AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1020600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020600 MtrunA17_Chr2g0287651 92.440 873 54 2 1 861 1 873 0.0 1618
Msa1020600 MtrunA17_Chr1g0203051 37.545 554 344 1 66 619 70 621 1.76e-134 415
Msa1020600 MtrunA17_Chr5g0448761 32.389 565 370 8 79 633 64 626 1.73e-97 322
Msa1020600 MtrunA17_Chr1g0202341 30.449 624 407 13 19 632 3 609 4.98e-96 315
Msa1020600 MtrunA17_Chr3g0082121 31.411 659 399 18 77 710 45 675 6.22e-91 302
Msa1020600 MtrunA17_Chr8g0363841 30.743 579 380 7 71 635 9 580 5.30e-90 299
Msa1020600 MtrunA17_Chr2g0324011 29.768 561 385 4 77 632 12 568 1.33e-85 285
Msa1020600 MtrunA17_Chr2g0296781 28.979 666 439 12 79 722 1 654 1.91e-84 285
Msa1020600 MtrunA17_Chr1g0207551 29.195 596 402 9 48 632 3 589 2.40e-80 276
Msa1020600 MtrunA17_Chr5g0441581 29.329 566 370 8 79 632 36 583 2.33e-78 268
Msa1020600 MtrunA17_Chr6g0477261 29.213 534 359 6 208 723 12 544 2.04e-75 259
Msa1020600 MtrunA17_Chr3g0080351 29.102 646 397 16 79 700 80 688 2.29e-74 260
Msa1020600 MtrunA17_Chr6g0458391 28.374 578 377 11 66 632 214 765 1.27e-70 248
Msa1020600 MtrunA17_Chr5g0440451 27.560 664 378 19 54 668 24 633 1.66e-68 245
Msa1020600 MtrunA17_Chr2g0329031 27.257 565 379 12 78 631 17 560 9.31e-68 239
Msa1020600 MtrunA17_Chr1g0198761 27.379 683 444 17 81 728 53 718 6.15e-67 238
Msa1020600 MtrunA17_Chr1g0203721 26.868 562 394 9 81 632 69 623 1.93e-66 238
Msa1020600 MtrunA17_Chr5g0448511 31.726 394 252 9 255 637 16 403 4.89e-64 225
Msa1020600 MtrunA17_Chr1g0196541 25.943 663 458 10 79 722 1 649 7.22e-64 228
Msa1020600 MtrunA17_Chr2g0287061 28.322 572 340 13 80 635 188 705 4.73e-63 227
Msa1020600 MtrunA17_Chr2g0276841 27.826 575 365 15 81 629 76 626 2.85e-60 218
Msa1020600 MtrunA17_Chr2g0291581 27.634 579 366 17 77 632 73 621 7.61e-60 216
Msa1020600 MtrunA17_Chr2g0294841 27.317 615 404 13 33 627 12 603 2.30e-59 216
Msa1020600 MtrunA17_Chr3g0118611 26.667 480 339 6 251 725 118 589 8.64e-56 206
Msa1020600 MtrunA17_Chr5g0431001 28.995 438 287 9 68 486 53 485 5.90e-55 198
Msa1020600 MtrunA17_Chr2g0290391 25.578 606 408 13 50 629 22 610 1.00e-54 202
Msa1020600 MtrunA17_Chr2g0291591 28.484 488 307 11 79 547 68 532 2.06e-54 198
Msa1020600 MtrunA17_Chr1g0164591 32.787 305 191 4 161 460 8 303 2.57e-50 180
Msa1020600 MtrunA17_Chr7g0258861 33.569 283 184 3 79 359 14 294 1.88e-44 162
Msa1020600 MtrunA17_Chr2g0308841 33.772 228 148 1 404 631 2 226 7.92e-42 154
Msa1020600 MtrunA17_Chr8g0389811 31.088 193 116 3 9 187 7 196 2.52e-19 87.4
Msa1020600 MtrunA17_Chr1g0171741 29.703 202 127 5 8 205 72 262 2.61e-17 82.8
Msa1020600 MtrunA17_Chr8g0340801 33.645 107 69 1 188 294 3 107 1.07e-16 76.6
Msa1020600 MtrunA17_Chr2g0331371 31.200 125 86 0 66 190 46 170 5.59e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020600 AT4G38180.1 32.244 673 428 10 12 670 16 674 4.81e-104 340
Msa1020600 AT4G15090.1 27.217 654 446 12 32 668 2 642 1.41e-82 283
Msa1020600 AT4G15090.5 27.217 654 446 12 32 668 2 642 1.41e-82 283
Msa1020600 AT4G15090.3 27.217 654 446 12 32 668 2 642 1.41e-82 283
Msa1020600 AT4G15090.2 27.217 654 446 12 32 668 2 642 1.41e-82 283
Msa1020600 AT4G15090.4 27.217 654 446 12 32 668 2 642 1.41e-82 283
Msa1020600 AT3G22170.2 26.517 758 487 17 34 764 29 743 3.64e-75 263
Msa1020600 AT3G22170.1 26.517 758 487 17 34 764 29 743 3.64e-75 263
Msa1020600 AT3G06250.2 28.296 622 381 14 72 681 187 755 8.24e-73 254
Msa1020600 AT3G06250.1 28.296 622 381 14 72 681 187 755 8.24e-73 254
Msa1020600 AT3G06250.3 28.296 622 381 14 72 681 187 755 8.24e-73 254
Msa1020600 AT5G18960.2 28.250 623 369 18 79 681 215 779 3.16e-68 242
Msa1020600 AT5G18960.1 28.250 623 369 18 79 681 215 779 3.16e-68 242
Msa1020600 AT1G76320.3 27.006 648 428 13 79 707 1 622 2.21e-67 238
Msa1020600 AT1G76320.2 27.006 648 428 13 79 707 1 622 2.96e-67 238
Msa1020600 AT1G76320.1 27.006 648 428 13 79 707 1 622 3.03e-67 238
Msa1020600 AT1G76320.4 27.006 648 428 13 79 707 1 622 3.03e-67 238
Msa1020600 AT1G10240.2 27.231 650 391 19 47 651 14 626 2.52e-60 218
Msa1020600 AT1G10240.1 27.231 650 391 19 47 651 14 626 2.52e-60 218
Msa1020600 AT1G80010.1 27.113 627 398 18 51 645 75 674 6.57e-60 218
Msa1020600 AT2G27110.2 27.210 577 363 15 73 634 47 581 2.16e-59 218
Msa1020600 AT2G27110.1 27.210 577 363 15 73 634 47 581 2.16e-59 218
Msa1020600 AT4G19990.3 27.730 577 352 15 80 633 26 560 1.13e-58 214
