Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0638270 | XP_013443735.1 | 98.209 | 335 | 6 | 0 | 1 | 335 | 1 | 335 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0638270 | sp|Q6AWY4|GRF5_ORYSJ | 44.380 | 347 | 149 | 8 | 13 | 325 | 12 | 348 | 1.08e-85 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0638270 | TF | GRF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0638270 | Msa0677240 | 0.997983 | 1.936936e-253 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0638270 | MtrunA17_Chr4g0021261 | 98.209 | 335 | 6 | 0 | 1 | 335 | 1 | 335 | 0.0 | 681 |
| Msa0638270 | MtrunA17_Chr4g0070591 | 39.516 | 372 | 158 | 14 | 17 | 331 | 1 | 362 | 1.24e-60 | 199 |
| Msa0638270 | MtrunA17_Chr2g0300511 | 40.331 | 362 | 151 | 14 | 25 | 335 | 7 | 354 | 2.04e-57 | 190 |
| Msa0638270 | MtrunA17_Chr8g0343881 | 68.908 | 119 | 35 | 2 | 16 | 132 | 1 | 119 | 4.37e-49 | 168 |
| Msa0638270 | MtrunA17_Chr5g0409471 | 70.370 | 108 | 21 | 3 | 25 | 132 | 16 | 112 | 7.83e-47 | 162 |
| Msa0638270 | MtrunA17_Chr7g0265931 | 61.607 | 112 | 40 | 3 | 26 | 135 | 79 | 189 | 8.33e-39 | 142 |
| Msa0638270 | MtrunA17_Chr1g0152191 | 56.034 | 116 | 46 | 2 | 25 | 135 | 144 | 259 | 1.65e-36 | 140 |
| Msa0638270 | MtrunA17_Chr3g0127641 | 46.429 | 140 | 57 | 3 | 2 | 141 | 90 | 211 | 1.01e-30 | 122 |
| Msa0638270 | MtrunA17_Chr8g0351521 | 41.611 | 149 | 69 | 3 | 14 | 161 | 43 | 174 | 1.11e-24 | 104 |
| Msa0638270 | MtrunA17_Chr8g0351521 | 42.105 | 76 | 39 | 1 | 79 | 149 | 293 | 368 | 1.03e-12 | 68.9 |
| Msa0638270 | MtrunA17_Chr8g0351291 | 64.103 | 39 | 14 | 0 | 88 | 126 | 51 | 89 | 2.84e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0638270 | AT3G13960.1 | 64.220 | 109 | 38 | 1 | 25 | 132 | 16 | 124 | 2.16e-43 | 155 |
| Msa0638270 | AT2G36400.1 | 57.143 | 119 | 47 | 2 | 26 | 140 | 77 | 195 | 6.78e-41 | 148 |
| Msa0638270 | AT4G37740.1 | 52.055 | 146 | 47 | 5 | 25 | 155 | 164 | 301 | 2.84e-39 | 146 |
| Msa0638270 | AT2G06200.1 | 48.235 | 170 | 71 | 4 | 25 | 182 | 6 | 170 | 1.56e-38 | 138 |
| Msa0638270 | AT2G06200.2 | 48.235 | 170 | 71 | 4 | 25 | 182 | 45 | 209 | 2.54e-38 | 139 |
| Msa0638270 | AT3G52910.1 | 56.250 | 112 | 44 | 2 | 26 | 132 | 83 | 194 | 5.27e-37 | 137 |
| Msa0638270 | AT5G53660.1 | 39.634 | 164 | 71 | 3 | 11 | 174 | 49 | 184 | 1.92e-28 | 114 |
| Msa0638270 | AT4G24150.3 | 41.912 | 136 | 62 | 2 | 9 | 133 | 95 | 224 | 9.04e-26 | 107 |
| Msa0638270 | AT4G24150.2 | 44.275 | 131 | 66 | 3 | 9 | 133 | 133 | 262 | 1.62e-25 | 107 |
| Msa0638270 | AT4G24150.1 | 36.129 | 155 | 69 | 2 | 9 | 133 | 133 | 287 | 1.47e-23 | 102 |
| Msa0638270 | AT2G06200.3 | 51.000 | 100 | 42 | 2 | 85 | 182 | 4 | 98 | 2.19e-23 | 95.9 |
| Msa0638270 | AT2G45480.2 | 50.980 | 102 | 49 | 1 | 29 | 129 | 28 | 129 | 2.57e-20 | 90.5 |
| Msa0638270 | AT2G45480.1 | 50.980 | 102 | 49 | 1 | 29 | 129 | 26 | 127 | 1.08e-19 | 90.5 |
