AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0625210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625210 MtrunA17_Chr2g0287651 93.814 873 51 1 1 870 1 873 0.0 1651
Msa0625210 MtrunA17_Chr1g0203051 37.545 554 344 1 66 619 70 621 4.07e-135 417
Msa0625210 MtrunA17_Chr5g0448761 32.447 564 369 8 79 632 64 625 5.48e-98 323
Msa0625210 MtrunA17_Chr1g0202341 30.449 624 407 13 19 632 3 609 1.35e-96 317
Msa0625210 MtrunA17_Chr3g0082121 31.659 657 400 17 77 710 45 675 1.56e-91 304
Msa0625210 MtrunA17_Chr8g0363841 30.743 579 380 7 71 635 9 580 1.63e-90 300
Msa0625210 MtrunA17_Chr2g0324011 29.768 561 385 4 77 632 12 568 3.98e-86 286
Msa0625210 MtrunA17_Chr2g0296781 28.979 666 439 12 79 722 1 654 7.65e-85 286
Msa0625210 MtrunA17_Chr1g0207551 29.195 596 402 9 48 632 3 589 6.21e-81 278
Msa0625210 MtrunA17_Chr5g0441581 29.329 566 370 8 79 632 36 583 4.37e-79 270
Msa0625210 MtrunA17_Chr6g0477261 29.213 534 359 6 208 723 12 544 4.61e-76 261
Msa0625210 MtrunA17_Chr3g0080351 29.102 646 397 16 79 700 80 688 6.86e-75 262
Msa0625210 MtrunA17_Chr6g0458391 28.374 578 377 11 66 632 214 765 2.34e-71 250
Msa0625210 MtrunA17_Chr1g0198761 27.507 698 452 18 81 741 53 733 6.36e-70 246
Msa0625210 MtrunA17_Chr5g0440451 27.560 664 378 19 54 668 24 633 5.28e-69 246
Msa0625210 MtrunA17_Chr2g0329031 27.257 565 379 12 78 631 17 560 1.46e-68 242
Msa0625210 MtrunA17_Chr1g0203721 26.868 562 394 9 81 632 69 623 3.60e-67 241
Msa0625210 MtrunA17_Chr5g0448511 31.726 394 252 9 255 637 16 403 1.10e-64 227
Msa0625210 MtrunA17_Chr1g0196541 25.943 663 458 10 79 722 1 649 1.89e-64 230
Msa0625210 MtrunA17_Chr2g0287061 28.322 572 340 13 80 635 188 705 1.18e-63 229
Msa0625210 MtrunA17_Chr2g0276841 27.826 575 365 15 81 629 76 626 1.97e-60 218
Msa0625210 MtrunA17_Chr2g0291581 27.634 579 366 17 77 632 73 621 2.34e-60 218
Msa0625210 MtrunA17_Chr2g0294841 27.317 615 404 13 33 627 12 603 2.34e-59 216
Msa0625210 MtrunA17_Chr3g0118611 26.667 480 339 6 251 725 118 589 2.49e-56 207
Msa0625210 MtrunA17_Chr5g0431001 28.995 438 287 9 68 486 53 485 3.89e-55 199
Msa0625210 MtrunA17_Chr2g0291591 28.484 488 307 11 79 547 68 532 4.98e-55 200
Msa0625210 MtrunA17_Chr2g0290391 25.578 606 408 13 50 629 22 610 6.66e-55 202
Msa0625210 MtrunA17_Chr1g0164591 32.787 305 191 4 161 460 8 303 6.12e-51 182
Msa0625210 MtrunA17_Chr7g0258861 33.569 283 184 3 79 359 14 294 6.11e-45 164
Msa0625210 MtrunA17_Chr2g0308841 33.772 228 148 1 404 631 2 226 9.38e-42 154
Msa0625210 MtrunA17_Chr8g0389811 31.088 193 116 3 9 187 7 196 2.83e-19 87.4
Msa0625210 MtrunA17_Chr1g0171741 29.703 202 127 6 8 205 72 262 2.67e-17 82.8
Msa0625210 MtrunA17_Chr8g0340801 33.645 107 69 1 188 294 3 107 1.16e-16 76.6
Msa0625210 MtrunA17_Chr2g0331371 31.200 125 86 0 66 190 46 170 5.30e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625210 AT4G38180.1 32.244 673 428 10 12 670 16 674 1.69e-104 341
Msa0625210 AT4G15090.1 27.217 654 446 12 32 668 2 642 4.09e-83 285
Msa0625210 AT4G15090.5 27.217 654 446 12 32 668 2 642 4.09e-83 285
Msa0625210 AT4G15090.3 27.217 654 446 12 32 668 2 642 4.09e-83 285
Msa0625210 AT4G15090.2 27.217 654 446 12 32 668 2 642 4.09e-83 285
Msa0625210 AT4G15090.4 27.217 654 446 12 32 668 2 642 4.09e-83 285
Msa0625210 AT3G22170.2 27.946 662 412 15 34 669 29 651 9.85e-76 265
Msa0625210 AT3G22170.1 27.946 662 412 15 34 669 29 651 9.85e-76 265
Msa0625210 AT3G06250.2 28.296 622 381 14 72 681 187 755 2.83e-73 256
Msa0625210 AT3G06250.1 28.296 622 381 14 72 681 187 755 2.83e-73 256
Msa0625210 AT3G06250.3 28.296 622 381 14 72 681 187 755 2.83e-73 256
Msa0625210 AT5G18960.2 28.571 623 367 19 79 681 215 779 6.92e-69 244
Msa0625210 AT5G18960.1 28.571 623 367 19 79 681 215 779 6.92e-69 244
Msa0625210 AT1G76320.3 27.006 648 428 13 79 707 1 622 3.99e-68 239
Msa0625210 AT1G76320.1 27.006 648 428 13 79 707 1 622 7.46e-68 240
Msa0625210 AT1G76320.4 27.006 648 428 13 79 707 1 622 7.46e-68 240
Msa0625210 AT1G76320.2 27.006 648 428 13 79 707 1 622 1.02e-67 240
Msa0625210 AT1G80010.1 27.113 627 398 18 51 645 75 674 1.83e-60 219
Msa0625210 AT1G10240.2 27.174 644 399 17 47 651 14 626 2.03e-60 218
Msa0625210 AT1G10240.1 27.174 644 399 17 47 651 14 626 2.03e-60 218
Msa0625210 AT2G27110.2 26.923 572 371 14 73 634 47 581 6.65e-60 219
Msa0625210 AT2G27110.1 26.923 572 371 14 73 634 47 581 6.65e-60 219
Msa0625210 AT4G19990.3 27.778 576 351 15 80 632 26 559 2.50e-59 216
Msa0625210 AT4G19990.4 27.778 576 351 15 80 632 26 559 2.50e-59 216
Msa0625210 AT4G19990.5 27.778 576 351 15 80 632 26 559 3.46e-59 216
Msa0625210 AT4G19990.6 27.778 576 351 15 80 632 26 559 3.83e-59 216
Msa0625210 AT4G19990.2 27.778 576 351 15 80 632 26 559 3.83e-59 216
Msa0625210 AT4G19990.7 27.730 577 352 15 80 633 40 574 4.31e-59 216
Msa0625210 AT2G32250.2 24.383 648 423 12 42 681 3 591 7.79e-56 207
Msa0625210 AT2G32250.4 24.383 648 423 12 42 681 3 591 7.79e-56 207
Msa0625210 AT2G32250.5 24.383 648 423 12 42 681 3 591 8.08e-56 206
Msa0625210 AT2G32250.6 24.383 648 423 12 42 681 3 591 9.25e-56 207
Msa0625210 AT2G32250.1 24.383 648 423 12 42 681 3 591 9.25e-56 207
Msa0625210 AT2G32250.3 24.383 648 423 12 42 681 3 591 9.25e-56 207
Msa0625210 AT2G32250.7 24.795 609 393 11 79 681 1 550 1.39e-55 206
Msa0625210 AT2G32250.8 24.795 609 393 11 79 681 1 550 1.49e-55 206
Msa0625210 AT2G27110.3 30.479 397 252 8 251 634 51 436 1.64e-54 202
Msa0625210 AT4G19990.1 27.811 507 313 12 138 633 39 503 4.53e-54 200
Msa0625210 AT1G52520.1 26.667 585 392 13 79 646 89 653 9.02e-54 199
Msa0625210 AT5G28530.1 25.127 589 397 14 81 643 61 631 6.39e-51 191
Msa0625210 AT4G38170.1 28.278 389 264 7 252 632 18 399 1.25e-50 187
Msa0625210 AT5G28530.3 25.297 589 392 15 81 643 61 627 4.05e-50 188
Msa0625210 AT5G28530.2 25.297 589 392 15 81 643 61 627 4.05e-50 188
Msa0625210 AT5G28530.4 22.648 574 367 13 81 643 61 568 1.05e-35 144