Msa1020600 AT4G19990.4 27.730 577 352 15 80 633 26 560 1.13e-58 214
Msa1020600 AT4G19990.5 27.730 577 352 15 80 633 26 560 1.24e-58 214
Msa1020600 AT4G19990.6 27.730 577 352 15 80 633 26 560 1.96e-58 214
Msa1020600 AT4G19990.2 27.730 577 352 15 80 633 26 560 1.96e-58 214
Msa1020600 AT4G19990.7 27.730 577 352 15 80 633 40 574 2.10e-58 214
Msa1020600 AT2G32250.5 24.383 648 423 12 42 681 3 591 2.37e-55 205
Msa1020600 AT2G32250.2 24.383 648 423 12 42 681 3 591 4.39e-55 205
Msa1020600 AT2G32250.4 24.383 648 423 12 42 681 3 591 4.39e-55 205
Msa1020600 AT2G32250.6 24.383 648 423 12 42 681 3 591 4.65e-55 205
Msa1020600 AT2G32250.1 24.383 648 423 12 42 681 3 591 4.65e-55 205
Msa1020600 AT2G32250.3 24.383 648 423 12 42 681 3 591 4.65e-55 205
Msa1020600 AT2G32250.8 24.795 609 393 11 79 681 1 550 6.27e-55 204
Msa1020600 AT2G32250.7 24.795 609 393 11 79 681 1 550 7.12e-55 204
Msa1020600 AT2G27110.3 30.479 397 252 8 251 634 51 436 6.06e-54 200
Msa1020600 AT4G19990.1 27.811 507 313 12 138 633 39 503 1.86e-53 198
Msa1020600 AT1G52520.1 26.621 586 393 13 79 647 89 654 2.27e-53 198
Msa1020600 AT5G28530.1 25.127 589 397 14 81 643 61 631 1.31e-50 190
Msa1020600 AT4G38170.1 28.278 389 264 7 252 632 18 399 4.15e-50 186
Msa1020600 AT5G28530.3 25.297 589 392 15 81 643 61 627 4.30e-50 188
Msa1020600 AT5G28530.2 25.297 589 392 15 81 643 61 627 4.30e-50 188
Msa1020600 AT5G28530.4 22.648 574 367 13 81 643 61 568 1.38e-35 144
Msa1020600 AT5G28530.5 22.822 574 362 14 81 643 61 564 5.27e-35 142

Find 147 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTCTTAAACTTGAATT+TGG 0.181995 7_1:-44319905 Msa1020600:CDS
TATAAAGAAAACACCATTTC+TGG 0.203193 7_1:-44318931 Msa1020600:CDS
CATTCACAGACCATTATATT+TGG 0.215412 7_1:-44319152 Msa1020600:CDS
GCCACCATGAAGTCCATAAT+TGG 0.217061 7_1:+44317462 None:intergenic
CAAGCAATTTACCCCAATTA+TGG 0.222640 7_1:-44317475 Msa1020600:CDS
GTTGCGTTCTTCTTCTTCTT+TGG 0.224742 7_1:+44317985 None:intergenic
TATTTACGTGATAAGTTCTT+TGG 0.228072 7_1:-44318765 Msa1020600:CDS
CCATCTGTTACCACTGCTTT+TGG 0.236832 7_1:+44319047 None:intergenic
GTCATGAATGTTGCTGGTTT+TGG 0.255328 7_1:-44317403 Msa1020600:CDS
GAAGAATGAAAAGACTGTTT+TGG 0.262348 7_1:-44319292 Msa1020600:CDS
CGGAGCAATTTGAGGAGTTT+TGG 0.270030 7_1:-44318872 Msa1020600:CDS
AATCAAAACCTGTCATATAA+TGG 0.273083 7_1:-44319504 Msa1020600:CDS
AGAAGTTAAAGATGAAATTA+TGG 0.274889 7_1:-44318508 Msa1020600:CDS
CTGTCATATAATGGGATATA+TGG 0.287437 7_1:-44319495 Msa1020600:CDS
AACTTCCTGTGTTGGGCTCT+TGG 0.288676 7_1:-44317431 Msa1020600:CDS
TAGGGTTGCAATTGAAGATT+TGG 0.310553 7_1:-44317149 Msa1020600:three_prime_UTR
CTTGTGCTAGCATTGCCATT+AGG 0.324197 7_1:+44317625 None:intergenic
GCCTTGCTTCGCAATTTGTT+CGG 0.326898 7_1:+44319690 None:intergenic
TAGCTAATTTAAGACTCAAT+AGG 0.330926 7_1:-44317324 Msa1020600:three_prime_UTR
TACCCCAATTATGGACTTCA+TGG 0.332590 7_1:-44317466 Msa1020600:CDS
CCTTGCTTCGCAATTTGTTC+GGG 0.333508 7_1:+44319691 None:intergenic
ATGATTGAACTTGCTCGATT+TGG 0.365589 7_1:-44318186 Msa1020600:CDS
CCATTAGGAAAGGTGATGTT+AGG 0.366141 7_1:-44319826 Msa1020600:CDS
ATCAAAACCTGTCATATAAT+GGG 0.369316 7_1:-44319503 Msa1020600:CDS
TGATCACATACCAGAATGTT+TGG 0.370163 7_1:-44318283 Msa1020600:CDS
TACTCAGTCTAAAAGTTATC+AGG 0.373452 7_1:-44318043 Msa1020600:CDS
ATTTACGTGGGGTTACTTCA+TGG 0.380615 7_1:+44319603 None:intergenic
TCAGCTGTCTCCGGAATCTC+TGG 0.384192 7_1:+44317568 None:intergenic
GGTTGAACTACATTTGTAAC+TGG 0.389125 7_1:+44317541 None:intergenic
ACTTCAATATAATGAAGAAT+TGG 0.390431 7_1:-44317783 Msa1020600:CDS
CCACCATGAAGTCCATAATT+GGG 0.390991 7_1:+44317463 None:intergenic
GTAAAATTTCTGAAGCAGAT+AGG 0.391444 7_1:-44319556 Msa1020600:CDS
GATCTCTGCTGTGTAAATTC+TGG 0.392583 7_1:+44318536 None:intergenic
CCTAACATCACCTTTCCTAA+TGG 0.392597 7_1:+44319826 None:intergenic
GCACAAGTCATGAATGTTGC+TGG 0.402938 7_1:-44317409 Msa1020600:CDS
CAACGCAACACCAAATATAA+TGG 0.414453 7_1:+44319142 None:intergenic
CAGTTTGTGTGCAACAAGAA+TGG 0.415144 7_1:-44319773 Msa1020600:CDS
TATATTTGGTGTTGCGTTGT+TGG 0.419803 7_1:-44319138 Msa1020600:CDS
TTTCTAAACCCCTCCAGAAA+TGG 0.421587 7_1:+44318918 None:intergenic
TGTACTTCAGTCGTTGTGTT+TGG 0.423350 7_1:-44317185 Msa1020600:three_prime_UTR
GAGACAAGAAGCACTTATCT+AGG 0.423504 7_1:-44319745 Msa1020600:CDS
CGTGTCATAACCAAACATTC+TGG 0.425974 7_1:+44318273 None:intergenic
CGCATTCTTGTGTAAATGCC+AGG 0.430292 7_1:+44318962 None:intergenic
