020-4166039 | None:intergenic | 35.0% | |
| ACATCTCAACCAAAAAAGAG+AGG | + | chr4_3:4166171-4166190 | Msa0625170:intron | 35.0% | |
| GAACCGAATCCAAAACTTAA+TGG | + | chr4_3:4166261-4166280 | Msa0625170:intron | 35.0% | |
| ! | TGCTGCAAACCATTAAGTTT+TGG | - | chr4_3:4166273-4166292 | None:intergenic | 35.0% |
| GTTGCGATATACAAAGAAAG+GGG | + | chr4_3:4166360-4166379 | Msa0625170:intron | 35.0% | |
| AAGGGGATGAAAATGATTAC+AGG | + | chr4_3:4166377-4166396 | Msa0625170:intron | 35.0% | |
| ! | ATTTTCTTTGAACCGGTTGT+AGG | + | chr4_3:4166471-4166490 | Msa0625170:intron | 35.0% |
| TTGTAGGAGGTCAAATTAGA+GGG | + | chr4_3:4166487-4166506 | Msa0625170:intron | 35.0% | |
| !! | CAATTTTAAGGGTCCATCAA+TGG | - | chr4_3:4166514-4166533 | None:intergenic | 35.0% |
| ! | TTGATGGACCCTTAAAATTG+AGG | + | chr4_3:4166514-4166533 | Msa0625170:intron | 35.0% |
| TTTAATGGGAGCCCTTAATA+TGG | - | chr4_3:4166541-4166560 | None:intergenic | 35.0% | |
| TGTTCATTGTATCAAGCACA+TGG | + | chr4_3:4166664-4166683 | Msa0625170:intron | 35.0% | |
| CGTCCTTTCAAAAACACTTT+AGG | + | chr4_3:4166726-4166745 | Msa0625170:intron | 35.0% | |
| !! | TGCCCTAAAGTGTTTTTGAA+AGG | - | chr4_3:4166732-4166751 | None:intergenic | 35.0% |
| !!! | GAATTTTCTGAAATGGGTGT+TGG | - | chr4_3:4166786-4166805 | None:intergenic | 35.0% |
| !!! | GAATTTTCTGAAATGGGTGT+TGG | - | chr4_3:4166786-4166805 | None:intergenic | 35.0% |
| !! | AGAATGTTGATGGTGAAACA+TGG | - | chr4_3:4167269-4167288 | None:intergenic | 35.0% |
| GCATTTGCAATTGTTTCCAT+TGG | + | chr4_3:4167293-4167312 | Msa0625170:intron | 35.0% | |
| ATTGTTTCCATTGGAAGTTG+TGG | + | chr4_3:4167302-4167321 | Msa0625170:intron | 35.0% | |
| GATGCTATGGAAAGATTAAG+TGG | + | chr4_3:4167418-4167437 | Msa0625170:CDS | 35.0% | |
| TCTCCTTCGTGATCTTGTTA+TGG | + | chr4_3:4157353-4157372 | Msa0625170:exon | 40.0% | |
| CGATGATGAAGTCATCTTCA+CGG | + | chr4_3:4157382-4157401 | Msa0625170:CDS | 40.0% | |
| CTTATCATTGAGAGAAGAGG+TGG | - | chr4_3:4157511-4157530 | None:intergenic | 40.0% | |
| CACCTCTTCTCTCAATGATA+AGG | + | chr4_3:4157509-4157528 | Msa0625170:CDS | 40.0% | |
| CATGTGACACATGTTTGGAT+TGG | - | chr4_3:4158298-4158317 | None:intergenic | 40.0% | |
| CACTGATATGTGTCGAACAT+GGG | - | chr4_3:4158353-4158372 | None:intergenic | 40.0% | |
| ACACTGATATGTGTCGAACA+TGG | - | chr4_3:4158354-4158373 | None:intergenic | 40.0% | |
| TGAAGGTAATCACGTGTGTT+GGG | - | chr4_3:4158393-4158412 | None:intergenic | 40.0% | |
| TTGAAGGTAATCACGTGTGT+TGG | - | chr4_3:4158394-4158413 | None:intergenic | 40.0% | |
| CAATTGCGACAACAAGATAC+AGG | - | chr4_3:4158669-4158688 | None:intergenic | 40.0% | |
| GGATATTAGCTGGTATCATC+TGG | - | chr4_3:4158727-4158746 | None:intergenic | 40.0% | |
| GATTGACAGAGGATATTAGC+TGG | - | chr4_3:4158737-4158756 | None:intergenic | 40.0% | |
| GTTCGTATACTTGGTTGAAC+AGG | + | chr4_3:4158795-4158814 | Msa0625170:intron | 40.0% | |
| ! | CTCTTTTTCTCTTTTTCCCC+AGG | + | chr4_3:4159172-4159191 | Msa0625170:intron | 40.0% |
| CTAACTATGCAGCCTTCATA+CGG | + | chr4_3:4159270-4159289 | Msa0625170:CDS | 40.0% | |
| GGTACAAACACATCTTTCTC+TGG | + | chr4_3:4159971-4159990 | Msa0625170:intron | 40.0% | |
| ! | TTTTGGATGGTGAGAATGAG+GGG | - | chr4_3:4160159-4160178 | None:intergenic | 40.0% |
| !! | GGAAGTTACGCATTTTTGGA+TGG | - | chr4_3:4160172-4160191 | None:intergenic | 40.0% |
| TCATGACATGATGAAGAGCA+AGG | + | chr4_3:4160349-4160368 | Msa0625170:intron | 40.0% | |
| !! | CTTCCTATACAGGTATCGAT+TGG | - | chr4_3:4160529-4160548 | None:intergenic | 40.0% |
| GTGCAATACTCTTCCTATAC+AGG | - | chr4_3:4160539-4160558 | None:intergenic | 40.0% | |