Msa0625210 AT5G28530.5 22.822 574 362 14 81 643 61 564 3.32e-35 143

Find 174 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTCTTAAACTTGAATT+TGG 0.181995 4_3:-4212562 Msa0625210:CDS
TATAAAGAAAACACCATTTC+TGG 0.203193 4_3:-4211588 Msa0625210:CDS
ACCACCATGAAGTCCATAAT+TGG 0.210507 4_3:+4210120 None:intergenic
AAGATATCGATCTGAAATTT+TGG 0.211975 4_3:+4214696 None:intergenic
CATTCACAGACCATTATATT+TGG 0.215412 4_3:-4211809 Msa0625210:CDS
CAAGCAATTTACCCCAATTA+TGG 0.222640 4_3:-4210133 Msa0625210:CDS
GTTGCGTTCTTCTTCTTCTT+TGG 0.224742 4_3:+4210642 None:intergenic
TATTTACGTGATAAGTTCTT+TGG 0.228072 4_3:-4211422 Msa0625210:CDS
CCATCTGTTACCACTGCTTT+TGG 0.236832 4_3:+4211704 None:intergenic
GTCATGAATGTTGCTGGTTT+TGG 0.255328 4_3:-4210061 Msa0625210:CDS
GAAGAATGAAAAGACTGTTT+TGG 0.262348 4_3:-4211949 Msa0625210:CDS
CGGAGCAATTTGAGGAGTTT+TGG 0.270030 4_3:-4211529 Msa0625210:CDS
AATCAAAACCTGTCATATAA+TGG 0.273083 4_3:-4212161 Msa0625210:CDS
AGAAGTTAAAGATGAAATTA+TGG 0.274889 4_3:-4211165 Msa0625210:CDS
CTGTCATATAATGGGATATA+TGG 0.287437 4_3:-4212152 Msa0625210:CDS
AACTTCCTGTGTTGGGCTCT+TGG 0.288676 4_3:-4210089 Msa0625210:CDS
TAGGGTTGCAATTGAAGATT+TGG 0.310553 4_3:-4209807 Msa0625210:three_prime_UTR
CTTGTGCTAGCATTGCCATT+AGG 0.324197 4_3:+4210283 None:intergenic
GCCTTGCTTCGCAATTTGTT+CGG 0.326898 4_3:+4212347 None:intergenic
TAGCTAATTTAAGACTCAAT+AGG 0.330926 4_3:-4209982 Msa0625210:three_prime_UTR
TACCCCAATTATGGACTTCA+TGG 0.332590 4_3:-4210124 Msa0625210:CDS
CCTTGCTTCGCAATTTGTTC+GGG 0.333508 4_3:+4212348 None:intergenic
ATGATTGAACTTGCTCGATT+TGG 0.365589 4_3:-4210843 Msa0625210:CDS
CCATTAGGAAAGGTGATGTT+AGG 0.366141 4_3:-4212483 Msa0625210:CDS
ATCAAAACCTGTCATATAAT+GGG 0.369316 4_3:-4212160 Msa0625210:CDS
TGATCACATACCAGAATGTT+TGG 0.370163 4_3:-4210940 Msa0625210:CDS
GCATCCTACGTTTGCTCATA+TGG 0.373073 4_3:-4214951 Msa0625210:five_prime_UTR
TACTCAGTCTAAAAGTTATC+AGG 0.373452 4_3:-4210700 Msa0625210:CDS
CAAGCGTGCGCCACAGAGAA+AGG 0.379347 4_3:+4214669 None:intergenic
ATTTACGTGGGGTTACTTCA+TGG 0.380615 4_3:+4212260 None:intergenic
TCAGCTGTCTCCGGAATCTC+TGG 0.384192 4_3:+4210226 None:intergenic
GGTTGAACTACATTTGTAAC+TGG 0.389125 4_3:+4210199 None:intergenic
ACTTCAATATAATGAAGAAT+TGG 0.390431 4_3:-4210441 Msa0625210:CDS
GTAAAATTTCTGAAGCAGAT+AGG 0.391444 4_3:-4212213 Msa0625210:CDS
GATCTCTGCTGTGTAAATTC+TGG 0.392583 4_3:+4211193 None:intergenic
CCTAACATCACCTTTCCTAA+TGG 0.392597 4_3:+4212483 None:intergenic
GAGAAAGGGAGGAAGAAATC+TGG 0.397963 4_3:+4214720 None:intergenic
GCACAAGTCATGAATGTTGC+TGG 0.402938 4_3:-4210067 Msa0625210:CDS
TCATACCGCAAGGCATTGTT+TGG 0.406615 4_3:-4210580 Msa0625210:intron
CCACCATGAAGTCCATAATT+GGG 0.409599 4_3:+4210121 None:intergenic
ATACACAAATGCATTATGAT+TGG 0.412739 4_3:+4215003 None:intergenic
CAACGCAACACCAAATATAA+TGG 0.414453 4_3:+4211799 None:intergenic
CAGTTTGTGTGCAACAAGAA+TGG 0.415144 4_3:-4212430 Msa0625210:CDS
TATATTTGGTGTTGCGTTGT+TGG 0.419803 4_3:-4211795 Msa0625210:CDS
TTTCTAAACCCCTCCAGAAA+TGG 0.421587 4_3:+4211575 None:intergenic
GCCATCCTCCGTCCGCCACC+TGG 0.422550 4_3:-4214612 Msa0625210:five_prime_UTR
TGTACTTCAGTCGTTGTGTT+TGG 0.423350 4_3:-4209843 Msa0625210:three_prime_UTR
GAGACAAGAAGCACTTATCT+AGG 0.423504 4_3:-4212402 Msa0625210:CDS
AATCATCAACTTCCTGTGTT+GGG 0.424191 4_3:-4210096 Msa0625210:CDS
CGTGTCATAACCAAACATTC+TGG 0.425974 4_3:+4210930 None:intergenic
CGCATTCTTGTGTAAATGCC+AGG 0.430292 4_3:+4211619 None:intergenic
GGAACACCACAAAGACTGTT+TGG 0.430519 4_3:-4212782 Msa0625210:CDS
CATCTCATCGCTTATGTGCC+TGG 0.431687 4_3:-4211637 Msa0625210:CDS
TTCTGAACAGCGATTCCAAT+GGG 0.432579 4_3:-4210881 Msa0625210:CDS
TGACTTTAAATCAAAATTCA+CGG 0.435713 4_3:-4211261 Msa0625210:CDS
GTATTCTTCTTCACTGGAAT+CGG 0.437019 4_3:+4212756 None:intergenic
TTTGGGCTGATGGGAGTAGT+AGG 0.444063 4_3:-4211931 Msa0625210:CDS
ATCTGTGTATTCTTCTTCAC+TGG 0.444466 4_3:+4212750 None:intergenic
TAAATTGCTTGCATTTCCAT+TGG 0.446330 4_3:+4210145 None:intergenic
ATTTAACTTATGAAACTGAA+TGG 0.449490 4_3:-4209767 Msa0625210:three_prime_UTR
CCAGGTTGCAACACATTCAC+AGG 0.453864 4_3:+4210175 None:intergenic
CATAAGCGATGAGATGCATC+AGG 0.456050 4_3:+4211644 None:intergenic
AGCTAATTTAAGACTCAATA+GGG 0.458746 4_3:-4209981 Msa0625210:three_prime_UTR
GATACCATGGTTTATACATT+GGG 0.461449 4_3:-4211101 Msa0625210:CDS
TGAACTTGAAGGAAATGCTT+GGG 0.462518 4_3:-4211486 Msa0625210:CDS
GAATCATCAACTTCCTGTGT+TGG 0.463071 4_3:-4210097 Msa0625210:CDS
AATGAGGGAAGCTATTAAAC+AGG 0.464184 4_3:-4211672 Msa0625210:CDS
ATTCAGAAGAATGAACTTGA+AGG 0.466546 4_3:-4211497 Msa0625210:CDS
ATTAGCATCTATTTCCCCAT+TGG 0.467480 4_3:+4210866 None:intergenic
AGCACTTATCTAGGAATGAT+AGG 0.468246 4_3:-4212393 Msa0625210:CDS
AGTTTGTGTGCAACAAGAAT+GGG 0.470588 4_3:-4212429 Msa0625210:CDS
TAAAATTTCTGAAGCAGATA+GGG 0.473779 4_3:-4212212 Msa0625210:CDS
AAGAATTTCATCAGAGGCAA+TGG 0.477228 4_3:+4212576 None:intergenic
TTTGGATGTTTGATCACATA+GGG 0.478828 4_3:-4209825 Msa0625210:three_prime_UTR
ATGAACTTGAAGGAAATGCT+TGG 0.479360 4_3:-4211487 Msa0625210:CDS
TGGCGGACGGAGGATGGCGG+TGG 0.480597 4_3:+4214617 None:intergenic
GGGATATATGGTTGCTCAGA+AGG 0.480775 4_3:-4212140 Msa0625210:CDS
CACCTGGCTCTCCAAGCCTC+AGG 0.482248 4_3:-4214596 Msa0625210:intron
AACCTGAGGCTTGGAGAGCC+AGG 0.492195 4_3:+4214594 None:intergenic
GTTATCAACATCACCATGGC+AGG 0.493355 4_3:-4209713 None:intergenic
CATATATCCCATTATATGAC+AGG 0.494595 4_3:+4212153 None:intergenic
CCTTTGCTCTTCACAGTGAC+CGG 0.495645 4_3:+4210669 None:intergenic
GGATACCATGGTTTATACAT+TGG 0.504775 4_3:-4211102 Msa0625210:CDS
AAGTTATCAGGTAGGTGATC+CGG 0.508654 4_3:-4210688 Msa0625210:CDS
GCCAGGTGGCGGACGGAGGA+TGG 0.509337 4_3:+4214611 None:intergenic
ACTGGCAAATCAGCTGTCTC+CGG 0.514020 4_3:+4210217 None:intergenic
TTGGGAAAATATCGTGAGAA+AGG 0.514905 4_3:-4211083 Msa0625210:CDS
AGGCTTGGAGAGCCAGGTGG+CGG 0.516697 4_3:+4214600 None:intergenic
GATGCTGAAGATGATGTTGA+TGG 0.520081 4_3:-4212691 Msa0625210:CDS