GGAACACCACAAAGACTGTT+TGG 0.430519 7_1:-44320125 Msa1020600:CDS
CATCTCATCGCTTATGTGCC+TGG 0.431687 7_1:-44318980 Msa1020600:CDS
TTCTGAACAGCGATTCCAAT+GGG 0.432579 7_1:-44318224 Msa1020600:CDS
TGACTTTAAATCAAAATTCA+CGG 0.435713 7_1:-44318604 Msa1020600:CDS
GTATTCTTCTTCACTGGAAT+CGG 0.437019 7_1:+44320099 None:intergenic
TTTGGGCTGATGGGAGTAGT+AGG 0.444063 7_1:-44319274 Msa1020600:CDS
ATCTGTGTATTCTTCTTCAC+TGG 0.444466 7_1:+44320093 None:intergenic
TAAATTGCTTGCATTTCCAT+TGG 0.446330 7_1:+44317487 None:intergenic
ATTTAACTTATGAAACTGAA+TGG 0.449490 7_1:-44317109 Msa1020600:three_prime_UTR
GAATCATCAACTTCCTGTGT+TGG 0.451014 7_1:-44317439 Msa1020600:CDS
CCAGGTTGCAACACATTCAC+AGG 0.453864 7_1:+44317517 None:intergenic
AATCATCAACTTCCTGTGTT+GGG 0.454338 7_1:-44317438 Msa1020600:CDS
CATAAGCGATGAGATGCATC+AGG 0.456050 7_1:+44318987 None:intergenic
AGCTAATTTAAGACTCAATA+GGG 0.458746 7_1:-44317323 Msa1020600:three_prime_UTR
GATACCATGGTTTATACATT+GGG 0.461449 7_1:-44318444 Msa1020600:CDS
TGAACTTGAAGGAAATGCTT+GGG 0.462518 7_1:-44318829 Msa1020600:CDS
AATGAGGGAAGCTATTAAAC+AGG 0.464184 7_1:-44319015 Msa1020600:CDS
ATTCAGAAGAATGAACTTGA+AGG 0.466546 7_1:-44318840 Msa1020600:CDS
ATTAGCATCTATTTCCCCAT+TGG 0.467480 7_1:+44318209 None:intergenic
AGCACTTATCTAGGAATGAT+AGG 0.468246 7_1:-44319736 Msa1020600:CDS
AGTTTGTGTGCAACAAGAAT+GGG 0.470588 7_1:-44319772 Msa1020600:CDS
TAAAATTTCTGAAGCAGATA+GGG 0.473779 7_1:-44319555 Msa1020600:CDS
AAGAATTTCATCAGAGGCAA+TGG 0.477228 7_1:+44319919 None:intergenic
TTTGGATGTTTGATCACATA+GGG 0.478828 7_1:-44317167 Msa1020600:three_prime_UTR
ATGAACTTGAAGGAAATGCT+TGG 0.479360 7_1:-44318830 Msa1020600:CDS
GGGATATATGGTTGCTCAGA+AGG 0.480775 7_1:-44319483 Msa1020600:CDS
GTTATCAACATCACCATGGC+AGG 0.493355 7_1:-44317055 None:intergenic
CATATATCCCATTATATGAC+AGG 0.494595 7_1:+44319496 None:intergenic
CCTTTGCTCTTCACAGTGAC+CGG 0.495645 7_1:+44318012 None:intergenic
GGATACCATGGTTTATACAT+TGG 0.504775 7_1:-44318445 Msa1020600:CDS
AAGTTATCAGGTAGGTGATC+CGG 0.508654 7_1:-44318031 Msa1020600:CDS
ACTGGCAAATCAGCTGTCTC+CGG 0.514020 7_1:+44317559 None:intergenic
TTGGGAAAATATCGTGAGAA+AGG 0.514905 7_1:-44318426 Msa1020600:CDS
GATGCTGAAGATGATGTTGA+TGG 0.520081 7_1:-44320034 Msa1020600:CDS
CAATATAAGTAACACTCAAA+CGG 0.521512 7_1:+44317084 None:intergenic
CGTTGGACAAAGAACGCAAA+AGG 0.525733 7_1:-44318252 Msa1020600:CDS
CGGAGTCCAAACAGTCTTTG+TGG 0.529107 7_1:+44320119 None:intergenic
ATTTCCATTGGAAATTTACC+AGG 0.529349 7_1:+44317499 None:intergenic
TATCGTTATGGAAAATGCAA+AGG 0.529410 7_1:-44319854 Msa1020600:CDS
AGAAAACACCATTTCTGGAG+GGG 0.531592 7_1:-44318926 Msa1020600:CDS
CAAGCAAAAGAAATGTAAAG+AGG 0.532177 7_1:-44317602 Msa1020600:CDS
CAAAACTCCTCAAATTGCTC+CGG 0.533339 7_1:+44318873 None:intergenic
GCGATGCATTAGCAAGTGAC+AGG 0.533703 7_1:-44319958 Msa1020600:CDS
CTTGATGCTCTTCAATCACA+TGG 0.535182 7_1:-44319527 Msa1020600:CDS
TGATTGAAGAGCATCAAGTT+GGG 0.536427 7_1:+44319532 None:intergenic
AAGGGTGGATATACTGATGT+AGG 0.538008 7_1:-44319464 Msa1020600:CDS
GTGATTGAAGAGCATCAAGT+TGG 0.540889 7_1:+44319531 None:intergenic
CTGCTCAAACTGATTGAAGC+TGG 0.542661 7_1:-44317348 Msa1020600:exon
CCTGTGAATGTGTTGCAACC+TGG 0.546145 7_1:-44317517 Msa1020600:CDS
GAATACGATGTCAACAATGA+TGG 0.547496 7_1:-44319314 Msa1020600:CDS
ATTTGGTGTTGCGTTGTTGG+AGG 0.548289 7_1:-44319135 Msa1020600:CDS
AAAGATGAAATTATGGATGC+TGG 0.553017 7_1:-44318501 Msa1020600:CDS
CCCGAACAAATTGCGAAGCA+AGG 0.553648 7_1:-44319691 Msa1020600:CDS
AAGAAAACACCATTTCTGGA+GGG 0.560073 7_1:-44318927 Msa1020600:CDS
CCAAAAGCAGTGGTAACAGA+TGG 0.564129 7_1:-44319047 Msa1020600:CDS
GTTTGGATGTTTGATCACAT+AGG 0.564529 7_1:-44317168 Msa1020600:three_prime_UTR
GCAACCTGGTAAATTTCCAA+TGG 0.569433 7_1:-44317503 Msa1020600:CDS
CAAATATAATGGTCTGTGAA+TGG 0.569710 7_1:+44319153 None:intergenic
AGATGGAGATGGATCAATGA+GGG 0.572748 7_1:-44319030 Msa1020600:CDS
AAACAATCGAGTCATATAAG+TGG 0.575797 7_1:-44319109 Msa1020600:CDS
GATGTTAGGCGCAATAGTAG+TGG 0.581865 7_1:-44319812 Msa1020600:CDS
AAGACATATTCTAGAGCCAA+AGG 0.582373 7_1:-44318696 Msa1020600:CDS
AGCATATAACATTGGATCGG+TGG 0.585153 7_1:+44319337 None:intergenic
AACAATCGAGTCATATAAGT+GGG 0.589510 7_1:-44319108 Msa1020600:CDS
GGATATATGGTTGCTCAGAA+GGG 0.589834 7_1:-44319482 Msa1020600:CDS
GATAGCTTCACATTGAGATG+TGG 0.595390 7_1:+44318731 None:intergenic
TTTCTGAACAGCGATTCCAA+TGG 0.598192 7_1:-44318225 Msa1020600:CDS
