AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0629460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0629460 MtrunA17_Chr4g0005831 98.630 876 9 1 1 876 1 873 0.0 1774
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0629460 AT3G09090.1 70.805 870 228 5 33 876 26 895 0.0 1218
Msa0629460 AT3G09090.3 70.554 849 224 5 33 855 26 874 0.0 1181
Msa0629460 AT3G09090.2 68.930 766 212 5 33 772 26 791 0.0 1030

Find 257 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATGAGTAACTACATTTC+TGG 0.170344 4_3:-10318010 None:intergenic
ATTCTTCCATGAGTTATAAA+TGG 0.174312 4_3:-10324601 None:intergenic
GGGTTTCATAAGAACAAATT+AGG 0.174847 4_3:-10317855 None:intergenic
GTTTGGATAAACGGCTTATT+TGG 0.180460 4_3:-10317574 None:intergenic
TCGTCCTCTTTCTTTGATTC+TGG 0.190613 4_3:+10317682 Msa0629460:five_prime_UTR
CCGAAACGTATTATTCTTCT+TGG 0.202481 4_3:-10317954 None:intergenic
ATACAGTAACATGAGATTTA+TGG 0.205856 4_3:+10326040 Msa0629460:three_prime_UTR
CAATCTTCAATCTTTCAATT+TGG 0.207606 4_3:+10317820 Msa0629460:five_prime_UTR
TTTCTACTTCAATTCTAGTT+AGG 0.231201 4_3:+10317772 Msa0629460:five_prime_UTR
ATTCTTGTTGGAACTTCTTA+TGG 0.238062 4_3:+10322950 Msa0629460:CDS
CTTGTTACCTCTTCGTTTGA+TGG 0.250632 4_3:+10324685 Msa0629460:CDS
TCCCAAATCATATCTCCTTT+GGG 0.256362 4_3:-10323700 None:intergenic
TTCCCAAATCATATCTCCTT+TGG 0.267264 4_3:-10323701 None:intergenic
ATAAGAACAAATTAGGGATT+TGG 0.272337 4_3:-10317848 None:intergenic
GAGCCTGAAAAGAAAATAAA+TGG 0.273112 4_3:+10320688 Msa0629460:CDS
AATTCGCGATAGTAGCTTCT+TGG 0.273704 4_3:-10320341 None:intergenic
CTTGTTGTACCAACACTATC+TGG 0.277612 4_3:+10324529 Msa0629460:CDS
GAGCCTGAAAAGAAAGTAAA+TGG 0.282787 4_3:+10320781 Msa0629460:CDS
CAAGAAGAATAATACGTTTC+GGG 0.282960 4_3:+10317955 Msa0629460:CDS
CTTCTTGTTCTTCCAATGCT+TGG 0.288511 4_3:+10325559 Msa0629460:CDS
CCTTGATTGCTGATATTAAC+AGG 0.307509 4_3:+10318189 Msa0629460:CDS
CTTCCAATGCTTGGGATGTT+TGG 0.309012 4_3:+10325568 Msa0629460:CDS
TTGGTATGTGGGTTTGAATA+AGG 0.317504 4_3:+10320272 Msa0629460:CDS
TTCTTGTTCTTCCAATGCTT+GGG 0.326042 4_3:+10325560 Msa0629460:CDS
TCTGATTACACTACACATAA+AGG 0.333065 4_3:-10325872 None:intergenic
CTGGAAGATAACAACTTAAA+AGG 0.334616 4_3:+10320919 Msa0629460:CDS
TTTCCACAGGCTCCAACTAT+TGG 0.335598 4_3:+10324478 Msa0629460:intron
CTCTCTCCTTGGTAATTGCC+AGG 0.340762 4_3:-10325358 None:intergenic
CTTGGATGGTGATGGGTATC+TGG 0.342824 4_3:+10322925 Msa0629460:CDS
CCAGGAGCATATGAAAGAAT+TGG 0.347380 4_3:+10322754 Msa0629460:CDS
GTTGTATTGTTAACTAGTTT+TGG 0.348377 4_3:+10325985 Msa0629460:three_prime_UTR
ACAATTTATAGTAGTGCATA+TGG 0.353288 4_3:-10325528 None:intergenic
GCTTTATTGTTCTCTCTCCT+TGG 0.354570 4_3:-10325369 None:intergenic
AGAATCATTTGTTCAAGCTT+TGG 0.360643 4_3:+10325791 Msa0629460:three_prime_UTR
AAGGGCAAAATTCCAATATC+AGG 0.365226 4_3:-10325853 None:intergenic
AGGGAAGCATGAGAAATTAG+AGG 0.366054 4_3:+10321140 Msa0629460:CDS
GTGAAGCGATGGGTGCTCTT+TGG 0.369216 4_3:-10317720 None:intergenic
ATGTTTACCAGGCTGATAAT+AGG 0.371318 4_3:-10325401 None:intergenic
TTCTACTTCAATTCTAGTTA+GGG 0.371411 4_3:+10317773 Msa0629460:five_prime_UTR
TTGCAACATTATTTCTTCCT+TGG 0.372211 4_3:-10325078 None:intergenic
TTAGGGTATGTTTGGATAAA+CGG 0.375204 4_3:-10317583 None:intergenic
GGTTTCATAAGAACAAATTA+GGG 0.375819 4_3:-10317854 None:intergenic
ATGAACTTCTTCCTTACCTT+TGG 0.376972 4_3:-10320965 None:intergenic
GGGAAGATTCATGTTCTTGA+TGG 0.378492 4_3:+10324550 Msa0629460:CDS
AGTGAATGAGATCCTGATAT+TGG 0.378778 4_3:+10325841 Msa0629460:three_prime_UTR
ATAAAATAAAATTGAGTGTT+GGG 0.379310 4_3:+10317612 Msa0629460:five_prime_UTR
CCAAGAAGAATAATACGTTT+CGG 0.380774 4_3:+10317954 Msa0629460:CDS
ACATTATTTCTTCCTTGGTT+AGG 0.389436 4_3:-10325073 None:intergenic
AAATAGCACTTCACCATTGT+AGG 0.390827 4_3:-10320085 None:intergenic
TCTTAATACCCTCCTCTGAT+TGG 0.392334 4_3:-10320807 None:intergenic
GGTTATTTGTACCTCATTGA+TGG 0.398016 4_3:+10324706 Msa0629460:CDS
AAGGACCACAGGAACAGTTT+TGG 0.401580 4_3:+10325450 Msa0629460:CDS
CCTGTTAATATCAGCAATCA+AGG 0.401995 4_3:-10318189 None:intergenic
TAGCATTGGGAGGCGGCTGC+TGG 0.404393 4_3:+10320900 Msa0629460:CDS
CCTGAGCTCAATGGTGTGCC+TGG 0.404708 4_3:-10325681 None:intergenic
TGTTAATACTCTCCTCTGAT+TGG 0.405891 4_3:-10320714 None:intergenic
GAAAATGATGGCAATGGCAC+TGG 0.417978 4_3:-10325619 None:intergenic
TTCTTCCATGAGTTATAAAT+GGG 0.418307 4_3:-10324600 None:intergenic
GCAATGGCACTGGGCCTTGT+GGG 0.420539 4_3:-10325609 None:intergenic
GGAAGGGATGGATCACCTAT+TGG 0.420696 4_3:+10324571 Msa0629460:CDS
ATTTGTTCAAGCTTTGGTTC+AGG 0.421642 4_3:+10325797 Msa0629460:three_prime_UTR
TTCTCCAACTGTTGTAGACT+TGG 0.422387 4_3:+10322907 Msa0629460:CDS
TTATGAGTAACTACATTTCT+GGG 0.425505 4_3:-10318009 None:intergenic
CAGACTTCCTTGCTTGTCCC+TGG 0.428768 4_3:+10325340 Msa0629460:intron
AGAAAGAGGACGACACCAAT+TGG 0.429768 4_3:-10317672 None:intergenic
TAACTAGAATTGAAGTAGAA+AGG 0.430624 4_3:-10317770 None:intergenic
TTCAAGGTAGTGAACAAAAG+AGG 0.437265 4_3:-10318665 None:intergenic
TAAACAGAAGGAAAAGAAGA+AGG 0.440987 4_3:+10324654 Msa0629460:CDS
CCAATTCTTTCATATGCTCC+TGG 0.441892 4_3:-10322754 None:intergenic
TTTGTTCAAGCTTTGGTTCA+GGG 0.443656 4_3:+10325798 Msa0629460:three_prime_UTR
GGTATCCTCCTCTGCGAAAA+CGG 0.450234 4_3:-10317933 None:intergenic
AGCTGCCAACTGTGGGAGTA+AGG 0.450842 4_3:+10325431 Msa0629460:CDS
ATGCAGATATAGCATGGTCT+TGG 0.451107 4_3:+10324867 Msa0629460:intron
CACTACCTTGAAGTTCTTGA+GGG 0.452249 4_3:+10318676 Msa0629460:CDS
TACCAGGCTGATAATAGGTC+TGG 0.454949 4_3:-10325396 None:intergenic
TCAGGATGGGTACGGTCCAC+TGG 0.455155 4_3:-10320297 None:intergenic
GGCAATGGCACTGGGCCTTG+TGG 0.456896 4_3:-10325610 None:intergenic
AACTAGAATTGAAGTAGAAA+GGG 0.458087 4_3:-10317769 None:intergenic
GACATTGGGAAATATGTTGC+TGG 0.458768 4_3:+10322785 Msa0629460:CDS
AGAGAAGTTCCCTCTTGAAA+TGG 0.464654 4_3:+10323579 Msa0629460:CDS
CAGGAGCATATGAAAGAATT+GGG 0.467533 4_3:+10322755 Msa0629460:CDS
CCCAAATCATATCTCCTTTG+GGG 0.469336 4_3:-10323699 None:intergenic
CCCCAAAGGAGATATGATTT+GGG 0.470564 4_3:+10323699 Msa0629460:CDS
ATAAATGGGTACCGTCCAAT+AGG 0.470788 4_3:-10324586 None:intergenic
CTGATTACACTACACATAAA+GGG 0.470881 4_3:-10325871 None:intergenic
TCTATGTAACTCATCCTTCA+AGG 0.472281 4_3:+10325122 Msa0629460:CDS
AATAAAATAAAATTGAGTGT+TGG 0.472361 4_3:+10317611 Msa0629460:five_prime_UTR
AGTTGGTCATCATGAACATC+AGG 0.476688 4_3:-10320315 None:intergenic
CAACTATTGGTGATATCGAC+GGG 0.476817 4_3:+10324491 Msa0629460:CDS
AGCTTAATTCGATGTTTACC+AGG 0.476834 4_3:-10325412 None:intergenic
TTGAAAATATCCTACCTTGA+GGG 0.477548 4_3:-10324983 None:intergenic
CGGTACCCATTTATAACTCA+TGG 0.479180 4_3:+10324595 Msa0629460:CDS
TTTGGTTCAGGGATAGTTGA+GGG 0.479347 4_3:+10325809 Msa0629460:three_prime_UTR
ACATCAAATTGAGTTATCCC+TGG 0.479391 4_3:+10325722 Msa0629460:three_prime_UTR
GTTTAGAGATGAAGATGCTT+TGG 0.482215 4_3:+10318094 Msa0629460:intron
CTGTGAATTTAGAGCTAAGA+TGG 0.484697 4_3:+10318132 Msa0629460:CDS
CGGTGCCCTCAAGAACTTCA+AGG 0.486346 4_3:-10318681 None:intergenic
ATTCTCCTTGTAGAAATGAA+TGG 0.488587 4_3:+10320589 Msa0629460:intron
TCATCACGGAAAGCCCTTGA+AGG 0.491356 4_3:-10325136 None:intergenic
TACCTCATTGATGGACCTAC+AGG 0.491627 4_3:+10324715 Msa0629460:CDS
CAATGATGGCGTAATGGAAA+TGG 0.491754 4_3:+10321331 Msa0629460:CDS
AATTGGGCGATATTGACATT+GGG 0.493358 4_3:+10322771 Msa0629460:CDS
ATCTGTCAGTGCTGGTTCTG+TGG 0.497253 4_3:+10320852 Msa0629460:CDS
CATTGTGGGGTGATGAAGAA+TGG 0.497821 4_3:+10321112 Msa0629460:CDS
CATCTTAGCTCTAAATTCAC+AGG 0.499015 4_3:-10318131 None:intergenic
GCAGACAACAAGACTAGCAT+TGG 0.499136 4_3:+10320886 Msa0629460:CDS
GAAGAAATAATGTTGCAAAT+CGG 0.499551 4_3:+10325083 Msa0629460:CDS
GATGATCTAACACATAGAAT+AGG 0.499933 4_3:-10322973 None:intergenic
TTCACATTTCCTGAGCTCAA+TGG 0.500529 4_3:-10325690 None:intergenic
GATAATTATAGATACCCATC+TGG 0.503686 4_3:+10325196 Msa0629460:CDS
AAACAGAAGGAAAAGAAGAA+GGG 0.505045 4_3:+10324655 Msa0629460:CDS
ACCGATGGAGACAAAATGCC+AGG 0.507801 4_3:+10318700 Msa0629460:CDS
CAAAGCTCACTGCGGCACCC+AGG 0.508968 4_3:-10325740 None:intergenic
CTGATTGTCTCGACAATGAA+TGG 0.509054 4_3:+10324922 Msa0629460:CDS
CATCAAATTGAGTTATCCCT+GGG 0.511777 4_3:+10325723 Msa0629460:three_prime_UTR
GGTGATGAAGAATGGATTGA+AGG 0.513551 4_3:+10321120 Msa0629460:CDS
CATGTTCTTGATGGAAGGGA+TGG 0.519262 4_3:+10324559 Msa0629460:CDS
CTTGTCATCCTTCGCCCACA+AGG 0.519562 4_3:+10325595 Msa0629460:CDS
GGGTATCTGGACATTCTTGT+TGG 0.523031 4_3:+10322938 Msa0629460:CDS
AGATTCATGTTCTTGATGGA+AGG 0.524196 4_3:+10324554 Msa0629460:CDS
TTTAGAGCTAAGATGGCAAA+CGG 0.525130 4_3:+10318139 Msa0629460:CDS
AACTCTTTCCTTCCTCATCA+CGG 0.525602 4_3:-10325150 None:intergenic
GATAATTCATCTGTCAGTGC+TGG 0.526433 4_3:+10320844 Msa0629460:CDS
CAAACCAGAATCAAAGAAAG+AGG 0.526919 4_3:-10317686 None:intergenic
TGAAAATATCCTACCTTGAG+GGG 0.528195 4_3:-10324982 None:intergenic
ACTACTATAAATTGTTGAAG+TGG 0.530048 4_3:+10325536 Msa0629460:CDS
CCAAATCATATCTCCTTTGG+GGG 0.530327 4_3:-10323698 None:intergenic
GAATTGGGCGATATTGACAT+TGG 0.530810 4_3:+10322770 Msa0629460:CDS
