Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0634060 | XP_013455135.1 | 98.467 | 261 | 4 | 0 | 1 | 261 | 1 | 261 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0634060 | sp|Q5PP62|SPX3_ARATH | 61.597 | 263 | 79 | 5 | 1 | 260 | 1 | 244 | 3.65e-104 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0634060 | A0A072UJ94 | 98.467 | 261 | 4 | 0 | 1 | 261 | 1 | 261 | 0.0 | 526 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0537530 | Msa0634060 | 0.948879 | 3.918926e-107 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0634060 | MtrunA17_Chr4g0012631 | 98.467 | 261 | 4 | 0 | 1 | 261 | 1 | 261 | 0.0 | 526 |
| Msa0634060 | MtrunA17_Chr4g0063731 | 50.538 | 279 | 86 | 6 | 1 | 241 | 1 | 265 | 5.55e-75 | 229 |
| Msa0634060 | MtrunA17_Chr1g0149301 | 45.000 | 280 | 103 | 7 | 1 | 242 | 1 | 267 | 2.27e-68 | 212 |
| Msa0634060 | MtrunA17_Chr8g0372781 | 41.852 | 270 | 128 | 4 | 1 | 241 | 1 | 270 | 6.95e-65 | 204 |
| Msa0634060 | MtrunA17_Chr3g0137851 | 46.063 | 254 | 103 | 5 | 1 | 235 | 1 | 239 | 1.75e-63 | 199 |
| Msa0634060 | MtrunA17_Chr7g0231141 | 57.143 | 91 | 36 | 2 | 135 | 225 | 5 | 92 | 1.79e-26 | 99.4 |
| Msa0634060 | MtrunA17_Chr7g0231151 | 55.422 | 83 | 26 | 1 | 1 | 83 | 1 | 72 | 1.21e-21 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0634060 | AT2G45130.1 | 61.597 | 263 | 79 | 5 | 1 | 260 | 1 | 244 | 3.71e-105 | 305 |
| Msa0634060 | AT5G20150.1 | 52.941 | 255 | 99 | 3 | 1 | 247 | 1 | 242 | 7.53e-82 | 246 |
| Msa0634060 | AT2G26660.1 | 45.324 | 278 | 102 | 5 | 1 | 241 | 1 | 265 | 1.73e-72 | 224 |
| Msa0634060 | AT5G15330.1 | 40.484 | 289 | 121 | 5 | 1 | 241 | 1 | 286 | 4.19e-64 | 203 |
| Msa0634060 | AT5G15330.2 | 40.484 | 289 | 121 | 5 | 1 | 241 | 70 | 355 | 1.93e-63 | 204 |
Find 43 sgRNAs with CRISPR-Local
Find 569 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGAGAGTAGTTGATTTA+TGG | 0.123610 | 4_3:-20678751 | Msa0634060:CDS |
| TATTAAATCGGTTGTGAAAA+AGG | 0.191039 | 4_3:+20673101 | None:intergenic |
| CGGAAACACTGCATCGATTA+TGG | 0.197845 | 4_3:+20673053 | None:intergenic |
| CATAATCGATGCAGTGTTTC+CGG | 0.213369 | 4_3:-20673052 | Msa0634060:CDS |
| CAGCATTAAGCTGAAATAAT+TGG | 0.251302 | 4_3:+20672854 | None:intergenic |
| TCATTGCTAAATGGTTCAAT+TGG | 0.324342 | 4_3:-20683878 | Msa0634060:CDS |
| TGCTGCTGTTCCAATTGTTT+AGG | 0.325418 | 4_3:-20672836 | None:intergenic |
| CAAGAGAGTAGTTGATTTAT+GGG | 0.330113 | 4_3:-20678750 | Msa0634060:CDS |
| TAAGTTCAATGGATTCTTCA+TGG | 0.343337 | 4_3:-20683804 | Msa0634060:CDS |
| TTTGTAACATTATGAAATTT+GGG | 0.384253 | 4_3:-20684009 | None:intergenic |
| TCTGAAGGTTGACTACCATT+TGG | 0.385458 | 4_3:+20678725 | None:intergenic |
| AATGAGATTGATAAGTTCAA+TGG | 0.385635 | 4_3:-20683815 | Msa0634060:CDS |
| GCACCAACATCATTGCTAAA+TGG | 0.386868 | 4_3:-20683887 | Msa0634060:CDS |
| CACGAGTTTCGATATTAAAT+CGG | 0.396690 | 4_3:+20673089 | None:intergenic |
| ATATTTGGATCCTAAACAAT+TGG | 0.403412 | 4_3:+20672826 | None:intergenic |
| AGCAGATTATAAGGAGGAAA+TGG | 0.405461 | 4_3:-20678702 | Msa0634060:CDS |
| ACCTTCAGAAGCAGATTATA+AGG | 0.405825 | 4_3:-20678711 | Msa0634060:CDS |
| TTCAAGATACTTTGCCAGAA+TGG | 0.415009 | 4_3:-20683967 | Msa0634060:CDS |
| CGATGCAGTGTTTCCGGTCG+AGG | 0.430694 | 4_3:-20673046 | Msa0634060:CDS |
| CTAAATGGTTCAATTGGGTA+TGG | 0.441996 | 4_3:-20683872 | Msa0634060:CDS |
| AGAAGCAAAAGAAGCTATAG+TGG | 0.443949 | 4_3:-20673004 | Msa0634060:CDS |
| GGATTTCATTATCCGACATA+AGG | 0.447163 | 4_3:-20683771 | Msa0634060:intron |
| CTTTCAGCTTCTTCCTCGAC+CGG | 0.451775 | 4_3:+20673033 | None:intergenic |
| TCCTTATAATCTGCTTCTGA+AGG | 0.457313 | 4_3:+20678710 | None:intergenic |
| TATAGCAACATTAACTATAC+AGG | 0.462115 | 4_3:-20678623 | Msa0634060:intron |
| TGGGAAGAGACTCAAGCAAC+AGG | 0.471625 | 4_3:-20683990 | Msa0634060:CDS |
| AATTGGATGAGATCAGAATC+TGG | 0.480120 | 4_3:+20672871 | None:intergenic |
| CATTGCTAAATGGTTCAATT+GGG | 0.483411 | 4_3:-20683877 | Msa0634060:CDS |
| GTTGATTTATGGGGACCAAA+TGG | 0.503225 | 4_3:-20678740 | Msa0634060:CDS |
| AATTTAGTATTACCTTATGT+CGG | 0.519716 | 4_3:+20683759 | None:intergenic |
| ACAATGCAAGAAATGAGAAA+AGG | 0.524951 | 4_3:-20672937 | Msa0634060:CDS |
| TGGATTCTTCATGGAACAAG+AGG | 0.542792 | 4_3:-20683795 | Msa0634060:CDS |
| AAAGAAGCTATAGTGGTAGC+TGG | 0.544823 | 4_3:-20672997 | Msa0634060:CDS |
| GCTATAGTGGTAGCTGGTGA+AGG | 0.574524 | 4_3:-20672991 | Msa0634060:CDS |
| GAACCATTTAGCAATGATGT+TGG | 0.587784 | 4_3:+20683884 | None:intergenic |
| ATTCTTCATGGAACAAGAGG+AGG | 0.589121 | 4_3:-20683792 | Msa0634060:CDS |
| TTTAATATCGAAACTCGTGA+AGG | 0.612907 | 4_3:-20673085 | Msa0634060:CDS |
| TCAGAATCTGGCAAATTGAG+AGG | 0.614160 | 4_3:+20672883 | None:intergenic |
| AAGTATGACAAGAGGACAGG+AGG | 0.628750 | 4_3:-20673165 | Msa0634060:CDS |
| AAGAGAGTAGTTGATTTATG+GGG | 0.634787 | 4_3:-20678749 | Msa0634060:CDS |
| AATTGGGTATGGAAAATCTG+AGG | 0.650477 | 4_3:-20683861 | Msa0634060:CDS |
| TTCAGAAGCAGATTATAAGG+AGG | 0.663220 | 4_3:-20678708 | Msa0634060:CDS |
| GAATCTGGCAAATTGAGAGG+AGG | 0.664600 | 4_3:+20672886 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATAATTATTATATAT+GGG | + | chr4_3:20680280-20680299 | None:intergenic | 0.0% |
| !!! | TTTAAAATAATTATTATATA+TGG | + | chr4_3:20680281-20680300 | None:intergenic | 0.0% |
| !!! | AATCTTTAAAAAAGAATATT+TGG | + | chr4_3:20673155-20673174 | None:intergenic | 10.0% |
| !!! | AATATTCTTTTTTAAAGATT+TGG | - | chr4_3:20673155-20673174 | Msa0634060:CDS | 10.0% |
| !!! | TTTTAGTCAATTATTAAATA+TGG | + | chr4_3:20674183-20674202 | None:intergenic | 10.0% |
| !!! | ATTTTAAGAAAAAAAGAAAA+AGG | - | chr4_3:20674340-20674359 | Msa0634060:intron | 10.0% |
| !! | AAAAATATAATTATTGAGTA+GGG | + | chr4_3:20675050-20675069 | None:intergenic | 10.0% |
| !! | AAAAAATATAATTATTGAGT+AGG | + | chr4_3:20675051-20675070 | None:intergenic | 10.0% |
| !!! | ATACAATTTTTTTTTATTAG+GGG | - | chr4_3:20675579-20675598 | Msa0634060:intron | 10.0% |
| !!! | AAATATAAAAAGGATAATTT+TGG | + | chr4_3:20675871-20675890 | None:intergenic | 10.0% |
| !!! | TTATATTATTTTTCAAGTAA+TGG | + | chr4_3:20676533-20676552 | None:intergenic | 10.0% |
| !! | TGAAAAACAAATTATTAAAA+AGG | - | chr4_3:20676794-20676813 | Msa0634060:intron | 10.0% |
| !!! | CTATATATTTTTACTTTTAT+AGG | + | chr4_3:20676864-20676883 | None:intergenic | 10.0% |
| !! | CTATAAAAGTAAAAATATAT+AGG | - | chr4_3:20676862-20676881 | Msa0634060:intron | 10.0% |
| !!! | AAATTGAAAAATGAATATTT+TGG | - | chr4_3:20678008-20678027 | Msa0634060:intron | 10.0% |
| !! | AAGTAAATAATTAATATACA+CGG | + | chr4_3:20680082-20680101 | None:intergenic | 10.0% |
| !!! | TAATTATTTTAAATTGTTAG+CGG | - | chr4_3:20680288-20680307 | Msa0634060:intron | 10.0% |
| !! | AATAAGAAAAAATAAATAAC+AGG | - | chr4_3:20680493-20680512 | Msa0634060:intron | 10.0% |
| !!! | TTTTTACAATGAATAAAAAT+TGG | - | chr4_3:20681284-20681303 | Msa0634060:intron | 10.0% |
| !! | TAATATGAAGTTGAAATATA+AGG | - | chr4_3:20673182-20673201 | Msa0634060:CDS | 15.0% |
| !!! | AAGAATTCTTGATTATTTTT+AGG | + | chr4_3:20673278-20673297 | None:intergenic | 15.0% |
| !!! | TAAAGAATTCTTCTTTTTTA+AGG | + | chr4_3:20673309-20673328 | None:intergenic | 15.0% |
| !! | TATTAAAATCTTCATTGTTT+AGG | - | chr4_3:20673795-20673814 | Msa0634060:intron | 15.0% |
| !! | TATATAAAATATTTGCTCAA+GGG | + | chr4_3:20674208-20674227 | None:intergenic | 15.0% |