| ! | GCACATATTAGTGTCGGATA+CGG | + | chr4_3:4160565-4160584 | Msa0625170:intron | 40.0% |
| ! | CACATATTAGTGTCGGATAC+GGG | + | chr4_3:4160566-4160585 | Msa0625170:intron | 40.0% |
| ! | GATTTTCACATTCGACGATG+TGG | + | chr4_3:4160674-4160693 | Msa0625170:intron | 40.0% |
| ! | TTTTCACATTCGACGATGTG+GGG | + | chr4_3:4160676-4160695 | Msa0625170:intron | 40.0% |
| !! | AGAGTTTTGGCAATACGAAG+TGG | - | chr4_3:4160708-4160727 | None:intergenic | 40.0% |
| ! | TTGGATTTGCTCAAAGCATG+CGG | + | chr4_3:4160803-4160822 | Msa0625170:intron | 40.0% |
| CCACTTTGCCATTAGACAAT+TGG | - | chr4_3:4160873-4160892 | None:intergenic | 40.0% | |
| CCAATTGTCTAATGGCAAAG+TGG | + | chr4_3:4160870-4160889 | Msa0625170:intron | 40.0% | |
| ! | AGGAAGTACAATCCAGAACT+GGG | - | chr4_3:4160909-4160928 | None:intergenic | 40.0% |
| !! | TATTTTGAGGGTGCAGAAGA+GGG | + | chr4_3:4160940-4160959 | Msa0625170:intron | 40.0% |
| GAGAATTATCTCCCTGTATG+TGG | + | chr4_3:4161148-4161167 | Msa0625170:intron | 40.0% | |
| CCAGATTTACACCACATACA+GGG | - | chr4_3:4161162-4161181 | None:intergenic | 40.0% | |
| CCTGTATGTGGTGTAAATCT+GGG | + | chr4_3:4161160-4161179 | Msa0625170:intron | 40.0% | |
| ATGTGGTGTAAATCTGGGTA+TGG | + | chr4_3:4161165-4161184 | Msa0625170:intron | 40.0% | |
| TAAATCTGGGTATGGCAGTT+GGG | + | chr4_3:4161173-4161192 | Msa0625170:intron | 40.0% | |
| AGTGGATAGTAGGTTTCTGA+TGG | - | chr4_3:4161426-4161445 | None:intergenic | 40.0% | |
| ATGTATCAAGGTTGCTTGAG+TGG | - | chr4_3:4161444-4161463 | None:intergenic | 40.0% | |
| ACTCAAGCAACCTTGATACA+TGG | + | chr4_3:4161443-4161462 | Msa0625170:CDS | 40.0% | |
| AGCAACCTTGATACATGGTT+TGG | + | chr4_3:4161448-4161467 | Msa0625170:CDS | 40.0% | |
| TGAATCGATGTGAACTCCAT+CGG | - | chr4_3:4161474-4161493 | None:intergenic | 40.0% | |
| ACTCAACTAACCATTTGTCC+AGG | - | chr4_3:4161568-4161587 | None:intergenic | 40.0% | |
| GCAGAGACAGAAGTAAAGAT+GGG | - | chr4_3:4161703-4161722 | None:intergenic | 40.0% | |
| TGCAGAGACAGAAGTAAAGA+TGG | - | chr4_3:4161704-4161723 | None:intergenic | 40.0% | |
| !!! | GACCATCCCCAAGTTTTTTA+AGG | - | chr4_3:4161829-4161848 | None:intergenic | 40.0% |
| AGTATATGCTCCTCCATATG+AGG | - | chr4_3:4161930-4161949 | None:intergenic | 40.0% | |
| !!! | CTCATTGGCTATTTTTGGTG+AGG | + | chr4_3:4162000-4162019 | Msa0625170:CDS | 40.0% |
| !! | AACAGAAGCATTTGCTCTTC+TGG | + | chr4_3:4162066-4162085 | Msa0625170:CDS | 40.0% |
| CATTTGCTCTTCTGGTGAAA+AGG | + | chr4_3:4162074-4162093 | Msa0625170:CDS | 40.0% | |
| GGAGTGTGTTCAAATAGCAT+TGG | + | chr4_3:4162144-4162163 | Msa0625170:CDS | 40.0% | |
| TGCTCATTATTAGAAGCTCG+TGG | + | chr4_3:4162172-4162191 | Msa0625170:CDS | 40.0% | |
| GAACCATCAAATTGAAGCGA+TGG | - | chr4_3:4162393-4162412 | None:intergenic | 40.0% | |
| ! | TCGCTTCAATTTGATGGTTC+AGG | + | chr4_3:4162393-4162412 | Msa0625170:CDS | 40.0% |
| AACTACTCACATTGTCCCAA+CGG | - | chr4_3:4162495-4162514 | None:intergenic | 40.0% | |
| CGTTTCCCTTATGTAGTTTG+TGG | + | chr4_3:4162856-4162875 | Msa0625170:intron | 40.0% | |
| GCTTATACAGGACTTCTTTG+AGG | + | chr4_3:4162919-4162938 | Msa0625170:intron | 40.0% | |
| !! | TCTTCTTCCTCCATTGATTC+TGG | - | chr4_3:4163043-4163062 | None:intergenic | 40.0% |
| !! | GAAGAAAGCTTTGAGGATTC+TGG | + | chr4_3:4163058-4163077 | Msa0625170:CDS | 40.0% |
| TAGTTCATCAGCCAGTAATG+AGG | - | chr4_3:4163143-4163162 | None:intergenic | 40.0% | |
| ! | ATGACGATTTTGCCTTTCTG+TGG | - | chr4_3:4163236-4163255 | None:intergenic | 40.0% |
| AAATCGTCATCCTGAACAAC+GGG | + | chr4_3:4163246-4163265 | Msa0625170:CDS | 40.0% | |