GCAGCTGATATTAATGATGA+TGG 0.531122 4_3:+10323625 Msa0629460:CDS
TCTCTCCTTGGTAATTGCCA+GGG 0.532602 4_3:-10325357 None:intergenic
TATTGACAATGATGGCGTAA+TGG 0.532605 4_3:+10321325 Msa0629460:CDS
TCGAATTAAGCTGCCAACTG+TGG 0.533264 4_3:+10325423 Msa0629460:CDS
TCACTACCTTGAAGTTCTTG+AGG 0.536008 4_3:+10318675 Msa0629460:CDS
TCGTTGTTCCTTGAAAATGA+TGG 0.536141 4_3:-10325631 None:intergenic
TGGGTAACCGAGTGCATCAT+CGG 0.536831 4_3:-10317990 None:intergenic
TGTGGAAAATGAGGAAGGAC+TGG 0.538615 4_3:+10320996 Msa0629460:CDS
TGTTGATTTAAGTAAACAGA+AGG 0.539500 4_3:+10324642 Msa0629460:CDS
TGGCGTGAGAGAAATAGCTT+TGG 0.539702 4_3:+10320059 Msa0629460:CDS
TCCATGCAACAACATTTCCA+TGG 0.540039 4_3:-10323675 None:intergenic
TGATGGGAAGCTTGACATAG+TGG 0.541378 4_3:+10318639 Msa0629460:CDS
CCATCCAAGTCTACAACAGT+TGG 0.542560 4_3:-10322911 None:intergenic
CCAGGCACACCATTGAGCTC+AGG 0.544197 4_3:+10325681 Msa0629460:three_prime_UTR
AGAAGTTCATGCTGCAACTG+TGG 0.544496 4_3:+10320978 Msa0629460:CDS
TTCAAGGGCTTTCCGTGATG+AGG 0.545086 4_3:+10325138 Msa0629460:CDS
ATTGCAGATATTGACAATGA+TGG 0.545159 4_3:+10321317 Msa0629460:CDS
AATATCCTACCTTGAGGGGA+TGG 0.546249 4_3:-10324978 None:intergenic
CCGTCGATATCACCAATAGT+TGG 0.547051 4_3:-10324490 None:intergenic
GAAGTTCTTGAGGGCACCGA+TGG 0.547844 4_3:+10318685 Msa0629460:CDS
GACTAGAATGCACAGTCGAT+TGG 0.548673 4_3:-10320011 None:intergenic
GCACTGGGCCTTGTGGGCGA+AGG 0.550344 4_3:-10325603 None:intergenic
TTCTGTTGATGTGGAAGCTG+AGG 0.550577 4_3:-10320632 None:intergenic
GATCTGAGTGTGTGAAGCGA+TGG 0.550747 4_3:-10317731 None:intergenic
ACAGTCGATTGGTGGAAAGC+AGG 0.553340 4_3:-10320000 None:intergenic
GTCTTGGCAGACAATGTAGA+TGG 0.554460 4_3:+10324883 Msa0629460:CDS
AACAACACCTGCTTGAATCT+CGG 0.554490 4_3:-10323602 None:intergenic
AACCAGACCTATTATCAGCC+TGG 0.554997 4_3:+10325394 Msa0629460:CDS
TGCTGCAACTGTGGAAAATG+AGG 0.555327 4_3:+10320987 Msa0629460:CDS
TTGTTGTACCAACACTATCT+GGG 0.556727 4_3:+10324530 Msa0629460:CDS
GATTCATGTTCTTGATGGAA+GGG 0.557088 4_3:+10324555 Msa0629460:CDS
TGGTTCTGAATCCAAAGGTA+AGG 0.557327 4_3:+10320954 Msa0629460:CDS
TTATGTTGATGAATCATTGT+GGG 0.557727 4_3:+10321098 Msa0629460:CDS
TAGTAGCTTCTTGGACAAGT+TGG 0.558204 4_3:-10320332 None:intergenic
CCAACTGTTGTAGACTTGGA+TGG 0.558571 4_3:+10322911 Msa0629460:CDS
TTCTATGTGTTAGATCATCA+TGG 0.558711 4_3:+10322977 Msa0629460:CDS
CGAATTAAGCTGCCAACTGT+GGG 0.559486 4_3:+10325424 Msa0629460:CDS
CTTGTCTGACATGATATAGC+CGG 0.560084 4_3:-10320217 None:intergenic
TTGAGGGGATGGTGAGGTGA+GGG 0.560431 4_3:-10324967 None:intergenic
CATAGTTGTACTCATCAGCC+AGG 0.561836 4_3:-10321065 None:intergenic
TGGCAGACAATGTAGATGGT+GGG 0.562085 4_3:+10324887 Msa0629460:CDS
AGATACCCATCTGGTCATCA+AGG 0.562292 4_3:+10325205 Msa0629460:CDS
CATCAAACGAAGAGGTAACA+AGG 0.562691 4_3:-10324684 None:intergenic
AGGGTGACTTTCTGTTGATG+TGG 0.570303 4_3:-10320641 None:intergenic
ATTATGTTGATGAATCATTG+TGG 0.571019 4_3:+10321097 Msa0629460:CDS
TTGTCTATGTCATATAGAAG+TGG 0.571149 4_3:-10320033 None:intergenic
TGTGCTGATGTTGTTGACAT+TGG 0.572184 4_3:+10324739 Msa0629460:CDS
CTTTGATCACGTAGTCAAAG+TGG 0.572192 4_3:+10325758 Msa0629460:three_prime_UTR
ATCTGAGTGTGTGAAGCGAT+GGG 0.572297 4_3:-10317730 None:intergenic
TAGAATGCACAGTCGATTGG+TGG 0.572725 4_3:-10320008 None:intergenic
CAGACAACAAGACTAGCATT+GGG 0.573562 4_3:+10320887 Msa0629460:CDS
AAAATGATGGCAATGGCACT+GGG 0.576438 4_3:-10325618 None:intergenic
CTTTGGTTCAGGGATAGTTG+AGG 0.576905 4_3:+10325808 Msa0629460:three_prime_UTR
GTGATGAAGAATGGATTGAA+GGG 0.577077 4_3:+10321121 Msa0629460:CDS
GAACTTACAGTGACATGGTA+TGG 0.578989 4_3:-10325229 None:intergenic
ACACCAAACATCCCAAGCAT+TGG 0.580558 4_3:-10325571 None:intergenic
GATGAATTATCAGCAACTGT+TGG 0.581842 4_3:-10320832 None:intergenic
TTAAAAGGAGCTGAGCAAGT+TGG 0.583630 4_3:+10320934 Msa0629460:CDS
AGGGCTTTCCGTGATGAGGA+AGG 0.583864 4_3:+10325142 Msa0629460:CDS
ATCGCTTCACACACTCAGAT+CGG 0.584256 4_3:+10317733 Msa0629460:five_prime_UTR
TGAATCTCGGCCATTTCAAG+AGG 0.584486 4_3:-10323589 None:intergenic
CCAACTATTGGTGATATCGA+CGG 0.586361 4_3:+10324490 Msa0629460:CDS
CTAGTTACTGCTGATACCCA+TGG 0.586395 4_3:+10323658 Msa0629460:CDS
CTATATGACATAGACAAAGA+TGG 0.586706 4_3:+10320039 Msa0629460:CDS
GTGGTCCTTACTCCCACAGT+TGG 0.587468 4_3:-10325436 None:intergenic
CTCGACCAAAACTGTTCCTG+TGG 0.591060 4_3:-10325455 None:intergenic
TCAAGGTAGTGAACAAAAGA+GGG 0.591437 4_3:-10318664 None:intergenic
ATTGGTGATATCGACGGGGA+TGG 0.591949 4_3:+10324496 Msa0629460:CDS
AAAGCTCACTGCGGCACCCA+GGG 0.595695 4_3:-10325739 None:intergenic
ATAGCTTTGGCAACCTACAA+TGG 0.596273 4_3:+10320072 Msa0629460:CDS
CCATGCAACAACATTTCCAT+GGG 0.597707 4_3:-10323674 None:intergenic
AGTAAATGGAAGCCAATCAG+AGG 0.598162 4_3:+10320795 Msa0629460:CDS
CTATGTAACTCATCCTTCAA+GGG 0.598298 4_3:+10325123 Msa0629460:CDS
CTTGAGGGGATGGTGAGGTG+AGG 0.598439 4_3:-10324968 None:intergenic
GTTGTAGACTTGGATGGTGA+TGG 0.598690 4_3:+10322917 Msa0629460:CDS
GGTCATCATGAACATCAGGA+TGG 0.599779 4_3:-10320311 None:intergenic
GAGAAGAATATACGTACGCT+CGG 0.600163 4_3:-10322889 None:intergenic
CATGAACATCAGGATGGGTA+CGG 0.601250 4_3:-10320305 None:intergenic
GCAAATCGGTACGGTCGTGA+AGG 0.603856 4_3:+10325097 Msa0629460:CDS
AAATGGAAGCCAATCAGAGG+AGG 0.604090 4_3:+10320798 Msa0629460:CDS
ACTGTGGGAGTAAGGACCAC+AGG 0.604153 4_3:+10325439 Msa0629460:CDS
CTGAGGAATTAACTTCGTGT+CGG 0.604187 4_3:-10320615 None:intergenic
TTGGCAGACAATGTAGATGG+TGG 0.604254 4_3:+10324886 Msa0629460:CDS
CCCATGGAAATGTTGTTGCA+TGG 0.605735 4_3:+10323674 Msa0629460:CDS
CTCACCTCACCATCCCCTCA+AGG 0.605790 4_3:+10324969 Msa0629460:CDS
TGGACACAAAACAAGTCAAG+TGG 0.612073 4_3:+10322828 Msa0629460:CDS
ATTCCGCAATAGTGATGACC+TGG 0.612503 4_3:+10321047 Msa0629460:CDS
TTGGTTTCAACTTTACGATG+TGG 0.614299 4_3:+10326004 Msa0629460:three_prime_UTR
GAAATGGCCGAGATTCAAGC+AGG 0.614578 4_3:+10323595 Msa0629460:CDS
GTCATCATGAACATCAGGAT+GGG 0.614968 4_3:-10320310 None:intergenic
TTCCTTGAAAATGATGGCAA+TGG 0.615790 4_3:-10325625 None:intergenic
ACAAGACTAGCATTGGGAGG+CGG 0.615861 4_3:+10320893 Msa0629460:CDS
CTGTTAATATCAGCAATCAA+GGG 0.618771 4_3:-10318188 None:intergenic
CAGCCAGGTCATCACTATTG+CGG 0.618967 4_3:-10321050 None:intergenic
GCAACTGTGGAAAATGAGGA+AGG 0.620753 4_3:+10320991 Msa0629460:CDS
TTGGTACAACAAGCTCAGTA+CGG 0.621516 4_3:-10324519 None:intergenic
CTTGTCCCTGGCAATTACCA+AGG 0.622404 4_3:+10325352 Msa0629460:CDS
TTGTAGACTTGGATGGTGAT+GGG 0.625613 4_3:+10322918 Msa0629460:CDS
CAAATAACCATCAAACGAAG+AGG 0.628486 4_3:-10324692 None:intergenic
AATAATGTTGCAAATCGGTA+CGG 0.629908 4_3:+10325088 Msa0629460:CDS
TATGGTCCTTGATGACCAGA+TGG 0.631810 4_3:-10325211 None:intergenic
AATAAATGGAAGCCAATCAG+AGG 0.633557 4_3:+10320702 Msa0629460:CDS
GGCAGACAATGTAGATGGTG+GGG 0.633931 4_3:+10324888 Msa0629460:CDS
GGGTTTGAATAAGGATCCAG+TGG 0.638731 4_3:+10320281 Msa0629460:CDS
TGAATCTTCCCAGATAGTGT+TGG 0.640555 4_3:-10324538 None:intergenic
GGGATGGATCACCTATTGGA+CGG 0.641758 4_3:+10324575 Msa0629460:CDS
GTAATTGCCAGGGACAAGCA+AGG 0.643916 4_3:-10325347 None:intergenic
CCTACCTTGAGGGGATGGTG+AGG 0.643978 4_3:-10324973 None:intergenic
GATGGGAACTTACAGTGACA+TGG 0.645843 4_3:-10325234 None:intergenic
GAATCTCGGCCATTTCAAGA+GGG 0.650459 4_3:-10323588 None:intergenic
CAAGTTGGTTCTGAATCCAA+AGG 0.652708 4_3:+10320949 Msa0629460:CDS
AGCCTGTAGGTCCATCAATG+AGG 0.655462 4_3:-10324717 None:intergenic
GTAGGAGGAACTAACAGGTG+TGG 0.657581 4_3:-10321193 None:intergenic
GCATGGAGATTGCCTAACCA+AGG 0.658526 4_3:+10325061 Msa0629460:CDS
AATGGAAGCCAATCAGAGGA+GGG 0.664074 4_3:+10320799 Msa0629460:CDS
GAAGCCACCGATGATGCACT+CGG 0.670739 4_3:+10317983 Msa0629460:CDS
TGACAGGTATTATGACAACC+AGG 0.671120 4_3:+10322736 Msa0629460:intron
TATGTTGATGAATCATTGTG+GGG 0.671873 4_3:+10321099 Msa0629460:CDS
ATGGTCCTTGATGACCAGAT+GGG 0.674700 4_3:-10325210 None:intergenic
TATCATGTCAGACAAGCTTG+AGG 0.681103 4_3:+10320224 Msa0629460:CDS
ACAACATCAGCACAGCCTGT+AGG 0.681376 4_3:-10324730 None:intergenic
ACAACAAGACTAGCATTGGG+AGG 0.681724 4_3:+10320890 Msa0629460:CDS
GTAACCGAGTGCATCATCGG+TGG 0.682988 4_3:-10317987 None:intergenic
ATCCTCCTCTGCGAAAACGG+AGG 0.685152 4_3:-10317930 None:intergenic
ATCAAACGAAGAGGTAACAA+GGG 0.688966 4_3:-10324683 None:intergenic
AACTATTGGTGATATCGACG+GGG 0.720915 4_3:+10324492 Msa0629460:CDS
ATTGGGAAATATGTTGCTGG+TGG 0.740662 4_3:+10322788 Msa0629460:CDS
TACGTGATCAAAGCTCACTG+CGG 0.755579 4_3:-10325748 None:intergenic
ACAAGCTTGAGGTCCCACGT+AGG 0.760693 4_3:+10320235 Msa0629460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATAAAATAAAATTAAA+AGG - chr4_3:10321220-10321239 None:intergenic 0.0%
!!! TTTTATTTTATTTTTGGTTA+GGG - chr4_3:10317603-10317622 None:intergenic 10.0%
!!! ATTTTATTTTATTTTTGGTT+AGG - chr4_3:10317604-10317623 None:intergenic 10.0%
!!! ACTCAATTTTATTTTATTTT+TGG - chr4_3:10317609-10317628 None:intergenic 10.0%
!!! TAATTTTCTCAAATTATTAT+CGG - chr4_3:10318276-10318295 None:intergenic 10.0%
!!! TTGAAATTTTTAGTAAATAT+TGG - chr4_3:10319041-10319060 None:intergenic 10.0%
!!! TATTTTTATTAGCATATTTA+GGG - chr4_3:10319532-10319551 None:intergenic 10.0%