| !! | ATATATAAAATATTTGCTCA+AGG | + | chr4_3:20674209-20674228 | None:intergenic | 15.0% |
| !! | AAAATGTAAACAACAATAAT+AGG | - | chr4_3:20674407-20674426 | Msa0634060:intron | 15.0% |
| !!! | TTTTGTTTATAGATTCTTTA+TGG | - | chr4_3:20675251-20675270 | Msa0634060:intron | 15.0% |
| !!! | TACAATTTTTTTTTATTAGG+GGG | - | chr4_3:20675580-20675599 | Msa0634060:intron | 15.0% |
| !! | TATTACACTCAAATATAAAA+AGG | + | chr4_3:20675881-20675900 | None:intergenic | 15.0% |
| !! | AGATATTACATATTATTTGT+AGG | - | chr4_3:20675919-20675938 | Msa0634060:intron | 15.0% |
| !! | GATATTACATATTATTTGTA+GGG | - | chr4_3:20675920-20675939 | Msa0634060:intron | 15.0% |
| !! | ATATTACATATTATTTGTAG+GGG | - | chr4_3:20675921-20675940 | Msa0634060:intron | 15.0% |
| !!! | TAGAGATTATTTTTTTGTTT+TGG | + | chr4_3:20676022-20676041 | None:intergenic | 15.0% |
| !!! | ATTTATTTTCTTCATTGAAT+TGG | - | chr4_3:20676159-20676178 | Msa0634060:intron | 15.0% |
| !! | TGTTAGAAAATTAAGTTTAA+TGG | - | chr4_3:20676459-20676478 | Msa0634060:intron | 15.0% |
| !! | AGCTTAAAAATTAAGTTTAA+TGG | - | chr4_3:20676482-20676501 | Msa0634060:intron | 15.0% |
| !!! | AATAATATAAGTTTTTTTGG+TGG | - | chr4_3:20676543-20676562 | Msa0634060:intron | 15.0% |
| !! | TTCATAGTTTATCAATTATT+CGG | - | chr4_3:20677184-20677203 | Msa0634060:intron | 15.0% |
| !! | AAGTACATTAATTTATAATG+AGG | - | chr4_3:20677297-20677316 | Msa0634060:intron | 15.0% |
| !! | AAAAAAAAAAAGACTGAAAT+AGG | + | chr4_3:20677525-20677544 | None:intergenic | 15.0% |
| !! | AAGAAATAAATAAACTATGA+AGG | + | chr4_3:20677924-20677943 | None:intergenic | 15.0% |
| !! | TGTAAATAAATAAAATGCAT+GGG | + | chr4_3:20678787-20678806 | None:intergenic | 15.0% |
| !! | TTGTAAATAAATAAAATGCA+TGG | + | chr4_3:20678788-20678807 | None:intergenic | 15.0% |
| !! | CTAAATTAAGTTTGATATAT+GGG | + | chr4_3:20678945-20678964 | None:intergenic | 15.0% |
| !! | ACTAAATTAAGTTTGATATA+TGG | + | chr4_3:20678946-20678965 | None:intergenic | 15.0% |
| !!! | ATTAATTATTTTTTTCTCCA+AGG | + | chr4_3:20680404-20680423 | None:intergenic | 15.0% |
| !!! | TTTTCTTGGTATTTATATTT+GGG | + | chr4_3:20680559-20680578 | None:intergenic | 15.0% |
| !!! | ATTTTCTTGGTATTTATATT+TGG | + | chr4_3:20680560-20680579 | None:intergenic | 15.0% |
| !! | TATCAAATCATAATTACAAA+AGG | - | chr4_3:20680746-20680765 | Msa0634060:intron | 15.0% |
| !!! | ACTTTATTTATGTTATGTAA+AGG | + | chr4_3:20681324-20681343 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGTATAATGTTG+TGG | + | chr4_3:20681636-20681655 | None:intergenic | 15.0% |
| !! | AATAATAATAGAAAAAACAG+TGG | + | chr4_3:20681672-20681691 | None:intergenic | 15.0% |
| !!! | TTTTTTAAGAAAAAGTTGAT+GGG | + | chr4_3:20681773-20681792 | None:intergenic | 15.0% |
| !!! | TTTTTTTAAGAAAAAGTTGA+TGG | + | chr4_3:20681774-20681793 | None:intergenic | 15.0% |
| !!! | AGGTTAAGTTTTTTTTTTTT+TGG | + | chr4_3:20681890-20681909 | None:intergenic | 15.0% |
| !!! | AAAAAAGTGATGAATTTTAA+AGG | + | chr4_3:20682072-20682091 | None:intergenic | 15.0% |
| !! | AAATAAAACAATGAATAAGT+GGG | + | chr4_3:20682700-20682719 | None:intergenic | 15.0% |
| !!! | AGACAAATTTTTGTCATATA+AGG | - | chr4_3:20672893-20672912 | Msa0634060:CDS | 20.0% |
| !! | AATTTAGTATTACCTTATGT+CGG | + | chr4_3:20673079-20673098 | None:intergenic | 20.0% |
| !!! | TTTTGATAACTTAGAATGTA+AGG | - | chr4_3:20673215-20673234 | Msa0634060:intron | 20.0% |
| !!! | TATTATTTGTAGCTTTTGTT+TGG | - | chr4_3:20673639-20673658 | Msa0634060:intron | 20.0% |
| !! | TTGTAAAAGTTTGTAAAAGA+TGG | + | chr4_3:20673725-20673744 | None:intergenic | 20.0% |
| !!! | ATTTTAATAAGTTGATGATG+AGG | + | chr4_3:20673784-20673803 | None:intergenic | 20.0% |
| !!! | TTGATTTTTCCATCAAATAT+TGG | - | chr4_3:20674440-20674459 | Msa0634060:intron | 20.0% |
| !! | ATGTTGGTATGTAATATATT+TGG | + | chr4_3:20675438-20675457 | None:intergenic | 20.0% |
| !! | TTTCATATGATAAACAATGA+AGG | + | chr4_3:20675645-20675664 | None:intergenic | 20.0% |
| !!! | GTATGTACTTTAAATTTTGT+TGG | - | chr4_3:20675753-20675772 | Msa0634060:intron | 20.0% |
| !!! | CTCTAGTTTTTTTTTTTTTG+AGG | - | chr4_3:20676037-20676056 | Msa0634060:intron | 20.0% |
| !! | ATTTGAATTGCTTAAAACTA+TGG | - | chr4_3:20676404-20676423 | Msa0634060:intron | 20.0% |
| !! | TTTGAATTGCTTAAAACTAT+GGG | - | chr4_3:20676405-20676424 | Msa0634060:intron | 20.0% |
| !! | ATGCATAAAAAAAATATGCA+AGG | + | chr4_3:20676591-20676610 | None:intergenic | 20.0% |
| !!! | GAAAACACATGTTTTATTTA+CGG | - | chr4_3:20676637-20676656 | Msa0634060:intron | 20.0% |
| !! | CATTAATTTATAATGAGGTA+AGG | - | chr4_3:20677302-20677321 | Msa0634060:intron | 20.0% |
| !!! | AAGGATAATATTTTGCTTTT+TGG | + | chr4_3:20677905-20677924 | None:intergenic | 20.0% |
| !!! | TATGATCATGATTTTACAAT+TGG | - | chr4_3:20678032-20678051 | Msa0634060:intron | 20.0% |
| !!! | TGAAATACATAATTTTCGAA+AGG | - | chr4_3:20678316-20678335 | Msa0634060:intron | 20.0% |
| !!! | GAAATACATAATTTTCGAAA+GGG | - | chr4_3:20678317-20678336 | Msa0634060:intron | 20.0% |
| !! | CGTAAATATATAAAATGCAT+AGG | + | chr4_3:20679275-20679294 | None:intergenic | 20.0% |
| !! | ATCGTAAATAAAAAAATGCA+CGG | + | chr4_3:20679511-20679530 | None:intergenic | 20.0% |
| !! | GATATCAAAGTTAATTTAGT+CGG | - | chr4_3:20679668-20679687 | Msa0634060:intron | 20.0% |
| !! | CGTAAATATATAAAATGCAT+GGG | + | chr4_3:20679275-20679294 | None:intergenic | 20.0% |
| !! | TCGTAAATATATAAAATGCA+TGG | + | chr4_3:20679276-20679295 | None:intergenic | 20.0% |
| !! | TAGTAATAATTATTATGCAC+AGG | + | chr4_3:20680234-20680253 | None:intergenic | 20.0% |
| !! | AAATAATTAATTGAGTTCCT+TGG | - | chr4_3:20680384-20680403 | Msa0634060:intron | 20.0% |
| !! | AAAAAATAAATAACAGGCAT+GGG | - | chr4_3:20680499-20680518 | Msa0634060:intron | 20.0% |
| !! | TGTAATTATGATTTGATAGA+AGG | + | chr4_3:20680744-20680763 | None:intergenic | 20.0% |
| !! | TAAAATGTAAGTATCAAATC+TGG | - | chr4_3:20680940-20680959 | Msa0634060:intron | 20.0% |
| !!! | TACAATTTTAGAGATTTTTG+AGG | - | chr4_3:20681043-20681062 | Msa0634060:intron | 20.0% |
| !! | AAAAAAAAATCTAAGCCATA+TGG | - | chr4_3:20681145-20681164 | Msa0634060:intron | 20.0% |
| !! | AAAATTATGTTTACTTGGTT+AGG | + | chr4_3:20681854-20681873 | None:intergenic | 20.0% |
| !! | GATGAAAAATTATGTTTACT+TGG | + | chr4_3:20681859-20681878 | None:intergenic | 20.0% |
| !! | AAAAAAAATATATAACTCGC+CGG | + | chr4_3:20681984-20682003 | None:intergenic | 20.0% |
| !!! | GGAATTTTTTTTTTCTTAGT+AGG | + | chr4_3:20682218-20682237 | None:intergenic | 20.0% |
| !! | ATCTACATAAAATACATGTT+TGG | + | chr4_3:20682369-20682388 | None:intergenic | 20.0% |
| !! | TTACTAAAATCCAATAGAAA+TGG | - | chr4_3:20682457-20682476 | Msa0634060:intron | 20.0% |
| !!! | TTTTTTTCTTCCATTTCTAT+TGG | + | chr4_3:20682470-20682489 | None:intergenic | 20.0% |
| !! | AATGGAAGAAAAAAAAAGAA+AGG | - | chr4_3:20682475-20682494 | Msa0634060:intron | 20.0% |
| !! | AGTAAATGATAAGAAAACAT+GGG | + | chr4_3:20682513-20682532 | None:intergenic | 20.0% |
| !! | AAGTAAATGATAAGAAAACA+TGG | + | chr4_3:20682514-20682533 | None:intergenic | 20.0% |
| !! | GAAATAAAACAATGAATAAG+TGG | + | chr4_3:20682701-20682720 | None:intergenic | 20.0% |
| !! | AGAAACAATATACATATAAG+AGG | + | chr4_3:20682723-20682742 | None:intergenic | 20.0% |