CAATATAAGTAACACTCAAA+CGG 0.521512 4_3:+4209742 None:intergenic
CGTTGGACAAAGAACGCAAA+AGG 0.525733 4_3:-4210909 Msa0625210:CDS
TTGGAGAGCCAGGTGGCGGA+CGG 0.527044 4_3:+4214604 None:intergenic
CGGAGTCCAAACAGTCTTTG+TGG 0.529107 4_3:+4212776 None:intergenic
ATTTCCATTGGAAATTTACC+AGG 0.529349 4_3:+4210157 None:intergenic
TATCGTTATGGAAAATGCAA+AGG 0.529410 4_3:-4212511 Msa0625210:CDS
AGAAAACACCATTTCTGGAG+GGG 0.531592 4_3:-4211583 Msa0625210:CDS
CAAGCAAAAGAAATGTAAAG+AGG 0.532177 4_3:-4210260 Msa0625210:CDS
CAAAACTCCTCAAATTGCTC+CGG 0.533339 4_3:+4211530 None:intergenic
GCGATGCATTAGCAAGTGAC+AGG 0.533703 4_3:-4212615 Msa0625210:CDS
CTTGATGCTCTTCAATCACA+TGG 0.535182 4_3:-4212184 Msa0625210:CDS
TGATTGAAGAGCATCAAGTT+GGG 0.536427 4_3:+4212189 None:intergenic
AAGGGTGGATATACTGATGT+AGG 0.538008 4_3:-4212121 Msa0625210:CDS
GTGATTGAAGAGCATCAAGT+TGG 0.540889 4_3:+4212188 None:intergenic
CTGCTCAAACTGATTGAAGC+TGG 0.542661 4_3:-4210006 Msa0625210:exon
CCTGTGAATGTGTTGCAACC+TGG 0.546145 4_3:-4210175 Msa0625210:CDS
GAATACGATGTCAACAATGA+TGG 0.547496 4_3:-4211971 Msa0625210:CDS
ATTTGGTGTTGCGTTGTTGG+AGG 0.548289 4_3:-4211792 Msa0625210:CDS
GATGGTGAAGATGCATGAAT+TGG 0.549510 4_3:+4214768 None:intergenic
AAAGATGAAATTATGGATGC+TGG 0.553017 4_3:-4211158 Msa0625210:CDS
CCCGAACAAATTGCGAAGCA+AGG 0.553648 4_3:-4212348 Msa0625210:CDS
AAGAAAACACCATTTCTGGA+GGG 0.560073 4_3:-4211584 Msa0625210:CDS
TAGAAAACGAACCTGAGGCT+TGG 0.561009 4_3:+4214585 None:intergenic
CCAAAAGCAGTGGTAACAGA+TGG 0.564129 4_3:-4211704 Msa0625210:CDS
GTTTGGATGTTTGATCACAT+AGG 0.564529 4_3:-4209826 Msa0625210:three_prime_UTR
GAGAGCCAGGTGGCGGACGG+AGG 0.565502 4_3:+4214607 None:intergenic
AAGCGTGCGCCACAGAGAAA+GGG 0.566713 4_3:+4214670 None:intergenic
GCAACCTGGTAAATTTCCAA+TGG 0.569433 4_3:-4210161 Msa0625210:CDS
CAAATATAATGGTCTGTGAA+TGG 0.569710 4_3:+4211810 None:intergenic
AGATGGAGATGGATCAATGA+GGG 0.572748 4_3:-4211687 Msa0625210:CDS
AAACAATCGAGTCATATAAG+TGG 0.576897 4_3:-4211766 Msa0625210:CDS
GATGTTAGGCGCAATAGTAG+TGG 0.581865 4_3:-4212469 Msa0625210:CDS
AAGACATATTCTAGAGCCAA+AGG 0.582373 4_3:-4211353 Msa0625210:CDS
AGGTGGCGGACGGAGGATGG+CGG 0.582676 4_3:+4214614 None:intergenic
AGCATATAACATTGGATCGG+TGG 0.585153 4_3:+4211994 None:intergenic
GGATATATGGTTGCTCAGAA+GGG 0.589834 4_3:-4212139 Msa0625210:CDS
CGTGCGCCACAGAGAAAGGG+AGG 0.594110 4_3:+4214673 None:intergenic
AACAATCGAGTCATATAAGT+GGG 0.595371 4_3:-4211765 Msa0625210:CDS
GATAGCTTCACATTGAGATG+TGG 0.595390 4_3:+4211388 None:intergenic
TTTCTGAACAGCGATTCCAA+TGG 0.598192 4_3:-4210882 Msa0625210:CDS
GCAAGTGTGTAAATTTACGT+GGG 0.600179 4_3:+4212248 None:intergenic
TGATGAATCAGTTCAACAAG+AGG 0.603374 4_3:-4212647 Msa0625210:CDS
AAAGAAAACACCATTTCTGG+AGG 0.609498 4_3:-4211585 Msa0625210:CDS
CCGGTCACTGTGAAGAGCAA+AGG 0.613504 4_3:-4210669 Msa0625210:CDS
TATATGGTTGCTCAGAAGGG+TGG 0.613989 4_3:-4212136 Msa0625210:CDS
TTCAGCATATAACATTGGAT+CGG 0.614583 4_3:+4211991 None:intergenic
TATCTATAAGTTTAATACGA+TGG 0.619728 4_3:+4214794 None:intergenic
TGCTGGTGCAATACGTCTCG+AGG 0.619998 4_3:-4211141 Msa0625210:CDS
AAGTTTAAGAATTTCATCAG+AGG 0.626746 4_3:+4212570 None:intergenic
ATGCGTAGTAAAATTTGATG+TGG 0.627496 4_3:+4214970 None:intergenic
CACCATGAAGTCCATAATTG+GGG 0.627752 4_3:+4210122 None:intergenic
CCCAATTATGGACTTCATGG+TGG 0.629190 4_3:-4210121 Msa0625210:CDS
GTGCATTACAAAGCTAAACA+AGG 0.632644 4_3:-4212319 Msa0625210:CDS
TCGTATTCAGCATATAACAT+TGG 0.632685 4_3:+4211986 None:intergenic
CAGTCTAAAAGTTATCAGGT+AGG 0.641408 4_3:-4210696 Msa0625210:CDS
TGCAAGTGTGTAAATTTACG+TGG 0.643723 4_3:+4212247 None:intergenic
ATGCGCGATGTCATTAAAGA+CGG 0.646118 4_3:-4212058 Msa0625210:CDS
AAAGTACAAGTCATACCGCA+AGG 0.649575 4_3:-4210590 Msa0625210:CDS
AAGTAAGTTCCCAAAAGCAG+TGG 0.654507 4_3:-4211714 Msa0625210:CDS
GAACTTATCACGTAAATATG+CGG 0.655600 4_3:+4211427 None:intergenic
TGTAGACTATTCGAGTCACG+TGG 0.658455 4_3:-4211008 Msa0625210:CDS
TATCTTCCTCCCTTTCTCTG+TGG 0.658547 4_3:-4214679 Msa0625210:five_prime_UTR
TTGTGCCAAGAGCCCAACAC+AGG 0.660751 4_3:+4210084 None:intergenic
TGCATTACAAAGCTAAACAA+GGG 0.661066 4_3:-4212318 Msa0625210:CDS
AATGTTTGGTTATGACACGT+TGG 0.662725 4_3:-4210926 Msa0625210:CDS
GCAGTGGTAACAGATGGAGA+TGG 0.663593 4_3:-4211698 Msa0625210:CDS
ATATGCGAACAAGTCACTGT+GGG 0.664385 4_3:-4211453 Msa0625210:CDS
GATGAATCAGTTCAACAAGA+GGG 0.669122 4_3:-4212646 Msa0625210:CDS
CGCAGGTGAGTTGACAACAC+AGG 0.673245 4_3:+4211236 None:intergenic
CATCACTCTCAATCAAACGC+AGG 0.673784 4_3:+4211219 None:intergenic
GGTTGCAACACATTCACAGG+AGG 0.686316 4_3:+4210178 None:intergenic
CAAGTGTGTAAATTTACGTG+GGG 0.688606 4_3:+4212249 None:intergenic
CACCCAGAAAATATACACAA+CGG 0.691486 4_3:+4211839 None:intergenic
ATGAAGCTGAATCTGTGCGA+TGG 0.692675 4_3:+4214750 None:intergenic
CTGAGGCTTGGAGAGCCAGG+TGG 0.693769 4_3:+4214597 None:intergenic
ATATAATGGTCTGTGAATGG+TGG 0.703942 4_3:+4211813 None:intergenic
GTAGTGGAATAATTACAATG+AGG 0.704741 4_3:-4212453 Msa0625210:CDS
CAGATGGAGATGGATCAATG+AGG 0.711130 4_3:-4211688 Msa0625210:CDS
ATAAGCGATGAGATGCATCA+GGG 0.712304 4_3:+4211645 None:intergenic
TCTGAACAGCGATTCCAATG+GGG 0.714485 4_3:-4210880 Msa0625210:CDS
CATATGCGAACAAGTCACTG+TGG 0.716941 4_3:-4211454 Msa0625210:CDS
ATATGTTATCAACATCACCA+TGG 0.721154 4_3:-4209717 Msa0625210:three_prime_UTR
AATTACCAAACAATGCCTTG+CGG 0.726793 4_3:+4210575 None:intergenic
GTAGACTATTCGAGTCACGT+GGG 0.777031 4_3:-4211007 Msa0625210:CDS
TGCACCATATGAGCAAACGT+AGG 0.794394 4_3:+4214947 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAATCAATTAAAAT+GGG + chr4_3:4210684-4210703 None:intergenic 10.0%
!! AAAATCAAAATCAATTAAAA+TGG + chr4_3:4210685-4210704 None:intergenic 10.0%
!!! GTTTAATTTTGATTTAATCA+AGG + chr4_3:4209827-4209846 None:intergenic 15.0%
!!! AATCTCCTTTTTTTTAATTA+GGG - chr4_3:4210184-4210203 Msa0625210:CDS 15.0%
!! AAAAACCCTAATTAAAAAAA+AGG + chr4_3:4210192-4210211 None:intergenic 15.0%