!!! TTAATAATATTTTCTATAAG+AGG + chr4_3:10322145-10322164 Msa0629460:intron 10.0%
!!! AATCAAATATATATTTTCTT+TGG + chr4_3:10323506-10323525 Msa0629460:intron 10.0%
!! AATAAAATAAAATTGAGTGT+TGG + chr4_3:10317611-10317630 Msa0629460:five_prime_UTR 15.0%
!! ATAAAATAAAATTGAGTGTT+GGG + chr4_3:10317612-10317631 Msa0629460:five_prime_UTR 15.0%
!!! ATCATTAATACTTTTTTGAA+GGG - chr4_3:10318448-10318467 None:intergenic 15.0%
!!! TATCATTAATACTTTTTTGA+AGG - chr4_3:10318449-10318468 None:intergenic 15.0%
!! AAGTATTAATGATAAAGTTA+AGG + chr4_3:10318455-10318474 Msa0629460:intron 15.0%
!! AGTATTAATGATAAAGTTAA+GGG + chr4_3:10318456-10318475 Msa0629460:intron 15.0%
!!! GTATTTTTATTAGCATATTT+AGG - chr4_3:10319533-10319552 None:intergenic 15.0%
!!! TACAATGATTTTTCATTTTT+AGG + chr4_3:10320190-10320209 Msa0629460:intron 15.0%
!!! ACAATGATTTTTCATTTTTA+GGG + chr4_3:10320191-10320210 Msa0629460:intron 15.0%
!!! ATCTAATCTAATTTTATCTT+TGG + chr4_3:10320560-10320579 Msa0629460:intron 15.0%
!!! TCTAATCTAATTTTATCTTT+GGG + chr4_3:10320561-10320580 Msa0629460:intron 15.0%
!!! AAAATAAAATTAAAAGGTGT+AGG - chr4_3:10321214-10321233 None:intergenic 15.0%
!!! ATATGATTTTTGACAATTAT+TGG + chr4_3:10322651-10322670 Msa0629460:intron 15.0%
!!! TTTTAAGTTATTTTGTATAG+AGG + chr4_3:10323198-10323217 Msa0629460:intron 15.0%
!! GCATAAATAAAATTCTAATA+GGG - chr4_3:10323281-10323300 None:intergenic 15.0%
!! AGCATAAATAAAATTCTAAT+AGG - chr4_3:10323282-10323301 None:intergenic 15.0%
!!! TTTTTTTTTATAAGCTCAAT+TGG + chr4_3:10323395-10323414 Msa0629460:intron 15.0%
!!! TTTTTTTTATAAGCTCAATT+GGG + chr4_3:10323396-10323415 Msa0629460:intron 15.0%
!! TTATGATTCACAAAAAAAAA+AGG - chr4_3:10323423-10323442 None:intergenic 15.0%
!!! TTTTTTTGTGAATCATAATT+AGG + chr4_3:10323425-10323444 Msa0629460:intron 15.0%
!!! TTTTTTGTGAATCATAATTA+GGG + chr4_3:10323426-10323445 Msa0629460:intron 15.0%
!!! GTTTAATAGCATTTTTAAAT+TGG + chr4_3:10323855-10323874 Msa0629460:intron 15.0%
!!! AAAATCGATTTATAAGATTA+GGG + chr4_3:10323930-10323949 Msa0629460:intron 15.0%
!!! AAGAAAAAGAAGAACTTTTT+TGG - chr4_3:10317888-10317907 None:intergenic 20.0%
!!! TTTAGTTTTGAGTTTTTGAT+TGG + chr4_3:10318058-10318077 Msa0629460:intron 20.0%
!!! AAAACAGTGAATTGATTTTA+TGG - chr4_3:10318345-10318364 None:intergenic 20.0%
!!! AATTCACTGTTTTGAATATA+GGG + chr4_3:10318352-10318371 Msa0629460:intron 20.0%
!!! ACATCAATTGTTTTGAAATA+AGG + chr4_3:10318392-10318411 Msa0629460:intron 20.0%
!!! CATCAATTGTTTTGAAATAA+GGG + chr4_3:10318393-10318412 Msa0629460:intron 20.0%
!!! TGGTATATGTATACATTTTT+AGG + chr4_3:10318484-10318503 Msa0629460:intron 20.0%
!!! TTTTTGTTGTAGCTATATTT+TGG + chr4_3:10318807-10318826 Msa0629460:intron 20.0%
!! GTTGTGATATATATAAAGAA+GGG + chr4_3:10319394-10319413 Msa0629460:intron 20.0%
!! TTGTGATATATATAAAGAAG+GGG + chr4_3:10319395-10319414 Msa0629460:intron 20.0%
!! AAATACCAGTTTCTATTAAT+TGG + chr4_3:10319547-10319566 Msa0629460:intron 20.0%
!!! ATTCTTGTTTTTTTTTGAGA+GGG - chr4_3:10319661-10319680 None:intergenic 20.0%
!! TCAAAAAAAAACAAGAATGA+AGG + chr4_3:10319663-10319682 Msa0629460:intron 20.0%
!! TTGTAAATGGAAGAAAAATT+TGG - chr4_3:10320134-10320153 None:intergenic 20.0%
!! GTGTAGATAATGAAAATATA+AGG - chr4_3:10320438-10320457 None:intergenic 20.0%
!! AATTTACAGTTTATCAATTC+TGG + chr4_3:10321237-10321256 Msa0629460:intron 20.0%
!! AAGTTGAGCTTAAAAAATAT+TGG + chr4_3:10321651-10321670 Msa0629460:intron 20.0%
!! ATTAAAAACAGATGAAAGAA+AGG + chr4_3:10321770-10321789 Msa0629460:intron 20.0%
!!! TTTTCTTTTTTTGGTTGAAT+TGG + chr4_3:10321874-10321893 Msa0629460:intron 20.0%
!!! AGAAATTTTTTTAGAGAACT+GGG - chr4_3:10321902-10321921 None:intergenic 20.0%
!! GTCTTCAATGAAAAAATAAA+AGG + chr4_3:10322402-10322421 Msa0629460:intron 20.0%
!! CTTTAAATAAAATACTTCAC+TGG - chr4_3:10322514-10322533 None:intergenic 20.0%
!! CATCAAAAAATTTCAAAAAC+AGG - chr4_3:10322590-10322609 None:intergenic 20.0%
!!! TTGAAATTTTTTGATGCATT+AGG + chr4_3:10322594-10322613 Msa0629460:intron 20.0%
!!! TTTTTTAATATGCTTCTATG+AGG + chr4_3:10323048-10323067 Msa0629460:intron 20.0%
!! CTTAAAACAGTAAATTGTAA+TGG - chr4_3:10323185-10323204 None:intergenic 20.0%
!!! ATTGATAATGATGAAACTTA+GGG - chr4_3:10323230-10323249 None:intergenic 20.0%
!!! TATTGATAATGATGAAACTT+AGG - chr4_3:10323231-10323250 None:intergenic 20.0%
!!! TTTTTTTATAAGCTCAATTG+GGG + chr4_3:10323397-10323416 Msa0629460:intron 20.0%
!!! TTTTTGTGAATCATAATTAG+GGG + chr4_3:10323427-10323446 Msa0629460:intron 20.0%
!!! TTTTTTTTTCTTCCTCAAAT+AGG + chr4_3:10323547-10323566 Msa0629460:intron 20.0%
!!! ATAGCATTTTTAAATTGGTT+TGG + chr4_3:10323860-10323879 Msa0629460:intron 20.0%
!!! TAGCATTTTTAAATTGGTTT+GGG + chr4_3:10323861-10323880 Msa0629460:intron 20.0%
!!! ATCTTATAAATCGATTTTGT+AGG - chr4_3:10323928-10323947 None:intergenic 20.0%
!!! CAAAATCGATTTATAAGATT+AGG + chr4_3:10323929-10323948 Msa0629460:intron 20.0%
!! TAAAATTATTATTTAAGCCC+TGG - chr4_3:10324094-10324113 None:intergenic 20.0%
!! AACAGAATTAAAATGAAAAC+TGG - chr4_3:10324227-10324246 None:intergenic 20.0%
! AACTAGAATTGAAGTAGAAA+GGG - chr4_3:10317772-10317791 None:intergenic 25.0%
! TAACTAGAATTGAAGTAGAA+AGG - chr4_3:10317773-10317792 None:intergenic 25.0%
!! TTTCTACTTCAATTCTAGTT+AGG + chr4_3:10317772-10317791 Msa0629460:five_prime_UTR 25.0%
!! TTCTACTTCAATTCTAGTTA+GGG + chr4_3:10317773-10317792 Msa0629460:five_prime_UTR 25.0%
! CAATCTTCAATCTTTCAATT+TGG + chr4_3:10317820-10317839 Msa0629460:five_prime_UTR 25.0%
! ATAAGAACAAATTAGGGATT+TGG - chr4_3:10317851-10317870 None:intergenic 25.0%
! GGTTTCATAAGAACAAATTA+GGG - chr4_3:10317857-10317876 None:intergenic 25.0%
!!! AGAACTTTTTTGGATGAAAA+GGG - chr4_3:10317878-10317897 None:intergenic 25.0%
!!! AAGAACTTTTTTGGATGAAA+AGG - chr4_3:10317879-10317898 None:intergenic 25.0%
! TTATGAGTAACTACATTTCT+GGG - chr4_3:10318012-10318031 None:intergenic 25.0%
! ATTATGAGTAACTACATTTC+TGG - chr4_3:10318013-10318032 None:intergenic 25.0%
! TTGTGTATTTGTTTGTCTAA+TGG + chr4_3:10318228-10318247 Msa0629460:intron 25.0%
!!! CAATTCACTGTTTTGAATAT+AGG + chr4_3:10318351-10318370 Msa0629460:intron 25.0%
!!! TGATAAAGTTAAGGGTATTT+TGG + chr4_3:10318464-10318483 Msa0629460:intron 25.0%
!!! TTCTTTTCTTTGGTAGTTTA+AGG - chr4_3:10318539-10318558 None:intergenic 25.0%
! TACCAAAGAAAAGAAATGTA+GGG + chr4_3:10318544-10318563 Msa0629460:intron 25.0%
!!! AAATCACTGCAATTTTGTTT+TGG + chr4_3:10318613-10318632 Msa0629460:intron 25.0%
! TAGATTAAGACAGAATTTAG+AGG + chr4_3:10318880-10318899 Msa0629460:intron 25.0%
! AGATTAAGACAGAATTTAGA+GGG + chr4_3:10318881-10318900 Msa0629460:intron 25.0%
!!! TGTTTTTTGTTTTTCACACA+TGG + chr4_3:10319180-10319199 Msa0629460:intron 25.0%
!!! GTTTTTTGTTTTTCACACAT+GGG + chr4_3:10319181-10319200 Msa0629460:intron 25.0%
! TGATGTAGATAAAGTCATAA+AGG + chr4_3:10319366-10319385 Msa0629460:intron 25.0%
! GATGTAGATAAAGTCATAAA+GGG + chr4_3:10319367-10319386 Msa0629460:intron 25.0%
! GGTTGTGATATATATAAAGA+AGG + chr4_3:10319393-10319412 Msa0629460:intron 25.0%
! TGATACCAATTAATAGAAAC+TGG - chr4_3:10319555-10319574 None:intergenic 25.0%
!!! CATTCTTGTTTTTTTTTGAG+AGG - chr4_3:10319662-10319681 None:intergenic 25.0%
!!! AACTTATCTATAGTTCTGAA+TGG + chr4_3:10319785-10319804 Msa0629460:intron 25.0%
! GATGTTATATTGTTACGAAA+GGG + chr4_3:10319826-10319845 Msa0629460:intron 25.0%
! CATTAAAAACCCATTTACAT+TGG - chr4_3:10319866-10319885 None:intergenic 25.0%
! ATTCAAATCATTCTTCTTCT+TGG + chr4_3:10319964-10319983 Msa0629460:intron 25.0%
!!! ATTCTTCTTCTTGGTTTTTT+AGG + chr4_3:10319973-10319992 Msa0629460:intron 25.0%
!! AGCAATGGATAATTTGTAAA+TGG - chr4_3:10320147-10320166 None:intergenic 25.0%
!!! TTTTTCATTTTTAGGGTTTC+CGG + chr4_3:10320198-10320217 Msa0629460:intron 25.0%
! ATTGTTGGATATAAGCATAT+AGG + chr4_3:10320404-10320423 Msa0629460:intron 25.0%
!! AATAAAACAGCTTTTAACAG+AGG + chr4_3:10320458-10320477 Msa0629460:intron 25.0%
!!! CTTCCATTTATTTTCTTTTC+AGG - chr4_3:10320694-10320713 None:intergenic 25.0%
!!! TAGACACATTTTTTGTATCA+GGG - chr4_3:10320756-10320775 None:intergenic 25.0%
!!! TTAGACACATTTTTTGTATC+AGG - chr4_3:10320757-10320776 None:intergenic 25.0%
!! ATTATGTTGATGAATCATTG+TGG + chr4_3:10321097-10321116 Msa0629460:CDS 25.0%
!! TTATGTTGATGAATCATTGT+GGG + chr4_3:10321098-10321117 Msa0629460:CDS 25.0%
!! ATAAAATTAAAAGGTGTAGG+AGG - chr4_3:10321211-10321230 None:intergenic 25.0%
! ATAGTCATAGTTATGTGAAT+AGG + chr4_3:10321468-10321487 Msa0629460:intron 25.0%
! ATAATGAACCCAACAAAAAT+AGG + chr4_3:10321549-10321568 Msa0629460:intron 25.0%
!!! TCCTATATCCTATTTTTGTT+GGG - chr4_3:10321560-10321579 None:intergenic 25.0%
!!! TTCCTATATCCTATTTTTGT+TGG - chr4_3:10321561-10321580 None:intergenic 25.0%
! TAATTACTTCAAACGAAACA+AGG + chr4_3:10321591-10321610 Msa0629460:intron 25.0%
! TTTAAGCTCAACTTGAATAT+TGG - chr4_3:10321645-10321664 None:intergenic 25.0%
!!! CAGAAATTTTTTTAGAGAAC+TGG - chr4_3:10321903-10321922 None:intergenic 25.0%
! ATTGCAATTAATAGAAGGAA+TGG - chr4_3:10322214-10322233 None:intergenic 25.0%
! GTTTGATTGCAATTAATAGA+AGG - chr4_3:10322219-10322238 None:intergenic 25.0%