| !! | TTAGTAGTCTAGAAAATTAT+AGG | + | chr4_3:20683436-20683455 | None:intergenic | 20.0% |
| !!! | AATTTTCTAGACTACTAAAT+AGG | - | chr4_3:20683438-20683457 | Msa0634060:intron | 20.0% |
| !!! | TCATAAATTTGTTTTCACTA+TGG | + | chr4_3:20683560-20683579 | None:intergenic | 20.0% |
| !!! | ACAAAAAAATCAATGTGTTT+TGG | + | chr4_3:20683628-20683647 | None:intergenic | 20.0% |
| !!! | AAACACATTGATTTTTTTGT+AGG | - | chr4_3:20683628-20683647 | Msa0634060:intron | 20.0% |
| !!! | AACACATTGATTTTTTTGTA+GGG | - | chr4_3:20683629-20683648 | Msa0634060:intron | 20.0% |
| ! | AATGAGATTGATAAGTTCAA+TGG | - | chr4_3:20673020-20673039 | Msa0634060:CDS | 25.0% |
| ! | TACAAATAATAGTTTCGAAC+TGG | + | chr4_3:20673630-20673649 | None:intergenic | 25.0% |
| ! | TAGTCATAAGAAAGATAATG+AGG | + | chr4_3:20673748-20673767 | None:intergenic | 25.0% |
| ! | TATTCTAACGAATATTCGAT+AGG | + | chr4_3:20673938-20673957 | None:intergenic | 25.0% |
| !!! | AAAGGATTGTTTTAGTTGTT+TGG | - | chr4_3:20674116-20674135 | Msa0634060:intron | 25.0% |
| ! | AAAGTGAAATAGAATGTTGA+AGG | - | chr4_3:20674147-20674166 | Msa0634060:intron | 25.0% |
| ! | ACATGTCTATATTGTTTCAA+TGG | - | chr4_3:20674283-20674302 | Msa0634060:intron | 25.0% |
| ! | ATGTAAACAACAATAATAGG+TGG | - | chr4_3:20674410-20674429 | Msa0634060:intron | 25.0% |
| ! | TGTAAACAACAATAATAGGT+GGG | - | chr4_3:20674411-20674430 | Msa0634060:intron | 25.0% |
| !!! | AAGGAAAGAAAGATTTTAGT+GGG | + | chr4_3:20674520-20674539 | None:intergenic | 25.0% |
| !! | TAAGGAAAGAAAGATTTTAG+TGG | + | chr4_3:20674521-20674540 | None:intergenic | 25.0% |
| ! | AAACAAACATACCCTAAAAA+TGG | - | chr4_3:20674618-20674637 | Msa0634060:intron | 25.0% |
| ! | AACAAACATACCCTAAAAAT+GGG | - | chr4_3:20674619-20674638 | Msa0634060:intron | 25.0% |
| !!! | AACAACTAAGCACTTTTTTT+GGG | - | chr4_3:20674664-20674683 | Msa0634060:intron | 25.0% |
| ! | CAACTAAGCACTTTAATATA+AGG | - | chr4_3:20674694-20674713 | Msa0634060:intron | 25.0% |
| !!! | AATTATTTTTAGTACCCATG+TGG | + | chr4_3:20674802-20674821 | None:intergenic | 25.0% |
| ! | CTTAATAAGCAGATATTAAG+CGG | - | chr4_3:20674883-20674902 | Msa0634060:intron | 25.0% |
| ! | AAATGGAGAACTTTGTTAAA+AGG | - | chr4_3:20675193-20675212 | Msa0634060:intron | 25.0% |
| ! | TGAAAAAAGAAAATGTTGAC+CGG | - | chr4_3:20675660-20675679 | Msa0634060:intron | 25.0% |
| ! | GTGTAATATAAAATCTCAGT+TGG | - | chr4_3:20675893-20675912 | Msa0634060:intron | 25.0% |
| ! | ATTATGCAAACTCATTTAAC+CGG | + | chr4_3:20676101-20676120 | None:intergenic | 25.0% |
| ! | AATTTAGTGATTTCTTACAC+TGG | - | chr4_3:20676302-20676321 | Msa0634060:intron | 25.0% |
| !!! | ATGTTTTTGACCCATATATT+CGG | + | chr4_3:20676381-20676400 | None:intergenic | 25.0% |
| ! | TTGAATTGCTTAAAACTATG+GGG | - | chr4_3:20676406-20676425 | Msa0634060:intron | 25.0% |
| !!! | GGGTTCATATAGTTATTTTT+GGG | - | chr4_3:20676426-20676445 | Msa0634060:intron | 25.0% |
| ! | TAAAAAAAATATGCAAGGTC+CGG | + | chr4_3:20676586-20676605 | None:intergenic | 25.0% |
| !!! | TCAAACATGTGTTTTGAATT+TGG | + | chr4_3:20676619-20676638 | None:intergenic | 25.0% |
| ! | GCATAAAAAAATGTTGAATC+CGG | - | chr4_3:20676715-20676734 | Msa0634060:intron | 25.0% |
| ! | CCTCAAAAAAATAATTCATC+CGG | + | chr4_3:20676737-20676756 | None:intergenic | 25.0% |
| !!! | CGGATGAATTATTTTTTTGA+GGG | - | chr4_3:20676735-20676754 | Msa0634060:intron | 25.0% |
| !! | TCAGAAAAGCAATTTTCAAT+AGG | + | chr4_3:20676905-20676924 | None:intergenic | 25.0% |
| !! | TTTGAAATTACAGGTACAAA+CGG | + | chr4_3:20677103-20677122 | None:intergenic | 25.0% |
| ! | CTTTATGATCATAAGATTGA+TGG | + | chr4_3:20677987-20678006 | None:intergenic | 25.0% |
| !!! | AAAGCTATTGTTGATTTTCA+TGG | - | chr4_3:20678167-20678186 | Msa0634060:intron | 25.0% |
| ! | TATAGCAACATTAACTATAC+AGG | - | chr4_3:20678212-20678231 | Msa0634060:intron | 25.0% |
| ! | TTGTACTCTCATGTATATTT+GGG | + | chr4_3:20678262-20678281 | None:intergenic | 25.0% |
| ! | ATTGTACTCTCATGTATATT+TGG | + | chr4_3:20678263-20678282 | None:intergenic | 25.0% |
| !! | TCAATTTTATCACGACTAAT+TGG | - | chr4_3:20678290-20678309 | Msa0634060:intron | 25.0% |
| ! | TGTGTTGAAGTAAATGAAAA+AGG | + | chr4_3:20678409-20678428 | None:intergenic | 25.0% |
| ! | AAATTGTAGATCTAAATGCA+CGG | + | chr4_3:20678746-20678765 | None:intergenic | 25.0% |
| ! | GATAAAATGCACATGATAAA+TGG | + | chr4_3:20678826-20678845 | None:intergenic | 25.0% |
| !! | TTTATCATGTGCATTTTATC+AGG | - | chr4_3:20678826-20678845 | Msa0634060:intron | 25.0% |
| !! | AATAGTATACACGTTTTATC+AGG | - | chr4_3:20678892-20678911 | Msa0634060:intron | 25.0% |
| ! | ACAAAAATAACTTTGGTACA+CGG | + | chr4_3:20679435-20679454 | None:intergenic | 25.0% |
| ! | TCGTAAATAAAAAAATGCAC+GGG | + | chr4_3:20679510-20679529 | None:intergenic | 25.0% |
| !! | GATAGTATAAACGTTTTATC+AGG | - | chr4_3:20679615-20679634 | Msa0634060:intron | 25.0% |
| !! | CTTCAATTTTTATGGTATAC+GGG | + | chr4_3:20680429-20680448 | None:intergenic | 25.0% |
| !! | CCTTCAATTTTTATGGTATA+CGG | + | chr4_3:20680430-20680449 | None:intergenic | 25.0% |
| ! | CGTATACCATAAAAATTGAA+GGG | - | chr4_3:20680428-20680447 | Msa0634060:intron | 25.0% |
| !! | AAAGTTCCCTTCAATTTTTA+TGG | + | chr4_3:20680437-20680456 | None:intergenic | 25.0% |
| !! | TAAAAATTGAAGGGAACTTT+TGG | - | chr4_3:20680437-20680456 | Msa0634060:intron | 25.0% |
| ! | GAAAAAATAAATAACAGGCA+TGG | - | chr4_3:20680498-20680517 | Msa0634060:intron | 25.0% |
| !!! | ATACTGGTTTATGATTTTCT+TGG | + | chr4_3:20680573-20680592 | None:intergenic | 25.0% |
| ! | TCAAAAATATGCATTTCGTT+TGG | + | chr4_3:20680702-20680721 | None:intergenic | 25.0% |
| ! | CAAATCATAATTACAAAAGG+AGG | - | chr4_3:20680749-20680768 | Msa0634060:intron | 25.0% |
| ! | AACTAAATTTCAATTACCTG+TGG | + | chr4_3:20680999-20681018 | None:intergenic | 25.0% |
| ! | AAAAAGAAAGCAAATCCATA+TGG | + | chr4_3:20681163-20681182 | None:intergenic | 25.0% |
| !!! | TTTTTTCTACAGAACAGATA+TGG | + | chr4_3:20681371-20681390 | None:intergenic | 25.0% |
| ! | TCTTCAAAACACAAGATAAA+TGG | + | chr4_3:20681508-20681527 | None:intergenic | 25.0% |
| !! | TTTCAAATCAGATTTTCAGA+AGG | - | chr4_3:20682041-20682060 | Msa0634060:intron | 25.0% |
| !! | AGAGTACTAATATTTCTATG+TGG | + | chr4_3:20682125-20682144 | None:intergenic | 25.0% |
| !!! | AACTTCATTTGTTTTAACAG+TGG | + | chr4_3:20682239-20682258 | None:intergenic | 25.0% |
| ! | ATAATGAGATTAGCATTTGA+AGG | - | chr4_3:20682276-20682295 | Msa0634060:intron | 25.0% |
| !! | TATTGTTTCTTATGCATTCA+TGG | - | chr4_3:20682733-20682752 | Msa0634060:intron | 25.0% |
| ! | TATAGAGATTTGATATGAAG+AGG | - | chr4_3:20682792-20682811 | Msa0634060:intron | 25.0% |
| ! | ATAGAGATTTGATATGAAGA+GGG | - | chr4_3:20682793-20682812 | Msa0634060:intron | 25.0% |
| !! | AACTTCTTTTATCATCACAA+AGG | + | chr4_3:20682873-20682892 | None:intergenic | 25.0% |
| ! | GCAAAATAGAGATGAAAAAA+TGG | - | chr4_3:20682924-20682943 | Msa0634060:intron | 25.0% |
| ! | AAAACAGTGAAAGAAGAAAA+AGG | - | chr4_3:20682982-20683001 | Msa0634060:intron | 25.0% |
| ! | AAACAGTGAAAGAAGAAAAA+GGG | - | chr4_3:20682983-20683002 | Msa0634060:intron | 25.0% |
| !! | GACATCATCATAGTTAATTT+TGG | - | chr4_3:20683216-20683235 | Msa0634060:intron | 25.0% |
| ! | AATATATTATTACCCTAAGC+TGG | + | chr4_3:20683307-20683326 | None:intergenic | 25.0% |
| ! | CTTCTTATATTAAGAGAGAT+AGG | - | chr4_3:20683343-20683362 | Msa0634060:intron | 25.0% |