GCAAGTGTGTAAATTTACGT+GGG 0.600179 7_1:+44319591 None:intergenic
TGATGAATCAGTTCAACAAG+AGG 0.603374 7_1:-44319990 Msa1020600:CDS
AAAGAAAACACCATTTCTGG+AGG 0.609498 7_1:-44318928 Msa1020600:CDS
CCGGTCACTGTGAAGAGCAA+AGG 0.613504 7_1:-44318012 Msa1020600:CDS
TATATGGTTGCTCAGAAGGG+TGG 0.613989 7_1:-44319479 Msa1020600:CDS
TTCAGCATATAACATTGGAT+CGG 0.614583 7_1:+44319334 None:intergenic
TGCTGGTGCAATACGTCTCG+AGG 0.619998 7_1:-44318484 Msa1020600:CDS
CACCATGAAGTCCATAATTG+GGG 0.620720 7_1:+44317464 None:intergenic
CCCAATTATGGACTTCATGG+TGG 0.624782 7_1:-44317463 Msa1020600:CDS
AAGTTTAAGAATTTCATCAG+AGG 0.626746 7_1:+44319913 None:intergenic
GTGCATTACAAAGCTAAACA+AGG 0.632644 7_1:-44319662 Msa1020600:CDS
TCGTATTCAGCATATAACAT+TGG 0.632685 7_1:+44319329 None:intergenic
CAGTCTAAAAGTTATCAGGT+AGG 0.641408 7_1:-44318039 Msa1020600:CDS
TGCAAGTGTGTAAATTTACG+TGG 0.643723 7_1:+44319590 None:intergenic
ATGCGCGATGTCATTAAAGA+CGG 0.646118 7_1:-44319401 Msa1020600:CDS
AAGTAAGTTCCCAAAAGCAG+TGG 0.654507 7_1:-44319057 Msa1020600:CDS
GAACTTATCACGTAAATATG+CGG 0.655600 7_1:+44318770 None:intergenic
TGTAGACTATTCGAGTCACG+TGG 0.658455 7_1:-44318351 Msa1020600:CDS
TTGTGCCAAGAGCCCAACAC+AGG 0.660751 7_1:+44317426 None:intergenic
TGCATTACAAAGCTAAACAA+GGG 0.661066 7_1:-44319661 Msa1020600:CDS
AATGTTTGGTTATGACACGT+TGG 0.662725 7_1:-44318269 Msa1020600:CDS
GCAGTGGTAACAGATGGAGA+TGG 0.663593 7_1:-44319041 Msa1020600:CDS
ATATGCGAACAAGTCACTGT+GGG 0.664385 7_1:-44318796 Msa1020600:CDS
GATGAATCAGTTCAACAAGA+GGG 0.669122 7_1:-44319989 Msa1020600:CDS
CGCAGGTGAGTTGACAACAC+AGG 0.673245 7_1:+44318579 None:intergenic
CATCACTCTCAATCAAACGC+AGG 0.673784 7_1:+44318562 None:intergenic
GGTTGCAACACATTCACAGG+AGG 0.686316 7_1:+44317520 None:intergenic
CAAGTGTGTAAATTTACGTG+GGG 0.688606 7_1:+44319592 None:intergenic
CACCCAGAAAATATACACAA+CGG 0.691486 7_1:+44319182 None:intergenic
ATATAATGGTCTGTGAATGG+TGG 0.703942 7_1:+44319156 None:intergenic
GTAGTGGAATAATTACAATG+AGG 0.704741 7_1:-44319796 Msa1020600:CDS
CAGATGGAGATGGATCAATG+AGG 0.711130 7_1:-44319031 Msa1020600:CDS
ATAAGCGATGAGATGCATCA+GGG 0.712304 7_1:+44318988 None:intergenic
TCTGAACAGCGATTCCAATG+GGG 0.714485 7_1:-44318223 Msa1020600:CDS
CATATGCGAACAAGTCACTG+TGG 0.716941 7_1:-44318797 Msa1020600:CDS
ATATGTTATCAACATCACCA+TGG 0.721154 7_1:-44317059 Msa1020600:three_prime_UTR
GTAGACTATTCGAGTCACGT+GGG 0.777031 7_1:-44318350 Msa1020600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGAATTTTATTATCGTTA+TGG - chr7_1:44317319-44317338 Msa1020600:three_prime_UTR 15.0%
!! ACATTATAATTCTTAATTCA+TGG + chr7_1:44319323-44319342 None:intergenic 15.0%
!! GAAATTCTTAAACTTGAATT+TGG - chr7_1:44317280-44317299 Msa1020600:three_prime_UTR 20.0%
!!! TTTCCATACATTCTAAAAAA+CGG + chr7_1:44318110-44318129 None:intergenic 20.0%
!!! AAATTCAAAAATTTTGCCTT+TGG + chr7_1:44318508-44318527 None:intergenic 20.0%
!!! ATTTATGCATAATTTTGAAC+AGG - chr7_1:44318524-44318543 Msa1020600:CDS 20.0%
!! TGACTTTAAATCAAAATTCA+CGG - chr7_1:44318581-44318600 Msa1020600:CDS 20.0%
!! AGAAGTTAAAGATGAAATTA+TGG - chr7_1:44318677-44318696 Msa1020600:CDS 20.0%
!!! AAAAAAGAATGGTGTTTTTA+GGG - chr7_1:44319064-44319083 Msa1020600:CDS 20.0%
!!! GCAATTTTTTTTTTTTTTGC+AGG - chr7_1:44319361-44319380 Msa1020600:CDS 20.0%
!! ACTTCAATATAATGAAGAAT+TGG - chr7_1:44319402-44319421 Msa1020600:CDS 20.0%
!! ATCTAATATTGTTGCATAAA+AGG + chr7_1:44319487-44319506 None:intergenic 20.0%
!! AAAAAGAAAAGAAAACCTAA+TGG - chr7_1:44319545-44319564 Msa1020600:CDS 20.0%
!!! ATATCAGAGAACTTTTTTTT+TGG - chr7_1:44319949-44319968 Msa1020600:CDS 20.0%
!!! ATTTAACTTATGAAACTGAA+TGG - chr7_1:44320076-44320095 Msa1020600:CDS 20.0%
! AAGTTTAAGAATTTCATCAG+AGG + chr7_1:44317275-44317294 None:intergenic 25.0%
!!! TAAAATTTCTGAAGCAGATA+GGG - chr7_1:44317630-44317649 Msa1020600:CDS 25.0%
! AATCAAAACCTGTCATATAA+TGG - chr7_1:44317681-44317700 Msa1020600:intron 25.0%
! ATCAAAACCTGTCATATAAT+GGG - chr7_1:44317682-44317701 Msa1020600:intron 25.0%
!! AAGAATGAAAAGACTGTTTT+GGG - chr7_1:44317894-44317913 Msa1020600:intron 25.0%
!!! AGGTCTGATTATTTTTGTTT+TGG - chr7_1:44317931-44317950 Msa1020600:intron 25.0%
! TATAAAGAAAACACCATTTC+TGG - chr7_1:44318254-44318273 Msa1020600:CDS 25.0%
!! AATGTACTCAAATTTTACAC+CGG - chr7_1:44318293-44318312 Msa1020600:CDS 25.0%
! TATTTACGTGATAAGTTCTT+TGG - chr7_1:44318420-44318439 Msa1020600:CDS 25.0%
!! CATAATTTTGAACAGGTTTT+GGG - chr7_1:44318531-44318550 Msa1020600:CDS 25.0%