! AATCCTTTGTGTAAAAGATT+GGG - chr4_3:10322246-10322265 None:intergenic 25.0%
!!! TTATTTTTTCATTGAAGACC+AGG - chr4_3:10322401-10322420 None:intergenic 25.0%
! ATGAGTATTTGTCAATTTAG+TGG + chr4_3:10322686-10322705 Msa0629460:intron 25.0%
!!! TGGTATTGTTGTTTTTAATC+TGG + chr4_3:10322808-10322827 Msa0629460:CDS 25.0%
! TAAATTGTAATGGTTGGAAA+TGG - chr4_3:10323175-10323194 None:intergenic 25.0%
! AAACAGTAAATTGTAATGGT+TGG - chr4_3:10323181-10323200 None:intergenic 25.0%
!!! ATAATTAGGGGTTTTAAGTA+GGG + chr4_3:10323439-10323458 Msa0629460:intron 25.0%
!!! TATAATGGATACTAGTGAAA+AGG + chr4_3:10324021-10324040 Msa0629460:intron 25.0%
! TATTTCTTTCAAAAACCTGT+TGG - chr4_3:10324136-10324155 None:intergenic 25.0%
! ATAATCAACATATGCTTCAT+AGG + chr4_3:10324322-10324341 Msa0629460:intron 25.0%
!! AATTTAGAAGACATTGACTA+AGG - chr4_3:10324455-10324474 None:intergenic 25.0%
!! CTTCTAAATTAATTTTCCAC+AGG + chr4_3:10324465-10324484 Msa0629460:intron 25.0%
! TTCTTCCATGAGTTATAAAT+GGG - chr4_3:10324603-10324622 None:intergenic 25.0%
! ATTCTTCCATGAGTTATAAA+TGG - chr4_3:10324604-10324623 None:intergenic 25.0%
!!! TGTTGATTTAAGTAAACAGA+AGG + chr4_3:10324642-10324661 Msa0629460:CDS 25.0%
! TTCATGAAAGAAAGAAACAA+AGG - chr4_3:10324797-10324816 None:intergenic 25.0%
!!! TTTTTTATGCAGATATAGCA+TGG + chr4_3:10324861-10324880 Msa0629460:intron 25.0%
! GAAGAAATAATGTTGCAAAT+CGG + chr4_3:10325083-10325102 Msa0629460:CDS 25.0%
! ATTAGAGATCTAACGTAATT+TGG - chr4_3:10325259-10325278 None:intergenic 25.0%
! ACAATTTATAGTAGTGCATA+TGG - chr4_3:10325531-10325550 None:intergenic 25.0%
! ACTACTATAAATTGTTGAAG+TGG + chr4_3:10325536-10325555 Msa0629460:CDS 25.0%
!!! GTTGTATTGTTAACTAGTTT+TGG + chr4_3:10325985-10326004 Msa0629460:three_prime_UTR 25.0%
! ATACAGTAACATGAGATTTA+TGG + chr4_3:10326040-10326059 Msa0629460:three_prime_UTR 25.0%
TTAGGGTATGTTTGGATAAA+CGG - chr4_3:10317586-10317605 None:intergenic 30.0%
!!! ATTTTTGGTTAGGGTATGTT+TGG - chr4_3:10317594-10317613 None:intergenic 30.0%
GGGTTTCATAAGAACAAATT+AGG - chr4_3:10317858-10317877 None:intergenic 30.0%
CCAAGAAGAATAATACGTTT+CGG + chr4_3:10317954-10317973 Msa0629460:CDS 30.0%
CAAGAAGAATAATACGTTTC+GGG + chr4_3:10317955-10317974 Msa0629460:CDS 30.0%
CTGTTAATATCAGCAATCAA+GGG - chr4_3:10318191-10318210 None:intergenic 30.0%
!!! TTTTTTGAAGGGTTTTGAAG+GGG - chr4_3:10318437-10318456 None:intergenic 30.0%
!!! CTTTTTTGAAGGGTTTTGAA+GGG - chr4_3:10318438-10318457 None:intergenic 30.0%
!!! ACTTTTTTGAAGGGTTTTGA+AGG - chr4_3:10318439-10318458 None:intergenic 30.0%
CTACCAAAGAAAAGAAATGT+AGG + chr4_3:10318543-10318562 Msa0629460:intron 30.0%
!!! AATTTTGTTTTGGCAGTGAT+GGG + chr4_3:10318623-10318642 Msa0629460:intron 30.0%
ACAAAAATATCATCAGGACA+AGG - chr4_3:10318794-10318813 None:intergenic 30.0%
GCTACAACAAAAATATCATC+AGG - chr4_3:10318800-10318819 None:intergenic 30.0%
AAGAACACTAAGTTACTAAC+TGG + chr4_3:10318935-10318954 Msa0629460:intron 30.0%
AACACGAATCGATAATATGA+CGG - chr4_3:10319226-10319245 None:intergenic 30.0%
GATACTAGTCATGTAAAGTT+TGG + chr4_3:10319288-10319307 Msa0629460:intron 30.0%
! TCATGTAAAGTTTGGCTTAA+AGG + chr4_3:10319296-10319315 Msa0629460:intron 30.0%
AGATAAAGTCATAAAGGGTT+AGG + chr4_3:10319372-10319391 Msa0629460:intron 30.0%
GATATATATAAAGAAGGGGA+AGG + chr4_3:10319399-10319418 Msa0629460:intron 30.0%
ATTAATTGGTATCAGATCTC+TGG + chr4_3:10319561-10319580 Msa0629460:intron 30.0%
TTCTTGTTGAATATGAACAG+CGG - chr4_3:10319626-10319645 None:intergenic 30.0%
!!! GTTTTTTTTTGAGAGGGAAA+AGG - chr4_3:10319655-10319674 None:intergenic 30.0%
TCTCCAAGAATGATAAGAAT+GGG - chr4_3:10319691-10319710 None:intergenic 30.0%
TTCTCCAAGAATGATAAGAA+TGG - chr4_3:10319692-10319711 None:intergenic 30.0%
TTCTTATCATTCTTGGAGAA+TGG + chr4_3:10319692-10319711 Msa0629460:intron 30.0%
CTAAAAATCCCAATCTTTGA+CGG + chr4_3:10319756-10319775 Msa0629460:intron 30.0%
GGATGTTATATTGTTACGAA+AGG + chr4_3:10319825-10319844 Msa0629460:intron 30.0%
TTGTCTATGTCATATAGAAG+TGG - chr4_3:10320036-10320055 None:intergenic 30.0%
CTATATGACATAGACAAAGA+TGG + chr4_3:10320039-10320058 Msa0629460:CDS 30.0%
ACAAATTATCCATTGCTTTG+AGG + chr4_3:10320150-10320169 Msa0629460:intron 30.0%
AATAAAACACCTCAAAGCAA+TGG - chr4_3:10320162-10320181 None:intergenic 30.0%
!!! TGCTTTGAGGTGTTTTATTA+AGG + chr4_3:10320163-10320182 Msa0629460:intron 30.0%
!! GTAGGAAAGTGCTTAAAAAT+TGG + chr4_3:10320253-10320272 Msa0629460:CDS 30.0%
AGTGCTTAAAAATTGGTATG+TGG + chr4_3:10320260-10320279 Msa0629460:CDS 30.0%
GTGCTTAAAAATTGGTATGT+GGG + chr4_3:10320261-10320280 Msa0629460:CDS 30.0%
CTTATCGCTTAGATAATTGT+TGG + chr4_3:10320389-10320408 Msa0629460:intron 30.0%
ATTCTCCTTGTAGAAATGAA+TGG + chr4_3:10320589-10320608 Msa0629460:intron 30.0%
!! TTTATTTTCTTTTCAGGCTC+TGG - chr4_3:10320688-10320707 None:intergenic 30.0%
GAGCCTGAAAAGAAAATAAA+TGG + chr4_3:10320688-10320707 Msa0629460:CDS 30.0%
! CTTCCATTTACTTTCTTTTC+AGG - chr4_3:10320787-10320806 None:intergenic 30.0%
CTGGAAGATAACAACTTAAA+AGG + chr4_3:10320919-10320938 Msa0629460:CDS 30.0%
! TATGTTGATGAATCATTGTG+GGG + chr4_3:10321099-10321118 Msa0629460:CDS 30.0%
! GACTTGTTTATACTTTCTCT+CGG - chr4_3:10321275-10321294 None:intergenic 30.0%
ATTGCAGATATTGACAATGA+TGG + chr4_3:10321317-10321336 Msa0629460:CDS 30.0%
TATCATAACAACGTTGTGAT+TGG + chr4_3:10321440-10321459 Msa0629460:intron 30.0%
TCATAGTTATGTGAATAGGA+TGG + chr4_3:10321472-10321491 Msa0629460:intron 30.0%
TTTGTTGGGTTCATTATGAT+AGG - chr4_3:10321546-10321565 None:intergenic 30.0%
ACCCAACAAAAATAGGATAT+AGG + chr4_3:10321556-10321575 Msa0629460:intron 30.0%
TCTATCAGAGTGAAATTGTA+GGG - chr4_3:10321797-10321816 None:intergenic 30.0%
CTCTGATAGAGAAAGAAATT+TGG + chr4_3:10321807-10321826 Msa0629460:intron 30.0%
! GGACTGAGTTTTTCTTTTTT+TGG + chr4_3:10321865-10321884 Msa0629460:intron 30.0%
AATATGTATACAGCTGCAAA+GGG - chr4_3:10321930-10321949 None:intergenic 30.0%
TTCATCTTGCAGATAAGTAT+TGG - chr4_3:10322051-10322070 None:intergenic 30.0%
ATAGAAGGAATGGTAATTAC+TGG - chr4_3:10322204-10322223 None:intergenic 30.0%
CAATCCTTTGTGTAAAAGAT+TGG - chr4_3:10322247-10322266 None:intergenic 30.0%
! CAATCTTTTACACAAAGGAT+TGG + chr4_3:10322245-10322264 Msa0629460:intron 30.0%
AAGATTGAATGCTCTATTCT+TGG + chr4_3:10322428-10322447 Msa0629460:intron 30.0%
AGATTGAATGCTCTATTCTT+GGG + chr4_3:10322429-10322448 Msa0629460:intron 30.0%
TCCATAAATGACTAGAACAT+TGG + chr4_3:10322457-10322476 Msa0629460:intron 30.0%
ACCAATGTTCTAGTCATTTA+TGG - chr4_3:10322461-10322480 None:intergenic 30.0%
GAGATTTCAAAATTGTTGAG+AGG + chr4_3:10322481-10322500 Msa0629460:intron 30.0%
TATTTGTCAATTTAGTGGTC+TGG + chr4_3:10322691-10322710 Msa0629460:intron 30.0%
ATTCTTGTTGGAACTTCTTA+TGG + chr4_3:10322950-10322969 Msa0629460:CDS 30.0%
GATGATCTAACACATAGAAT+AGG - chr4_3:10322976-10322995 None:intergenic 30.0%
TTCTATGTGTTAGATCATCA+TGG + chr4_3:10322977-10322996 Msa0629460:CDS 30.0%
! CAATAAAGTTTTGCATTGCA+AGG + chr4_3:10323333-10323352 Msa0629460:intron 30.0%
!! GGCTCTGAAATCTTAAAATT+CGG + chr4_3:10323369-10323388 Msa0629460:intron 30.0%
!! GCTCTGAAATCTTAAAATTC+GGG + chr4_3:10323370-10323389 Msa0629460:intron 30.0%
!!! CATAATTAGGGGTTTTAAGT+AGG + chr4_3:10323438-10323457 Msa0629460:intron 30.0%
TTCTGTTCGACTAATAAACA+AGG - chr4_3:10323479-10323498 None:intergenic 30.0%
TCTCTAACTTTACCTATTTG+AGG - chr4_3:10323562-10323581 None:intergenic 30.0%
TTGAGATAGTACATTACATG+TGG - chr4_3:10323748-10323767 None:intergenic 30.0%
TGCTATTAAACATACACTGT+CGG - chr4_3:10323846-10323865 None:intergenic 30.0%
!! TTTAAATTGGTTTGGGTTGA+TGG + chr4_3:10323868-10323887 Msa0629460:intron 30.0%
!! TTAAATTGGTTTGGGTTGAT+GGG + chr4_3:10323869-10323888 Msa0629460:intron 30.0%
TGATGGGATTTCTTAGAATT+TGG + chr4_3:10323885-10323904 Msa0629460:intron 30.0%
GATGGGATTTCTTAGAATTT+GGG + chr4_3:10323886-10323905 Msa0629460:intron 30.0%
ATGGGATTTCTTAGAATTTG+GGG + chr4_3:10323887-10323906 Msa0629460:intron 30.0%
TCGACAAGGTAATTATAAGA+TGG + chr4_3:10323981-10324000 Msa0629460:intron 30.0%
CAAGGTAATTATAAGATGGA+CGG + chr4_3:10323985-10324004 Msa0629460:intron 30.0%
TTCATTGACAAAGGCAAAAT+GGG - chr4_3:10324165-10324184 None:intergenic 30.0%
TTTCATTGACAAAGGCAAAA+TGG - chr4_3:10324166-10324185 None:intergenic 30.0%
!! TGAAAGTGTTTCATTGACAA+AGG - chr4_3:10324174-10324193 None:intergenic 30.0%
CAATGAAACACTTTCAATCA+TGG + chr4_3:10324178-10324197 Msa0629460:intron 30.0%
TTCCCAAATTGTTAAGACAT+GGG + chr4_3:10324249-10324268 Msa0629460:intron 30.0%
CTAATATTCCTTTGTACCTT+TGG + chr4_3:10324356-10324375 Msa0629460:intron 30.0%
! AGTTGTACAAGCTATGTTTT+TGG - chr4_3:10324383-10324402 None:intergenic 30.0%
TAAACAGAAGGAAAAGAAGA+AGG + chr4_3:10324654-10324673 Msa0629460:CDS 30.0%
AAACAGAAGGAAAAGAAGAA+GGG + chr4_3:10324655-10324674 Msa0629460:CDS 30.0%
! TCATTTAGCTTCTGGAAAAT+AGG - chr4_3:10324832-10324851 None:intergenic 30.0%
TTGAAAATATCCTACCTTGA+GGG - chr4_3:10324986-10325005 None:intergenic 30.0%
TTTGAAAATATCCTACCTTG+AGG - chr4_3:10324987-10325006 None:intergenic 30.0%
ATTGCTTTATACCATGTTTC+AGG + chr4_3:10325039-10325058 Msa0629460:intron 30.0%