| !!! | TTTTGAAAAAGTATGACAAG+AGG | - | chr4_3:20683662-20683681 | Msa0634060:intron | 25.0% |
| !! | ACCATTCATTCAAAAAGTAT+TGG | - | chr4_3:20683705-20683724 | Msa0634060:intron | 25.0% |
| !!! | TCCAATACTTTTTGAATGAA+TGG | + | chr4_3:20683709-20683728 | None:intergenic | 25.0% |
| ! | ATTAAATCGGTTGTGAAAAA+GGG | + | chr4_3:20683736-20683755 | None:intergenic | 25.0% |
| ! | TATTAAATCGGTTGTGAAAA+AGG | + | chr4_3:20683737-20683756 | None:intergenic | 25.0% |
| !! | TGAAGGAATTTTCAGAAATA+CGG | - | chr4_3:20683861-20683880 | Msa0634060:CDS | 25.0% |
| AAAAATTTGTCTCTCCATTC+TGG | + | chr4_3:20672885-20672904 | None:intergenic | 30.0% | |
| TCATTGCTAAATGGTTCAAT+TGG | - | chr4_3:20672957-20672976 | Msa0634060:CDS | 30.0% | |
| CATTGCTAAATGGTTCAATT+GGG | - | chr4_3:20672958-20672977 | Msa0634060:CDS | 30.0% | |
| ! | TAAGTTCAATGGATTCTTCA+TGG | - | chr4_3:20673031-20673050 | Msa0634060:CDS | 30.0% |
| ! | AAGTATCGTACGTTATTGAA+TGG | - | chr4_3:20673891-20673910 | Msa0634060:intron | 30.0% |
| AGTATCGTACGTTATTGAAT+GGG | - | chr4_3:20673892-20673911 | Msa0634060:intron | 30.0% | |
| AAAGACACAAATTTCCACAA+GGG | + | chr4_3:20674010-20674029 | None:intergenic | 30.0% | |
| TAAAGACACAAATTTCCACA+AGG | + | chr4_3:20674011-20674030 | None:intergenic | 30.0% | |
| TGTGGAAATTTGTGTCTTTA+AGG | - | chr4_3:20674011-20674030 | Msa0634060:intron | 30.0% | |
| GTGGAAATTTGTGTCTTTAA+GGG | - | chr4_3:20674012-20674031 | Msa0634060:intron | 30.0% | |
| GTAAAAGAGTAGAAAGTGAA+AGG | - | chr4_3:20674098-20674117 | Msa0634060:intron | 30.0% | |
| GTAAACAACAATAATAGGTG+GGG | - | chr4_3:20674412-20674431 | Msa0634060:intron | 30.0% | |
| !! | AGGAAAGAAAGATTTTAGTG+GGG | + | chr4_3:20674519-20674538 | None:intergenic | 30.0% |
| ! | TTGTTTGGAACACTATAGAA+AGG | + | chr4_3:20674545-20674564 | None:intergenic | 30.0% |
| TTCTATAGTGTTCCAAACAA+AGG | - | chr4_3:20674545-20674564 | Msa0634060:intron | 30.0% | |
| !!! | AAGAAGCATTTTCCTTTGTT+TGG | + | chr4_3:20674560-20674579 | None:intergenic | 30.0% |
| ! | TGTTTCTAAGGAAAGAAAGT+GGG | + | chr4_3:20674603-20674622 | None:intergenic | 30.0% |
| !! | TTGTTTCTAAGGAAAGAAAG+TGG | + | chr4_3:20674604-20674623 | None:intergenic | 30.0% |
| !! | TTAGGGTATGTTTGTTTCTA+AGG | + | chr4_3:20674615-20674634 | None:intergenic | 30.0% |
| !!! | CAACAACTAAGCACTTTTTT+TGG | - | chr4_3:20674663-20674682 | Msa0634060:intron | 30.0% |
| TAAAAATGATCAACACCACA+TGG | - | chr4_3:20674784-20674803 | Msa0634060:intron | 30.0% | |
| AAAAATGATCAACACCACAT+GGG | - | chr4_3:20674785-20674804 | Msa0634060:intron | 30.0% | |
| ACACTAAGAAAAGAAATGCT+AGG | + | chr4_3:20674948-20674967 | None:intergenic | 30.0% | |
| ATTATTACGGTAAAACTGCA+TGG | - | chr4_3:20675075-20675094 | Msa0634060:intron | 30.0% | |
| !!! | CTATTGCGGTGATATTTTTT+TGG | + | chr4_3:20675394-20675413 | None:intergenic | 30.0% |
| TATGATAAACAATGAAGGCA+GGG | + | chr4_3:20675640-20675659 | None:intergenic | 30.0% | |
| ATATGATAAACAATGAAGGC+AGG | + | chr4_3:20675641-20675660 | None:intergenic | 30.0% | |
| ATACAAAAAATTCTCGTGCT+GGG | + | chr4_3:20675737-20675756 | None:intergenic | 30.0% | |
| CAATTTAATTGTGGAGAAGT+GGG | + | chr4_3:20675969-20675988 | None:intergenic | 30.0% | |
| ACAATTTAATTGTGGAGAAG+TGG | + | chr4_3:20675970-20675989 | None:intergenic | 30.0% | |
| AATAAATGATTGAGCTGAAC+CGG | - | chr4_3:20676079-20676098 | Msa0634060:intron | 30.0% | |
| TATGCTTAACGAATATTCGT+TGG | - | chr4_3:20676215-20676234 | Msa0634060:intron | 30.0% | |
| ! | TTTTGTAAATGTACCTTCCT+AGG | - | chr4_3:20676274-20676293 | Msa0634060:intron | 30.0% |
| AATCACTAAATTTCCAACCT+AGG | + | chr4_3:20676294-20676313 | None:intergenic | 30.0% | |
| !! | GGGGTTCATATAGTTATTTT+TGG | - | chr4_3:20676425-20676444 | Msa0634060:intron | 30.0% |
| !! | TTTCAAGTAATGGAGTATTG+TGG | + | chr4_3:20676523-20676542 | None:intergenic | 30.0% |
| TCATATCATCCAAATTCAAG+AGG | - | chr4_3:20676672-20676691 | Msa0634060:intron | 30.0% | |
| GGAATGAGGGAATATATTTA+TGG | - | chr4_3:20676693-20676712 | Msa0634060:intron | 30.0% | |
| !!! | CCGGATGAATTATTTTTTTG+AGG | - | chr4_3:20676734-20676753 | Msa0634060:intron | 30.0% |
| GTTCTGTTTATTTGTGTGAA+CGG | + | chr4_3:20677044-20677063 | None:intergenic | 30.0% | |
| ! | GAATTGACGTTTGAAATTAC+AGG | + | chr4_3:20677112-20677131 | None:intergenic | 30.0% |
| !! | ATTGTTGGATGTTGTTGTTT+CGG | + | chr4_3:20677149-20677168 | None:intergenic | 30.0% |
| ATGTTGATGTTTGTGATTGT+TGG | + | chr4_3:20677164-20677183 | None:intergenic | 30.0% | |
| ! | CACAAAGCTCATCATATTTT+TGG | - | chr4_3:20677636-20677655 | Msa0634060:intron | 30.0% |
| ! | AAAGGTGCATGAGAAATTAT+GGG | + | chr4_3:20677662-20677681 | None:intergenic | 30.0% |
| ! | TAAAGGTGCATGAGAAATTA+TGG | + | chr4_3:20677663-20677682 | None:intergenic | 30.0% |
| ! | TCAAGAGAGTAGTTGATTTA+TGG | - | chr4_3:20678084-20678103 | Msa0634060:intron | 30.0% |
| ! | CAAGAGAGTAGTTGATTTAT+GGG | - | chr4_3:20678085-20678104 | Msa0634060:intron | 30.0% |
| ! | AAGAGAGTAGTTGATTTATG+GGG | - | chr4_3:20678086-20678105 | Msa0634060:intron | 30.0% |
| !!! | TGTTGATTTTCATGGTGAAA+TGG | - | chr4_3:20678175-20678194 | Msa0634060:intron | 30.0% |
| ! | TTCTCACGAAAAACTTTTTG+CGG | - | chr4_3:20678349-20678368 | Msa0634060:intron | 30.0% |
| ACTGTGTAATTATACTGTAG+TGG | - | chr4_3:20678382-20678401 | Msa0634060:intron | 30.0% | |
| !!! | TTGTTTTTACCGGAAAACAT+GGG | + | chr4_3:20678432-20678451 | None:intergenic | 30.0% |
| ! | GGTTTCGTGAAAATAGTTTT+TGG | - | chr4_3:20678480-20678499 | Msa0634060:intron | 30.0% |
| TCAAGAATACTTAACCAGTT+TGG | - | chr4_3:20678647-20678666 | Msa0634060:CDS | 30.0% | |
| ATACTTTGAACAAACCAAAC+TGG | + | chr4_3:20678664-20678683 | None:intergenic | 30.0% | |
| AATTGTAGATCTAAATGCAC+GGG | + | chr4_3:20678745-20678764 | None:intergenic | 30.0% | |
| ATAAAATGCATAGGAGAAGT+GGG | + | chr4_3:20679266-20679285 | None:intergenic | 30.0% | |
| TATAAAATGCATAGGAGAAG+TGG | + | chr4_3:20679267-20679286 | None:intergenic | 30.0% | |
| CAAAAATAACTTTGGTACAC+GGG | + | chr4_3:20679434-20679453 | None:intergenic | 30.0% | |
| GTCACTGACAAAAATAACTT+TGG | + | chr4_3:20679442-20679461 | None:intergenic | 30.0% | |
| CATAAGTAACTCAAATGTAC+AGG | + | chr4_3:20679472-20679491 | None:intergenic | 30.0% | |
| ATTATTGTAGAATTGAAGCG+AGG | - | chr4_3:20679582-20679601 | Msa0634060:intron | 30.0% | |
| ACTAAAATGCATGAGAGAAA+CGG | + | chr4_3:20679985-20680004 | None:intergenic | 30.0% | |
| CCGTATACCATAAAAATTGA+AGG | - | chr4_3:20680427-20680446 | Msa0634060:intron | 30.0% | |
| !!! | TTGGGTTGTTGGTTTTTATT+GGG | + | chr4_3:20680541-20680560 | None:intergenic | 30.0% |
| !!! | TTTGGGTTGTTGGTTTTTAT+TGG | + | chr4_3:20680542-20680561 | None:intergenic | 30.0% |
| !! | GGTATTTATATTTGGGTTGT+TGG | + | chr4_3:20680552-20680571 | None:intergenic | 30.0% |
| TATGCATTTCGTTTGGAAAA+AGG | + | chr4_3:20680695-20680714 | None:intergenic | 30.0% | |
| ATGATTTGATAGAAGGATAG+AGG | + | chr4_3:20680737-20680756 | None:intergenic | 30.0% | |
| TGTAAGTATCAAATCTGGTT+TGG | - | chr4_3:20680945-20680964 | Msa0634060:intron | 30.0% | |
| !! | TATCAAATCTGGTTTGGATT+TGG | - | chr4_3:20680951-20680970 | Msa0634060:intron | 30.0% |
| !! | ATCAAATCTGGTTTGGATTT+GGG | - | chr4_3:20680952-20680971 | Msa0634060:intron | 30.0% |