!!! AAAAACACCATTCTTTTTTG+AGG + chr7_1:44319063-44319082 None:intergenic 25.0%
!! CAAAAAAGAATGGTGTTTTT+AGG - chr7_1:44319063-44319082 Msa1020600:CDS 25.0%
!! ACAAATATACCTTCTCTTTT+TGG + chr7_1:44319456-44319475 None:intergenic 25.0%
!! TAGCTAATTTAAGACTCAAT+AGG - chr7_1:44319861-44319880 Msa1020600:CDS 25.0%
!! AGCTAATTTAAGACTCAATA+GGG - chr7_1:44319862-44319881 Msa1020600:CDS 25.0%
! CAATATAAGTAACACTCAAA+CGG + chr7_1:44320104-44320123 None:intergenic 25.0%
TATCGTTATGGAAAATGCAA+AGG - chr7_1:44317331-44317350 Msa1020600:three_prime_UTR 30.0%
! AATGCAAAGGTTTTTCCATT+AGG - chr7_1:44317344-44317363 Msa1020600:exon 30.0%
! AAAGGTTTTTCCATTAGGAA+AGG - chr7_1:44317349-44317368 Msa1020600:exon 30.0%
! GTAGTGGAATAATTACAATG+AGG - chr7_1:44317389-44317408 Msa1020600:CDS 30.0%
TGCATTACAAAGCTAAACAA+GGG - chr7_1:44317524-44317543 Msa1020600:CDS 30.0%
! CAGAAATTTTACGATACAGT+GGG + chr7_1:44317621-44317640 None:intergenic 30.0%
! TCAGAAATTTTACGATACAG+TGG + chr7_1:44317622-44317641 None:intergenic 30.0%
!! GTAAAATTTCTGAAGCAGAT+AGG - chr7_1:44317629-44317648 Msa1020600:CDS 30.0%
CATATATCCCATTATATGAC+AGG + chr7_1:44317692-44317711 None:intergenic 30.0%
! CTGTCATATAATGGGATATA+TGG - chr7_1:44317690-44317709 Msa1020600:intron 30.0%
TTCAGCATATAACATTGGAT+CGG + chr7_1:44317854-44317873 None:intergenic 30.0%
TCGTATTCAGCATATAACAT+TGG + chr7_1:44317859-44317878 None:intergenic 30.0%
! GAAGAATGAAAAGACTGTTT+TGG - chr7_1:44317893-44317912 Msa1020600:intron 30.0%
! TATCCGTTGTGTATATTTTC+TGG - chr7_1:44318000-44318019 Msa1020600:CDS 30.0%
! ATCCGTTGTGTATATTTTCT+GGG - chr7_1:44318001-44318020 Msa1020600:CDS 30.0%
CAAATATAATGGTCTGTGAA+TGG + chr7_1:44318035-44318054 None:intergenic 30.0%
CATTCACAGACCATTATATT+TGG - chr7_1:44318033-44318052 Msa1020600:CDS 30.0%
AAACAATCGAGTCATATAAG+TGG - chr7_1:44318076-44318095 Msa1020600:CDS 30.0%
AACAATCGAGTCATATAAGT+GGG - chr7_1:44318077-44318096 Msa1020600:CDS 30.0%
!!! GAACCGTTTTTTAGAATGTA+TGG - chr7_1:44318104-44318123 Msa1020600:CDS 30.0%
ATTCAGAAGAATGAACTTGA+AGG - chr7_1:44318345-44318364 Msa1020600:CDS 30.0%
GAACTTATCACGTAAATATG+CGG + chr7_1:44318418-44318437 None:intergenic 30.0%
! GCATAATTTTGAACAGGTTT+TGG - chr7_1:44318530-44318549 Msa1020600:CDS 30.0%
AAAGATGAAATTATGGATGC+TGG - chr7_1:44318684-44318703 Msa1020600:CDS 30.0%
GATACCATGGTTTATACATT+GGG - chr7_1:44318741-44318760 Msa1020600:CDS 30.0%
! TTTTCCCAATGTATAAACCA+TGG + chr7_1:44318748-44318767 None:intergenic 30.0%
ACAAAAAAGACATGACAACA+TGG + chr7_1:44318864-44318883 None:intergenic 30.0%
!!! TCATGTCTTTTTTGTGATGA+AGG - chr7_1:44318869-44318888 Msa1020600:CDS 30.0%
AAAGAAGCCTCAAAAAAGAA+TGG - chr7_1:44319053-44319072 Msa1020600:CDS 30.0%
TACTCAGTCTAAAAGTTATC+AGG - chr7_1:44319142-44319161 Msa1020600:CDS 30.0%
CAAGCAAAAGAAATGTAAAG+AGG - chr7_1:44319583-44319602 Msa1020600:CDS 30.0%
AACAAAAATTCCAGAGATTC+CGG - chr7_1:44319607-44319626 Msa1020600:CDS 30.0%
ATTTCCATTGGAAATTTACC+AGG + chr7_1:44319689-44319708 None:intergenic 30.0%
TAAATTGCTTGCATTTCCAT+TGG + chr7_1:44319701-44319720 None:intergenic 30.0%
TTTGGATGTTTGATCACATA+GGG - chr7_1:44320018-44320037 Msa1020600:CDS 30.0%
ATATGTTATCAACATCACCA+TGG - chr7_1:44320126-44320145 Msa1020600:CDS 30.0%
GTATTCTTCTTCACTGGAAT+CGG + chr7_1:44317089-44317108 None:intergenic 35.0%
ATCTGTGTATTCTTCTTCAC+TGG + chr7_1:44317095-44317114 None:intergenic 35.0%
TGATGAATCAGTTCAACAAG+AGG - chr7_1:44317195-44317214 Msa1020600:three_prime_UTR 35.0%
GATGAATCAGTTCAACAAGA+GGG - chr7_1:44317196-44317215 Msa1020600:three_prime_UTR 35.0%
AAGAATTTCATCAGAGGCAA+TGG + chr7_1:44317269-44317288 None:intergenic 35.0%
AGTTTGTGTGCAACAAGAAT+GGG - chr7_1:44317413-44317432 Msa1020600:CDS 35.0%
AGCACTTATCTAGGAATGAT+AGG - chr7_1:44317449-44317468 Msa1020600:CDS 35.0%
GTGCATTACAAAGCTAAACA+AGG - chr7_1:44317523-44317542 Msa1020600:CDS 35.0%
!!! TGTAGTGTCTAGTTTTGTAG+AGG - chr7_1:44317552-44317571 Msa1020600:CDS 35.0%
!!! GTAGTGTCTAGTTTTGTAGA+GGG - chr7_1:44317553-44317572 Msa1020600:CDS 35.0%
!!! TAGTGTCTAGTTTTGTAGAG+GGG - chr7_1:44317554-44317573 Msa1020600:CDS 35.0%
CAAGTGTGTAAATTTACGTG+GGG + chr7_1:44317596-44317615 None:intergenic 35.0%
GCAAGTGTGTAAATTTACGT+GGG + chr7_1:44317597-44317616 None:intergenic 35.0%
TGCAAGTGTGTAAATTTACG+TGG + chr7_1:44317598-44317617 None:intergenic 35.0%
!! TGATTGAAGAGCATCAAGTT+GGG + chr7_1:44317656-44317675 None:intergenic 35.0%