! ACATTATTTCTTCCTTGGTT+AGG - chr4_3:10325076-10325095 None:intergenic 30.0%
! TTGCAACATTATTTCTTCCT+TGG - chr4_3:10325081-10325100 None:intergenic 30.0%
AATAATGTTGCAAATCGGTA+CGG + chr4_3:10325088-10325107 Msa0629460:CDS 30.0%
GATAATTATAGATACCCATC+TGG + chr4_3:10325196-10325215 Msa0629460:CDS 30.0%
AGATCTAACGTAATTTGGAT+GGG - chr4_3:10325254-10325273 None:intergenic 30.0%
TTATAAACTGAGTGCTTCAT+AGG - chr4_3:10325285-10325304 None:intergenic 30.0%
!! ATTATTTTGTTTCATGCTCC+AGG + chr4_3:10325663-10325682 Msa0629460:three_prime_UTR 30.0%
AGAATCATTTGTTCAAGCTT+TGG + chr4_3:10325791-10325810 Msa0629460:three_prime_UTR 30.0%
CTGATTACACTACACATAAA+GGG - chr4_3:10325874-10325893 None:intergenic 30.0%
TCTGATTACACTACACATAA+AGG - chr4_3:10325875-10325894 None:intergenic 30.0%
GTTTGGATAAACGGCTTATT+TGG - chr4_3:10317577-10317596 None:intergenic 35.0%
!! GACAATTTTGAGAGTCCAAT+TGG + chr4_3:10317657-10317676 Msa0629460:five_prime_UTR 35.0%
CAAACCAGAATCAAAGAAAG+AGG - chr4_3:10317689-10317708 None:intergenic 35.0%
CCGAAACGTATTATTCTTCT+TGG - chr4_3:10317957-10317976 None:intergenic 35.0%
GTTTAGAGATGAAGATGCTT+TGG + chr4_3:10318094-10318113 Msa0629460:intron 35.0%
!! CATCTTAGCTCTAAATTCAC+AGG - chr4_3:10318134-10318153 None:intergenic 35.0%
! CTGTGAATTTAGAGCTAAGA+TGG + chr4_3:10318132-10318151 Msa0629460:CDS 35.0%
! TTTAGAGCTAAGATGGCAAA+CGG + chr4_3:10318139-10318158 Msa0629460:CDS 35.0%
CCTGTTAATATCAGCAATCA+AGG - chr4_3:10318192-10318211 None:intergenic 35.0%
CCTTGATTGCTGATATTAAC+AGG + chr4_3:10318189-10318208 Msa0629460:CDS 35.0%
TTTGTTTGTCTAATGGAGCA+CGG + chr4_3:10318235-10318254 Msa0629460:intron 35.0%
!! CAGTGAATTGATTTTATGGC+AGG - chr4_3:10318341-10318360 None:intergenic 35.0%
!!! TTTTTGAAGGGTTTTGAAGG+GGG - chr4_3:10318436-10318455 None:intergenic 35.0%
! CTCCCTACATTTCTTTTCTT+TGG - chr4_3:10318549-10318568 None:intergenic 35.0%
GAGTAGCTTAATCTTGAGTA+CGG + chr4_3:10318566-10318585 Msa0629460:intron 35.0%
!!! CAATTTTGTTTTGGCAGTGA+TGG + chr4_3:10318622-10318641 Msa0629460:intron 35.0%
TCAAGGTAGTGAACAAAAGA+GGG - chr4_3:10318667-10318686 None:intergenic 35.0%
TTCAAGGTAGTGAACAAAAG+AGG - chr4_3:10318668-10318687 None:intergenic 35.0%
! ACATTGACGATCTTTTTACC+TGG - chr4_3:10318721-10318740 None:intergenic 35.0%
! TAGCCTTGAGATTAGTTGAA+GGG + chr4_3:10318854-10318873 Msa0629460:intron 35.0%
AATCCCTTCAACTAATCTCA+AGG - chr4_3:10318860-10318879 None:intergenic 35.0%
TCGTCTAATTCCTTCTCTTA+TGG - chr4_3:10318907-10318926 None:intergenic 35.0%
TGAAAATTCAAGCCACACAT+GGG - chr4_3:10319012-10319031 None:intergenic 35.0%
ATGAAAATTCAAGCCACACA+TGG - chr4_3:10319013-10319032 None:intergenic 35.0%
TACAAAAGTAGTGCAAACAC+AGG - chr4_3:10319068-10319087 None:intergenic 35.0%
!! TTTGCACTACTTTTGTAAGC+TGG + chr4_3:10319071-10319090 Msa0629460:intron 35.0%
! ACTTTTGTAAGCTGGTGTAA+TGG + chr4_3:10319079-10319098 Msa0629460:intron 35.0%
!! GTCATATTATCGATTCGTGT+TGG + chr4_3:10319225-10319244 Msa0629460:intron 35.0%
! ATACAACTCTCCTCTTTTAC+TGG + chr4_3:10319261-10319280 Msa0629460:intron 35.0%
AGTATCTAAGCCAGTAAAAG+AGG - chr4_3:10319274-10319293 None:intergenic 35.0%
AAGGTATGACATAACACCAT+AGG + chr4_3:10319315-10319334 Msa0629460:intron 35.0%
TCATGTCAATTGAGAGAGTT+AGG + chr4_3:10319438-10319457 Msa0629460:intron 35.0%
TGCAAGCTGTACTGTTATAA+GGG + chr4_3:10319498-10319517 Msa0629460:intron 35.0%
CTTCTGAATTGTCAATATGC+AGG - chr4_3:10319603-10319622 None:intergenic 35.0%
GATCCCATTCTTATCATTCT+TGG + chr4_3:10319685-10319704 Msa0629460:intron 35.0%
TATCATTCTTGGAGAATGGA+AGG + chr4_3:10319696-10319715 Msa0629460:intron 35.0%
TTTCTTCTCCGTCAAAGATT+GGG - chr4_3:10319767-10319786 None:intergenic 35.0%
GTTATATTGTTACGAAAGGG+TGG + chr4_3:10319829-10319848 Msa0629460:intron 35.0%
TGATCTATCAGAATAAGGAC+AGG - chr4_3:10319923-10319942 None:intergenic 35.0%
CCAGATGATCTATCAGAATA+AGG - chr4_3:10319928-10319947 None:intergenic 35.0%
CCTTATTCTGATAGATCATC+TGG + chr4_3:10319925-10319944 Msa0629460:intron 35.0%
!!! TTCTTCTTGGTTTTTTAGGC+TGG + chr4_3:10319977-10319996 Msa0629460:intron 35.0%
AAATAGCACTTCACCATTGT+AGG - chr4_3:10320088-10320107 None:intergenic 35.0%
!!! ATGGTGAAGTGCTATTTTTC+AGG + chr4_3:10320091-10320110 Msa0629460:CDS 35.0%
! TTTTAAGCACTTTCCTACGT+GGG - chr4_3:10320251-10320270 None:intergenic 35.0%
!! TTTTTAAGCACTTTCCTACG+TGG - chr4_3:10320252-10320271 None:intergenic 35.0%
TTGGTATGTGGGTTTGAATA+AGG + chr4_3:10320272-10320291 Msa0629460:CDS 35.0%
ATAAGCACAGCAGAAACTTA+CGG - chr4_3:10320374-10320393 None:intergenic 35.0%
AATAAATGGAAGCCAATCAG+AGG + chr4_3:10320702-10320721 Msa0629460:CDS 35.0%
TGTTAATACTCTCCTCTGAT+TGG - chr4_3:10320717-10320736 None:intergenic 35.0%
!! TTTACTTTCTTTTCAGGCTC+TGG - chr4_3:10320781-10320800 None:intergenic 35.0%
GAGCCTGAAAAGAAAGTAAA+TGG + chr4_3:10320781-10320800 Msa0629460:CDS 35.0%
GATGAATTATCAGCAACTGT+TGG - chr4_3:10320835-10320854 None:intergenic 35.0%
ATGAACTTCTTCCTTACCTT+TGG - chr4_3:10320968-10320987 None:intergenic 35.0%
!! GTGATGAAGAATGGATTGAA+GGG + chr4_3:10321121-10321140 Msa0629460:CDS 35.0%
! TATTGACAATGATGGCGTAA+TGG + chr4_3:10321325-10321344 Msa0629460:CDS 35.0%
TATAAGCATAGACTCACTCT+TGG - chr4_3:10321382-10321401 None:intergenic 35.0%
GAACCAAAATAGTCAGCTAA+AGG - chr4_3:10321524-10321543 None:intergenic 35.0%
! CATGATCTCTTTTGCAGTAT+CGG + chr4_3:10321694-10321713 Msa0629460:intron 35.0%
CTCTATCAGAGTGAAATTGT+AGG - chr4_3:10321798-10321817 None:intergenic 35.0%
! TGTTTTCAATCCAATCTGCA+TGG + chr4_3:10321844-10321863 Msa0629460:intron 35.0%
CAATATGTATACAGCTGCAA+AGG - chr4_3:10321931-10321950 None:intergenic 35.0%
AAACGATAAAAGTCACATGC+TGG + chr4_3:10322085-10322104 Msa0629460:intron 35.0%
AACGATAAAAGTCACATGCT+GGG + chr4_3:10322086-10322105 Msa0629460:intron 35.0%
!! TGTGGCGTTTTAACAGATAA+TGG + chr4_3:10322120-10322139 Msa0629460:intron 35.0%
TTAGCAATGTTTAAGCTGAC+AGG + chr4_3:10322720-10322739 Msa0629460:intron 35.0%
! CAGGAGCATATGAAAGAATT+GGG + chr4_3:10322755-10322774 Msa0629460:CDS 35.0%
AATTGGGCGATATTGACATT+GGG + chr4_3:10322771-10322790 Msa0629460:CDS 35.0%
!!! AGGTCTTCATTGATTTTCTC+TGG + chr4_3:10323068-10323087 Msa0629460:intron 35.0%
!!! GGTCTTCATTGATTTTCTCT+GGG + chr4_3:10323069-10323088 Msa0629460:intron 35.0%
TCACAGAAAAGAAACACTTC+TGG - chr4_3:10323258-10323277 None:intergenic 35.0%
! AAAGTTTTGCATTGCAAGGT+CGG + chr4_3:10323337-10323356 Msa0629460:intron 35.0%
TATTAGTCGAACAGAAGCTT+TGG + chr4_3:10323483-10323502 Msa0629460:intron 35.0%
GCAGCTGATATTAATGATGA+TGG + chr4_3:10323625-10323644 Msa0629460:CDS 35.0%
TCCCAAATCATATCTCCTTT+GGG - chr4_3:10323703-10323722 None:intergenic 35.0%
TTCCCAAATCATATCTCCTT+TGG - chr4_3:10323704-10323723 None:intergenic 35.0%
TGTACTATCTCAATCTTCCT+TGG + chr4_3:10323755-10323774 Msa0629460:intron 35.0%
! GTTTTGCTGAATATTGAACG+TGG + chr4_3:10323818-10323837 Msa0629460:intron 35.0%
CTAGTATCCATTATAGTCTC+CGG - chr4_3:10324016-10324035 None:intergenic 35.0%
TAAGTTTCTCATTTGCCAAC+AGG + chr4_3:10324118-10324137 Msa0629460:intron 35.0%
CTTCCCAAATTGTTAAGACA+TGG + chr4_3:10324248-10324267 Msa0629460:intron 35.0%
AGCCCATGTCTTAACAATTT+GGG - chr4_3:10324254-10324273 None:intergenic 35.0%
!! TTTTTGGACCAAAGGTACAA+AGG - chr4_3:10324367-10324386 None:intergenic 35.0%
!!! AAGCTATGTTTTTGGACCAA+AGG - chr4_3:10324375-10324394 None:intergenic 35.0%
TTAAGAGCAAAACTGCTCAA+TGG - chr4_3:10324424-10324443 None:intergenic 35.0%
TTGTTGTACCAACACTATCT+GGG + chr4_3:10324530-10324549 Msa0629460:CDS 35.0%
AGATTCATGTTCTTGATGGA+AGG + chr4_3:10324554-10324573 Msa0629460:CDS 35.0%
GATTCATGTTCTTGATGGAA+GGG + chr4_3:10324555-10324574 Msa0629460:CDS 35.0%
ATCAAACGAAGAGGTAACAA+GGG - chr4_3:10324686-10324705 None:intergenic 35.0%
CAAATAACCATCAAACGAAG+AGG - chr4_3:10324695-10324714 None:intergenic 35.0%
GGTTATTTGTACCTCATTGA+TGG + chr4_3:10324706-10324725 Msa0629460:CDS 35.0%
! TAGCTTCTGGAAAATAGGAT+GGG - chr4_3:10324827-10324846 None:intergenic 35.0%
! TTAGCTTCTGGAAAATAGGA+TGG - chr4_3:10324828-10324847 None:intergenic 35.0%
! TTACTCGTTCATTTAGCTTC+TGG - chr4_3:10324840-10324859 None:intergenic 35.0%
TGAAAATATCCTACCTTGAG+GGG - chr4_3:10324985-10325004 None:intergenic 35.0%
TTTATACCATGTTTCAGGCA+TGG + chr4_3:10325044-10325063 Msa0629460:intron 35.0%
TCTATGTAACTCATCCTTCA+AGG + chr4_3:10325122-10325141 Msa0629460:CDS 35.0%
CTATGTAACTCATCCTTCAA+GGG + chr4_3:10325123-10325142 Msa0629460:CDS 35.0%
!!! GGAAGGAAAGAGTTTTTTTG+TGG + chr4_3:10325159-10325178 Msa0629460:CDS 35.0%
GAGATCTAACGTAATTTGGA+TGG - chr4_3:10325255-10325274 None:intergenic 35.0%
GATGATTTCACAGCATGAAA+AGG - chr4_3:10325321-10325340 None:intergenic 35.0%
ATGTTTACCAGGCTGATAAT+AGG - chr4_3:10325404-10325423 None:intergenic 35.0%
AGCTTAATTCGATGTTTACC+AGG - chr4_3:10325415-10325434 None:intergenic 35.0%
TTCTTGTTCTTCCAATGCTT+GGG + chr4_3:10325560-10325579 Msa0629460:CDS 35.0%
TTCCTTGAAAATGATGGCAA+TGG - chr4_3:10325628-10325647 None:intergenic 35.0%
TCGTTGTTCCTTGAAAATGA+TGG - chr4_3:10325634-10325653 None:intergenic 35.0%