| AAATCAGGCTCAAAGCATGT+TGG | - | chr4_3:4163327-4163346 | None:intergenic | 40.0% | |
| ! | AGCCTGATTTTTACAGAGGA+TGG | + | chr4_3:4163337-4163356 | Msa0625170:CDS | 40.0% |
| CACCATCCTCTGTAAAAATC+AGG | - | chr4_3:4163342-4163361 | None:intergenic | 40.0% | |
| GAAATGCGGATGAAGTTGAA+TGG | + | chr4_3:4163401-4163420 | Msa0625170:CDS | 40.0% | |
| ACACTTCTCATGCATAACAC+TGG | - | chr4_3:4163569-4163588 | None:intergenic | 40.0% | |
| ! | CCTGCTCTTTTCTTCTTGTT+GGG | + | chr4_3:4163621-4163640 | Msa0625170:intron | 40.0% |
| TTGTTGGGAACTTCTCTGTT+GGG | + | chr4_3:4163636-4163655 | Msa0625170:intron | 40.0% | |
| AACATTCGAAACTGTGGACA+AGG | - | chr4_3:4163790-4163809 | None:intergenic | 40.0% | |
| TTGTCCACAGTTTCGAATGT+TGG | + | chr4_3:4163789-4163808 | Msa0625170:intron | 40.0% | |
| TTAGCCAACATTCGAAACTG+TGG | - | chr4_3:4163796-4163815 | None:intergenic | 40.0% | |
| ATTTCCTTCTGTGGACAAAG+AGG | - | chr4_3:4164081-4164100 | None:intergenic | 40.0% | |
| !! | ATCTCCTGGTTTTTATGGAG+TGG | + | chr4_3:4164207-4164226 | Msa0625170:intron | 40.0% |
| AGCAGATATGTTTGTAGGGA+GGG | + | chr4_3:4164631-4164650 | Msa0625170:CDS | 40.0% | |
| !!! | GAGCTTTTGGGATGATATTG+AGG | + | chr4_3:4164721-4164740 | Msa0625170:CDS | 40.0% |
| ! | ATTTGGGACGCATCTTTGTA+AGG | + | chr4_3:4164901-4164920 | Msa0625170:intron | 40.0% |
| !! | CATCTTTGTAAGGCTAGTCT+TGG | + | chr4_3:4164911-4164930 | Msa0625170:intron | 40.0% |
| TGGTTGTTAGGAACTTGGAT+AGG | - | chr4_3:4164961-4164980 | None:intergenic | 40.0% | |
| !! | CTGGTGGTCCTTTAAAATTG+AGG | - | chr4_3:4165499-4165518 | None:intergenic | 40.0% |
| ! | TAGCTTGGTAGTCTTTGTGA+AGG | - | chr4_3:4165759-4165778 | None:intergenic | 40.0% |
| TCTCAACCAAAAAAGAGAGG+AGG | + | chr4_3:4166174-4166193 | Msa0625170:intron | 40.0% | |
| !!! | GTTCTTCCTCCTCTCTTTTT+TGG | - | chr4_3:4166183-4166202 | None:intergenic | 40.0% |
| AAAAGAGAGGAGGAAGAACA+AGG | + | chr4_3:4166184-4166203 | Msa0625170:intron | 40.0% | |
| ! | GATTCGGTTCAGTGATATAC+GGG | - | chr4_3:4166251-4166270 | None:intergenic | 40.0% |
| ! | GGATTCGGTTCAGTGATATA+CGG | - | chr4_3:4166252-4166271 | None:intergenic | 40.0% |
| GGTTTGCAGCAAGTAATATG+CGG | + | chr4_3:4166282-4166301 | Msa0625170:intron | 40.0% | |
| CTAATTTGACCTCCTACAAC+CGG | - | chr4_3:4166486-4166505 | None:intergenic | 40.0% | |
| GTTGTAGGAGGTCAAATTAG+AGG | + | chr4_3:4166486-4166505 | Msa0625170:intron | 40.0% | |
| CAAATTAGAGGGACCATTGA+TGG | + | chr4_3:4166498-4166517 | Msa0625170:intron | 40.0% | |
| ! | ATGTCAGCATTTTCTGCAAC+AGG | + | chr4_3:4167204-4167223 | Msa0625170:CDS | 40.0% |
| ! | TGTCAGCATTTTCTGCAACA+GGG | + | chr4_3:4167205-4167224 | Msa0625170:CDS | 40.0% |
| TTCATAGCCACAACTTCCAA+TGG | - | chr4_3:4167312-4167331 | None:intergenic | 40.0% | |
| !! | AAAAATGAAAGGGGTGCCAA+GGG | - | chr4_3:4167658-4167677 | None:intergenic | 40.0% |
| AAACGCAAGCCAAATTTGAC+GGG | - | chr4_3:4167736-4167755 | None:intergenic | 40.0% | |
| CAAACGCAAGCCAAATTTGA+CGG | - | chr4_3:4167737-4167756 | None:intergenic | 40.0% | |
| ! | CCTTCGTGATCTTGTTATGG+CGG | + | chr4_3:4157356-4157375 | Msa0625170:exon | 45.0% |
| ATCTTCACGGTCAAGAGCTA+CGG | + | chr4_3:4157395-4157414 | Msa0625170:CDS | 45.0% | |
| GCGGCGAGTGTTAAAGAAAA+TGG | + | chr4_3:4157417-4157436 | Msa0625170:CDS | 45.0% | |
| ! | TTTGAAACAACGGGGCTGTT+TGG | + | chr4_3:4157963-4157982 | Msa0625170:intron | 45.0% |
| TGGGCCTGTTTGTTTGGATT+GGG | - | chr4_3:4158208-4158227 | None:intergenic | 45.0% | |
| GAAGGTAATCACGTGTGTTG+GGG | - | chr4_3:4158392-4158411 | None:intergenic | 45.0% | |