GAATACGATGTCAACAATGA+TGG - chr7_1:44317871-44317890 Msa1020600:intron 35.0%
!!! TTTTTGTTTTGGCGACGTTT+TGG - chr7_1:44317942-44317961 Msa1020600:intron 35.0%
CACCCAGAAAATATACACAA+CGG + chr7_1:44318006-44318025 None:intergenic 35.0%
ATATAATGGTCTGTGAATGG+TGG + chr7_1:44318032-44318051 None:intergenic 35.0%
CAACGCAACACCAAATATAA+TGG + chr7_1:44318046-44318065 None:intergenic 35.0%
!! TATATTTGGTGTTGCGTTGT+TGG - chr7_1:44318047-44318066 Msa1020600:CDS 35.0%
AATGAGGGAAGCTATTAAAC+AGG - chr7_1:44318170-44318189 Msa1020600:CDS 35.0%
! AAAGAAAACACCATTTCTGG+AGG - chr7_1:44318257-44318276 Msa1020600:CDS 35.0%
! AAGAAAACACCATTTCTGGA+GGG - chr7_1:44318258-44318277 Msa1020600:CDS 35.0%
ATGAACTTGAAGGAAATGCT+TGG - chr7_1:44318355-44318374 Msa1020600:CDS 35.0%
TGAACTTGAAGGAAATGCTT+GGG - chr7_1:44318356-44318375 Msa1020600:CDS 35.0%
!! AAGACATATTCTAGAGCCAA+AGG - chr7_1:44318489-44318508 Msa1020600:CDS 35.0%
!!! AATTTTGAACAGGTTTTGGG+AGG - chr7_1:44318534-44318553 Msa1020600:CDS 35.0%
GGATACCATGGTTTATACAT+TGG - chr7_1:44318740-44318759 Msa1020600:CDS 35.0%
TTGGGAAAATATCGTGAGAA+AGG - chr7_1:44318759-44318778 Msa1020600:CDS 35.0%
!!! CTTTTTTGTGATGAAGGAAG+AGG - chr7_1:44318875-44318894 Msa1020600:CDS 35.0%
TGATCACATACCAGAATGTT+TGG - chr7_1:44318902-44318921 Msa1020600:CDS 35.0%
AATGTTTGGTTATGACACGT+TGG - chr7_1:44318916-44318935 Msa1020600:CDS 35.0%
ATTAGCATCTATTTCCCCAT+TGG + chr7_1:44318979-44318998 None:intergenic 35.0%
! ATGATTGAACTTGCTCGATT+TGG - chr7_1:44318999-44319018 Msa1020600:CDS 35.0%
!!! TGGTGTTTTTAGGGACATAA+TGG - chr7_1:44319073-44319092 Msa1020600:CDS 35.0%
CAGTCTAAAAGTTATCAGGT+AGG - chr7_1:44319146-44319165 Msa1020600:CDS 35.0%
AATTACCAAACAATGCCTTG+CGG + chr7_1:44319270-44319289 None:intergenic 35.0%
TTCTTTACGCCAAAAAGAGA+AGG - chr7_1:44319444-44319463 Msa1020600:CDS 35.0%
GGTTGAACTACATTTGTAAC+TGG + chr7_1:44319647-44319666 None:intergenic 35.0%
CAAGCAATTTACCCCAATTA+TGG - chr7_1:44319710-44319729 Msa1020600:CDS 35.0%
AATCATCAACTTCCTGTGTT+GGG - chr7_1:44319747-44319766 Msa1020600:CDS 35.0%
GTTTGGATGTTTGATCACAT+AGG - chr7_1:44320017-44320036 Msa1020600:CDS 35.0%
TAGGGTTGCAATTGAAGATT+TGG - chr7_1:44320036-44320055 Msa1020600:CDS 35.0%
GATGCTGAAGATGATGTTGA+TGG - chr7_1:44317151-44317170 Msa1020600:three_prime_UTR 40.0%
CCTAACATCACCTTTCCTAA+TGG + chr7_1:44317362-44317381 None:intergenic 40.0%
CCATTAGGAAAGGTGATGTT+AGG - chr7_1:44317359-44317378 Msa1020600:CDS 40.0%
CAGTTTGTGTGCAACAAGAA+TGG - chr7_1:44317412-44317431 Msa1020600:CDS 40.0%
!! GAGACAAGAAGCACTTATCT+AGG - chr7_1:44317440-44317459 Msa1020600:CDS 40.0%
ATTTACGTGGGGTTACTTCA+TGG + chr7_1:44317585-44317604 None:intergenic 40.0%
!! GTGATTGAAGAGCATCAAGT+TGG + chr7_1:44317657-44317676 None:intergenic 40.0%
CTTGATGCTCTTCAATCACA+TGG - chr7_1:44317658-44317677 Msa1020600:intron 40.0%
GGATATATGGTTGCTCAGAA+GGG - chr7_1:44317703-44317722 Msa1020600:intron 40.0%
AAGGGTGGATATACTGATGT+AGG - chr7_1:44317721-44317740 Msa1020600:intron 40.0%
ATGCGCGATGTCATTAAAGA+CGG - chr7_1:44317784-44317803 Msa1020600:CDS 40.0%
AGCATATAACATTGGATCGG+TGG + chr7_1:44317851-44317870 None:intergenic 40.0%
!! AAAAGACTGTTTTGGGCTGA+TGG - chr7_1:44317901-44317920 Msa1020600:intron 40.0%
!! AAAGACTGTTTTGGGCTGAT+GGG - chr7_1:44317902-44317921 Msa1020600:intron 40.0%
AAGTAAGTTCCCAAAAGCAG+TGG - chr7_1:44318128-44318147 Msa1020600:CDS 40.0%
!! CATCTGTTACCACTGCTTTT+GGG + chr7_1:44318140-44318159 None:intergenic 40.0%
AGATGGAGATGGATCAATGA+GGG - chr7_1:44318155-44318174 Msa1020600:CDS 40.0%
ATAAGCGATGAGATGCATCA+GGG + chr7_1:44318200-44318219 None:intergenic 40.0%
! AGAAAACACCATTTCTGGAG+GGG - chr7_1:44318259-44318278 Msa1020600:CDS 40.0%
TTTCTAAACCCCTCCAGAAA+TGG + chr7_1:44318270-44318289 None:intergenic 40.0%
! TTTTACACCGGAGCAATTTG+AGG - chr7_1:44318305-44318324 Msa1020600:CDS 40.0%
CAAAACTCCTCAAATTGCTC+CGG + chr7_1:44318315-44318334 None:intergenic 40.0%
ATATGCGAACAAGTCACTGT+GGG - chr7_1:44318389-44318408 Msa1020600:CDS 40.0%
GATAGCTTCACATTGAGATG+TGG + chr7_1:44318457-44318476 None:intergenic 40.0%
GATCTCTGCTGTGTAAATTC+TGG + chr7_1:44318652-44318671 None:intergenic 40.0%
TCTCGAGGACAAAAAATGTG+TGG - chr7_1:44318716-44318735 Msa1020600:CDS 40.0%
CTCGAGGACAAAAAATGTGT+GGG - chr7_1:44318717-44318736 Msa1020600:CDS 40.0%
TCGAGGACAAAAAATGTGTG+GGG - chr7_1:44318718-44318737 Msa1020600:CDS 40.0%
CGTGTCATAACCAAACATTC+TGG + chr7_1:44318915-44318934 None:intergenic 40.0%