!!! TTGTTATTATTATTAGTAAC+AGG - chr4_3:4211146-4211165 Msa0625210:CDS 15.0%
!!! TGAGATTATATTGATTTTAT+AGG + chr4_3:4211325-4211344 None:intergenic 15.0%
!!! GAGATTTTAAAAGATTATTT+TGG + chr4_3:4211381-4211400 None:intergenic 15.0%
!!! AATAATATATTGGCTATTTT+AGG - chr4_3:4211905-4211924 Msa0625210:CDS 15.0%
!!! ATAATATATTGGCTATTTTA+GGG - chr4_3:4211906-4211925 Msa0625210:CDS 15.0%
!!! TATGAATTTTATTATCGTTA+TGG - chr4_3:4212195-4212214 Msa0625210:CDS 15.0%
!! ACATTATAATTCTTAATTCA+TGG + chr4_3:4214199-4214218 None:intergenic 15.0%
!!! CAATTTTTTTTTTTTTTTGC+AGG - chr4_3:4214238-4214257 Msa0625210:intron 15.0%
!! TGCAATATGTAAAAATATAG+TGG + chr4_3:4209797-4209816 None:intergenic 20.0%
!! TATCTATAAGTTTAATACGA+TGG + chr4_3:4209927-4209946 None:intergenic 20.0%
!!! GAATCTCCTTTTTTTTAATT+AGG - chr4_3:4210183-4210202 Msa0625210:CDS 20.0%
!!! TAATTAGGGTTTTTTGTTTT+TGG - chr4_3:4210198-4210217 Msa0625210:CDS 20.0%
!! TGAATCTAATAGTGTTTAAT+TGG - chr4_3:4210232-4210251 Msa0625210:CDS 20.0%
!! GGATTATGAGTAATATAATA+GGG - chr4_3:4210274-4210293 Msa0625210:CDS 20.0%
!!! AATCACAAAATCCTAAATTT+TGG + chr4_3:4210331-4210350 None:intergenic 20.0%
!! CACAAAATTAGTAACAATTT+CGG + chr4_3:4210384-4210403 None:intergenic 20.0%
!!! AAATTGTTACTAATTTTGTG+TGG - chr4_3:4210384-4210403 Msa0625210:intron 20.0%
!! AATTGTAAAAGCAACAAAAA+AGG + chr4_3:4210519-4210538 None:intergenic 20.0%
!!! TATTTTTTGAAAAATCACGA+TGG - chr4_3:4210766-4210785 Msa0625210:CDS 20.0%
!! GAATAATAACAAGAAGAAAA+GGG + chr4_3:4210945-4210964 None:intergenic 20.0%
!! TGAATAATAACAAGAAGAAA+AGG + chr4_3:4210946-4210965 None:intergenic 20.0%
!! AAAGATTTCAATAGACTTTA+TGG + chr4_3:4211222-4211241 None:intergenic 20.0%
!!! TTAAATGACTTTTTACAATC+AGG + chr4_3:4211286-4211305 None:intergenic 20.0%
!!! TTTTGGTTGCAATAATATAT+TGG - chr4_3:4211895-4211914 Msa0625210:CDS 20.0%
!! GAAATTCTTAAACTTGAATT+TGG - chr4_3:4212156-4212175 Msa0625210:CDS 20.0%
!!! TTTCCATACATTCTAAAAAA+CGG + chr4_3:4212986-4213005 Msa0625220:CDS 20.0%
!!! AAATTCAAAAATTTTGCCTT+TGG + chr4_3:4213384-4213403 None:intergenic 20.0%
!!! ATTTATGCATAATTTTGAAC+AGG - chr4_3:4213400-4213419 Msa0625210:intron 20.0%
!! TGACTTTAAATCAAAATTCA+CGG - chr4_3:4213457-4213476 Msa0625210:intron 20.0%
!! AGAAGTTAAAGATGAAATTA+TGG - chr4_3:4213553-4213572 Msa0625210:intron 20.0%
!!! AAAAAAGAATGGTGTTTTTA+GGG - chr4_3:4213940-4213959 Msa0625210:intron 20.0%
!! ACTTCAATATAATGAAGAAT+TGG - chr4_3:4214277-4214296 Msa0625210:intron 20.0%
!! ATCTAATATTGTTGCATAAA+AGG + chr4_3:4214362-4214381 None:intergenic 20.0%
!! AAAAAGAAAAGAAAACCTAA+TGG - chr4_3:4214420-4214439 Msa0625210:intron 20.0%
!!! ATATCAGAGAACTTTTTTTT+TGG - chr4_3:4214824-4214843 Msa0625210:five_prime_UTR 20.0%
!!! ATTTAACTTATGAAACTGAA+TGG - chr4_3:4214951-4214970 Msa0625210:five_prime_UTR 20.0%
!!! AAGATATCGATCTGAAATTT+TGG + chr4_3:4210025-4210044 None:intergenic 25.0%
! TGGTTGATTGATTATGAAAT+TGG - chr4_3:4210252-4210271 Msa0625210:CDS 25.0%
! GGTTGATTGATTATGAAATT+GGG - chr4_3:4210253-4210272 Msa0625210:CDS 25.0%
! GGGATTATGAGTAATATAAT+AGG - chr4_3:4210273-4210292 Msa0625210:CDS 25.0%
!! TTTTGATGTGTCCAAAATTT+AGG - chr4_3:4210317-4210336 Msa0625210:intron 25.0%
! AAAAATAATCTCCAATTGGA+TGG + chr4_3:4210356-4210375 None:intergenic 25.0%
! TATATTTATTCACTTCCGAT+CGG + chr4_3:4210410-4210429 None:intergenic 25.0%
!! GACAAAAAAGTAATGTCTTT+TGG + chr4_3:4210446-4210465 None:intergenic 25.0%
! ACTTAAGAGAATCTCTTAAA+AGG - chr4_3:4210834-4210853 Msa0625210:CDS 25.0%
! AGAACAAAACAAGAATAACA+GGG + chr4_3:4210907-4210926 None:intergenic 25.0%
! AAGAACAAAACAAGAATAAC+AGG + chr4_3:4210908-4210927 None:intergenic 25.0%
! AAAGAATGATGTATTGAACA+AGG + chr4_3:4210990-4211009 None:intergenic 25.0%
!! TTTTGAGCTCAAGATTTTAA+TGG + chr4_3:4211262-4211281 None:intergenic 25.0%
! TTTCAAGAATGTAATCTAAG+GGG + chr4_3:4211418-4211437 None:intergenic 25.0%
! GTTTCAAGAATGTAATCTAA+GGG + chr4_3:4211419-4211438 None:intergenic 25.0%
! AGTTTCAAGAATGTAATCTA+AGG + chr4_3:4211420-4211439 None:intergenic 25.0%
!! GTTTCTTCATATTTCTAAAG+AGG + chr4_3:4211785-4211804 None:intergenic 25.0%
!!! GTTTTTGTTGTTATCTAAGT+TGG - chr4_3:4211862-4211881 Msa0625210:CDS 25.0%
! AAGTTTAAGAATTTCATCAG+AGG + chr4_3:4212151-4212170 None:intergenic 25.0%
!!! TAAAATTTCTGAAGCAGATA+GGG - chr4_3:4212506-4212525 Msa0625210:CDS 25.0%
! AATCAAAACCTGTCATATAA+TGG - chr4_3:4212557-4212576 Msa0625210:CDS 25.0%
! ATCAAAACCTGTCATATAAT+GGG - chr4_3:4212558-4212577 Msa0625210:CDS 25.0%
!! AAGAATGAAAAGACTGTTTT+GGG - chr4_3:4212770-4212789 Msa0625210:CDS 25.0%
!!! AGGTCTGATTATTTTTGTTT+TGG - chr4_3:4212807-4212826 Msa0625210:intron 25.0%
! TATAAAGAAAACACCATTTC+TGG - chr4_3:4213130-4213149 Msa0625210:intron 25.0%
!! AATGTACTCAAATTTTACAC+CGG - chr4_3:4213169-4213188 Msa0625210:intron 25.0%
! TATTTACGTGATAAGTTCTT+TGG - chr4_3:4213296-4213315 Msa0625210:intron 25.0%
!! CATAATTTTGAACAGGTTTT+GGG - chr4_3:4213407-4213426 Msa0625210:intron 25.0%
!!! AAAAACACCATTCTTTTTTG+AGG + chr4_3:4213939-4213958 None:intergenic 25.0%
!! CAAAAAAGAATGGTGTTTTT+AGG - chr4_3:4213939-4213958 Msa0625210:intron 25.0%
!! ACAAATATACCTTCTCTTTT+TGG + chr4_3:4214331-4214350 None:intergenic 25.0%
!! TAGCTAATTTAAGACTCAAT+AGG - chr4_3:4214736-4214755 Msa0625210:five_prime_UTR 25.0%
!! AGCTAATTTAAGACTCAATA+GGG - chr4_3:4214737-4214756 Msa0625210:five_prime_UTR 25.0%
! CAATATAAGTAACACTCAAA+CGG + chr4_3:4214979-4214998 None:intergenic 25.0%
ATGCGTAGTAAAATTTGATG+TGG + chr4_3:4209751-4209770 None:intergenic 30.0%
!! TCTGAAATTTTGGAGAGAAA+GGG + chr4_3:4210015-4210034 None:intergenic 30.0%
!! ATCTGAAATTTTGGAGAGAA+AGG + chr4_3:4210016-4210035 None:intergenic 30.0%
TTTGTGATTATCCATCCAAT+TGG - chr4_3:4210342-4210361 Msa0625210:intron 30.0%
CCACAAAAATAATCTCCAAT+TGG + chr4_3:4210360-4210379 None:intergenic 30.0%
!!! CCAATTGGAGATTATTTTTG+TGG - chr4_3:4210357-4210376 Msa0625210:intron 30.0%