| CAAGATACAGGCAGGTTTGA+GGG | - | chr4_3:4158657-4158676 | None:intergenic | 45.0% | |
| ACAAGATACAGGCAGGTTTG+AGG | - | chr4_3:4158658-4158677 | None:intergenic | 45.0% | |
| TCGCAATTGCAGTTGTTGAC+CGG | + | chr4_3:4158680-4158699 | Msa0625170:intron | 45.0% | |
| CAAGAAATCTTCTCCCTGCA+TGG | - | chr4_3:4159098-4159117 | None:intergenic | 45.0% | |
| !! | CAAAGCATCACCTTGCTGTT+CGG | + | chr4_3:4159462-4159481 | Msa0625170:intron | 45.0% |
| TATCATCGGCATAGTGCACT+AGG | - | chr4_3:4159513-4159532 | None:intergenic | 45.0% | |
| ACAGATGGGTGAGATAGAAG+AGG | + | chr4_3:4159672-4159691 | Msa0625170:intron | 45.0% | |
| !! | TTCAGGTACTGGTTGTCTGA+CGG | + | chr4_3:4159704-4159723 | Msa0625170:intron | 45.0% |
| TCCCCTATTGTCCCACAATT+GGG | + | chr4_3:4160269-4160288 | Msa0625170:intron | 45.0% | |
| ACCCAATTGTGGGACAATAG+GGG | - | chr4_3:4160273-4160292 | None:intergenic | 45.0% | |
| CACCCAATTGTGGGACAATA+GGG | - | chr4_3:4160274-4160293 | None:intergenic | 45.0% | |
| ACACCCAATTGTGGGACAAT+AGG | - | chr4_3:4160275-4160294 | None:intergenic | 45.0% | |
| !! | AAAAGCTTGAAGGGCACCAA+TGG | - | chr4_3:4160756-4160775 | None:intergenic | 45.0% |
| ! | GAGGAAGTACAATCCAGAAC+TGG | - | chr4_3:4160910-4160929 | None:intergenic | 45.0% |
| !! | GTATTTTGAGGGTGCAGAAG+AGG | + | chr4_3:4160939-4160958 | Msa0625170:intron | 45.0% |
| !! | ATTTTGAGGGTGCAGAAGAG+GGG | + | chr4_3:4160941-4160960 | Msa0625170:intron | 45.0% |
| CCCTGTATGTGGTGTAAATC+TGG | + | chr4_3:4161159-4161178 | Msa0625170:intron | 45.0% | |
| CCCAGATTTACACCACATAC+AGG | - | chr4_3:4161163-4161182 | None:intergenic | 45.0% | |
| GTAAATCTGGGTATGGCAGT+TGG | + | chr4_3:4161172-4161191 | Msa0625170:intron | 45.0% | |
| AAATCTGGGTATGGCAGTTG+GGG | + | chr4_3:4161174-4161193 | Msa0625170:intron | 45.0% | |
| AGGTTGCTTGAGTGGATAGT+AGG | - | chr4_3:4161436-4161455 | None:intergenic | 45.0% | |
| ATCGGCCAAACCATGTATCA+AGG | - | chr4_3:4161456-4161475 | None:intergenic | 45.0% | |
| ! | TTGATACATGGTTTGGCCGA+TGG | + | chr4_3:4161455-4161474 | Msa0625170:CDS | 45.0% |
| TGGATGTTCTCTTGGCTGAA+AGG | + | chr4_3:4161600-4161619 | Msa0625170:CDS | 45.0% | |
| AAGGCGAGTAGAAGAAGCTT+TGG | + | chr4_3:4161619-4161638 | Msa0625170:CDS | 45.0% | |
| ACGTTCTCCTTCATCAAGAG+CGG | - | chr4_3:4161645-4161664 | None:intergenic | 45.0% | |
| ATGCACGAAGTTCAGATCCA+CGG | - | chr4_3:4161796-4161815 | None:intergenic | 45.0% | |
| GCCCTTAAAAAACTTGGGGA+TGG | + | chr4_3:4161824-4161843 | Msa0625170:CDS | 45.0% | |
| ! | CCTCCATATGAGGTGTTTGA+CGG | - | chr4_3:4161920-4161939 | None:intergenic | 45.0% |
| ACAAGCTGCAAGTGACTCAT+TGG | + | chr4_3:4161985-4162004 | Msa0625170:CDS | 45.0% | |
| ! | TCTGGTGAAAAGGCATGCAT+TGG | + | chr4_3:4162084-4162103 | Msa0625170:CDS | 45.0% |
| !! | ACAAGAGAGTACTGCTGCTA+TGG | + | chr4_3:4162273-4162292 | Msa0625170:CDS | 45.0% |
| TATGGCTGCTGCTGATGATT+GGG | + | chr4_3:4162291-4162310 | Msa0625170:CDS | 45.0% | |
| TGCCCATCGCTTCAATTTGA+TGG | + | chr4_3:4162387-4162406 | Msa0625170:CDS | 45.0% | |
| ! | CAGGACTTCTTTGAGGATGT+AGG | + | chr4_3:4162926-4162945 | Msa0625170:intron | 45.0% |
| ACCTCTGCTTAGTATGCAGT+TGG | + | chr4_3:4162949-4162968 | Msa0625170:CDS | 45.0% | |
| CCTCTGCTTAGTATGCAGTT+GGG | + | chr4_3:4162950-4162969 | Msa0625170:CDS | 45.0% | |
| AGCACTACCAGAATCAATGG+AGG | + | chr4_3:4163033-4163052 | Msa0625170:CDS | 45.0% | |
| GGAGGAAGAAGAAAGCTTTG+AGG | + | chr4_3:4163051-4163070 | Msa0625170:CDS | 45.0% | |
| AATCTGCTGGGCTTCAGTTT+CGG | - | chr4_3:4163104-4163123 | None:intergenic | 45.0% | |