TTTCTGAACAGCGATTCCAA+TGG - chr7_1:44318960-44318979 Msa1020600:CDS 40.0%
TTCTGAACAGCGATTCCAAT+GGG - chr7_1:44318961-44318980 Msa1020600:CDS 40.0%
AAGTTATCAGGTAGGTGATC+CGG - chr7_1:44319154-44319173 Msa1020600:CDS 40.0%
GTTGCGTTCTTCTTCTTCTT+TGG + chr7_1:44319203-44319222 None:intergenic 40.0%
AAAGTACAAGTCATACCGCA+AGG - chr7_1:44319252-44319271 Msa1020600:CDS 40.0%
GCAACCTGGTAAATTTCCAA+TGG - chr7_1:44319682-44319701 Msa1020600:CDS 40.0%
TACCCCAATTATGGACTTCA+TGG - chr7_1:44319719-44319738 Msa1020600:CDS 40.0%
CACCATGAAGTCCATAATTG+GGG + chr7_1:44319724-44319743 None:intergenic 40.0%
CCACCATGAAGTCCATAATT+GGG + chr7_1:44319725-44319744 None:intergenic 40.0%
GAATCATCAACTTCCTGTGT+TGG - chr7_1:44319746-44319765 Msa1020600:CDS 40.0%
!!! GTCATGAATGTTGCTGGTTT+TGG - chr7_1:44319782-44319801 Msa1020600:CDS 40.0%
TGTACTTCAGTCGTTGTGTT+TGG - chr7_1:44320000-44320019 Msa1020600:CDS 40.0%
GGAACACCACAAAGACTGTT+TGG - chr7_1:44317060-44317079 Msa1020600:three_prime_UTR 45.0%
GATGTTAGGCGCAATAGTAG+TGG - chr7_1:44317373-44317392 Msa1020600:CDS 45.0%
! CCTTGCTTCGCAATTTGTTC+GGG + chr7_1:44317497-44317516 None:intergenic 45.0%
! GCCTTGCTTCGCAATTTGTT+CGG + chr7_1:44317498-44317517 None:intergenic 45.0%
GGGATATATGGTTGCTCAGA+AGG - chr7_1:44317702-44317721 Msa1020600:intron 45.0%
TATATGGTTGCTCAGAAGGG+TGG - chr7_1:44317706-44317725 Msa1020600:intron 45.0%
!! ATTTGGTGTTGCGTTGTTGG+AGG - chr7_1:44318050-44318069 Msa1020600:CDS 45.0%
! CCATCTGTTACCACTGCTTT+TGG + chr7_1:44318141-44318160 None:intergenic 45.0%
CCAAAAGCAGTGGTAACAGA+TGG - chr7_1:44318138-44318157 Msa1020600:CDS 45.0%
CAGATGGAGATGGATCAATG+AGG - chr7_1:44318154-44318173 Msa1020600:CDS 45.0%
CATAAGCGATGAGATGCATC+AGG + chr7_1:44318201-44318220 None:intergenic 45.0%
CGCATTCTTGTGTAAATGCC+AGG + chr7_1:44318226-44318245 None:intergenic 45.0%
! CGGAGCAATTTGAGGAGTTT+TGG - chr7_1:44318313-44318332 Msa1020600:CDS 45.0%
CATATGCGAACAAGTCACTG+TGG - chr7_1:44318388-44318407 Msa1020600:CDS 45.0%
CATCACTCTCAATCAAACGC+AGG + chr7_1:44318626-44318645 None:intergenic 45.0%
CGAGGACAAAAAATGTGTGG+GGG - chr7_1:44318719-44318738 Msa1020600:CDS 45.0%
AAAATGTGTGGGGGATACCA+TGG - chr7_1:44318728-44318747 Msa1020600:CDS 45.0%
TGTAGACTATTCGAGTCACG+TGG - chr7_1:44318834-44318853 Msa1020600:CDS 45.0%
GTAGACTATTCGAGTCACGT+GGG - chr7_1:44318835-44318854 Msa1020600:CDS 45.0%
CGTTGGACAAAGAACGCAAA+AGG - chr7_1:44318933-44318952 Msa1020600:CDS 45.0%
TCTGAACAGCGATTCCAATG+GGG - chr7_1:44318962-44318981 Msa1020600:CDS 45.0%
!! TCATACCGCAAGGCATTGTT+TGG - chr7_1:44319262-44319281 Msa1020600:CDS 45.0%
CTTGTGCTAGCATTGCCATT+AGG + chr7_1:44319563-44319582 None:intergenic 45.0%
CCCAATTATGGACTTCATGG+TGG - chr7_1:44319722-44319741 Msa1020600:CDS 45.0%
GCCACCATGAAGTCCATAAT+TGG + chr7_1:44319726-44319745 None:intergenic 45.0%
GCACAAGTCATGAATGTTGC+TGG - chr7_1:44319776-44319795 Msa1020600:CDS 45.0%
CTGCTCAAACTGATTGAAGC+TGG - chr7_1:44319837-44319856 Msa1020600:CDS 45.0%
CGGAGTCCAAACAGTCTTTG+TGG + chr7_1:44317069-44317088 None:intergenic 50.0%
GCGATGCATTAGCAAGTGAC+AGG - chr7_1:44317227-44317246 Msa1020600:three_prime_UTR 50.0%
CCCGAACAAATTGCGAAGCA+AGG - chr7_1:44317494-44317513 Msa1020600:CDS 50.0%
TTTGGGCTGATGGGAGTAGT+AGG - chr7_1:44317911-44317930 Msa1020600:intron 50.0%
GCAGTGGTAACAGATGGAGA+TGG - chr7_1:44318144-44318163 Msa1020600:CDS 50.0%
CATCTCATCGCTTATGTGCC+TGG - chr7_1:44318205-44318224 Msa1020600:CDS 50.0%
CCTTTGCTCTTCACAGTGAC+CGG + chr7_1:44319176-44319195 None:intergenic 50.0%
ACTGGCAAATCAGCTGTCTC+CGG + chr7_1:44319629-44319648 None:intergenic 50.0%
GGTTGCAACACATTCACAGG+AGG + chr7_1:44319668-44319687 None:intergenic 50.0%
CCAGGTTGCAACACATTCAC+AGG + chr7_1:44319671-44319690 None:intergenic 50.0%
CCTGTGAATGTGTTGCAACC+TGG - chr7_1:44319668-44319687 Msa1020600:CDS 50.0%
AACTTCCTGTGTTGGGCTCT+TGG - chr7_1:44319754-44319773 Msa1020600:CDS 50.0%
! CGCAGGTGAGTTGACAACAC+AGG + chr7_1:44318609-44318628 None:intergenic 55.0%
TGCTGGTGCAATACGTCTCG+AGG - chr7_1:44318701-44318720 Msa1020600:CDS 55.0%
CCGGTCACTGTGAAGAGCAA+AGG - chr7_1:44319173-44319192 Msa1020600:CDS 55.0%
TCAGCTGTCTCCGGAATCTC+TGG + chr7_1:44319620-44319639 None:intergenic 55.0%
TTGTGCCAAGAGCCCAACAC+AGG + chr7_1:44319762-44319781 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 44317058 44320149 44317058 ID=Msa1020600;Name=Msa1020600