ACATCAAATTGAGTTATCCC+TGG + chr4_3:10325722-10325741 Msa0629460:three_prime_UTR 35.0%
CATCAAATTGAGTTATCCCT+GGG + chr4_3:10325723-10325742 Msa0629460:three_prime_UTR 35.0%
! ATTTGTTCAAGCTTTGGTTC+AGG + chr4_3:10325797-10325816 Msa0629460:three_prime_UTR 35.0%
! TTTGTTCAAGCTTTGGTTCA+GGG + chr4_3:10325798-10325817 Msa0629460:three_prime_UTR 35.0%
AGTGAATGAGATCCTGATAT+TGG + chr4_3:10325841-10325860 Msa0629460:three_prime_UTR 35.0%
AAGGGCAAAATTCCAATATC+AGG - chr4_3:10325856-10325875 None:intergenic 35.0%
! TGTAGAACTGAACGTGTTTT+TGG + chr4_3:10325903-10325922 Msa0629460:three_prime_UTR 35.0%
TTGGTTTCAACTTTACGATG+TGG + chr4_3:10326004-10326023 Msa0629460:three_prime_UTR 35.0%
TCGTCCTCTTTCTTTGATTC+TGG + chr4_3:10317682-10317701 Msa0629460:five_prime_UTR 40.0%
GAAAACGGAGGATGAAAAAG+TGG - chr4_3:10317921-10317940 None:intergenic 40.0%
!!! TTTTGAAGGGTTTTGAAGGG+GGG - chr4_3:10318435-10318454 None:intergenic 40.0%
TCACTACCTTGAAGTTCTTG+AGG + chr4_3:10318675-10318694 Msa0629460:CDS 40.0%
CACTACCTTGAAGTTCTTGA+GGG + chr4_3:10318676-10318695 Msa0629460:CDS 40.0%
! GTAGCCTTGAGATTAGTTGA+AGG + chr4_3:10318853-10318872 Msa0629460:intron 40.0%
ATTTAGAGGGCCATAAGAGA+AGG + chr4_3:10318894-10318913 Msa0629460:intron 40.0%
CTACATAGTGTGTCACACAA+GGG + chr4_3:10319132-10319151 Msa0629460:intron 40.0%
CATGGGTAATGACTTAGCAT+CGG + chr4_3:10319198-10319217 Msa0629460:intron 40.0%
GTATGACATAACACCATAGG+CGG + chr4_3:10319318-10319337 Msa0629460:intron 40.0%
AATGGCTCCTTGTACTGTTA+GGG + chr4_3:10319341-10319360 Msa0629460:intron 40.0%
AAGGGGAAGGAATTATAGAG+AGG + chr4_3:10319412-10319431 Msa0629460:intron 40.0%
AGGGGAAGGAATTATAGAGA+GGG + chr4_3:10319413-10319432 Msa0629460:intron 40.0%
ATTGAGAGAGTTAGGTCTTC+TGG + chr4_3:10319446-10319465 Msa0629460:intron 40.0%
AGTTAGGTCTTCTGGACATT+GGG + chr4_3:10319454-10319473 Msa0629460:intron 40.0%
TACAGCTTGCAGAACATCAT+GGG - chr4_3:10319489-10319508 None:intergenic 40.0%
CTGCAAGCTGTACTGTTATA+AGG + chr4_3:10319497-10319516 Msa0629460:intron 40.0%
GCAAGCTGTACTGTTATAAG+GGG + chr4_3:10319499-10319518 Msa0629460:intron 40.0%
TGGTATCAGATCTCTGGTAT+TGG + chr4_3:10319567-10319586 Msa0629460:intron 40.0%
! GATCTCTGGTATTGGAGATT+CGG + chr4_3:10319575-10319594 Msa0629460:intron 40.0%
! ATCTCTGGTATTGGAGATTC+GGG + chr4_3:10319576-10319595 Msa0629460:intron 40.0%
GTTTCTTCTCCGTCAAAGAT+TGG - chr4_3:10319768-10319787 None:intergenic 40.0%
!! TAGTTCTGAATGGAAGCCTA+AGG + chr4_3:10319795-10319814 Msa0629460:intron 40.0%
ATAACATCCTACCCTTCCTT+AGG - chr4_3:10319814-10319833 None:intergenic 40.0%
TGCAGAGGACCAATGTAAAT+GGG + chr4_3:10319854-10319873 Msa0629460:intron 40.0%
!! ATAGCTTTGGCAACCTACAA+TGG + chr4_3:10320072-10320091 Msa0629460:CDS 40.0%
CTTGTCTGACATGATATAGC+CGG - chr4_3:10320220-10320239 None:intergenic 40.0%
TATCATGTCAGACAAGCTTG+AGG + chr4_3:10320224-10320243 Msa0629460:CDS 40.0%
GTCATCATGAACATCAGGAT+GGG - chr4_3:10320313-10320332 None:intergenic 40.0%
AGTTGGTCATCATGAACATC+AGG - chr4_3:10320318-10320337 None:intergenic 40.0%
TAGTAGCTTCTTGGACAAGT+TGG - chr4_3:10320335-10320354 None:intergenic 40.0%
AATTCGCGATAGTAGCTTCT+TGG - chr4_3:10320344-10320363 None:intergenic 40.0%
TAAGCACAGCAGAAACTTAC+GGG - chr4_3:10320373-10320392 None:intergenic 40.0%
GGCTTCCATTCATTTCTACA+AGG - chr4_3:10320597-10320616 None:intergenic 40.0%
CTGAGGAATTAACTTCGTGT+CGG - chr4_3:10320618-10320637 None:intergenic 40.0%
!! TAGACACGCTTTTTGTGTCA+GGG - chr4_3:10320663-10320682 None:intergenic 40.0%
!! TTAGACACGCTTTTTGTGTC+AGG - chr4_3:10320664-10320683 None:intergenic 40.0%
AGTAAATGGAAGCCAATCAG+AGG + chr4_3:10320795-10320814 Msa0629460:CDS 40.0%
TCTTAATACCCTCCTCTGAT+TGG - chr4_3:10320810-10320829 None:intergenic 40.0%
GATAATTCATCTGTCAGTGC+TGG + chr4_3:10320844-10320863 Msa0629460:CDS 40.0%
CAGACAACAAGACTAGCATT+GGG + chr4_3:10320887-10320906 Msa0629460:CDS 40.0%
TTAAAAGGAGCTGAGCAAGT+TGG + chr4_3:10320934-10320953 Msa0629460:CDS 40.0%
!! CAAGTTGGTTCTGAATCCAA+AGG + chr4_3:10320949-10320968 Msa0629460:CDS 40.0%
!! TGGTTCTGAATCCAAAGGTA+AGG + chr4_3:10320954-10320973 Msa0629460:CDS 40.0%
!! GGTGATGAAGAATGGATTGA+AGG + chr4_3:10321120-10321139 Msa0629460:CDS 40.0%
! AGGGAAGCATGAGAAATTAG+AGG + chr4_3:10321140-10321159 Msa0629460:CDS 40.0%
!! GTCGTTTTCTTGTCTTTTCC+AGG + chr4_3:10321292-10321311 Msa0629460:intron 40.0%
TGTCAATATCTGCAATGACC+TGG - chr4_3:10321313-10321332 None:intergenic 40.0%
! CAATGATGGCGTAATGGAAA+TGG + chr4_3:10321331-10321350 Msa0629460:CDS 40.0%
! GCACCTTTAGCTGACTATTT+TGG + chr4_3:10321518-10321537 Msa0629460:intron 40.0%
!! TCTTTTGCAGTATCGGAAAC+AGG + chr4_3:10321701-10321720 Msa0629460:intron 40.0%
!! CTTTTGCAGTATCGGAAACA+GGG + chr4_3:10321702-10321721 Msa0629460:intron 40.0%
TATCGGAAACAGGGTATGTT+GGG + chr4_3:10321711-10321730 Msa0629460:intron 40.0%
AAAACTCAGTCCATGCAGAT+TGG - chr4_3:10321857-10321876 None:intergenic 40.0%
! CAGCCCAATCTTTTACACAA+AGG + chr4_3:10322240-10322259 Msa0629460:intron 40.0%
!! CTAAGCTCTAGATATACACC+TGG + chr4_3:10322380-10322399 Msa0629460:intron 40.0%
TTGTCAATTTAGTGGTCTGG+TGG + chr4_3:10322694-10322713 Msa0629460:intron 40.0%
TGACAGGTATTATGACAACC+AGG + chr4_3:10322736-10322755 Msa0629460:intron 40.0%
CCAATTCTTTCATATGCTCC+TGG - chr4_3:10322757-10322776 None:intergenic 40.0%
! CCAGGAGCATATGAAAGAAT+TGG + chr4_3:10322754-10322773 Msa0629460:CDS 40.0%
GAATTGGGCGATATTGACAT+TGG + chr4_3:10322770-10322789 Msa0629460:CDS 40.0%
GACATTGGGAAATATGTTGC+TGG + chr4_3:10322785-10322804 Msa0629460:CDS 40.0%
ATTGGGAAATATGTTGCTGG+TGG + chr4_3:10322788-10322807 Msa0629460:CDS 40.0%
TGGACACAAAACAAGTCAAG+TGG + chr4_3:10322828-10322847 Msa0629460:CDS 40.0%
GAGAAGAATATACGTACGCT+CGG - chr4_3:10322892-10322911 None:intergenic 40.0%
TTCTCCAACTGTTGTAGACT+TGG + chr4_3:10322907-10322926 Msa0629460:CDS 40.0%
TTGTAGACTTGGATGGTGAT+GGG + chr4_3:10322918-10322937 Msa0629460:CDS 40.0%
! TAGATCATCATGGTAATGCC+TGG + chr4_3:10322987-10323006 Msa0629460:intron 40.0%
! GTATGGTTGTGCTACTATCT+GGG - chr4_3:10323129-10323148 None:intergenic 40.0%
GGAGATGAATCTCCTTGTAA+GGG - chr4_3:10323154-10323173 None:intergenic 40.0%
TGGAGATGAATCTCCTTGTA+AGG - chr4_3:10323155-10323174 None:intergenic 40.0%
!!! TTGCAAGGTCGGACATTTTT+TGG + chr4_3:10323348-10323367 Msa0629460:intron 40.0%
AGAGAAGTTCCCTCTTGAAA+TGG + chr4_3:10323579-10323598 Msa0629460:CDS 40.0%
AACAACACCTGCTTGAATCT+CGG - chr4_3:10323605-10323624 None:intergenic 40.0%
CCATGCAACAACATTTCCAT+GGG - chr4_3:10323677-10323696 None:intergenic 40.0%
TCCATGCAACAACATTTCCA+TGG - chr4_3:10323678-10323697 None:intergenic 40.0%
CCAAATCATATCTCCTTTGG+GGG - chr4_3:10323701-10323720 None:intergenic 40.0%
CCCAAATCATATCTCCTTTG+GGG - chr4_3:10323702-10323721 None:intergenic 40.0%
CCCCAAAGGAGATATGATTT+GGG + chr4_3:10323699-10323718 Msa0629460:CDS 40.0%
GGATTTCTTAGAATTTGGGG+TGG + chr4_3:10323890-10323909 Msa0629460:intron 40.0%
! ATGCCATTTCACATCCAAAG+TGG + chr4_3:10323953-10323972 Msa0629460:intron 40.0%
AAGAGTAATGAAAGCAAGCC+AGG + chr4_3:10324073-10324092 Msa0629460:intron 40.0%
AGAGTAATGAAAGCAAGCCA+GGG + chr4_3:10324074-10324093 Msa0629460:intron 40.0%
AATGAAAACTGGCAGCTCAA+AGG - chr4_3:10324216-10324235 None:intergenic 40.0%
GAGCCCATGTCTTAACAATT+TGG - chr4_3:10324255-10324274 None:intergenic 40.0%
! CCAACTATTGGTGATATCGA+CGG + chr4_3:10324490-10324509 Msa0629460:CDS 40.0%
! CAACTATTGGTGATATCGAC+GGG + chr4_3:10324491-10324510 Msa0629460:CDS 40.0%
! AACTATTGGTGATATCGACG+GGG + chr4_3:10324492-10324511 Msa0629460:CDS 40.0%
TTGGTACAACAAGCTCAGTA+CGG - chr4_3:10324522-10324541 None:intergenic 40.0%
! CTTGTTGTACCAACACTATC+TGG + chr4_3:10324529-10324548 Msa0629460:CDS 40.0%
TGAATCTTCCCAGATAGTGT+TGG - chr4_3:10324541-10324560 None:intergenic 40.0%
GGGAAGATTCATGTTCTTGA+TGG + chr4_3:10324550-10324569 Msa0629460:CDS 40.0%
! ATAAATGGGTACCGTCCAAT+AGG - chr4_3:10324589-10324608 None:intergenic 40.0%
CGGTACCCATTTATAACTCA+TGG + chr4_3:10324595-10324614 Msa0629460:CDS 40.0%
CATCAAACGAAGAGGTAACA+AGG - chr4_3:10324687-10324706 None:intergenic 40.0%
CTTGTTACCTCTTCGTTTGA+TGG + chr4_3:10324685-10324704 Msa0629460:CDS 40.0%
! TGTGCTGATGTTGTTGACAT+TGG + chr4_3:10324739-10324758 Msa0629460:CDS 40.0%
ATGCAGATATAGCATGGTCT+TGG + chr4_3:10324867-10324886 Msa0629460:intron 40.0%
CTGATTGTCTCGACAATGAA+TGG + chr4_3:10324922-10324941 Msa0629460:CDS 40.0%
AACTCTTTCCTTCCTCATCA+CGG - chr4_3:10325153-10325172 None:intergenic 40.0%
GAACTTACAGTGACATGGTA+TGG - chr4_3:10325232-10325251 None:intergenic 40.0%
! GCTTTATTGTTCTCTCTCCT+TGG - chr4_3:10325372-10325391 None:intergenic 40.0%
GTCGAGATGGTTGACAAAAA+TGG + chr4_3:10325472-10325491 Msa0629460:CDS 40.0%
CTTCTTGTTCTTCCAATGCT+TGG + chr4_3:10325559-10325578 Msa0629460:CDS 40.0%
AAAATGATGGCAATGGCACT+GGG - chr4_3:10325621-10325640 None:intergenic 40.0%
! TGCCATTGCCATCATTTTCA+AGG + chr4_3:10325623-10325642 Msa0629460:CDS 40.0%
TTCACATTTCCTGAGCTCAA+TGG - chr4_3:10325693-10325712 None:intergenic 40.0%
CTTTGATCACGTAGTCAAAG+TGG + chr4_3:10325758-10325777 Msa0629460:three_prime_UTR 40.0%