| GCTAGCTAATGCCTCATTAC+TGG | + | chr4_3:4163129-4163148 | Msa0625170:CDS | 45.0% | |
| ATAGGGATCTTGGTTTAGGG+AGG | - | chr4_3:4163191-4163210 | None:intergenic | 45.0% | |
| ACCGTAGAAGAACCACAGAA+AGG | + | chr4_3:4163221-4163240 | Msa0625170:CDS | 45.0% | |
| GCCTTTCTGTGGTTCTTCTA+CGG | - | chr4_3:4163225-4163244 | None:intergenic | 45.0% | |
| GGCAGAAAGGAAAAGTAGAG+AGG | - | chr4_3:4163603-4163622 | None:intergenic | 45.0% | |
| GAAGAAAAGAGCAGGCAGAA+AGG | - | chr4_3:4163616-4163635 | None:intergenic | 45.0% | |
| ! | GCCTGCTCTTTTCTTCTTGT+TGG | + | chr4_3:4163620-4163639 | Msa0625170:intron | 45.0% |
| CCCAACAAGAAGAAAAGAGC+AGG | - | chr4_3:4163624-4163643 | None:intergenic | 45.0% | |
| CTTGTTGGGAACTTCTCTGT+TGG | + | chr4_3:4163635-4163654 | Msa0625170:intron | 45.0% | |
| TGTTGGGAACTTCTCTGTTG+GGG | + | chr4_3:4163637-4163656 | Msa0625170:intron | 45.0% | |
| TGTTGGGGATATGTGTAACG+AGG | + | chr4_3:4163652-4163671 | Msa0625170:intron | 45.0% | |
| !! | GAAACTCTTACGGCATTGAC+TGG | + | chr4_3:4163908-4163927 | Msa0625170:intron | 45.0% |
| TGTTCCTCTTTGTCCACAGA+AGG | + | chr4_3:4164074-4164093 | Msa0625170:intron | 45.0% | |
| AGTTGTCTACCTAGGGACAT+GGG | - | chr4_3:4164277-4164296 | None:intergenic | 45.0% | |
| AAGTTGTCTACCTAGGGACA+TGG | - | chr4_3:4164278-4164297 | None:intergenic | 45.0% | |
| CAGCAGATATGTTTGTAGGG+AGG | + | chr4_3:4164630-4164649 | Msa0625170:CDS | 45.0% | |
| ATGATATTGAGGAAGGGCCA+AGG | + | chr4_3:4164732-4164751 | Msa0625170:CDS | 45.0% | |
| TGTAGACCAAGAGGACCTAA+AGG | - | chr4_3:4164758-4164777 | None:intergenic | 45.0% | |
| CATACCTGTTGTAGACCAAG+AGG | - | chr4_3:4164767-4164786 | None:intergenic | 45.0% | |
| AACTTGGATAGGTCAGTGCT+TGG | - | chr4_3:4164950-4164969 | None:intergenic | 45.0% | |
| TCCAAGTTCCTAACAACCAG+TGG | + | chr4_3:4164962-4164981 | Msa0625170:intron | 45.0% | |
| ! | ACCACTGGTTGTTAGGAACT+TGG | - | chr4_3:4164966-4164985 | None:intergenic | 45.0% |
| AGGAAGTGACCGGCTATTAT+CGG | - | chr4_3:4165539-4165558 | None:intergenic | 45.0% | |
| !!! | GCCGGTCACTTCCTTTTTTT+TGG | + | chr4_3:4165545-4165564 | Msa0625170:intron | 45.0% |
| TTGAGGATGGTGCAGTAGAA+AGG | - | chr4_3:4165643-4165662 | None:intergenic | 45.0% | |
| GTAGTCTTTGTGAAGGAGTC+AGG | - | chr4_3:4165752-4165771 | None:intergenic | 45.0% | |
| GATGTATAGCGACAGTGACA+GGG | - | chr4_3:4166156-4166175 | None:intergenic | 45.0% | |
| AGATGTATAGCGACAGTGAC+AGG | - | chr4_3:4166157-4166176 | None:intergenic | 45.0% | |
| TGATATACGGGTCGGATATG+GGG | - | chr4_3:4166239-4166258 | None:intergenic | 45.0% | |
| GTGATATACGGGTCGGATAT+GGG | - | chr4_3:4166240-4166259 | None:intergenic | 45.0% | |
| AGTGATATACGGGTCGGATA+TGG | - | chr4_3:4166241-4166260 | None:intergenic | 45.0% | |
| CTATACCCATGTGAAGGTGA+AGG | + | chr4_3:4166305-4166324 | Msa0625170:intron | 45.0% | |
| CTTCACCTTCACCTTCACAT+GGG | - | chr4_3:4166313-4166332 | None:intergenic | 45.0% | |
| TCTTCACCTTCACCTTCACA+TGG | - | chr4_3:4166314-4166333 | None:intergenic | 45.0% | |
| TTCTTTGAACCGGTTGTAGG+AGG | + | chr4_3:4166474-4166493 | Msa0625170:intron | 45.0% | |
| AAGGACGGCCAGAATCTAAA+AGG | - | chr4_3:4166713-4166732 | None:intergenic | 45.0% | |
| AGCAATACATGCGGCTATGT+TGG | - | chr4_3:4166952-4166971 | None:intergenic | 45.0% | |
| ! | GTTGTGTGTTTTGCCTCCAA+CGG | + | chr4_3:4167126-4167145 | Msa0625170:CDS | 45.0% |
| ! | AGCATTTTCTGCAACAGGGA+TGG | + | chr4_3:4167209-4167228 | Msa0625170:CDS | 45.0% |
| GTGATCTGCCTGAAGATGAA+TGG | + | chr4_3:4167377-4167396 | Msa0625170:intron | 45.0% | |
| CTCTCCCCGTTTATTTCCTT+TGG | - | chr4_3:4167448-4167467 | None:intergenic | 45.0% | |