chr7_1 mRNA 44317058 44320149 44317058 ID=Msa1020600-mRNA-1;Parent=Msa1020600;Name=Msa1020600-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.5|0.66|1|1|1|3|296|862
chr7_1 exon 44317058 44317662 44317058 ID=Msa1020600-mRNA-1:exon:8585;Parent=Msa1020600-mRNA-1
chr7_1 exon 44317742 44317824 44317742 ID=Msa1020600-mRNA-1:exon:8584;Parent=Msa1020600-mRNA-1
chr7_1 exon 44317953 44320149 44317953 ID=Msa1020600-mRNA-1:exon:8583;Parent=Msa1020600-mRNA-1
chr7_1 CDS 44317953 44320149 44317953 ID=Msa1020600-mRNA-1:cds;Parent=Msa1020600-mRNA-1
chr7_1 CDS 44317742 44317824 44317742 ID=Msa1020600-mRNA-1:cds;Parent=Msa1020600-mRNA-1
chr7_1 CDS 44317354 44317662 44317354 ID=Msa1020600-mRNA-1:cds;Parent=Msa1020600-mRNA-1
chr7_1 three_prime_UTR 44317058 44317353 44317058 ID=Msa1020600-mRNA-1:three_prime_utr;Parent=Msa1020600-mRNA-1
Gene Sequence

>Msa1020600

ATGGAACACCACAAAGACTGTTTGGACTCCGATTCCAGTGAAGAAGAATACACAGATGATTTAATAGATGATGAAGAACATCATAGTTCGTCTGATGCTGAAGATGATGTTGATGGTAATGCTGATGATGATGTTCATGATGAATCAGTTCAACAAGAGGGTTCAATCAGCGATGCATTAGCAAGTGACAGGTTTGTGAATGTAAATTCCATTGCCTCTGATGAAATTCTTAAACTTGAATTTGGTACTGTTGATGAAGCGTATGAATTTTATTATCGTTATGGAAAATGCAAAGGTTTTTCCATTAGGAAAGGTGATGTTAGGCGCAATAGTAGTGGAATAATTACAATGAGGCAGTTTGTGTGCAACAAGAATGGGTTAAGAGACAAGAAGCACTTATCTAGGAATGATAGGAAAAGAGATCATAGACGTATCACCCGAACAAATTGCGAAGCAAGGCTTCGTGTGCATTACAAAGCTAAACAAGGGAGATATGTAGTGTCTAGTTTTGTAGAGGGGCATAACCATGAAGTAACCCCACGTAAATTTACACACTTGCACCCACTGTATCGTAAAATTTCTGAAGCAGATAGGGCCCAACTTGATGCTCTTCAATCACATGGAATCAAAACCTGTCATATAATGGGATATATGGTTGCTCAGAAGGGTGGATATACTGATGTAGGTTTTACTAAGAAAGATCTGTATAACTATTTTGATAAAAAGATGCGCGATGTCATTAAAGACGGTGATGTTGCTGCTGCTCTAAAGTATCTTAATGTGAAGTCTTCCACCGATCCAATGTTATATGCTGAATACGATGTCAACAATGATGGAAGAATGAAAAGACTGTTTTGGGCTGATGGGAGTAGTAGGTCTGATTATTTTTGTTTTGGCGACGTTTTGGCGTTTGACACAACGTACAAGAAGAACAAATACAATTATCCGTTGTGTATATTTTCTGGGTGTAACCACCATTCACAGACCATTATATTTGGTGTTGCGTTGTTGGAGGACGAAACAATCGAGTCATATAAGTGGGACTTGAACCGTTTTTTAGAATGTATGGAAAGTAAGTTCCCAAAAGCAGTGGTAACAGATGGAGATGGATCAATGAGGGAAGCTATTAAACAGGTATTCCCTGATGCATCTCATCGCTTATGTGCCTGGCATTTACACAAGAATGCGCAAGAAAATATAAAGAAAACACCATTTCTGGAGGGGTTTAGAAAAGCAATGTACTCAAATTTTACACCGGAGCAATTTGAGGAGTTTTGGTTAGAGTTAATTCAGAAGAATGAACTTGAAGGAAATGCTTGGGTTATCAAGACATATGCGAACAAGTCACTGTGGGCAACCGCATATTTACGTGATAAGTTCTTTGGACGTATTAGAACCACATCTCAATGTGAAGCTATCAATGCAATTGTCAAGACATATTCTAGAGCCAAAGGCAAAATTTTTGAATTTATGCATAATTTTGAACAGGTTTTGGGAGGTTACAGAAACAATGAGCTTGTTGCTGACTTTAAATCAAAATTCACGGAACCTGTGTTGTCAACTCACCTGCGTTTGATTGAGAGTGATGCTGCCAGAATTTACACAGCAGAGATCTTTAAAGAAGTTAAAGATGAAATTATGGATGCTGGTGCAATACGTCTCGAGGACAAAAAATGTGTGGGGGATACCATGGTTTATACATTGGGAAAATATCGTGAGAAAGGCTTTGAAAGAGACGTTGTATACAATGCTACAAGTTTAGAATTTCAGTGTTCGTGTAGACTATTCGAGTCACGTGGGATTCCATGTTGTCATGTCTTTTTTGTGATGAAGGAAGAGGACATTGATCACATACCAGAATGTTTGGTTATGACACGTTGGACAAAGAACGCAAAAGGTGTGTTTCTGAACAGCGATTCCAATGGGGAAATAGATGCTAATATGATTGAACTTGCTCGATTTGGTGCTTACTGTTCTGCTTTTACTACATTCTGTAAAGAAGCCTCAAAAAAGAATGGTGTTTTTAGGGACATAATGGATGAAATTTTGAATCTTCAAAAAAAGTATTGTGATGTTGAAGACTCTACTCAGTCTAAAAGTTATCAGGTAGGTGATCCGGTCACTGTGAAGAGCAAAGGTGCTCCAAAGAAGAAGAAGAACGCAACAAAAAGTGTCAGACACTGTTCAAGATGCAAAAGATACGCACACAACGCTGAACTTCAATATAATGAAGAATTGGTCTCTATCTCTATTGATGATTCTTTACGCCAAAAAGAGAAGAAAAAGAAAAGAAAACCTAATGGCAATGCTAGCACAAGCAAGCAAAAGAAATGTAAAGAGGCAACAAAAATTCCAGAGATTCCGGAGACAGCTGATTTGCCAGTTACAAATGTAGTTCAACCTCCTGTGAATGTGTTGCAACCTGGTAAATTTCCAATGGAAATGCAAGCAATTTACCCCAATTATGGACTTCATGGTGGCGAATCATCAACTTCCTGTGTTGGGCTCTTGGCACAAGTCATGAATGTTGCTGGTTTTGGACAACAACAGTCATCGCAGTCTTGTTTCTACTCTGCTCAAACTGATTGA
Protein sequence

>Msa1020600

MEHHKDCLDSDSSEEEYTDDLIDDEEHHSSSDAEDDVDGNADDDVHDESVQQEGSISDALASDRFVNVNSIASDEILKLEFGTVDEAYEFYYRYGKCKGFSIRKGDVRRNSSGIITMRQFVCNKNGLRDKKHLSRNDRKRDHRRITRTNCEARLRVHYKAKQGRYVVSSFVEGHNHEVTPRKFTHLHPLYRKISEADRAQLDALQSHGIKTCHIMGYMVAQKGGYTDVGFTKKDLYNYFDKKMRDVIKDGDVAAALKYLNVKSSTDPMLYAEYDVNNDGRMKRLFWADGSSRSDYFCFGDVLAFDTTYKKNKYNYPLCIFSGCNHHSQTIIFGVALLEDETIESYKWDLNRFLECMESKFPKAVVTDGDGSMREAIKQVFPDASHRLCAWHLHKNAQENIKKTPFLEGFRKAMYSNFTPEQFEEFWLELIQKNELEGNAWVIKTYANKSLWATAYLRDKFFGRIRTTSQCEAINAIVKTYSRAKGKIFEFMHNFEQVLGGYRNNELVADFKSKFTEPVLSTHLRLIESDAARIYTAEIFKEVKDEIMDAGAIRLEDKKCVGDTMVYTLGKYREKGFERDVVYNATSLEFQCSCRLFESRGIPCCHVFFVMKEEDIDHIPECLVMTRWTKNAKGVFLNSDSNGEIDANMIELARFGAYCSAFTTFCKEASKKNGVFRDIMDEILNLQKKYCDVEDSTQSKSYQVGDPVTVKSKGAPKKKKNATKSVRHCSRCKRYAHNAELQYNEELVSISIDDSLRQKEKKKKRKPNGNASTSKQKKCKEATKIPEIPETADLPVTNVVQPPVNVLQPGKFPMEMQAIYPNYGLHGGESSTSCVGLLAQVMNVAGFGQQQSSQSCFYSAQTD*