! TTTGGTTCAGGGATAGTTGA+GGG + chr4_3:10325809-10325828 Msa0629460:three_prime_UTR 40.0%
AGAAAGAGGACGACACCAAT+TGG - chr4_3:10317675-10317694 None:intergenic 45.0%
ATCTGAGTGTGTGAAGCGAT+GGG - chr4_3:10317733-10317752 None:intergenic 45.0%
ATCGCTTCACACACTCAGAT+CGG + chr4_3:10317733-10317752 Msa0629460:five_prime_UTR 45.0%
TGATGGGAAGCTTGACATAG+TGG + chr4_3:10318639-10318658 Msa0629460:CDS 45.0%
! ACCTGGCATTTTGTCTCCAT+CGG - chr4_3:10318704-10318723 None:intergenic 45.0%
TTGATTCTCTGTCCCATGTG+TGG + chr4_3:10318997-10319016 Msa0629460:intron 45.0%
GCTACATAGTGTGTCACACA+AGG + chr4_3:10319131-10319150 Msa0629460:intron 45.0%
ACATAACACCATAGGCGGAA+TGG + chr4_3:10319323-10319342 Msa0629460:intron 45.0%
GAATGGCTCCTTGTACTGTT+AGG + chr4_3:10319340-10319359 Msa0629460:intron 45.0%
CATCACACCCTAACAGTACA+AGG - chr4_3:10319351-10319370 None:intergenic 45.0%
GAGTTAGGTCTTCTGGACAT+TGG + chr4_3:10319453-10319472 Msa0629460:intron 45.0%
GTACAGCTTGCAGAACATCA+TGG - chr4_3:10319490-10319509 None:intergenic 45.0%
CTTGGAGAATGGAAGGAACT+TGG + chr4_3:10319703-10319722 Msa0629460:intron 45.0%
TCTGAATGGAAGCCTAAGGA+AGG + chr4_3:10319799-10319818 Msa0629460:intron 45.0%
CTGAATGGAAGCCTAAGGAA+GGG + chr4_3:10319800-10319819 Msa0629460:intron 45.0%
CTGCAGAGGACCAATGTAAA+TGG + chr4_3:10319853-10319872 Msa0629460:intron 45.0%
TAGAATGCACAGTCGATTGG+TGG - chr4_3:10320011-10320030 None:intergenic 45.0%
GACTAGAATGCACAGTCGAT+TGG - chr4_3:10320014-10320033 None:intergenic 45.0%
TGGCGTGAGAGAAATAGCTT+TGG + chr4_3:10320059-10320078 Msa0629460:CDS 45.0%
GGGTTTGAATAAGGATCCAG+TGG + chr4_3:10320281-10320300 Msa0629460:CDS 45.0%
CATGAACATCAGGATGGGTA+CGG - chr4_3:10320308-10320327 None:intergenic 45.0%
GGTCATCATGAACATCAGGA+TGG - chr4_3:10320314-10320333 None:intergenic 45.0%
TTCTGTTGATGTGGAAGCTG+AGG - chr4_3:10320635-10320654 None:intergenic 45.0%
AGGGTGACTTTCTGTTGATG+TGG - chr4_3:10320644-10320663 None:intergenic 45.0%
AAATGGAAGCCAATCAGAGG+AGG + chr4_3:10320705-10320724 Msa0629460:CDS 45.0%
AATGGAAGCCAATCAGAGGA+GGG + chr4_3:10320706-10320725 Msa0629460:CDS 45.0%
GCAGACAACAAGACTAGCAT+TGG + chr4_3:10320886-10320905 Msa0629460:CDS 45.0%
! ACAACAAGACTAGCATTGGG+AGG + chr4_3:10320890-10320909 Msa0629460:CDS 45.0%
AGAAGTTCATGCTGCAACTG+TGG + chr4_3:10320978-10320997 Msa0629460:CDS 45.0%
TGCTGCAACTGTGGAAAATG+AGG + chr4_3:10320987-10321006 Msa0629460:CDS 45.0%
GCAACTGTGGAAAATGAGGA+AGG + chr4_3:10320991-10321010 Msa0629460:CDS 45.0%
TGTGGAAAATGAGGAAGGAC+TGG + chr4_3:10320996-10321015 Msa0629460:CDS 45.0%
ATTCCGCAATAGTGATGACC+TGG + chr4_3:10321047-10321066 Msa0629460:CDS 45.0%
CATAGTTGTACTCATCAGCC+AGG - chr4_3:10321068-10321087 None:intergenic 45.0%
CATTGTGGGGTGATGAAGAA+TGG + chr4_3:10321112-10321131 Msa0629460:CDS 45.0%
AAGGTGTAGGAGGAACTAAC+AGG - chr4_3:10321201-10321220 None:intergenic 45.0%
GTATCGGAAACAGGGTATGT+TGG + chr4_3:10321710-10321729 Msa0629460:intron 45.0%
CCATCCAAGTCTACAACAGT+TGG - chr4_3:10322914-10322933 None:intergenic 45.0%
CCAACTGTTGTAGACTTGGA+TGG + chr4_3:10322911-10322930 Msa0629460:CDS 45.0%
GTTGTAGACTTGGATGGTGA+TGG + chr4_3:10322917-10322936 Msa0629460:CDS 45.0%
GGGTATCTGGACATTCTTGT+TGG + chr4_3:10322938-10322957 Msa0629460:CDS 45.0%
! GGTATGGTTGTGCTACTATC+TGG - chr4_3:10323130-10323149 None:intergenic 45.0%
ACAACCATACCACCCTTACA+AGG + chr4_3:10323139-10323158 Msa0629460:intron 45.0%
ATCTCCTTGTAAGGGTGGTA+TGG - chr4_3:10323146-10323165 None:intergenic 45.0%
GATGAATCTCCTTGTAAGGG+TGG - chr4_3:10323151-10323170 None:intergenic 45.0%
GAATCTCGGCCATTTCAAGA+GGG - chr4_3:10323591-10323610 None:intergenic 45.0%
TGAATCTCGGCCATTTCAAG+AGG - chr4_3:10323592-10323611 None:intergenic 45.0%
CTAGTTACTGCTGATACCCA+TGG + chr4_3:10323658-10323677 Msa0629460:CDS 45.0%
CCCATGGAAATGTTGTTGCA+TGG + chr4_3:10323674-10323693 Msa0629460:CDS 45.0%
CCCCCAAAGGAGATATGATT+TGG + chr4_3:10323698-10323717 Msa0629460:CDS 45.0%
CTACACTCATTGACATGCCA+AGG - chr4_3:10323775-10323794 None:intergenic 45.0%
GCACCACTTTGGATGTGAAA+TGG - chr4_3:10323959-10323978 None:intergenic 45.0%
TATAAGATGGACGGAGAAGC+CGG + chr4_3:10323994-10324013 Msa0629460:intron 45.0%
!! ATGGGCTCTTCTGTTTCTGA+TGG + chr4_3:10324267-10324286 Msa0629460:intron 45.0%
TTTCCACAGGCTCCAACTAT+TGG + chr4_3:10324478-10324497 Msa0629460:intron 45.0%
CCGTCGATATCACCAATAGT+TGG - chr4_3:10324493-10324512 None:intergenic 45.0%
CATGTTCTTGATGGAAGGGA+TGG + chr4_3:10324559-10324578 Msa0629460:CDS 45.0%
! TACCTCATTGATGGACCTAC+AGG + chr4_3:10324715-10324734 Msa0629460:CDS 45.0%
GTCTTGGCAGACAATGTAGA+TGG + chr4_3:10324883-10324902 Msa0629460:CDS 45.0%
TTGGCAGACAATGTAGATGG+TGG + chr4_3:10324886-10324905 Msa0629460:CDS 45.0%
TGGCAGACAATGTAGATGGT+GGG + chr4_3:10324887-10324906 Msa0629460:CDS 45.0%
AATATCCTACCTTGAGGGGA+TGG - chr4_3:10324981-10325000 None:intergenic 45.0%
CAATCTCCATGCCTGAAACA+TGG - chr4_3:10325053-10325072 None:intergenic 45.0%
AGATACCCATCTGGTCATCA+AGG + chr4_3:10325205-10325224 Msa0629460:CDS 45.0%
! ATGGTCCTTGATGACCAGAT+GGG - chr4_3:10325213-10325232 None:intergenic 45.0%
! TATGGTCCTTGATGACCAGA+TGG - chr4_3:10325214-10325233 None:intergenic 45.0%
GATGGGAACTTACAGTGACA+TGG - chr4_3:10325237-10325256 None:intergenic 45.0%
! TCTCTCCTTGGTAATTGCCA+GGG - chr4_3:10325360-10325379 None:intergenic 45.0%
AACCAGACCTATTATCAGCC+TGG + chr4_3:10325394-10325413 Msa0629460:CDS 45.0%
TACCAGGCTGATAATAGGTC+TGG - chr4_3:10325399-10325418 None:intergenic 45.0%
TCGAATTAAGCTGCCAACTG+TGG + chr4_3:10325423-10325442 Msa0629460:CDS 45.0%
CGAATTAAGCTGCCAACTGT+GGG + chr4_3:10325424-10325443 Msa0629460:CDS 45.0%
! AAGGACCACAGGAACAGTTT+TGG + chr4_3:10325450-10325469 Msa0629460:CDS 45.0%
!! AGGAACAGTTTTGGTCGAGA+TGG + chr4_3:10325459-10325478 Msa0629460:CDS 45.0%
CTTCCAATGCTTGGGATGTT+TGG + chr4_3:10325568-10325587 Msa0629460:CDS 45.0%
ACACCAAACATCCCAAGCAT+TGG - chr4_3:10325574-10325593 None:intergenic 45.0%
GAAAATGATGGCAATGGCAC+TGG - chr4_3:10325622-10325641 None:intergenic 45.0%
TACGTGATCAAAGCTCACTG+CGG - chr4_3:10325751-10325770 None:intergenic 45.0%
! CTTTGGTTCAGGGATAGTTG+AGG + chr4_3:10325808-10325827 Msa0629460:three_prime_UTR 45.0%
GATCTGAGTGTGTGAAGCGA+TGG - chr4_3:10317734-10317753 None:intergenic 50.0%
! TTCATCCTCCGTTTTCGCAG+AGG + chr4_3:10317925-10317944 Msa0629460:CDS 50.0%
GGTATCCTCCTCTGCGAAAA+CGG - chr4_3:10317936-10317955 None:intergenic 50.0%
TGGGTAACCGAGTGCATCAT+CGG - chr4_3:10317993-10318012 None:intergenic 50.0%
ACCGATGGAGACAAAATGCC+AGG + chr4_3:10318700-10318719 Msa0629460:CDS 50.0%
CTGCGTCATTTGCTTCTCTC+TGG - chr4_3:10318971-10318990 None:intergenic 50.0%
TAGGTCTTCTGGACATTGGG+TGG + chr4_3:10319457-10319476 Msa0629460:intron 50.0%
GGAGAATGGAAGGAACTTGG+AGG + chr4_3:10319706-10319725 Msa0629460:intron 50.0%
ATGGAAGCCTAAGGAAGGGT+AGG + chr4_3:10319804-10319823 Msa0629460:intron 50.0%
ACAGTCGATTGGTGGAAAGC+AGG - chr4_3:10320003-10320022 None:intergenic 50.0%
TAGCAGCCACGAAGTTTCTG+CGG + chr4_3:10320493-10320512 Msa0629460:intron 50.0%
TGTAGACCGCAGAAACTTCG+TGG - chr4_3:10320502-10320521 None:intergenic 50.0%
!! ATCTGTCAGTGCTGGTTCTG+TGG + chr4_3:10320852-10320871 Msa0629460:CDS 50.0%
! ACAAGACTAGCATTGGGAGG+CGG + chr4_3:10320893-10320912 Msa0629460:CDS 50.0%
CAGCCAGGTCATCACTATTG+CGG - chr4_3:10321053-10321072 None:intergenic 50.0%
GTAGGAGGAACTAACAGGTG+TGG - chr4_3:10321196-10321215 None:intergenic 50.0%
AAGTCACATGCTGGGAGCTT+TGG + chr4_3:10322094-10322113 Msa0629460:intron 50.0%
!! CTTGGATGGTGATGGGTATC+TGG + chr4_3:10322925-10322944 Msa0629460:CDS 50.0%
TAAGCGAGTAGCAGAGAAGC+AGG - chr4_3:10323015-10323034 None:intergenic 50.0%
GAAATGGCCGAGATTCAAGC+AGG + chr4_3:10323595-10323614 Msa0629460:CDS 50.0%
GGAGAAGCCGGAGACTATAA+TGG + chr4_3:10324006-10324025 Msa0629460:intron 50.0%
TCACCAATAGTTGGAGCCTG+TGG - chr4_3:10324484-10324503 None:intergenic 50.0%
! ATTGGTGATATCGACGGGGA+TGG + chr4_3:10324496-10324515 Msa0629460:CDS 50.0%
GGAAGGGATGGATCACCTAT+TGG + chr4_3:10324571-10324590 Msa0629460:CDS 50.0%
GGGATGGATCACCTATTGGA+CGG + chr4_3:10324575-10324594 Msa0629460:CDS 50.0%
AGCCTGTAGGTCCATCAATG+AGG - chr4_3:10324720-10324739 None:intergenic 50.0%
ACAACATCAGCACAGCCTGT+AGG - chr4_3:10324733-10324752 None:intergenic 50.0%
GGCAGACAATGTAGATGGTG+GGG + chr4_3:10324888-10324907 Msa0629460:CDS 50.0%
GCATGGAGATTGCCTAACCA+AGG + chr4_3:10325061-10325080 Msa0629460:CDS 50.0%
TCATCACGGAAAGCCCTTGA+AGG - chr4_3:10325139-10325158 None:intergenic 50.0%
TTCAAGGGCTTTCCGTGATG+AGG + chr4_3:10325138-10325157 Msa0629460:CDS 50.0%
GTAATTGCCAGGGACAAGCA+AGG - chr4_3:10325350-10325369 None:intergenic 50.0%
CTTGTCCCTGGCAATTACCA+AGG + chr4_3:10325352-10325371 Msa0629460:CDS 50.0%
! CTCTCTCCTTGGTAATTGCC+AGG - chr4_3:10325361-10325380 None:intergenic 50.0%
CTCGACCAAAACTGTTCCTG+TGG - chr4_3:10325458-10325477 None:intergenic 50.0%
GTGAAGCGATGGGTGCTCTT+TGG - chr4_3:10317723-10317742 None:intergenic 55.0%
! ATCCTCCGTTTTCGCAGAGG+AGG + chr4_3:10317928-10317947 Msa0629460:CDS 55.0%
ATCCTCCTCTGCGAAAACGG+AGG - chr4_3:10317933-10317952 None:intergenic 55.0%