| ! | ATTTTCTTTCATCTGGCTAT+TGG | - | chr4_3:20681067-20681086 | Msa0634060:intron | 30.0% |
| ! | CAAAATTGCACATGAGTTTT+TGG | + | chr4_3:20681264-20681283 | None:intergenic | 30.0% |
| TGTAGAAAAAATATGTGAGC+AGG | - | chr4_3:20681380-20681399 | Msa0634060:intron | 30.0% | |
| ! | TTTGTTGCATCTCTAGAAAT+AGG | - | chr4_3:20681468-20681487 | Msa0634060:intron | 30.0% |
| AAAGAGTTCAATTATCCTCA+AGG | - | chr4_3:20681539-20681558 | Msa0634060:intron | 30.0% | |
| ATAGAAAAAACAGTGGTGAT+AGG | + | chr4_3:20681665-20681684 | None:intergenic | 30.0% | |
| ! | TCTGATTTGAAAAGAAAGAG+AGG | + | chr4_3:20682033-20682052 | None:intergenic | 30.0% |
| TTACCTTCTTTGATGTTTCT+TGG | - | chr4_3:20682168-20682187 | Msa0634060:intron | 30.0% | |
| !!! | CTTCTTGTTTTATAGTTTGC+TGG | - | chr4_3:20682564-20682583 | Msa0634060:intron | 30.0% |
| GGAGAATGATATAATAGTGA+AGG | - | chr4_3:20683004-20683023 | Msa0634060:intron | 30.0% | |
| !! | ATGTAACTACTAAAGGCATT+TGG | + | chr4_3:20683196-20683215 | None:intergenic | 30.0% |
| TGATGTCATGTAACTACTAA+AGG | + | chr4_3:20683203-20683222 | None:intergenic | 30.0% | |
| TATAAGAAGAGAAGATGTTG+TGG | + | chr4_3:20683332-20683351 | None:intergenic | 30.0% | |
| ! | AAAGTACTAAAATGATCGAG+AGG | + | chr4_3:20683403-20683422 | None:intergenic | 30.0% |
| !! | CTCGATCATTTTAGTACTTT+TGG | - | chr4_3:20683403-20683422 | Msa0634060:intron | 30.0% |
| ! | AACGAATTTGATTCGAAACA+TGG | + | chr4_3:20683483-20683502 | None:intergenic | 30.0% |
| CACGAGTTTCGATATTAAAT+CGG | + | chr4_3:20683749-20683768 | None:intergenic | 30.0% | |
| TTTAATATCGAAACTCGTGA+AGG | - | chr4_3:20683750-20683769 | Msa0634060:intron | 30.0% | |
| ! | AATTTTCAGAAATACGGTTG+CGG | - | chr4_3:20683867-20683886 | Msa0634060:CDS | 30.0% |
| ACAATGCAAGAAATGAGAAA+AGG | - | chr4_3:20683898-20683917 | Msa0634060:CDS | 30.0% | |
| CAGCATTAAGCTGAAATAAT+TGG | + | chr4_3:20683984-20684003 | None:intergenic | 30.0% | |
| TTCAAGATACTTTGCCAGAA+TGG | - | chr4_3:20672868-20672887 | Msa0634060:CDS | 35.0% | |
| GAACCATTTAGCAATGATGT+TGG | + | chr4_3:20672954-20672973 | None:intergenic | 35.0% | |
| CTAAATGGTTCAATTGGGTA+TGG | - | chr4_3:20672963-20672982 | Msa0634060:CDS | 35.0% | |
| AATTGGGTATGGAAAATCTG+AGG | - | chr4_3:20672974-20672993 | Msa0634060:CDS | 35.0% | |
| GGATTTCATTATCCGACATA+AGG | - | chr4_3:20673064-20673083 | Msa0634060:CDS | 35.0% | |
| CTCGTTACTCATGTCTTTAT+TGG | + | chr4_3:20673518-20673537 | None:intergenic | 35.0% | |
| TGTAAATATACCTTCCCTTG+TGG | - | chr4_3:20673993-20674012 | Msa0634060:intron | 35.0% | |
| GAGAAAGGAAAGATTGTATG+AGG | - | chr4_3:20674072-20674091 | Msa0634060:intron | 35.0% | |
| GAGGAAACACCAATATTTGA+TGG | + | chr4_3:20674452-20674471 | None:intergenic | 35.0% | |
| GGAACACTATAGAAAGGTTA+AGG | + | chr4_3:20674539-20674558 | None:intergenic | 35.0% | |
| ! | GTTTCTAAGGAAAGAAAGTG+GGG | + | chr4_3:20674602-20674621 | None:intergenic | 35.0% |
| AACATACCCTAAAAATGGGT+TGG | - | chr4_3:20674623-20674642 | Msa0634060:intron | 35.0% | |
| ! | ACATACCCTAAAAATGGGTT+GGG | - | chr4_3:20674624-20674643 | Msa0634060:intron | 35.0% |
| !! | TTCTACCCAACCCATTTTTA+GGG | + | chr4_3:20674632-20674651 | None:intergenic | 35.0% |
| !! | TTTCTACCCAACCCATTTTT+AGG | + | chr4_3:20674633-20674652 | None:intergenic | 35.0% |
| AAGAAAAGAAATGCTAGGCT+AGG | + | chr4_3:20674943-20674962 | None:intergenic | 35.0% | |
| AGACACAAGTTGTGTTAAAC+TGG | - | chr4_3:20675109-20675128 | Msa0634060:intron | 35.0% | |
| TACTAACATGTGCTCTTATC+TGG | + | chr4_3:20675146-20675165 | None:intergenic | 35.0% | |
| TTCATAGATCCTTCATTCAG+TGG | - | chr4_3:20675278-20675297 | Msa0634060:intron | 35.0% | |
| !! | TGTGAACTAAAAGTGTCTCA+AGG | - | chr4_3:20675536-20675555 | Msa0634060:intron | 35.0% |
| !! | GTGAACTAAAAGTGTCTCAA+GGG | - | chr4_3:20675537-20675556 | Msa0634060:intron | 35.0% |
| ATGATAAACAATGAAGGCAG+GGG | + | chr4_3:20675639-20675658 | None:intergenic | 35.0% | |
| CATACAAAAAATTCTCGTGC+TGG | + | chr4_3:20675738-20675757 | None:intergenic | 35.0% | |
| TACATATTATTTGTAGGGGC+CGG | - | chr4_3:20675925-20675944 | Msa0634060:intron | 35.0% | |
| GAGCTCACACAATTTAATTG+TGG | + | chr4_3:20675978-20675997 | None:intergenic | 35.0% | |
| TTTGGTTAAGTGTAGCTTAG+TGG | + | chr4_3:20676004-20676023 | None:intergenic | 35.0% | |
| ACTAAATTTCCAACCTAGGA+AGG | + | chr4_3:20676290-20676309 | None:intergenic | 35.0% | |
| ! | TTTTTGACCCATATATTCGG+TGG | + | chr4_3:20676378-20676397 | None:intergenic | 35.0% |
| ATCCAAATTCAAGAGGAATG+AGG | - | chr4_3:20676679-20676698 | Msa0634060:intron | 35.0% | |
| TCCAAATTCAAGAGGAATGA+GGG | - | chr4_3:20676680-20676699 | Msa0634060:intron | 35.0% | |
| ! | AATGGTTTTTCCAGCCATTT+TGG | - | chr4_3:20677077-20677096 | Msa0634060:intron | 35.0% |
| !! | TGTTGTTTCGGTTTGATTTC+AGG | + | chr4_3:20677137-20677156 | None:intergenic | 35.0% |
| GTGAAACGTTAACGCATTAT+CGG | + | chr4_3:20677226-20677245 | None:intergenic | 35.0% | |
| GTGTAATGTGTTGCATAATG+TGG | + | chr4_3:20677274-20677293 | None:intergenic | 35.0% | |
| ATCGAATTGTGAGATATACG+TGG | - | chr4_3:20677572-20677591 | Msa0634060:intron | 35.0% | |
| ATAGGAAATAGCAAGAACGT+AGG | + | chr4_3:20677689-20677708 | None:intergenic | 35.0% | |
| TTTCCTATCATTACATGCTC+AGG | - | chr4_3:20677701-20677720 | Msa0634060:intron | 35.0% | |
| !! | TACAATTGGATTTTGAGTGC+AGG | - | chr4_3:20678046-20678065 | Msa0634060:intron | 35.0% |
| ACCTTCAGAAGCAGATTATA+AGG | - | chr4_3:20678124-20678143 | Msa0634060:intron | 35.0% | |
| TCCTTATAATCTGCTTCTGA+AGG | + | chr4_3:20678128-20678147 | None:intergenic | 35.0% | |
| TTCAGAAGCAGATTATAAGG+AGG | - | chr4_3:20678127-20678146 | Msa0634060:intron | 35.0% | |
| AGCAGATTATAAGGAGGAAA+TGG | - | chr4_3:20678133-20678152 | Msa0634060:intron | 35.0% | |
| !!! | CTTGTTTTTACCGGAAAACA+TGG | + | chr4_3:20678433-20678452 | None:intergenic | 35.0% |
| ATACACGAGAGAAGTTGTTA+TGG | + | chr4_3:20678692-20678711 | None:intergenic | 35.0% | |
| ACTAAAATGCACGGGATAAA+TGG | + | chr4_3:20679069-20679088 | None:intergenic | 35.0% | |
| TCCTCATCAACTAAAATGCA+CGG | + | chr4_3:20679078-20679097 | None:intergenic | 35.0% | |
| TCTCATCAACTAATATGCAC+GGG | + | chr4_3:20679322-20679341 | None:intergenic | 35.0% | |
| CTCTCATCAACTAATATGCA+CGG | + | chr4_3:20679323-20679342 | None:intergenic | 35.0% | |
| ATAAAATGCATGGGAGAAGT+GGG | + | chr4_3:20679743-20679762 | None:intergenic | 35.0% | |
| TATAAAATGCATGGGAGAAG+TGG | + | chr4_3:20679744-20679763 | None:intergenic | 35.0% | |
| CCAAAAGTAACTCAAATGCA+TGG | + | chr4_3:20679951-20679970 | None:intergenic | 35.0% | |
| !! | CCATGCATTTGAGTTACTTT+TGG | - | chr4_3:20679948-20679967 | Msa0634060:intron | 35.0% |
| ATTCATCACTCCTAAATGCA+CGG | + | chr4_3:20680041-20680060 | None:intergenic | 35.0% | |
| ! | GCATGGGCTTGTTTAAATTT+CGG | - | chr4_3:20680515-20680534 | Msa0634060:intron | 35.0% |
| ATAGAAGGATAGAGGATGAA+GGG | + | chr4_3:20680729-20680748 | None:intergenic | 35.0% | |
| ACTGTGCAAACATTCTGATA+CGG | + | chr4_3:20680861-20680880 | None:intergenic | 35.0% | |
| ATGTTTGCACAGTAACAACA+TGG | - | chr4_3:20680868-20680887 | Msa0634060:intron | 35.0% | |
| ! | TGTTTGCTAAAATGTTCCAC+AGG | - | chr4_3:20680980-20680999 | Msa0634060:intron | 35.0% |
| !! | TTGAGGCATTTTCTTTCATC+TGG | - | chr4_3:20681060-20681079 | Msa0634060:intron | 35.0% |