| ! | ATGATGTTTTTCTCCCCCCT+TGG | + | chr4_3:4167639-4167658 | Msa0625170:three_prime_UTR | 45.0% |
| !! | AAAATGAAAGGGGTGCCAAG+GGG | - | chr4_3:4167657-4167676 | None:intergenic | 45.0% |
| !! | CAAAAATGAAAGGGGTGCCA+AGG | - | chr4_3:4167659-4167678 | None:intergenic | 45.0% |
| !! | AATAAAAAGATAAATTTAAT+GGG | - | chr4_3:4166555-4166574 | None:intergenic | 5.0% |
| !! | AAATAAAAAGATAAATTTAA+TGG | - | chr4_3:4166556-4166575 | None:intergenic | 5.0% |
| !! | TAAATATTATAACAAATATA+AGG | - | chr4_3:4166833-4166852 | None:intergenic | 5.0% |
| !! | TAAATATTATAACAAATATA+AGG | - | chr4_3:4166833-4166852 | None:intergenic | 5.0% |
| CCGCCATAACAAGATCACGA+AGG | - | chr4_3:4157359-4157378 | None:intergenic | 50.0% | |
| CTGGGCCTGTTTGTTTGGAT+TGG | - | chr4_3:4158209-4158228 | None:intergenic | 50.0% | |
| TGACACTGGGCCTGTTTGTT+TGG | - | chr4_3:4158214-4158233 | None:intergenic | 50.0% | |
| CACGTGTGTTGGGGTTATGT+TGG | - | chr4_3:4158383-4158402 | None:intergenic | 50.0% | |
| TGCGACAACAAGATACAGGC+AGG | - | chr4_3:4158665-4158684 | None:intergenic | 50.0% | |
| CTTGAAAAGAGCTTCTGCCG+AGG | + | chr4_3:4159226-4159245 | Msa0625170:CDS | 50.0% | |
| CCAAGACTCACCCAACTAGT+GGG | + | chr4_3:4159485-4159504 | Msa0625170:intron | 50.0% | |
| GGTGAGATAGAAGAGGCAGT+GGG | + | chr4_3:4159679-4159698 | Msa0625170:intron | 50.0% | |
| GTGAGATAGAAGAGGCAGTG+GGG | + | chr4_3:4159680-4159699 | Msa0625170:intron | 50.0% | |
| CAATTGTGGGACAATAGGGG+AGG | - | chr4_3:4160270-4160289 | None:intergenic | 50.0% | |
| CTCCCCTATTGTCCCACAAT+TGG | + | chr4_3:4160268-4160287 | Msa0625170:intron | 50.0% | |
| CGCTACTACATATGTGCGCA+TGG | - | chr4_3:4160488-4160507 | None:intergenic | 50.0% | |
| TACAATCCAGAACTGGGCTG+TGG | - | chr4_3:4160903-4160922 | None:intergenic | 50.0% | |
| !! | TTTTGAGGGTGCAGAAGAGG+GGG | + | chr4_3:4160942-4160961 | Msa0625170:intron | 50.0% |
| AATCTGGGTATGGCAGTTGG+GGG | + | chr4_3:4161175-4161194 | Msa0625170:intron | 50.0% | |
| AGTTCAGATCCACGGGTAGA+AGG | - | chr4_3:4161788-4161807 | None:intergenic | 50.0% | |
| TGCACGAAGTTCAGATCCAC+GGG | - | chr4_3:4161795-4161814 | None:intergenic | 50.0% | |
| AGTAGCAAGCTGTGAGCATG+CGG | - | chr4_3:4161851-4161870 | None:intergenic | 50.0% | |
| ! | CATATGAGGTGTTTGACGGC+CGG | - | chr4_3:4161916-4161935 | None:intergenic | 50.0% |
| CCGTCAAACACCTCATATGG+AGG | + | chr4_3:4161917-4161936 | Msa0625170:CDS | 50.0% | |
| ! | TACTGCAGCTCTAGCACAAC+TGG | + | chr4_3:4161946-4161965 | Msa0625170:CDS | 50.0% |
| AGGAGGTTTAAGAGCTGCTG+CGG | + | chr4_3:4162123-4162142 | Msa0625170:CDS | 50.0% | |
| CTATGGCTGCTGCTGATGAT+TGG | + | chr4_3:4162290-4162309 | Msa0625170:CDS | 50.0% | |
| TCCTCCTAATGCTAATCGGC+AGG | + | chr4_3:4162324-4162343 | Msa0625170:CDS | 50.0% | |
| AACAGTGATACAGCAGCCGT+TGG | + | chr4_3:4162476-4162495 | Msa0625170:intron | 50.0% | |
| ACAGTGATACAGCAGCCGTT+GGG | + | chr4_3:4162477-4162496 | Msa0625170:intron | 50.0% | |
| CCCAACTGCATACTAAGCAG+AGG | - | chr4_3:4162953-4162972 | None:intergenic | 50.0% | |
| CTGCTTAGTATGCAGTTGGG+AGG | + | chr4_3:4162953-4162972 | Msa0625170:CDS | 50.0% | |
| AGCTAGCAGTGCAATCTGCT+GGG | - | chr4_3:4163116-4163135 | None:intergenic | 50.0% | |
| TAGCTAGCAGTGCAATCTGC+TGG | - | chr4_3:4163117-4163136 | None:intergenic | 50.0% | |
| GTTTAGGGAGGAGAGCTTCA+TGG | - | chr4_3:4163179-4163198 | None:intergenic | 50.0% | |
| GTCATCCTGAACAACGGGAA+TGG | + | chr4_3:4163251-4163270 | Msa0625170:CDS | 50.0% | |
| ATCCTGAACAACGGGAATGG+AGG | + | chr4_3:4163254-4163273 | Msa0625170:CDS | 50.0% | |