ATAAACAGAAAGCTACAGTT+CGG + chr4_3:4210479-4210498 None:intergenic 30.0%
!! ATTATAGAACTTGCTGCTTA+TGG + chr4_3:4210572-4210591 None:intergenic 30.0%
AATTAAAATGGGCAATGCAA+GGG + chr4_3:4210673-4210692 None:intergenic 30.0%
ATGTATGTTTGGTATCATTG+TGG + chr4_3:4210812-4210831 None:intergenic 30.0%
CTCTTAAGTGTATGTATGTT+TGG + chr4_3:4210823-4210842 None:intergenic 30.0%
TAAGAGAATCTCTTAAAAGG+AGG - chr4_3:4210837-4210856 Msa0625210:CDS 30.0%
AAGAGAATCTCTTAAAAGGA+GGG - chr4_3:4210838-4210857 Msa0625210:CDS 30.0%
TTGAACAAGGAAGAATAACA+GGG + chr4_3:4210977-4210996 None:intergenic 30.0%
ATTGAACAAGGAAGAATAAC+AGG + chr4_3:4210978-4210997 None:intergenic 30.0%
ATGGACTTATAAGATTTGAG+AGG + chr4_3:4211203-4211222 None:intergenic 30.0%
!!! CAAAGTCTTTTAAAATCTGC+AGG - chr4_3:4211345-4211364 Msa0625210:CDS 30.0%
TTCAAGAATGTAATCTAAGG+GGG + chr4_3:4211417-4211436 None:intergenic 30.0%
TAAGAGTAGTCTAGTCTAAT+CGG + chr4_3:4211479-4211498 None:intergenic 30.0%
ACTTACATAGACATAGACAT+AGG - chr4_3:4211536-4211555 Msa0625210:CDS 30.0%
!! GGTTGTTTTCTATGATTTCA+TGG + chr4_3:4211658-4211677 None:intergenic 30.0%
! TTCATATTTCTAAAGAGGAG+AGG + chr4_3:4211780-4211799 None:intergenic 30.0%
!! TTATCTAAGTTGGTCAAAGT+TGG - chr4_3:4211872-4211891 Msa0625210:CDS 30.0%
TATCGTTATGGAAAATGCAA+AGG - chr4_3:4212207-4212226 Msa0625210:CDS 30.0%
! AATGCAAAGGTTTTTCCATT+AGG - chr4_3:4212220-4212239 Msa0625210:CDS 30.0%
! AAAGGTTTTTCCATTAGGAA+AGG - chr4_3:4212225-4212244 Msa0625210:CDS 30.0%
! GTAGTGGAATAATTACAATG+AGG - chr4_3:4212265-4212284 Msa0625210:CDS 30.0%
TGCATTACAAAGCTAAACAA+GGG - chr4_3:4212400-4212419 Msa0625210:CDS 30.0%
! CAGAAATTTTACGATACAGT+GGG + chr4_3:4212497-4212516 None:intergenic 30.0%
! TCAGAAATTTTACGATACAG+TGG + chr4_3:4212498-4212517 None:intergenic 30.0%
!! GTAAAATTTCTGAAGCAGAT+AGG - chr4_3:4212505-4212524 Msa0625210:CDS 30.0%
CATATATCCCATTATATGAC+AGG + chr4_3:4212568-4212587 None:intergenic 30.0%
! CTGTCATATAATGGGATATA+TGG - chr4_3:4212566-4212585 Msa0625210:CDS 30.0%
TTCAGCATATAACATTGGAT+CGG + chr4_3:4212730-4212749 None:intergenic 30.0%
TCGTATTCAGCATATAACAT+TGG + chr4_3:4212735-4212754 None:intergenic 30.0%
! GAAGAATGAAAAGACTGTTT+TGG - chr4_3:4212769-4212788 Msa0625210:CDS 30.0%
! TATCCGTTGTGTATATTTTC+TGG - chr4_3:4212876-4212895 Msa0625210:intron 30.0%
! ATCCGTTGTGTATATTTTCT+GGG - chr4_3:4212877-4212896 Msa0625210:intron 30.0%
CAAATATAATGGTCTGTGAA+TGG + chr4_3:4212911-4212930 None:intergenic 30.0%
CATTCACAGACCATTATATT+TGG - chr4_3:4212909-4212928 Msa0625210:intron 30.0%
AAACAATCGAGTCATATAAG+TGG - chr4_3:4212952-4212971 Msa0625210:intron 30.0%
AACAATCGAGTCATATAAGT+GGG - chr4_3:4212953-4212972 Msa0625210:intron 30.0%
!!! GAACCGTTTTTTAGAATGTA+TGG - chr4_3:4212980-4212999 Msa0625210:intron 30.0%
ATTCAGAAGAATGAACTTGA+AGG - chr4_3:4213221-4213240 Msa0625210:intron 30.0%
GAACTTATCACGTAAATATG+CGG + chr4_3:4213294-4213313 None:intergenic 30.0%
! GCATAATTTTGAACAGGTTT+TGG - chr4_3:4213406-4213425 Msa0625210:intron 30.0%
AAAGATGAAATTATGGATGC+TGG - chr4_3:4213560-4213579 Msa0625210:intron 30.0%
GATACCATGGTTTATACATT+GGG - chr4_3:4213617-4213636 Msa0625210:intron 30.0%
! TTTTCCCAATGTATAAACCA+TGG + chr4_3:4213624-4213643 None:intergenic 30.0%
ACAAAAAAGACATGACAACA+TGG + chr4_3:4213740-4213759 None:intergenic 30.0%
!!! TCATGTCTTTTTTGTGATGA+AGG - chr4_3:4213745-4213764 Msa0625210:intron 30.0%
AAAGAAGCCTCAAAAAAGAA+TGG - chr4_3:4213929-4213948 Msa0625210:intron 30.0%
TACTCAGTCTAAAAGTTATC+AGG - chr4_3:4214018-4214037 Msa0625210:intron 30.0%
CAAGCAAAAGAAATGTAAAG+AGG - chr4_3:4214458-4214477 Msa0625210:intron 30.0%
AACAAAAATTCCAGAGATTC+CGG - chr4_3:4214482-4214501 Msa0625210:intron 30.0%
ATTTCCATTGGAAATTTACC+AGG + chr4_3:4214564-4214583 None:intergenic 30.0%
TAAATTGCTTGCATTTCCAT+TGG + chr4_3:4214576-4214595 None:intergenic 30.0%
TTTGGATGTTTGATCACATA+GGG - chr4_3:4214893-4214912 Msa0625210:five_prime_UTR 30.0%
ATATGTTATCAACATCACCA+TGG - chr4_3:4215001-4215020 Msa0625210:five_prime_UTR 30.0%
ACACATCAAAACCCTAACAA+TGG + chr4_3:4210308-4210327 None:intergenic 35.0%
CAATTAAAATGGGCAATGCA+AGG + chr4_3:4210674-4210693 None:intergenic 35.0%
AGAGAATCTCTTAAAAGGAG+GGG - chr4_3:4210839-4210858 Msa0625210:CDS 35.0%
CAAAACAAGAATAACAGGGA+AGG + chr4_3:4210903-4210922 None:intergenic 35.0%
! TCTTAATGCCAACCTCATTT+TGG - chr4_3:4211494-4211513 Msa0625210:CDS 35.0%
! CTTAATGCCAACCTCATTTT+GGG - chr4_3:4211495-4211514 Msa0625210:CDS 35.0%
ATCTCAAATGTCCCAAAATG+AGG + chr4_3:4211509-4211528 None:intergenic 35.0%
ACATAGACATAGACATAGGA+AGG - chr4_3:4211540-4211559 Msa0625210:CDS 35.0%
CATAGACATAGACATAGGAA+GGG - chr4_3:4211541-4211560 Msa0625210:CDS 35.0%
ATAGACATAGACATAGGAAG+GGG - chr4_3:4211542-4211561 Msa0625210:CDS 35.0%
GGATTAAACATTTCCAAGAG+AGG - chr4_3:4211572-4211591 Msa0625210:CDS 35.0%
TAAACATTTCCAAGAGAGGA+TGG - chr4_3:4211576-4211595 Msa0625210:CDS 35.0%
AAACATTTCCAAGAGAGGAT+GGG - chr4_3:4211577-4211596 Msa0625210:CDS 35.0%
GAGTGATTCATTTGTGATTG+AGG - chr4_3:4211599-4211618 Msa0625210:CDS 35.0%
TGATTCATTTGTGATTGAGG+AGG - chr4_3:4211602-4211621 Msa0625210:CDS 35.0%
TGCTAAAAATGGAGAAGAGA+CGG + chr4_3:4211754-4211773 None:intergenic 35.0%
! ATATTTCTAAAGAGGAGAGG+TGG + chr4_3:4211777-4211796 None:intergenic 35.0%
!! AAGTTGGTCAAAGTTGGTTT+TGG - chr4_3:4211878-4211897 Msa0625210:CDS 35.0%
GTATTCTTCTTCACTGGAAT+CGG + chr4_3:4211965-4211984 None:intergenic 35.0%
ATCTGTGTATTCTTCTTCAC+TGG + chr4_3:4211971-4211990 None:intergenic 35.0%
TGATGAATCAGTTCAACAAG+AGG - chr4_3:4212071-4212090 Msa0625210:CDS 35.0%
GATGAATCAGTTCAACAAGA+GGG - chr4_3:4212072-4212091 Msa0625210:CDS 35.0%
AAGAATTTCATCAGAGGCAA+TGG + chr4_3:4212145-4212164 None:intergenic 35.0%
AGTTTGTGTGCAACAAGAAT+GGG - chr4_3:4212289-4212308 Msa0625210:CDS 35.0%
AGCACTTATCTAGGAATGAT+AGG - chr4_3:4212325-4212344 Msa0625210:CDS 35.0%
GTGCATTACAAAGCTAAACA+AGG - chr4_3:4212399-4212418 Msa0625210:CDS 35.0%