| TTGTTGCAGATAGATGAACT+AGG | + | chr4_3:20681587-20681606 | None:intergenic | 35.0% | |
| AAAAATATATAACTCGCCGG+AGG | + | chr4_3:20681981-20682000 | None:intergenic | 35.0% | |
| AGAAAGAGAGGAGAATGAAA+TGG | + | chr4_3:20682021-20682040 | None:intergenic | 35.0% | |
| TCTCCAAGAAACATCAAAGA+AGG | + | chr4_3:20682174-20682193 | None:intergenic | 35.0% | |
| TTACCCTCAATTGTGTGATT+TGG | - | chr4_3:20683274-20683293 | Msa0634060:intron | 35.0% | |
| TTGCCAAATCACACAATTGA+GGG | + | chr4_3:20683280-20683299 | None:intergenic | 35.0% | |
| !!! | CATTGATTTTTTTGTAGGGC+TGG | - | chr4_3:20683633-20683652 | Msa0634060:intron | 35.0% |
| ! | AAAAAGTATGACAAGAGGAC+AGG | - | chr4_3:20683667-20683686 | Msa0634060:intron | 35.0% |
| AGAAGCAAAAGAAGCTATAG+TGG | - | chr4_3:20683831-20683850 | Msa0634060:CDS | 35.0% | |
| AATTGGATGAGATCAGAATC+TGG | + | chr4_3:20683967-20683986 | None:intergenic | 35.0% | |
| GCACCAACATCATTGCTAAA+TGG | - | chr4_3:20672948-20672967 | Msa0634060:CDS | 40.0% | |
| TGGATTCTTCATGGAACAAG+AGG | - | chr4_3:20673040-20673059 | Msa0634060:CDS | 40.0% | |
| ATTCTTCATGGAACAAGAGG+AGG | - | chr4_3:20673043-20673062 | Msa0634060:CDS | 40.0% | |
| TGAGTAACGAGAAAACGTGT+CGG | - | chr4_3:20673527-20673546 | Msa0634060:intron | 40.0% | |
| !! | GTTTTGATCGTCGAATCTCA+CGG | - | chr4_3:20673668-20673687 | Msa0634060:intron | 40.0% |
| ACACAAATTTCCACAAGGGA+AGG | + | chr4_3:20674006-20674025 | None:intergenic | 40.0% | |
| ! | TGTGTCTTTAAGGGTGTGTT+TGG | - | chr4_3:20674021-20674040 | Msa0634060:intron | 40.0% |
| ! | TCTTTAAGGGTGTGTTTGGT+TGG | - | chr4_3:20674025-20674044 | Msa0634060:intron | 40.0% |
| ! | CTTTAAGGGTGTGTTTGGTT+GGG | - | chr4_3:20674026-20674045 | Msa0634060:intron | 40.0% |
| ! | TTTAAGGGTGTGTTTGGTTG+GGG | - | chr4_3:20674027-20674046 | Msa0634060:intron | 40.0% |
| GTGAAGGGAAAGATAGAGAA+AGG | - | chr4_3:20674057-20674076 | Msa0634060:intron | 40.0% | |
| TCAAATGCACGGAAAGATTG+AGG | + | chr4_3:20674471-20674490 | None:intergenic | 40.0% | |
| TCAATCTTTCCGTGCATTTG+AGG | - | chr4_3:20674470-20674489 | Msa0634060:intron | 40.0% | |
| CAATCTTTCCGTGCATTTGA+GGG | - | chr4_3:20674471-20674490 | Msa0634060:intron | 40.0% | |
| ! | GTGGAAAGGTTTTCTTAGGT+GGG | - | chr4_3:20674493-20674512 | Msa0634060:intron | 40.0% |
| ! | CGGTAAAACTGCATGGATTA+TGG | - | chr4_3:20675082-20675101 | Msa0634060:intron | 40.0% |
| ATAGATCCTTCATTCAGTGG+CGG | - | chr4_3:20675281-20675300 | Msa0634060:intron | 40.0% | |
| CGGATCTTGCCGAAAATATT+GGG | - | chr4_3:20675301-20675320 | Msa0634060:intron | 40.0% | |
| GGATCTTGCCGAAAATATTG+GGG | - | chr4_3:20675302-20675321 | Msa0634060:intron | 40.0% | |
| GATCTTGCCGAAAATATTGG+GGG | - | chr4_3:20675303-20675322 | Msa0634060:intron | 40.0% | |
| !! | GAATCGCGTTTTGATATGTG+AGG | - | chr4_3:20675467-20675486 | Msa0634060:intron | 40.0% |
| TTTGATATGTGAGGATGGAG+AGG | - | chr4_3:20675476-20675495 | Msa0634060:intron | 40.0% | |
| ! | TTTTGTCTGAGTCTCTCTCT+CGG | + | chr4_3:20675512-20675531 | None:intergenic | 40.0% |
| !!! | TTTTTTATTAGGGGGTGCCA+CGG | - | chr4_3:20675588-20675607 | Msa0634060:intron | 40.0% |
| ACATATTATTTGTAGGGGCC+GGG | - | chr4_3:20675926-20675945 | Msa0634060:intron | 40.0% | |
| GTAAATGTACCTTCCTAGGT+TGG | - | chr4_3:20676278-20676297 | Msa0634060:intron | 40.0% | |
| TGCAAGATCCACCGAATATA+TGG | - | chr4_3:20676367-20676386 | Msa0634060:intron | 40.0% | |
| GCAAGATCCACCGAATATAT+GGG | - | chr4_3:20676368-20676387 | Msa0634060:intron | 40.0% | |
| !!! | AGTTTTTTTGGTGGTGATCG+AGG | - | chr4_3:20676552-20676571 | Msa0634060:intron | 40.0% |
| TCCCTCATTCCTCTTGAATT+TGG | + | chr4_3:20676684-20676703 | None:intergenic | 40.0% | |
| AATTACCTAAAAGCCTCCAG+CGG | - | chr4_3:20676953-20676972 | Msa0634060:intron | 40.0% | |
| ! | TGTTTCGGTTTGATTTCAGG+TGG | + | chr4_3:20677134-20677153 | None:intergenic | 40.0% |
| AGGTAAGGTGATGAGTGAAT+AGG | - | chr4_3:20677317-20677336 | Msa0634060:intron | 40.0% | |
| TAAGGTGATGAGTGAATAGG+AGG | - | chr4_3:20677320-20677339 | Msa0634060:intron | 40.0% | |
| TGATGAGTGAATAGGAGGTA+GGG | - | chr4_3:20677325-20677344 | Msa0634060:intron | 40.0% | |
| !!! | AGGTAGGGTTTTCTGGTTTT+GGG | - | chr4_3:20677340-20677359 | Msa0634060:intron | 40.0% |
| !! | AATTACTTTAAAGCCCCCAG+CGG | + | chr4_3:20677454-20677473 | None:intergenic | 40.0% |
| AGCAAGAACGTAGGTGATAA+AGG | + | chr4_3:20677680-20677699 | None:intergenic | 40.0% | |
| CAACCTGAGCATGTAATGAT+AGG | + | chr4_3:20677707-20677726 | None:intergenic | 40.0% | |
| GTAGTGTTGTGTTTCTCACA+TGG | - | chr4_3:20677951-20677970 | Msa0634060:intron | 40.0% | |
| TGTGTTTCTCACATGGAGAT+AGG | - | chr4_3:20677958-20677977 | Msa0634060:intron | 40.0% | |
| ! | GTTGATTTATGGGGACCAAA+TGG | - | chr4_3:20678095-20678114 | Msa0634060:intron | 40.0% |
| TCTGAAGGTTGACTACCATT+TGG | + | chr4_3:20678113-20678132 | None:intergenic | 40.0% | |
| ! | TTCAACACACCCATGTTTTC+CGG | - | chr4_3:20678420-20678439 | Msa0634060:intron | 40.0% |
| !!! | GCGTTGGATCTTGTTTTTAC+CGG | + | chr4_3:20678442-20678461 | None:intergenic | 40.0% |
| CCTCATCAACTAAAATGCAC+GGG | + | chr4_3:20679077-20679096 | None:intergenic | 40.0% | |
| ACTAATATGCACGGGACAAA+TGG | + | chr4_3:20679314-20679333 | None:intergenic | 40.0% | |
| AAAAAAATGCACGGGAGAAG+CGG | + | chr4_3:20679502-20679521 | None:intergenic | 40.0% | |
| TCCATTTATCCCGTGCATTT+AGG | - | chr4_3:20679065-20679084 | Msa0634060:intron | 40.0% | |
| TCCTAAATGCACGGGATAAA+TGG | + | chr4_3:20680032-20680051 | None:intergenic | 40.0% | |
| TTCATCACTCCTAAATGCAC+GGG | + | chr4_3:20680040-20680059 | None:intergenic | 40.0% | |
| AGGGAAGCTGAAATGAATAC+TGG | + | chr4_3:20680589-20680608 | None:intergenic | 40.0% | |
| GCATTTCGTTTGGAAAAAGG+AGG | + | chr4_3:20680692-20680711 | None:intergenic | 40.0% | |
| GATAGAAGGATAGAGGATGA+AGG | + | chr4_3:20680730-20680749 | None:intergenic | 40.0% | |
| CGGTGGTCAACAGAAAAAAA+TGG | + | chr4_3:20680821-20680840 | None:intergenic | 40.0% | |
| TGGTGAAAATTTCAGTACGG+TGG | + | chr4_3:20680838-20680857 | None:intergenic | 40.0% | |
| CGGTGGTGAAAATTTCAGTA+CGG | + | chr4_3:20680841-20680860 | None:intergenic | 40.0% | |
| ATATCACGTGTGAACAGTTG+AGG | + | chr4_3:20681729-20681748 | None:intergenic | 40.0% | |
| !! | GTTGATGGGTCATTGATTTG+TGG | + | chr4_3:20681759-20681778 | None:intergenic | 40.0% |
| TGGAGATGAAAAAGCAAAGG+AGG | + | chr4_3:20681910-20681929 | None:intergenic | 40.0% | |
| ! | TTGGTGTAATTGGTGGTACA+CGG | + | chr4_3:20681933-20681952 | None:intergenic | 40.0% |
| ! | TGAAAGGTGGTTGGTGTAAT+TGG | + | chr4_3:20681943-20681962 | None:intergenic | 40.0% |
| AAGAGAGGAGAATGAAATGG+TGG | + | chr4_3:20682018-20682037 | None:intergenic | 40.0% | |
| ATGCTGCAAGTTGTACTCTT+GGG | + | chr4_3:20683085-20683104 | None:intergenic | 40.0% | |
| AATGCTGCAAGTTGTACTCT+TGG | + | chr4_3:20683086-20683105 | None:intergenic | 40.0% | |
| ! | AAGAGTACAACTTGCAGCAT+TGG | - | chr4_3:20683085-20683104 | Msa0634060:intron | 40.0% |
| CTTGCCAAATCACACAATTG+AGG | + | chr4_3:20683281-20683300 | None:intergenic | 40.0% | |
| CATAATCGATGCAGTGTTTC+CGG | - | chr4_3:20683783-20683802 | Msa0634060:CDS | 40.0% | |
| AAAGAAGCTATAGTGGTAGC+TGG | - | chr4_3:20683838-20683857 | Msa0634060:CDS | 40.0% | |
| TCAGAATCTGGCAAATTGAG+AGG | + | chr4_3:20683955-20683974 | None:intergenic | 40.0% | |
| GAGTAACGAGAAAACGTGTC+GGG | - | chr4_3:20673528-20673547 | Msa0634060:intron | 45.0% | |