| CCAGGAGATAGATATGCACC+CGG | - | chr4_3:4164196-4164215 | None:intergenic | 50.0% | |
| !! | CATCTTAGTGGGTTCAGGCT+TGG | + | chr4_3:4164303-4164322 | Msa0625170:intron | 50.0% |
| AGGTCCTCTTGGTCTACAAC+AGG | + | chr4_3:4164760-4164779 | Msa0625170:CDS | 50.0% | |
| CTTAACCGCCACATGCTTAC+AGG | + | chr4_3:4166212-4166231 | Msa0625170:intron | 50.0% | |
| TATGGGGTCCTGTAAGCATG+TGG | - | chr4_3:4166223-4166242 | None:intergenic | 50.0% | |
| CGGTTCAGTGATATACGGGT+CGG | - | chr4_3:4166247-4166266 | None:intergenic | 50.0% | |
| ATGCGGCTATACCCATGTGA+AGG | + | chr4_3:4166299-4166318 | Msa0625170:intron | 50.0% | |
| ! | TGTGTTTTGCCTCCAACGGT+CGG | + | chr4_3:4167130-4167149 | Msa0625170:CDS | 50.0% |
| TGACAAATACCGACCGTTGG+AGG | - | chr4_3:4167142-4167161 | None:intergenic | 50.0% | |
| CCTTGACAAATACCGACCGT+TGG | - | chr4_3:4167145-4167164 | None:intergenic | 50.0% | |
| CCAACGGTCGGTATTTGTCA+AGG | + | chr4_3:4167142-4167161 | Msa0625170:CDS | 50.0% | |
| CAACAGGGATGGATCCGTAT+AGG | + | chr4_3:4167220-4167239 | Msa0625170:CDS | 50.0% | |
| GTGCAGAGACAGATGCAGTA+GGG | - | chr4_3:4167483-4167502 | None:intergenic | 50.0% | |
| TGTGCAGAGACAGATGCAGT+AGG | - | chr4_3:4167484-4167503 | None:intergenic | 50.0% | |
| !! | AAATGAAAGGGGTGCCAAGG+GGG | - | chr4_3:4167656-4167675 | None:intergenic | 50.0% |
| TTCACGGTCAAGAGCTACGG+CGG | + | chr4_3:4157398-4157417 | Msa0625170:CDS | 55.0% | |
| GACACTTCTGCGCATCTCCT+CGG | - | chr4_3:4159246-4159265 | None:intergenic | 55.0% | |
| TGAGTCTTGGCCGAACAGCA+AGG | - | chr4_3:4159475-4159494 | None:intergenic | 55.0% | |
| GCCAAGACTCACCCAACTAG+TGG | + | chr4_3:4159484-4159503 | Msa0625170:intron | 55.0% | |
| CCCACTAGTTGGGTGAGTCT+TGG | - | chr4_3:4159488-4159507 | None:intergenic | 55.0% | |
| GCACTAGGCTCCCACTAGTT+GGG | - | chr4_3:4159498-4159517 | None:intergenic | 55.0% | |
| TGCACTAGGCTCCCACTAGT+TGG | - | chr4_3:4159499-4159518 | None:intergenic | 55.0% | |
| GGGTGAGATAGAAGAGGCAG+TGG | + | chr4_3:4159678-4159697 | Msa0625170:intron | 55.0% | |
| AGAAGAGGCAGTGGGGTTTC+AGG | + | chr4_3:4159687-4159706 | Msa0625170:intron | 55.0% | |
| ATCTGGGTATGGCAGTTGGG+GGG | + | chr4_3:4161176-4161195 | Msa0625170:intron | 55.0% | |
| GCTTTGGCCGCTCTTGATGA+AGG | + | chr4_3:4161635-4161654 | Msa0625170:CDS | 55.0% | |
| CGGCCGTCAAACACCTCATA+TGG | + | chr4_3:4161914-4161933 | Msa0625170:CDS | 55.0% | |
| TTGGCTTCATCAGCAGCTGC+AGG | + | chr4_3:4162103-4162122 | Msa0625170:CDS | 55.0% | |
| ! | GCCTGCCGATTAGCATTAGG+AGG | - | chr4_3:4162328-4162347 | None:intergenic | 55.0% |
| CCTAATGCTAATCGGCAGGC+CGG | + | chr4_3:4162328-4162347 | Msa0625170:CDS | 55.0% | |
| !! | TTGGGAGGACAAGCTCTGGA+AGG | + | chr4_3:4162968-4162987 | Msa0625170:CDS | 55.0% |
| !! | TGGGAGGACAAGCTCTGGAA+GGG | + | chr4_3:4162969-4162988 | Msa0625170:CDS | 55.0% |
| CTCCTCCATTCCCGTTGTTC+AGG | - | chr4_3:4163259-4163278 | None:intergenic | 55.0% | |
| GAATGGAGGAGACGACTCGT+GGG | + | chr4_3:4163268-4163287 | Msa0625170:CDS | 55.0% | |
| GACTCGTGGGTTCAGTTGAC+AGG | + | chr4_3:4163281-4163300 | Msa0625170:CDS | 55.0% | |
| CCGGGTGCATATCTATCTCC+TGG | + | chr4_3:4164193-4164212 | Msa0625170:intron | 55.0% | |
| TGTCTACCTAGGGACATGGG+AGG | - | chr4_3:4164274-4164293 | None:intergenic | 55.0% | |
| CCAAGAGGACCTAAAGGCCT+TGG | - | chr4_3:4164752-4164771 | None:intergenic | 55.0% | |
| CCAAGGCCTTTAGGTCCTCT+TGG | + | chr4_3:4164749-4164768 | Msa0625170:CDS | 55.0% | |
| GTCAGGCGAGTTTGCCAGTT+TGG | - | chr4_3:4165735-4165754 | None:intergenic | 55.0% | |