!!! TGTAGTGTCTAGTTTTGTAG+AGG - chr4_3:4212428-4212447 Msa0625210:CDS 35.0%
!!! GTAGTGTCTAGTTTTGTAGA+GGG - chr4_3:4212429-4212448 Msa0625210:CDS 35.0%
!!! TAGTGTCTAGTTTTGTAGAG+GGG - chr4_3:4212430-4212449 Msa0625210:CDS 35.0%
CAAGTGTGTAAATTTACGTG+GGG + chr4_3:4212472-4212491 None:intergenic 35.0%
GCAAGTGTGTAAATTTACGT+GGG + chr4_3:4212473-4212492 None:intergenic 35.0%
TGCAAGTGTGTAAATTTACG+TGG + chr4_3:4212474-4212493 None:intergenic 35.0%
!! TGATTGAAGAGCATCAAGTT+GGG + chr4_3:4212532-4212551 None:intergenic 35.0%
GAATACGATGTCAACAATGA+TGG - chr4_3:4212747-4212766 Msa0625210:CDS 35.0%
!!! TTTTTGTTTTGGCGACGTTT+TGG - chr4_3:4212818-4212837 Msa0625210:intron 35.0%
CACCCAGAAAATATACACAA+CGG + chr4_3:4212882-4212901 None:intergenic 35.0%
ATATAATGGTCTGTGAATGG+TGG + chr4_3:4212908-4212927 None:intergenic 35.0%
CAACGCAACACCAAATATAA+TGG + chr4_3:4212922-4212941 None:intergenic 35.0%
!! TATATTTGGTGTTGCGTTGT+TGG - chr4_3:4212923-4212942 Msa0625210:intron 35.0%
AATGAGGGAAGCTATTAAAC+AGG - chr4_3:4213046-4213065 Msa0625210:intron 35.0%
! AAAGAAAACACCATTTCTGG+AGG - chr4_3:4213133-4213152 Msa0625210:intron 35.0%
! AAGAAAACACCATTTCTGGA+GGG - chr4_3:4213134-4213153 Msa0625210:intron 35.0%
ATGAACTTGAAGGAAATGCT+TGG - chr4_3:4213231-4213250 Msa0625210:intron 35.0%
TGAACTTGAAGGAAATGCTT+GGG - chr4_3:4213232-4213251 Msa0625210:intron 35.0%
!! AAGACATATTCTAGAGCCAA+AGG - chr4_3:4213365-4213384 Msa0625210:intron 35.0%
!!! AATTTTGAACAGGTTTTGGG+AGG - chr4_3:4213410-4213429 Msa0625210:intron 35.0%
GGATACCATGGTTTATACAT+TGG - chr4_3:4213616-4213635 Msa0625210:intron 35.0%
TTGGGAAAATATCGTGAGAA+AGG - chr4_3:4213635-4213654 Msa0625210:intron 35.0%
!!! CTTTTTTGTGATGAAGGAAG+AGG - chr4_3:4213751-4213770 Msa0625210:intron 35.0%
TGATCACATACCAGAATGTT+TGG - chr4_3:4213778-4213797 Msa0625210:intron 35.0%
AATGTTTGGTTATGACACGT+TGG - chr4_3:4213792-4213811 Msa0625210:intron 35.0%
ATTAGCATCTATTTCCCCAT+TGG + chr4_3:4213855-4213874 None:intergenic 35.0%
! ATGATTGAACTTGCTCGATT+TGG - chr4_3:4213875-4213894 Msa0625210:intron 35.0%
!!! TGGTGTTTTTAGGGACATAA+TGG - chr4_3:4213949-4213968 Msa0625210:intron 35.0%
CAGTCTAAAAGTTATCAGGT+AGG - chr4_3:4214022-4214041 Msa0625210:intron 35.0%
AATTACCAAACAATGCCTTG+CGG + chr4_3:4214146-4214165 None:intergenic 35.0%
TTCTTTACGCCAAAAAGAGA+AGG - chr4_3:4214319-4214338 Msa0625210:intron 35.0%
GGTTGAACTACATTTGTAAC+TGG + chr4_3:4214522-4214541 None:intergenic 35.0%
CAAGCAATTTACCCCAATTA+TGG - chr4_3:4214585-4214604 Msa0625210:intron 35.0%
AATCATCAACTTCCTGTGTT+GGG - chr4_3:4214622-4214641 Msa0625210:five_prime_UTR 35.0%
GTTTGGATGTTTGATCACAT+AGG - chr4_3:4214892-4214911 Msa0625210:five_prime_UTR 35.0%
TAGGGTTGCAATTGAAGATT+TGG - chr4_3:4214911-4214930 Msa0625210:five_prime_UTR 35.0%
GATGGTGAAGATGCATGAAT+TGG + chr4_3:4209953-4209972 None:intergenic 40.0%
!! GAAATTTTGGAGAGAAAGGG+AGG + chr4_3:4210012-4210031 None:intergenic 40.0%
AGTGTTAGAAAACGAACCTG+AGG + chr4_3:4210141-4210160 None:intergenic 40.0%
AGGGTTGTGAAACCATTGTT+AGG - chr4_3:4210293-4210312 Msa0625210:CDS 40.0%
GGGTTGTGAAACCATTGTTA+GGG - chr4_3:4210294-4210313 Msa0625210:CDS 40.0%
! ACTAATTTTGTGTGGCCGAT+CGG - chr4_3:4210392-4210411 Msa0625210:intron 40.0%
! TCTGCAGCATGTACTCTTTT+AGG - chr4_3:4210636-4210655 Msa0625210:CDS 40.0%
CAGACGTTATGCTAGAATCA+CGG - chr4_3:4210706-4210725 Msa0625210:CDS 40.0%
ATTGTGGTGTGTCACAATCA+TGG + chr4_3:4210796-4210815 None:intergenic 40.0%
! GAAGAAAAGGGTATGAGTGT+GGG + chr4_3:4210933-4210952 None:intergenic 40.0%
! AGAAGAAAAGGGTATGAGTG+TGG + chr4_3:4210934-4210953 None:intergenic 40.0%
ACAAGGAAGAATAACAGGGA+GGG + chr4_3:4210973-4210992 None:intergenic 40.0%
AACAAGGAAGAATAACAGGG+AGG + chr4_3:4210974-4210993 None:intergenic 40.0%
TTCGACAATGAGAAGCAACA+AGG + chr4_3:4211024-4211043 None:intergenic 40.0%
CAAATGTCCCAAAATGAGGT+TGG + chr4_3:4211505-4211524 None:intergenic 40.0%
TTCATTTGTGATTGAGGAGG+AGG - chr4_3:4211605-4211624 Msa0625210:CDS 40.0%
! CTCAGCTTCAAGTTCAAAAG+TGG + chr4_3:4211679-4211698 None:intergenic 40.0%
!!! TGGCTATTTTAGGGTTGTCA+TGG - chr4_3:4211915-4211934 Msa0625210:CDS 40.0%
GATGCTGAAGATGATGTTGA+TGG - chr4_3:4212027-4212046 Msa0625210:CDS 40.0%
CCTAACATCACCTTTCCTAA+TGG + chr4_3:4212238-4212257 None:intergenic 40.0%
CCATTAGGAAAGGTGATGTT+AGG - chr4_3:4212235-4212254 Msa0625210:CDS 40.0%
CAGTTTGTGTGCAACAAGAA+TGG - chr4_3:4212288-4212307 Msa0625210:CDS 40.0%
!! GAGACAAGAAGCACTTATCT+AGG - chr4_3:4212316-4212335 Msa0625210:CDS 40.0%
ATTTACGTGGGGTTACTTCA+TGG + chr4_3:4212461-4212480 None:intergenic 40.0%
!! GTGATTGAAGAGCATCAAGT+TGG + chr4_3:4212533-4212552 None:intergenic 40.0%
CTTGATGCTCTTCAATCACA+TGG - chr4_3:4212534-4212553 Msa0625210:CDS 40.0%
GGATATATGGTTGCTCAGAA+GGG - chr4_3:4212579-4212598 Msa0625210:CDS 40.0%
AAGGGTGGATATACTGATGT+AGG - chr4_3:4212597-4212616 Msa0625210:CDS 40.0%
ATGCGCGATGTCATTAAAGA+CGG - chr4_3:4212660-4212679 Msa0625210:CDS 40.0%
AGCATATAACATTGGATCGG+TGG + chr4_3:4212727-4212746 None:intergenic 40.0%
!! AAAAGACTGTTTTGGGCTGA+TGG - chr4_3:4212777-4212796 Msa0625210:CDS 40.0%
!! AAAGACTGTTTTGGGCTGAT+GGG - chr4_3:4212778-4212797 Msa0625210:CDS 40.0%
AAGTAAGTTCCCAAAAGCAG+TGG - chr4_3:4213004-4213023 Msa0625210:intron 40.0%
!! CATCTGTTACCACTGCTTTT+GGG + chr4_3:4213016-4213035 Msa0625220:CDS 40.0%
AGATGGAGATGGATCAATGA+GGG - chr4_3:4213031-4213050 Msa0625210:intron 40.0%
ATAAGCGATGAGATGCATCA+GGG + chr4_3:4213076-4213095 Msa0625220:CDS 40.0%
! AGAAAACACCATTTCTGGAG+GGG - chr4_3:4213135-4213154 Msa0625210:intron 40.0%
TTTCTAAACCCCTCCAGAAA+TGG + chr4_3:4213146-4213165 Msa0625220:CDS 40.0%
! TTTTACACCGGAGCAATTTG+AGG - chr4_3:4213181-4213200 Msa0625210:intron 40.0%
CAAAACTCCTCAAATTGCTC+CGG + chr4_3:4213191-4213210 None:intergenic 40.0%
ATATGCGAACAAGTCACTGT+GGG - chr4_3:4213265-4213284 Msa0625210:intron 40.0%
GATAGCTTCACATTGAGATG+TGG + chr4_3:4213333-4213352 None:intergenic 40.0%