| ! | TTAAGGGTGTGTTTGGTTGG+GGG | - | chr4_3:20674028-20674047 | Msa0634060:intron | 45.0% |
| ! | GAGGGTGGAAAGGTTTTCTT+AGG | - | chr4_3:20674489-20674508 | Msa0634060:intron | 45.0% |
| ! | GGTGGAAAGGTTTTCTTAGG+TGG | - | chr4_3:20674492-20674511 | Msa0634060:intron | 45.0% |
| TCTAAGGAAAGAAAGTGGGG+AGG | + | chr4_3:20674599-20674618 | None:intergenic | 45.0% | |
| GTGTTAAACTGGCAACGTGT+CGG | - | chr4_3:20675120-20675139 | Msa0634060:intron | 45.0% | |
| GCGGATCTTGCCGAAAATAT+TGG | - | chr4_3:20675300-20675319 | Msa0634060:intron | 45.0% | |
| ! | TACCGCACCCCCAATATTTT+CGG | + | chr4_3:20675313-20675332 | None:intergenic | 45.0% |
| GTCTCGTGTTTGAGCTATTG+CGG | + | chr4_3:20675408-20675427 | None:intergenic | 45.0% | |
| GCGATTCTCACTTCTCATGT+TGG | + | chr4_3:20675454-20675473 | None:intergenic | 45.0% | |
| !! | CGCGTTTTGATATGTGAGGA+TGG | - | chr4_3:20675471-20675490 | Msa0634060:intron | 45.0% |
| ATAAACAATGAAGGCAGGGG+CGG | + | chr4_3:20675636-20675655 | None:intergenic | 45.0% | |
| TGCTTCCTTAACCAGTACTC+CGG | + | chr4_3:20675691-20675710 | None:intergenic | 45.0% | |
| CATATTATTTGTAGGGGCCG+GGG | - | chr4_3:20675927-20675946 | Msa0634060:intron | 45.0% | |
| CTTACACTGGTAGTAGCTAG+TGG | - | chr4_3:20676315-20676334 | Msa0634060:intron | 45.0% | |
| TTAACTGCCGCTCAAGTAAC+CGG | - | chr4_3:20676979-20676998 | Msa0634060:intron | 45.0% | |
| AAAACCATTGCAGACTGCAC+TGG | + | chr4_3:20677066-20677085 | None:intergenic | 45.0% | |
| ACAGGTACAAACGGCCAAAA+TGG | + | chr4_3:20677094-20677113 | None:intergenic | 45.0% | |
| GTGATGAGTGAATAGGAGGT+AGG | - | chr4_3:20677324-20677343 | Msa0634060:intron | 45.0% | |
| ! | GAATAGGAGGTAGGGTTTTC+TGG | - | chr4_3:20677333-20677352 | Msa0634060:intron | 45.0% |
| !!! | GAGGTAGGGTTTTCTGGTTT+TGG | - | chr4_3:20677339-20677358 | Msa0634060:intron | 45.0% |
| !!! | GGTAGGGTTTTCTGGTTTTG+GGG | - | chr4_3:20677341-20677360 | Msa0634060:intron | 45.0% |
| !!! | GTAGGGTTTTCTGGTTTTGG+GGG | - | chr4_3:20677342-20677361 | Msa0634060:intron | 45.0% |
| !!! | TAGGGTTTTCTGGTTTTGGG+GGG | - | chr4_3:20677343-20677362 | Msa0634060:intron | 45.0% |
| !! | TTTTGGGGGGGAAAAAGCAA+CGG | - | chr4_3:20677356-20677375 | Msa0634060:intron | 45.0% |
| CAGCGGCAGTTAACTATTGT+CGG | - | chr4_3:20677399-20677418 | Msa0634060:intron | 45.0% | |
| !! | ACTATTGTCGGTTTCCCCAA+CGG | - | chr4_3:20677411-20677430 | Msa0634060:intron | 45.0% |
| TAGGCAGTTAACTACCGTTG+GGG | + | chr4_3:20677428-20677447 | None:intergenic | 45.0% | |
| GTAGGCAGTTAACTACCGTT+GGG | + | chr4_3:20677429-20677448 | None:intergenic | 45.0% | |
| AGTAGGCAGTTAACTACCGT+TGG | + | chr4_3:20677430-20677449 | None:intergenic | 45.0% | |
| CCAGGTGCATATGAAGCTTA+TGG | + | chr4_3:20677599-20677618 | None:intergenic | 45.0% | |
| CCATAAGCTTCATATGCACC+TGG | - | chr4_3:20677596-20677615 | Msa0634060:intron | 45.0% | |
| GTGAAGTCGTTGAATAGTCC+AGG | + | chr4_3:20677617-20677636 | None:intergenic | 45.0% | |
| CGCGAATAAACTATGTGCGT+TGG | + | chr4_3:20678458-20678477 | None:intergenic | 45.0% | |
| CGCACATAGTTTATTCGCGA+TGG | - | chr4_3:20678459-20678478 | Msa0634060:intron | 45.0% | |
| CACGAGAGAAGTTGTTATGG+TGG | + | chr4_3:20678689-20678708 | None:intergenic | 45.0% | |
| !!! | CCCGTGCATTTTAGTTGATG+AGG | - | chr4_3:20679074-20679093 | Msa0634060:intron | 45.0% |
| AAAAAATGCACGGGAGAAGC+GGG | + | chr4_3:20679501-20679520 | None:intergenic | 45.0% | |
| AGCGGCTAGGGTTTCTATTA+GGG | + | chr4_3:20680633-20680652 | None:intergenic | 45.0% | |
| TTTGGAAAAAGGAGGCTGGA+CGG | + | chr4_3:20680684-20680703 | None:intergenic | 45.0% | |
| TTCGTTTGGAAAAAGGAGGC+TGG | + | chr4_3:20680688-20680707 | None:intergenic | 45.0% | |
| GTGCAAACATTCTGATACGG+TGG | + | chr4_3:20680858-20680877 | None:intergenic | 45.0% | |
| ! | TCCTCAAGGCACTATTGACA+TGG | - | chr4_3:20681553-20681572 | Msa0634060:intron | 45.0% |
| TCCATGTCAATAGTGCCTTG+AGG | + | chr4_3:20681557-20681576 | None:intergenic | 45.0% | |
| CGGTGGAGATGAAAAAGCAA+AGG | + | chr4_3:20681913-20681932 | None:intergenic | 45.0% | |
| ! | AAGGTGGTTGGTGTAATTGG+TGG | + | chr4_3:20681940-20681959 | None:intergenic | 45.0% |
| AAATGGGTGTGACTGAAAGG+TGG | + | chr4_3:20681956-20681975 | None:intergenic | 45.0% | |
| GTGAAATGGGTGTGACTGAA+AGG | + | chr4_3:20681959-20681978 | None:intergenic | 45.0% | |
| TAAGTGGGAGAAGAAGTGAG+TGG | + | chr4_3:20682685-20682704 | None:intergenic | 45.0% | |
| TGCTGCAAGTTGTACTCTTG+GGG | + | chr4_3:20683084-20683103 | None:intergenic | 45.0% | |
| ATTTGGCAAGCAACCAGCTT+AGG | - | chr4_3:20683291-20683310 | Msa0634060:intron | 45.0% | |
| TTTGGCAAGCAACCAGCTTA+GGG | - | chr4_3:20683292-20683311 | Msa0634060:intron | 45.0% | |
| AAGTATGACAAGAGGACAGG+AGG | - | chr4_3:20683670-20683689 | Msa0634060:intron | 45.0% | |
| !! | CGGAAACACTGCATCGATTA+TGG | + | chr4_3:20683785-20683804 | None:intergenic | 45.0% |
| GAATCTGGCAAATTGAGAGG+AGG | + | chr4_3:20683952-20683971 | None:intergenic | 45.0% | |
| !!! | TTTTTATTTTTTTCAATTTA+CGG | + | chr4_3:20674366-20674385 | None:intergenic | 5.0% |
| !!! | ATATTTTTTAATGATTATTA+CGG | - | chr4_3:20675062-20675081 | Msa0634060:intron | 5.0% |
| !! | AAAAATAAAAAGTTAAAAAA+TGG | - | chr4_3:20675176-20675195 | Msa0634060:intron | 5.0% |
| !!! | ATATACAATTTTTTTTTATT+AGG | - | chr4_3:20675577-20675596 | Msa0634060:intron | 5.0% |
| !!! | TATACAATTTTTTTTTATTA+GGG | - | chr4_3:20675578-20675597 | Msa0634060:intron | 5.0% |
| !!! | TATTTTATTAATTTTTTTAG+AGG | - | chr4_3:20675802-20675821 | Msa0634060:intron | 5.0% |
| !!! | AAAAATAATATAAGTTTTTT+TGG | - | chr4_3:20676540-20676559 | Msa0634060:intron | 5.0% |
| !! | ATATTATAAATAATTATCAT+AGG | - | chr4_3:20678584-20678603 | Msa0634060:intron | 5.0% |
| !!! | ATTATTTTAAAATTTGTTTA+AGG | - | chr4_3:20680119-20680138 | Msa0634060:intron | 5.0% |
| !!! | TTATTTTAAAATTTGTTTAA+GGG | - | chr4_3:20680120-20680139 | Msa0634060:intron | 5.0% |
| !! | ATTATTTAAATATATGTATT+AGG | + | chr4_3:20680371-20680390 | None:intergenic | 5.0% |
| TGGGAAGAGACTCAAGCAAC+AGG | - | chr4_3:20672845-20672864 | Msa0634060:CDS | 50.0% | |
| TGGTTGGGGGATGAAAGTGA+AGG | - | chr4_3:20674041-20674060 | Msa0634060:intron | 50.0% | |
| GGTTGGGGGATGAAAGTGAA+GGG | - | chr4_3:20674042-20674061 | Msa0634060:intron | 50.0% | |
| TCTTTCCGTGCATTTGAGGG+TGG | - | chr4_3:20674474-20674493 | Msa0634060:intron | 50.0% | |
| CCTTTCCACCCTCAAATGCA+CGG | + | chr4_3:20674482-20674501 | None:intergenic | 50.0% | |
| TGGGGAGGAGAGAAAGTTGA+GGG | + | chr4_3:20674584-20674603 | None:intergenic | 50.0% | |
| CAAGATCCGCCACTGAATGA+AGG | + | chr4_3:20675290-20675309 | None:intergenic | 50.0% | |
| TGCCGAAAATATTGGGGGTG+CGG | - | chr4_3:20675308-20675327 | Msa0634060:intron | 50.0% | |
| TATGTGAGGATGGAGAGGAG+AGG | - | chr4_3:20675481-20675500 | Msa0634060:intron | 50.0% | |
| ATGTGAGGATGGAGAGGAGA+GGG | - | chr4_3:20675482-20675501 | Msa0634060:intron | 50.0% | |
| TTCCTTAACCAGTACTCCGG+GGG | + | chr4_3:20675688-20675707 | None:intergenic | 50.0% | |
| CTTCCTTAACCAGTACTCCG+GGG | + | chr4_3:20675689-20675708 | None:intergenic | 50.0% | |
| GCTTCCTTAACCAGTACTCC+GGG | + | chr4_3:20675690-20675709 | None:intergenic | 50.0% | |
| AAAATTCTCGTGCTGGGCAC+AGG | + | chr4_3:20675731-20675750 | None:intergenic | 50.0% | |