| !! | AATGAAAGGGGTGCCAAGGG+GGG | - | chr4_3:4167655-4167674 | None:intergenic | 55.0% |
| ! | GGCAGTGGGGTTTCAGGTAC+TGG | + | chr4_3:4159693-4159712 | Msa0625170:intron | 60.0% |
| TCTGGGTATGGCAGTTGGGG+GGG | + | chr4_3:4161177-4161196 | Msa0625170:intron | 60.0% | |
| GCTTGTCAGCCTTCTACCCG+TGG | + | chr4_3:4161776-4161795 | Msa0625170:CDS | 60.0% | |
| GCTTCATCAGCAGCTGCAGG+AGG | + | chr4_3:4162106-4162125 | Msa0625170:CDS | 60.0% | |
| ! | CCGGCCTGCCGATTAGCATT+AGG | - | chr4_3:4162331-4162350 | None:intergenic | 60.0% |
| GCAGTTGGGAGGACAAGCTC+TGG | + | chr4_3:4162964-4162983 | Msa0625170:CDS | 60.0% | |
| GGAATGGAGGAGACGACTCG+TGG | + | chr4_3:4163267-4163286 | Msa0625170:CDS | 60.0% | |
| GAAGCTCCTCCCATGTCCCT+AGG | + | chr4_3:4164265-4164284 | Msa0625170:intron | 60.0% | |
| GAGGAAGGGCCAAGGCCTTT+AGG | + | chr4_3:4164740-4164759 | Msa0625170:CDS | 60.0% | |
| AGGGCGAGTTCGAAGACGTG+AGG | - | chr4_3:4166137-4166156 | None:intergenic | 60.0% | |
| GGGGTCCTGTAAGCATGTGG+CGG | - | chr4_3:4166220-4166239 | None:intergenic | 60.0% | |
| GCTCTGCCACAGCCCAGTTC+TGG | + | chr4_3:4160894-4160913 | Msa0625170:intron | 65.0% | |
| CTGGGTATGGCAGTTGGGGG+GGG | + | chr4_3:4161178-4161197 | Msa0625170:intron | 65.0% | |
| TGGGTATGGCAGTTGGGGGG+GGG | + | chr4_3:4161179-4161198 | Msa0625170:intron | 65.0% | |
| GAGAGCTTCATGGCTGCGCG+TGG | - | chr4_3:4163169-4163188 | None:intergenic | 65.0% | |
| GGGTATGGCAGTTGGGGGGG+GGG | + | chr4_3:4161180-4161199 | Msa0625170:intron | 70.0% | |
| GGTATGGCAGTTGGGGGGGG+GGG | + | chr4_3:4161181-4161200 | Msa0625170:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 4157352 | 4167822 | 4157352 | ID=Msa0625170;Name=Msa0625170 |
| chr4_3 | mRNA | 4157352 | 4167822 | 4157352 | ID=Msa0625170-mRNA-1;Parent=Msa0625170;Name=Msa0625170-mRNA-1;_AED=0.09;_eAED=0.09;_QI=20|1|1|1|1|1|7|282|764 |
| chr4_3 | exon | 4157352 | 4157530 | 4157352 | ID=Msa0625170-mRNA-1:exon:986;Parent=Msa0625170-mRNA-1 |
| chr4_3 | exon | 4159194 | 4159291 | 4159194 | ID=Msa0625170-mRNA-1:exon:987;Parent=Msa0625170-mRNA-1 |
| chr4_3 | exon | 4161382 | 4162414 | 4161382 | ID=Msa0625170-mRNA-1:exon:988;Parent=Msa0625170-mRNA-1 |
| chr4_3 | exon | 4162929 | 4163444 | 4162929 | ID=Msa0625170-mRNA-1:exon:989;Parent=Msa0625170-mRNA-1 |
| chr4_3 | exon | 4164593 | 4164781 | 4164593 | ID=Msa0625170-mRNA-1:exon:990;Parent=Msa0625170-mRNA-1 |
| chr4_3 | exon | 4167105 | 4167241 | 4167105 | ID=Msa0625170-mRNA-1:exon:991;Parent=Msa0625170-mRNA-1 |
| chr4_3 | exon | 4167378 | 4167822 | 4167378 | ID=Msa0625170-mRNA-1:exon:992;Parent=Msa0625170-mRNA-1 |
| chr4_3 | five_prime_UTR | 4157352 | 4157371 | 4157352 | ID=Msa0625170-mRNA-1:five_prime_utr;Parent=Msa0625170-mRNA-1 |
| chr4_3 | CDS | 4157372 | 4157530 | 4157372 | ID=Msa0625170-mRNA-1:cds;Parent=Msa0625170-mRNA-1 |
| chr4_3 | CDS | 4159194 | 4159291 | 4159194 | ID=Msa0625170-mRNA-1:cds;Parent=Msa0625170-mRNA-1 |
| chr4_3 | CDS | 4161382 | 4162414 | 4161382 | ID=Msa0625170-mRNA-1:cds;Parent=Msa0625170-mRNA-1 |
| chr4_3 | CDS | 4162929 | 4163444 | 4162929 | ID=Msa0625170-mRNA-1:cds;Parent=Msa0625170-mRNA-1 |
| chr4_3 | CDS | 4164593 | 4164781 | 4164593 | ID=Msa0625170-mRNA-1:cds;Parent=Msa0625170-mRNA-1 |
| chr4_3 | CDS | 4167105 | 4167241 | 4167105 | ID=Msa0625170-mRNA-1:cds;Parent=Msa0625170-mRNA-1 |
| chr4_3 | CDS | 4167378 | 4167540 | 4167378 | ID=Msa0625170-mRNA-1:cds;Parent=Msa0625170-mRNA-1 |
| chr4_3 | three_prime_UTR | 4167541 | 4167822 | 4167541 | ID=Msa0625170-mRNA-1:three_prime_utr;Parent=Msa0625170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