GATCTCTGCTGTGTAAATTC+TGG + chr4_3:4213528-4213547 None:intergenic 40.0%
TCTCGAGGACAAAAAATGTG+TGG - chr4_3:4213592-4213611 Msa0625210:intron 40.0%
CTCGAGGACAAAAAATGTGT+GGG - chr4_3:4213593-4213612 Msa0625210:intron 40.0%
TCGAGGACAAAAAATGTGTG+GGG - chr4_3:4213594-4213613 Msa0625210:intron 40.0%
CGTGTCATAACCAAACATTC+TGG + chr4_3:4213791-4213810 None:intergenic 40.0%
TTTCTGAACAGCGATTCCAA+TGG - chr4_3:4213836-4213855 Msa0625210:intron 40.0%
TTCTGAACAGCGATTCCAAT+GGG - chr4_3:4213837-4213856 Msa0625210:intron 40.0%
AAGTTATCAGGTAGGTGATC+CGG - chr4_3:4214030-4214049 Msa0625210:intron 40.0%
GTTGCGTTCTTCTTCTTCTT+TGG + chr4_3:4214079-4214098 None:intergenic 40.0%
AAAGTACAAGTCATACCGCA+AGG - chr4_3:4214128-4214147 Msa0625210:intron 40.0%
GCAACCTGGTAAATTTCCAA+TGG - chr4_3:4214557-4214576 Msa0625210:intron 40.0%
TACCCCAATTATGGACTTCA+TGG - chr4_3:4214594-4214613 Msa0625210:intron 40.0%
CACCATGAAGTCCATAATTG+GGG + chr4_3:4214599-4214618 None:intergenic 40.0%
CCACCATGAAGTCCATAATT+GGG + chr4_3:4214600-4214619 None:intergenic 40.0%
ACCACCATGAAGTCCATAAT+TGG + chr4_3:4214601-4214620 None:intergenic 40.0%
GAATCATCAACTTCCTGTGT+TGG - chr4_3:4214621-4214640 Msa0625210:five_prime_UTR 40.0%
!!! GTCATGAATGTTGCTGGTTT+TGG - chr4_3:4214657-4214676 Msa0625210:five_prime_UTR 40.0%
TGTACTTCAGTCGTTGTGTT+TGG - chr4_3:4214875-4214894 Msa0625210:five_prime_UTR 40.0%
GCATCCTACGTTTGCTCATA+TGG - chr4_3:4209767-4209786 Msa0625210:three_prime_UTR 45.0%
TGCACCATATGAGCAAACGT+AGG + chr4_3:4209774-4209793 None:intergenic 45.0%
ATGAAGCTGAATCTGTGCGA+TGG + chr4_3:4209971-4209990 None:intergenic 45.0%
GAGAAAGGGAGGAAGAAATC+TGG + chr4_3:4210001-4210020 None:intergenic 45.0%
TATCTTCCTCCCTTTCTCTG+TGG - chr4_3:4210039-4210058 Msa0625210:CDS 45.0%
TAGAAAACGAACCTGAGGCT+TGG + chr4_3:4210136-4210155 None:intergenic 45.0%
ACATAGACATAGGAAGGGGA+GGG - chr4_3:4211546-4211565 Msa0625210:CDS 45.0%
AATGGAGAAGAGACGGTGAA+AGG + chr4_3:4211747-4211766 None:intergenic 45.0%
! AGGAGAGGTGGTGCTAAAAA+TGG + chr4_3:4211765-4211784 None:intergenic 45.0%
GGAACACCACAAAGACTGTT+TGG - chr4_3:4211936-4211955 Msa0625210:CDS 45.0%
GATGTTAGGCGCAATAGTAG+TGG - chr4_3:4212249-4212268 Msa0625210:CDS 45.0%
! CCTTGCTTCGCAATTTGTTC+GGG + chr4_3:4212373-4212392 None:intergenic 45.0%
! GCCTTGCTTCGCAATTTGTT+CGG + chr4_3:4212374-4212393 None:intergenic 45.0%
GGGATATATGGTTGCTCAGA+AGG - chr4_3:4212578-4212597 Msa0625210:CDS 45.0%
TATATGGTTGCTCAGAAGGG+TGG - chr4_3:4212582-4212601 Msa0625210:CDS 45.0%
!! ATTTGGTGTTGCGTTGTTGG+AGG - chr4_3:4212926-4212945 Msa0625210:intron 45.0%
! CCATCTGTTACCACTGCTTT+TGG + chr4_3:4213017-4213036 Msa0625220:CDS 45.0%
CCAAAAGCAGTGGTAACAGA+TGG - chr4_3:4213014-4213033 Msa0625210:intron 45.0%
CAGATGGAGATGGATCAATG+AGG - chr4_3:4213030-4213049 Msa0625210:intron 45.0%
CATAAGCGATGAGATGCATC+AGG + chr4_3:4213077-4213096 Msa0625220:CDS 45.0%
CGCATTCTTGTGTAAATGCC+AGG + chr4_3:4213102-4213121 Msa0625220:CDS 45.0%
! CGGAGCAATTTGAGGAGTTT+TGG - chr4_3:4213189-4213208 Msa0625210:intron 45.0%
CATATGCGAACAAGTCACTG+TGG - chr4_3:4213264-4213283 Msa0625210:intron 45.0%
CATCACTCTCAATCAAACGC+AGG + chr4_3:4213502-4213521 None:intergenic 45.0%
CGAGGACAAAAAATGTGTGG+GGG - chr4_3:4213595-4213614 Msa0625210:intron 45.0%
AAAATGTGTGGGGGATACCA+TGG - chr4_3:4213604-4213623 Msa0625210:intron 45.0%
TGTAGACTATTCGAGTCACG+TGG - chr4_3:4213710-4213729 Msa0625210:intron 45.0%
GTAGACTATTCGAGTCACGT+GGG - chr4_3:4213711-4213730 Msa0625210:intron 45.0%
CGTTGGACAAAGAACGCAAA+AGG - chr4_3:4213809-4213828 Msa0625210:intron 45.0%
TCTGAACAGCGATTCCAATG+GGG - chr4_3:4213838-4213857 Msa0625210:intron 45.0%
!! TCATACCGCAAGGCATTGTT+TGG - chr4_3:4214138-4214157 Msa0625210:intron 45.0%
CTTGTGCTAGCATTGCCATT+AGG + chr4_3:4214438-4214457 None:intergenic 45.0%
CCCAATTATGGACTTCATGG+TGG - chr4_3:4214597-4214616 Msa0625210:five_prime_UTR 45.0%
GCACAAGTCATGAATGTTGC+TGG - chr4_3:4214651-4214670 Msa0625210:five_prime_UTR 45.0%
CTGCTCAAACTGATTGAAGC+TGG - chr4_3:4214712-4214731 Msa0625210:five_prime_UTR 45.0%
GACATAGACATAGGAAGGGG+AGG - chr4_3:4211545-4211564 Msa0625210:CDS 50.0%
CATAGACATAGGAAGGGGAG+GGG - chr4_3:4211547-4211566 Msa0625210:CDS 50.0%
ATAGACATAGGAAGGGGAGG+GGG - chr4_3:4211548-4211567 Msa0625210:CDS 50.0%
GAATCACTCCCATCCTCTCT+TGG + chr4_3:4211588-4211607 None:intergenic 50.0%
AAAGGAGTGAAGCCAAGCAG+TGG + chr4_3:4211729-4211748 None:intergenic 50.0%
CGGAGTCCAAACAGTCTTTG+TGG + chr4_3:4211945-4211964 None:intergenic 50.0%
GCGATGCATTAGCAAGTGAC+AGG - chr4_3:4212103-4212122 Msa0625210:CDS 50.0%
CCCGAACAAATTGCGAAGCA+AGG - chr4_3:4212370-4212389 Msa0625210:CDS 50.0%
TTTGGGCTGATGGGAGTAGT+AGG - chr4_3:4212787-4212806 Msa0625210:CDS 50.0%
GCAGTGGTAACAGATGGAGA+TGG - chr4_3:4213020-4213039 Msa0625210:intron 50.0%
CATCTCATCGCTTATGTGCC+TGG - chr4_3:4213081-4213100 Msa0625210:intron 50.0%
CCTTTGCTCTTCACAGTGAC+CGG + chr4_3:4214052-4214071 None:intergenic 50.0%
ACTGGCAAATCAGCTGTCTC+CGG + chr4_3:4214504-4214523 None:intergenic 50.0%
GGTTGCAACACATTCACAGG+AGG + chr4_3:4214543-4214562 None:intergenic 50.0%
CCAGGTTGCAACACATTCAC+AGG + chr4_3:4214546-4214565 None:intergenic 50.0%
CCTGTGAATGTGTTGCAACC+TGG - chr4_3:4214543-4214562 Msa0625210:intron 50.0%
AACTTCCTGTGTTGGGCTCT+TGG - chr4_3:4214629-4214648 Msa0625210:five_prime_UTR 50.0%
AAGCGTGCGCCACAGAGAAA+GGG + chr4_3:4210051-4210070 None:intergenic 55.0%
CAGTGGCAGCAACTTTGGTG+AGG + chr4_3:4211712-4211731 None:intergenic 55.0%
CCAAGCAGTGGCAGCAACTT+TGG + chr4_3:4211717-4211736 None:intergenic 55.0%
CCAAAGTTGCTGCCACTGCT+TGG - chr4_3:4211714-4211733 Msa0625210:CDS 55.0%
! CGCAGGTGAGTTGACAACAC+AGG + chr4_3:4213485-4213504 None:intergenic 55.0%
TGCTGGTGCAATACGTCTCG+AGG - chr4_3:4213577-4213596 Msa0625210:intron 55.0%
CCGGTCACTGTGAAGAGCAA+AGG - chr4_3:4214049-4214068 Msa0625210:intron 55.0%
TCAGCTGTCTCCGGAATCTC+TGG + chr4_3:4214495-4214514 None:intergenic 55.0%