| TTGTGGAGAAGTGGGATGTC+CGG | + | chr4_3:20675961-20675980 | None:intergenic | 50.0% | |
| AGCTAGTGGCATAGATCACG+CGG | - | chr4_3:20676329-20676348 | Msa0634060:intron | 50.0% | |
| AGAACCAGTGCAGTCTGCAA+TGG | - | chr4_3:20677059-20677078 | Msa0634060:intron | 50.0% | |
| GTACAAACGGCCAAAATGGC+TGG | + | chr4_3:20677090-20677109 | None:intergenic | 50.0% | |
| !!! | AGGGTTTTCTGGTTTTGGGG+GGG | - | chr4_3:20677344-20677363 | Msa0634060:intron | 50.0% |
| ACGGTAGTTAACTACCGCTG+AGG | - | chr4_3:20677375-20677394 | Msa0634060:intron | 50.0% | |
| CGACAATAGTTAACTGCCGC+TGG | + | chr4_3:20677401-20677420 | None:intergenic | 50.0% | |
| AGTTAACTGCCTACTACCGC+TGG | - | chr4_3:20677435-20677454 | Msa0634060:intron | 50.0% | |
| GTTAACTGCCTACTACCGCT+GGG | - | chr4_3:20677436-20677455 | Msa0634060:intron | 50.0% | |
| TTAACTGCCTACTACCGCTG+GGG | - | chr4_3:20677437-20677456 | Msa0634060:intron | 50.0% | |
| GGAGAAGACAGAGAGAGGAA+GGG | + | chr4_3:20680608-20680627 | None:intergenic | 50.0% | |
| GCTAGGGTTTCTATTAGGGG+CGG | + | chr4_3:20680629-20680648 | None:intergenic | 50.0% | |
| GCGGCTAGGGTTTCTATTAG+GGG | + | chr4_3:20680632-20680651 | None:intergenic | 50.0% | |
| CAGCGGCTAGGGTTTCTATT+AGG | + | chr4_3:20680634-20680653 | None:intergenic | 50.0% | |
| ! | GTGTAATTGGTGGTACACGG+TGG | + | chr4_3:20681930-20681949 | None:intergenic | 50.0% |
| AGTCACACCCATTTCACCTC+CGG | - | chr4_3:20681962-20681981 | Msa0634060:intron | 50.0% | |
| TAACTCGCCGGAGGTGAAAT+GGG | + | chr4_3:20681972-20681991 | None:intergenic | 50.0% | |
| ATAACTCGCCGGAGGTGAAA+TGG | + | chr4_3:20681973-20681992 | None:intergenic | 50.0% | |
| CTGCAAGTTGTACTCTTGGG+GGG | + | chr4_3:20683082-20683101 | None:intergenic | 50.0% | |
| GCTGCAAGTTGTACTCTTGG+GGG | + | chr4_3:20683083-20683102 | None:intergenic | 50.0% | |
| CTTTCAGCTTCTTCCTCGAC+CGG | + | chr4_3:20683805-20683824 | None:intergenic | 50.0% | |
| GCTATAGTGGTAGCTGGTGA+AGG | - | chr4_3:20683844-20683863 | Msa0634060:CDS | 50.0% | |
| CCGTGCATTTGAGGGTGGAA+AGG | - | chr4_3:20674479-20674498 | Msa0634060:intron | 55.0% | |
| GTGGGGAGGAGAGAAAGTTG+AGG | + | chr4_3:20674585-20674604 | None:intergenic | 55.0% | |
| TGTGAGGATGGAGAGGAGAG+GGG | - | chr4_3:20675483-20675502 | Msa0634060:intron | 55.0% | |
| CGGATCTCTATTGAGACCCC+AGG | + | chr4_3:20675616-20675635 | None:intergenic | 55.0% | |
| AAAATGTTGACCGGTGCCCC+CGG | - | chr4_3:20675669-20675688 | Msa0634060:intron | 55.0% | |
| TGTGGAGAAGTGGGATGTCC+GGG | + | chr4_3:20675960-20675979 | None:intergenic | 55.0% | |
| GGTGATCGAGGTTCGAACAC+CGG | - | chr4_3:20676564-20676583 | Msa0634060:intron | 55.0% | |
| ! | AACTGCCGCTGGAGGCTTTT+AGG | + | chr4_3:20676961-20676980 | None:intergenic | 55.0% |
| ! | ACTGCTGCCGGTTACTTGAG+CGG | + | chr4_3:20676989-20677008 | None:intergenic | 55.0% |
| ! | TTAACTGTCGCTGGTGCCAG+CGG | + | chr4_3:20677018-20677037 | None:intergenic | 55.0% |
| GAACGGCAGTTAACTGTCGC+TGG | + | chr4_3:20677027-20677046 | None:intergenic | 55.0% | |
| TTAACTACCGCTGAGGCCAG+CGG | - | chr4_3:20677382-20677401 | Msa0634060:intron | 55.0% | |
| TAACTGCCTACTACCGCTGG+GGG | - | chr4_3:20677438-20677457 | Msa0634060:intron | 55.0% | |
| TTAAAGCCCCCAGCGGTAGT+AGG | + | chr4_3:20677447-20677466 | None:intergenic | 55.0% | |
| ! | AACAAACCCGTGCTGACGCA+CGG | - | chr4_3:20678514-20678533 | Msa0634060:intron | 55.0% |
| ATTGTACCCGTGCGTCAGCA+CGG | + | chr4_3:20678524-20678543 | None:intergenic | 55.0% | |
| CGGAGAAGACAGAGAGAGGA+AGG | + | chr4_3:20680609-20680628 | None:intergenic | 55.0% | |
| AAAGAGAGTGGCAGCGGCTA+GGG | + | chr4_3:20680645-20680664 | None:intergenic | 55.0% | |
| !! | GTTGGTGGCCAGAAAGAGAG+TGG | + | chr4_3:20680657-20680676 | None:intergenic | 55.0% |
| AAAAAGGAGGCTGGACGGAG+GGG | + | chr4_3:20680679-20680698 | None:intergenic | 55.0% | |
| GAAAAAGGAGGCTGGACGGA+GGG | + | chr4_3:20680680-20680699 | None:intergenic | 55.0% | |
| GGGTGTGACTGAAAGGTGGT+TGG | + | chr4_3:20681952-20681971 | None:intergenic | 55.0% | |
| GTGAGGATGGAGAGGAGAGG+GGG | - | chr4_3:20675484-20675503 | Msa0634060:intron | 60.0% | |
| ! | TATTGAGACCCCAGGTGCCG+TGG | + | chr4_3:20675608-20675627 | None:intergenic | 60.0% |
| !! | TGCCCCCGGAGTACTGGTTA+AGG | - | chr4_3:20675683-20675702 | Msa0634060:intron | 60.0% |
| GTGGAGAAGTGGGATGTCCG+GGG | + | chr4_3:20675959-20675978 | None:intergenic | 60.0% | |
| CAGCGGCAGTTAACTGCTGC+CGG | + | chr4_3:20677001-20677020 | None:intergenic | 60.0% | |
| ! | TTAACTGCCGCTGGCCTCAG+CGG | + | chr4_3:20677392-20677411 | None:intergenic | 60.0% |
| ! | ACAAACCCGTGCTGACGCAC+GGG | - | chr4_3:20678515-20678534 | Msa0634060:intron | 60.0% |
| TTGTACCCGTGCGTCAGCAC+GGG | + | chr4_3:20678523-20678542 | None:intergenic | 60.0% | |
| GAAAGAGAGTGGCAGCGGCT+AGG | + | chr4_3:20680646-20680665 | None:intergenic | 60.0% | |
| AGCCGCTGCCACTCTCTTTC+TGG | - | chr4_3:20680646-20680665 | Msa0634060:intron | 60.0% | |
| GGCCAGAAAGAGAGTGGCAG+CGG | + | chr4_3:20680651-20680670 | None:intergenic | 60.0% | |
| GGAAAAAGGAGGCTGGACGG+AGG | + | chr4_3:20680681-20680700 | None:intergenic | 60.0% | |
| CGATGCAGTGTTTCCGGTCG+AGG | - | chr4_3:20683789-20683808 | Msa0634060:CDS | 60.0% | |
| ! | AACCAGTACTCCGGGGGCAC+CGG | + | chr4_3:20675682-20675701 | None:intergenic | 65.0% |
| GATGTCCGGGGTTCGAACCC+CGG | + | chr4_3:20675947-20675966 | None:intergenic | 65.0% | |
| CGGCAGTTAACTGCCGCTGG+AGG | + | chr4_3:20676969-20676988 | None:intergenic | 65.0% | |
| GAGCGGCAGTTAACTGCCGC+TGG | + | chr4_3:20676972-20676991 | None:intergenic | 65.0% | |
| CGGCAGCAGTTAACTGCCGC+TGG | - | chr4_3:20676999-20677018 | Msa0634060:intron | 65.0% | |
| GGGGCGGAGAAGACAGAGAG+AGG | + | chr4_3:20680613-20680632 | None:intergenic | 65.0% | |
| !! | TTAGGGGGTGCCACGGCACC+TGG | - | chr4_3:20675595-20675614 | Msa0634060:intron | 70.0% |
| !! | TAGGGGGTGCCACGGCACCT+GGG | - | chr4_3:20675596-20675615 | Msa0634060:intron | 70.0% |
| AGGCTGGACGGAGGGGTTGG+TGG | + | chr4_3:20680672-20680691 | None:intergenic | 70.0% | |
| AGGAGGCTGGACGGAGGGGT+TGG | + | chr4_3:20680675-20680694 | None:intergenic | 70.0% | |
| !! | AGGGGGTGCCACGGCACCTG+GGG | - | chr4_3:20675597-20675616 | Msa0634060:intron | 75.0% |
| GACCGGTGCCCCCGGAGTAC+TGG | - | chr4_3:20675677-20675696 | Msa0634060:intron | 75.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | - | chr4_3:20675939-20675958 | Msa0634060:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 20672837 | 20684020 | 20672837 | ID=Msa0634060;Name=Msa0634060 |
| chr4_3 | mRNA | 20672837 | 20684020 | 20672837 | ID=Msa0634060-mRNA-1;Parent=Msa0634060;Name=Msa0634060-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|261 |
| chr4_3 | exon | 20683772 | 20684020 | 20683772 | ID=Msa0634060-mRNA-1:exon:5453;Parent=Msa0634060-mRNA-1 |
| chr4_3 | exon | 20678624 | 20678789 | 20678624 | ID=Msa0634060-mRNA-1:exon:5452;Parent=Msa0634060-mRNA-1 |
| chr4_3 | exon | 20672837 | 20673207 | 20672837 | ID=Msa0634060-mRNA-1:exon:5451;Parent=Msa0634060-mRNA-1 |
| chr4_3 | CDS | 20683772 | 20684020 | 20683772 | ID=Msa0634060-mRNA-1:cds;Parent=Msa0634060-mRNA-1 |
| chr4_3 | CDS | 20678624 | 20678789 | 20678624 | ID=Msa0634060-mRNA-1:cds;Parent=Msa0634060-mRNA-1 |
| chr4_3 | CDS | 20672837 | 20673207 | 20672837 | ID=Msa0634060-mRNA-1:cds;Parent=Msa0634060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