GAAGCCACCGATGATGCACT+CGG + chr4_3:10317983-10318002 Msa0629460:CDS 55.0%
GTAACCGAGTGCATCATCGG+TGG - chr4_3:10317990-10318009 None:intergenic 55.0%
CGGTGCCCTCAAGAACTTCA+AGG - chr4_3:10318684-10318703 None:intergenic 55.0%
!! GAAGTTCTTGAGGGCACCGA+TGG + chr4_3:10318685-10318704 Msa0629460:CDS 55.0%
ACAAGGAGCCATTCCGCCTA+TGG - chr4_3:10319334-10319353 None:intergenic 55.0%
TACGAAAGGGTGGTCTGCAG+AGG + chr4_3:10319839-10319858 Msa0629460:intron 55.0%
ACAAGCTTGAGGTCCCACGT+AGG + chr4_3:10320235-10320254 Msa0629460:CDS 55.0%
!! TGCTGGGAGCTTTGGAGATG+TGG + chr4_3:10322102-10322121 Msa0629460:intron 55.0%
GTTGTTGCATGGACCCCCAA+AGG + chr4_3:10323685-10323704 Msa0629460:CDS 55.0%
!! CCTTGTCGAGAGCACCACTT+TGG - chr4_3:10323970-10323989 None:intergenic 55.0%
CCAAAGTGGTGCTCTCGACA+AGG + chr4_3:10323967-10323986 Msa0629460:intron 55.0%
TTGAGGGGATGGTGAGGTGA+GGG - chr4_3:10324970-10324989 None:intergenic 55.0%
GCAAATCGGTACGGTCGTGA+AGG + chr4_3:10325097-10325116 Msa0629460:CDS 55.0%
AGGGCTTTCCGTGATGAGGA+AGG + chr4_3:10325142-10325161 Msa0629460:CDS 55.0%
CAGACTTCCTTGCTTGTCCC+TGG + chr4_3:10325340-10325359 Msa0629460:intron 55.0%
AGCTGCCAACTGTGGGAGTA+AGG + chr4_3:10325431-10325450 Msa0629460:CDS 55.0%
GTGGTCCTTACTCCCACAGT+TGG - chr4_3:10325439-10325458 None:intergenic 55.0%
ACTGTGGGAGTAAGGACCAC+AGG + chr4_3:10325439-10325458 Msa0629460:CDS 55.0%
CTTGTCATCCTTCGCCCACA+AGG + chr4_3:10325595-10325614 Msa0629460:CDS 55.0%
TCAGGATGGGTACGGTCCAC+TGG - chr4_3:10320300-10320319 None:intergenic 60.0%
GTAGCAGAGAAGCAGGCTCC+AGG - chr4_3:10323008-10323027 None:intergenic 60.0%
CTTGAGGGGATGGTGAGGTG+AGG - chr4_3:10324971-10324990 None:intergenic 60.0%
CTCACCTCACCATCCCCTCA+AGG + chr4_3:10324969-10324988 Msa0629460:CDS 60.0%
CCTACCTTGAGGGGATGGTG+AGG - chr4_3:10324976-10324995 None:intergenic 60.0%
CCTCACCATCCCCTCAAGGT+AGG + chr4_3:10324973-10324992 Msa0629460:intron 60.0%
! GCAATGGCACTGGGCCTTGT+GGG - chr4_3:10325612-10325631 None:intergenic 60.0%
CCTGAGCTCAATGGTGTGCC+TGG - chr4_3:10325684-10325703 None:intergenic 60.0%
CCAGGCACACCATTGAGCTC+AGG + chr4_3:10325681-10325700 Msa0629460:three_prime_UTR 60.0%
AAAGCTCACTGCGGCACCCA+GGG - chr4_3:10325742-10325761 None:intergenic 60.0%
! TAGCATTGGGAGGCGGCTGC+TGG + chr4_3:10320900-10320919 Msa0629460:CDS 65.0%
! GGCAATGGCACTGGGCCTTG+TGG - chr4_3:10325613-10325632 None:intergenic 65.0%
CAAAGCTCACTGCGGCACCC+AGG - chr4_3:10325743-10325762 None:intergenic 65.0%
! GCACTGGGCCTTGTGGGCGA+AGG - chr4_3:10325606-10325625 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 10317568 10326151 10317568 ID=Msa0629460;Name=Msa0629460
chr4_3 mRNA 10317568 10326151 10317568 ID=Msa0629460-mRNA-1;Parent=Msa0629460;Name=Msa0629460-mRNA-1;_AED=0.06;_eAED=0.06;_QI=301|1|1|1|1|1|13|494|876
chr4_3 exon 10317568 10318017 10317568 ID=Msa0629460-mRNA-1:exon:3145;Parent=Msa0629460-mRNA-1
chr4_3 exon 10318100 10318210 10318100 ID=Msa0629460-mRNA-1:exon:3146;Parent=Msa0629460-mRNA-1
chr4_3 exon 10318639 10318721 10318639 ID=Msa0629460-mRNA-1:exon:3147;Parent=Msa0629460-mRNA-1
chr4_3 exon 10319995 10320112 10319995 ID=Msa0629460-mRNA-1:exon:3148;Parent=Msa0629460-mRNA-1
chr4_3 exon 10320212 10320372 10320212 ID=Msa0629460-mRNA-1:exon:3149;Parent=Msa0629460-mRNA-1
chr4_3 exon 10320602 10321200 10320602 ID=Msa0629460-mRNA-1:exon:3150;Parent=Msa0629460-mRNA-1
chr4_3 exon 10321314 10321384 10321314 ID=Msa0629460-mRNA-1:exon:3151;Parent=Msa0629460-mRNA-1
chr4_3 exon 10322742 10322998 10322742 ID=Msa0629460-mRNA-1:exon:3152;Parent=Msa0629460-mRNA-1
chr4_3 exon 10323569 10323750 10323569 ID=Msa0629460-mRNA-1:exon:3153;Parent=Msa0629460-mRNA-1
chr4_3 exon 10324487 10324770 10324487 ID=Msa0629460-mRNA-1:exon:3154;Parent=Msa0629460-mRNA-1
chr4_3 exon 10324873 10324990 10324873 ID=Msa0629460-mRNA-1:exon:3155;Parent=Msa0629460-mRNA-1
chr4_3 exon 10325061 10325243 10325061 ID=Msa0629460-mRNA-1:exon:3156;Parent=Msa0629460-mRNA-1
chr4_3 exon 10325343 10326151 10325343 ID=Msa0629460-mRNA-1:exon:3157;Parent=Msa0629460-mRNA-1
chr4_3 five_prime_UTR 10317568 10317868 10317568 ID=Msa0629460-mRNA-1:five_prime_utr;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10317869 10318017 10317869 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10318100 10318210 10318100 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10318639 10318721 10318639 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10319995 10320112 10319995 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10320212 10320372 10320212 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10320602 10321200 10320602 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10321314 10321384 10321314 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10322742 10322998 10322742 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10323569 10323750 10323569 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10324487 10324770 10324487 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10324873 10324990 10324873 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10325061 10325243 10325061 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 CDS 10325343 10325657 10325343 ID=Msa0629460-mRNA-1:cds;Parent=Msa0629460-mRNA-1
chr4_3 three_prime_UTR 10325658 10326151 10325658 ID=Msa0629460-mRNA-1:three_prime_utr;Parent=Msa0629460-mRNA-1
Gene Sequence

>Msa0629460

ATGAAACCCTTTTCATCCAAAAAAGTTCTTCTTTTTCTTCTTCTACTCTCCACTTTTTCATCCTCCGTTTTCGCAGAGGAGGATACCAAGAAGAATAATACGTTTCGGGAACGTGAAGCCACCGATGATGCACTCGGTTACCCAGAAATAGATGAAGATGCTTTGGTGAATTCGAAATGTCCTGTGAATTTAGAGCTAAGATGGCAAACGGAAGTTAGTTCTAGTGTTTATGCAAATCCCTTGATTGCTGATATTAACAGTGATGGGAAGCTTGACATAGTGGTTCCCTCTTTTGTTCACTACCTTGAAGTTCTTGAGGGCACCGATGGAGACAAAATGCCAGGCTGGCCTGCTTTCCACCAATCGACTGTGCATTCTAGTCCACTTCTATATGACATAGACAAAGATGGCGTGAGAGAAATAGCTTTGGCAACCTACAATGGTGAAGTGCTATTTTTCAGGGTTTCCGGCTATATCATGTCAGACAAGCTTGAGGTCCCACGTAGGAAAGTGCTTAAAAATTGGTATGTGGGTTTGAATAAGGATCCAGTGGACCGTACCCATCCTGATGTTCATGATGACCAACTTGTCCAAGAAGCTACTATCGCGAATTCTATGTCCCAAATGAATGGAAGCCGACACGAAGTTAATTCCTCAGCTTCCACATCAACAGAAAGTCACCCTGACACAAAAAGCGTGTCTAATCCAGAGCCTGAAAAGAAAATAAATGGAAGCCAATCAGAGGAGAGTATTAACACATCAACAGAAAGTCACCCTGATACAAAAAATGTGTCTAATCCAGAGCCTGAAAAGAAAGTAAATGGAAGCCAATCAGAGGAGGGTATTAAGATGCCAACAGTTGCTGATAATTCATCTGTCAGTGCTGGTTCTGTGGAGACTGTTAATGCAGACAACAAGACTAGCATTGGGAGGCGGCTGCTGGAAGATAACAACTTAAAAGGAGCTGAGCAAGTTGGTTCTGAATCCAAAGGTAAGGAAGAAGTTCATGCTGCAACTGTGGAAAATGAGGAAGGACTGGAAGCAGATGCTGATTCATCTTTTGAGTTATTCCGCAATAGTGATGACCTGGCTGATGAGTACAACTATGATTATGATGATTATGTTGATGAATCATTGTGGGGTGATGAAGAATGGATTGAAGGGAAGCATGAGAAATTAGAGGATTACGTGAATGTTGACTCACACATCTTGTCCACACCTGTCATTGCAGATATTGACAATGATGGCGTAATGGAAATGGTTGTTGCTGTTTCTTATTTTTTTGACCAAGAGTATTATGACAACCAGGAGCATATGAAAGAATTGGGCGATATTGACATTGGGAAATATGTTGCTGGTGGTATTGTTGTTTTTAATCTGGACACAAAACAAGTCAAGTGGACTGCAGAACTTGATATGAGTACAGATACAGCAAACTTCCGAGCGTACGTATATTCTTCTCCAACTGTTGTAGACTTGGATGGTGATGGGTATCTGGACATTCTTGTTGGAACTTCTTATGGCCTATTCTATGTGTTAGATCATCATGGTAAAGTTAGAGAGAAGTTCCCTCTTGAAATGGCCGAGATTCAAGCAGGTGTTGTTGCAGCTGATATTAATGATGATGGAAAAATTGAGCTAGTTACTGCTGATACCCATGGAAATGTTGTTGCATGGACCCCCAAAGGAGATATGATTTGGGAAAAGCATCTGAAGAGTCTTATTCCACATGCTCCAACTATTGGTGATATCGACGGGGATGGCCGTACTGAGCTTGTTGTACCAACACTATCTGGGAAGATTCATGTTCTTGATGGAAGGGATGGATCACCTATTGGACGGTACCCATTTATAACTCATGGAAGAATAATGAATCAAATTCTTCTTGTTGATTTAAGTAAACAGAAGGAAAAGAAGAAGGGATTGACCCTTGTTACCTCTTCGTTTGATGGTTATTTGTACCTCATTGATGGACCTACAGGCTGTGCTGATGTTGTTGACATTGGTGAAACTTCATATAGCATGGTCTTGGCAGACAATGTAGATGGTGGGGATGATCTTGATCTGATTGTCTCGACAATGAATGGCAACGTCTTCTGCTTCTCGACTCCCTCACCTCACCATCCCCTCAAGGCATGGAGATTGCCTAACCAAGGAAGAAATAATGTTGCAAATCGGTACGGTCGTGAAGGCATCTATGTAACTCATCCTTCAAGGGCTTTCCGTGATGAGGAAGGAAAGAGTTTTTTTGTGGAAATTGAGATTGTAGATAATTATAGATACCCATCTGGTCATCAAGGACCATACCATGTCACTACTTCCTTGCTTGTCCCTGGCAATTACCAAGGAGAGAGAACAATAAAGCAGAACCAGACCTATTATCAGCCTGGTAAACATCGAATTAAGCTGCCAACTGTGGGAGTAAGGACCACAGGAACAGTTTTGGTCGAGATGGTTGACAAAAATGGACTCTATTTCTCTGATGAATTCTCTCTTACATTCCATATGCACTACTATAAATTGTTGAAGTGGCTTCTTGTTCTTCCAATGCTTGGGATGTTTGGTGTGCTTGTCATCCTTCGCCCACAAGGCCCAGTGCCATTGCCATCATTTTCAAGGAACAACGATTAG
Protein sequence

>Msa0629460

MKPFSSKKVLLFLLLLSTFSSSVFAEEDTKKNNTFREREATDDALGYPEIDEDALVNSKCPVNLELRWQTEVSSSVYANPLIADINSDGKLDIVVPSFVHYLEVLEGTDGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYIMSDKLEVPRRKVLKNWYVGLNKDPVDRTHPDVHDDQLVQEATIANSMSQMNGSRHEVNSSASTSTESHPDTKSVSNPEPEKKINGSQSEESINTSTESHPDTKNVSNPEPEKKVNGSQSEEGIKMPTVADNSSVSAGSVETVNADNKTSIGRRLLEDNNLKGAEQVGSESKGKEEVHAATVENEEGLEADADSSFELFRNSDDLADEYNYDYDDYVDESLWGDEEWIEGKHEKLEDYVNVDSHILSTPVIADIDNDGVMEMVVAVSYFFDQEYYDNQEHMKELGDIDIGKYVAGGIVVFNLDTKQVKWTAELDMSTDTANFRAYVYSSPTVVDLDGDGYLDILVGTSYGLFYVLDHHGKVREKFPLEMAEIQAGVVAADINDDGKIELVTADTHGNVVAWTPKGDMIWEKHLKSLIPHAPTIGDIDGDGRTELVVPTLSGKIHVLDGRDGSPIGRYPFITHGRIMNQILLVDLSKQKEKKKGLTLVTSSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDLDLIVSTMNGNVFCFSTPSPHHPLKAWRLPNQGRNNVANRYGREGIYVTHPSRAFRDEEGKSFFVEIEIVDNYRYPSGHQGPYHVTTSLLVPGNYQGERTIKQNQTYYQPGKHRIKLPTVGVRTTGTVLVEMVDKNGLYFSDEFSLTFHMHYYKLLKWLLVLPMLGMFGVLVILRPQGPVPLPSFSRNND*