TTGTGCCAAGAGCCCAACAC+AGG + chr4_3:4214637-4214656 None:intergenic 55.0%
CAAGCGTGCGCCACAGAGAA+AGG + chr4_3:4210052-4210071 None:intergenic 60.0%
AACCTGAGGCTTGGAGAGCC+AGG + chr4_3:4210127-4210146 None:intergenic 60.0%
CGTGCGCCACAGAGAAAGGG+AGG + chr4_3:4210048-4210067 None:intergenic 65.0%
!! TTGGAGAGCCAGGTGGCGGA+CGG + chr4_3:4210117-4210136 None:intergenic 65.0%
AGGCTTGGAGAGCCAGGTGG+CGG + chr4_3:4210121-4210140 None:intergenic 65.0%
CTGAGGCTTGGAGAGCCAGG+TGG + chr4_3:4210124-4210143 None:intergenic 65.0%
! CACCTGGCTCTCCAAGCCTC+AGG - chr4_3:4210122-4210141 Msa0625210:CDS 65.0%
GACATAGGAAGGGGAGGGGG+TGG - chr4_3:4211551-4211570 Msa0625210:CDS 65.0%
!! AGGTGGCGGACGGAGGATGG+CGG + chr4_3:4210107-4210126 None:intergenic 70.0%
! TGGCGGACGGAGGATGGCGG+TGG + chr4_3:4210104-4210123 None:intergenic 75.0%
GCCATCCTCCGTCCGCCACC+TGG - chr4_3:4210106-4210125 Msa0625210:CDS 75.0%
!! GCCAGGTGGCGGACGGAGGA+TGG + chr4_3:4210110-4210129 None:intergenic 75.0%
!! GAGAGCCAGGTGGCGGACGG+AGG + chr4_3:4210114-4210133 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 4209716 4215024 4209716 ID=Msa0625210;Name=Msa0625210
chr4_3 mRNA 4209716 4215024 4209716 ID=Msa0625210-mRNA-1;Parent=Msa0625210;Name=Msa0625210-mRNA-1;_AED=0.02;_eAED=0.02;_QI=435|1|1|1|0.66|0.5|4|296|871
chr4_3 exon 4209716 4210320 4209716 ID=Msa0625210-mRNA-1:exon:1059;Parent=Msa0625210-mRNA-1
chr4_3 exon 4210400 4210480 4210400 ID=Msa0625210-mRNA-1:exon:1058;Parent=Msa0625210-mRNA-1
chr4_3 exon 4210581 4212813 4210581 ID=Msa0625210-mRNA-1:exon:1057;Parent=Msa0625210-mRNA-1
chr4_3 exon 4214597 4215024 4214597 ID=Msa0625210-mRNA-1:exon:1056;Parent=Msa0625210-mRNA-1
chr4_3 five_prime_UTR 4214597 4215024 4214597 ID=Msa0625210-mRNA-1:five_prime_utr;Parent=Msa0625210-mRNA-1
chr4_3 five_prime_UTR 4212807 4212813 4212807 ID=Msa0625210-mRNA-1:five_prime_utr;Parent=Msa0625210-mRNA-1
chr4_3 CDS 4210581 4212806 4210581 ID=Msa0625210-mRNA-1:cds;Parent=Msa0625210-mRNA-1
chr4_3 CDS 4210400 4210480 4210400 ID=Msa0625210-mRNA-1:cds;Parent=Msa0625210-mRNA-1
chr4_3 CDS 4210012 4210320 4210012 ID=Msa0625210-mRNA-1:cds;Parent=Msa0625210-mRNA-1
chr4_3 three_prime_UTR 4209716 4210011 4209716 ID=Msa0625210-mRNA-1:three_prime_utr;Parent=Msa0625210-mRNA-1
Gene Sequence

>Msa0625210

ATGGAACACCACAAAGACTGTTTGGACTCCGATTCCAGTGAAGAAGAATACACAGATGATTTAATAGATGATGAAGAACATCATAGTTCGTCTGATGCTGAAGATGATGTTGATGGTAATGCTGATGATGATGTTCATGATGAATCAGTTCAACAAGAGGGTTCAATCAGCGATGCATTAGCAAGTGACAGGTTTGTGAATGTAAATTCCATTGCCTCTGATGAAATTCTTAAACTTGAATTTGGTACTGTTGATGAAGCGTATGAATTTTATTATCGTTATGGAAAATGCAAAGGTTTTTCCATTAGGAAAGGTGATGTTAGGCGCAATAGTAGTGGAATAATTACAATGAGGCAGTTTGTGTGCAACAAGAATGGGTTAAGAGACAAGAAGCACTTATCTAGGAATGATAGGAAAAGAGATCATAGACGTATCACCCGAACAAATTGCGAAGCAAGGCTTCGTGTGCATTACAAAGCTAAACAAGGGAGATATGTAGTGTCTAGTTTTGTAGAGGGGCATAACCATGAAGTAACCCCACGTAAATTTACACACTTGCACCCACTGTATCGTAAAATTTCTGAAGCAGATAGGGCCCAACTTGATGCTCTTCAATCACATGGAATCAAAACCTGTCATATAATGGGATATATGGTTGCTCAGAAGGGTGGATATACTGATGTAGGTTTTACTAAGAAAGATCTGTATAACTATTTTGATAAAAAGATGCGCGATGTCATTAAAGACGGTGATGTTGCTGCTGCTCTAAAGTATCTTAATGTGAAGTCTTCCACCGATCCAATGTTATATGCTGAATACGATGTCAACAATGATGGAAGAATGAAAAGACTGTTTTGGGCTGATGGGAGTAGTAGGTCTGATTATTTTTGTTTTGGCGACGTTTTGGCGTTTGACACAACGTACAAGAAGAACAAATACAATTATCCGTTGTGTATATTTTCTGGGTGTAACCACCATTCACAGACCATTATATTTGGTGTTGCGTTGTTGGAGGACGAAACAATCGAGTCATATAAGTGGGTCTTGAACCGTTTTTTAGAATGTATGGAAAGTAAGTTCCCAAAAGCAGTGGTAACAGATGGAGATGGATCAATGAGGGAAGCTATTAAACAGGTATTCCCTGATGCATCTCATCGCTTATGTGCCTGGCATTTACACAAGAATGCGCAAGAAAATATAAAGAAAACACCATTTCTGGAGGGGTTTAGAAAAGCAATGTACTCAAATTTTACACCGGAGCAATTTGAGGAGTTTTGGTTAGAGTTAATTCAGAAGAATGAACTTGAAGGAAATGCTTGGGTTATCAAGACATATGCGAACAAGTCACTGTGGGCAACCGCATATTTACGTGATAAGTTCTTTGGACGTATTAGAACCACATCTCAATGTGAAGCTATCAATGCAATTGTCAAGACATATTCTAGAGCCAAAGGCAAAATTTTTGAATTTATGCATAATTTTGAACAGGTTTTGGGAGGTTACAGAAACAATGAGCTTGTTGCTGACTTTAAATCAAAATTCACGGAACCTGTGTTGTCAACTCACCTGCGTTTGATTGAGAGTGATGCTGCCAGAATTTACACAGCAGAGATCTTTAAAGAAGTTAAAGATGAAATTATGGATGCTGGTGCAATACGTCTCGAGGACAAAAAATGTGTGGGGGATACCATGGTTTATACATTGGGAAAATATCGTGAGAAAGGCTTTGAAAGAGACGTTGTATACAATGCTACAAGTTTAGAATTTCAGTGTTCGTGTAGACTATTCGAGTCACGTGGGATTCCATGTTGTCATGTCTTTTTTGTGATGAAGGAAGAGGACATTGATCACATACCAGAATGTTTGGTTATGACACGTTGGACAAAGAACGCAAAAGGTGTGTTTCTGAACAGCGATTCCAATGGGGAAATAGATGCTAATATGATTGAACTTGCTCGATTTGGTGCTTACTGTTCTGCTTTTACTACATTCTGTAAAGAAGCCTCAAAAAAGAATGGTGTTTTTAGGGACATAATGGATGAAATTTTGAATCTTCAAAAAAAGTATTGTGATGTTGAAGACTCTACTCAGTCTAAAAGTTATCAGGTAGGTGATCCGGTCACTGTGAAGAGCAAAGGTGCTCCAAAGAAGAAGAAGAACGCAACAAAAAGTGTCAGACACTGTTCAAGATGCAAAAGTACAAGTCATACCGCAAGGCATTGTTTGGATACGCACAACGCTGAACTTCAATATAATGAAGAATTGGTCTCTATCTCTATTGATGATTCTTTACGCCAAAAAGAGAAGAAAAAGAAAAGAAAACCTAATGGCAATGCTAGCACAAGCAAGCAAAAGAAATGTAAAGAGGCAACAAAAATTCCAGAGATTCCGGAGACAGCTGATTTGCCAGTTACAAATGTAGTTCAACCTCCTGTGAATGTGTTGCAACCTGGTAAATTTCCAATGGAAATGCAAGCAATTTACCCCAATTATGGACTTCATGGTGGTGAATCATCAACTTCCTGTGTTGGGCTCTTGGCACAAGTCATGAATGTTGCTGGTTTTGGACAACAACAGTCATCGCAGTCTTGTTTCTACTCTGCTCAAACTGATTGA
Protein sequence

>Msa0625210

MEHHKDCLDSDSSEEEYTDDLIDDEEHHSSSDAEDDVDGNADDDVHDESVQQEGSISDALASDRFVNVNSIASDEILKLEFGTVDEAYEFYYRYGKCKGFSIRKGDVRRNSSGIITMRQFVCNKNGLRDKKHLSRNDRKRDHRRITRTNCEARLRVHYKAKQGRYVVSSFVEGHNHEVTPRKFTHLHPLYRKISEADRAQLDALQSHGIKTCHIMGYMVAQKGGYTDVGFTKKDLYNYFDKKMRDVIKDGDVAAALKYLNVKSSTDPMLYAEYDVNNDGRMKRLFWADGSSRSDYFCFGDVLAFDTTYKKNKYNYPLCIFSGCNHHSQTIIFGVALLEDETIESYKWVLNRFLECMESKFPKAVVTDGDGSMREAIKQVFPDASHRLCAWHLHKNAQENIKKTPFLEGFRKAMYSNFTPEQFEEFWLELIQKNELEGNAWVIKTYANKSLWATAYLRDKFFGRIRTTSQCEAINAIVKTYSRAKGKIFEFMHNFEQVLGGYRNNELVADFKSKFTEPVLSTHLRLIESDAARIYTAEIFKEVKDEIMDAGAIRLEDKKCVGDTMVYTLGKYREKGFERDVVYNATSLEFQCSCRLFESRGIPCCHVFFVMKEEDIDHIPECLVMTRWTKNAKGVFLNSDSNGEIDANMIELARFGAYCSAFTTFCKEASKKNGVFRDIMDEILNLQKKYCDVEDSTQSKSYQVGDPVTVKSKGAPKKKKNATKSVRHCSRCKSTSHTARHCLDTHNAELQYNEELVSISIDDSLRQKEKKKKRKPNGNASTSKQKKCKEATKIPEIPETADLPVTNVVQPPVNVLQPGKFPMEMQAIYPNYGLHGGESSTSCVGLLAQVMNVAGFGQQQSSQSCFYSAQTD*