| Msa0638270 | AT2G45480.1 | 50.000 | 66 | 31 | 2 | 83 | 148 | 299 | 362 | 4.34e-13 | 70.5 |
| Msa0638270 | AT2G45480.3 | 50.980 | 102 | 49 | 1 | 29 | 129 | 28 | 129 | 1.11e-19 | 90.1 |
| Msa0638270 | AT2G45480.3 | 50.000 | 66 | 31 | 2 | 83 | 148 | 301 | 364 | 4.74e-13 | 70.5 |
Find 112 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTGATCTTTAAATATA+TGG | 0.195661 | 4_3:+32796006 | Msa0638270:CDS |
| CCATTTGGTTTGGTTTGTTT+TGG | 0.202650 | 4_3:-32795729 | None:intergenic |
| CTTAGGCCATTCGCTGAAAA+AGG | 0.223874 | 4_3:-32798992 | None:intergenic |
| CGCTCACAGTACTTGGAGTC+TGG | 0.273319 | 4_3:-32797085 | None:intergenic |
| GTCCACCTTCTTCCCATAAA+AGG | 0.288851 | 4_3:-32796999 | None:intergenic |
| CAATACCTGTATTCTTTACT+TGG | 0.293844 | 4_3:-32797331 | None:intergenic |
| ATCTTTAAATATATGGTTGC+TGG | 0.294888 | 4_3:+32796013 | Msa0638270:CDS |
| ATGTATCTATCTATCTATCT+AGG | 0.301087 | 4_3:+32795617 | Msa0638270:five_prime_UTR |
| AGTTACTTACAGGTAGGAAT+AGG | 0.318313 | 4_3:-32796115 | None:intergenic |
| AGCTTCTTTGCAGAAGCTTC+AGG | 0.320264 | 4_3:+32798769 | Msa0638270:CDS |
| ATCTGCAACGGTATAATTAC+AGG | 0.327853 | 4_3:-32799208 | None:intergenic |
| TTTCCAGCTGTGACTCCATT+TGG | 0.337205 | 4_3:-32798810 | None:intergenic |
| TCAGTCCTCCTACATCTTCC+TGG | 0.350789 | 4_3:-32797028 | None:intergenic |
| GCCTGTGGAATCACAAACTA+TGG | 0.360463 | 4_3:+32797141 | Msa0638270:CDS |
| GTTCAAAATACTACAGGTTC+TGG | 0.363646 | 4_3:+32797262 | Msa0638270:CDS |
| CTCCTACATCTTCCTGGCTC+CGG | 0.374741 | 4_3:-32797022 | None:intergenic |
| AAGAAGGTGGACCCGGAGCC+AGG | 0.384375 | 4_3:+32797010 | Msa0638270:CDS |
| TAGATAGATAGATACATAGA+TGG | 0.387594 | 4_3:-32795611 | None:intergenic |
| GAGTGAAAACTGGAATGAAT+AGG | 0.396151 | 4_3:-32796064 | None:intergenic |
| CAGGCTTTCTTGAACGGTTG+CGG | 0.396165 | 4_3:-32797123 | None:intergenic |
| CAGAGAGTCATGGTCTGGTT+TGG | 0.398433 | 4_3:+32799017 | Msa0638270:CDS |
| GGAAGAAAGAGAGTGAAAAC+TGG | 0.406980 | 4_3:-32796074 | None:intergenic |
| TCGGAAGGAACCATTTGGTT+TGG | 0.409213 | 4_3:-32795739 | None:intergenic |
| AGGACAAGATCAGGTGGAAC+AGG | 0.419490 | 4_3:-32796040 | None:intergenic |
| CATTTGTTGTGGGAATGTTC+TGG | 0.420078 | 4_3:-32797228 | None:intergenic |
| CATCTTGATACCATTCCCTA+TGG | 0.426022 | 4_3:+32797304 | Msa0638270:CDS |
| GACCATGACTCTCTGCTCTT+AGG | 0.426877 | 4_3:-32799009 | None:intergenic |
| CTTTGTCGGAAGGAACCATT+TGG | 0.431236 | 4_3:-32795744 | None:intergenic |
| ATTCCCACAACAAATGCATT+TGG | 0.432493 | 4_3:+32797235 | Msa0638270:CDS |
| TCCTACATCTTCCTGGCTCC+GGG | 0.435042 | 4_3:-32797021 | None:intergenic |
| AATGGTATCAAGATGATAAT+CGG | 0.435391 | 4_3:-32797296 | None:intergenic |
| CATGTGGCGCTCACAGTACT+TGG | 0.436354 | 4_3:-32797092 | None:intergenic |
| TTATCTAGTGAATATGGATC+TGG | 0.444100 | 4_3:+32798934 | Msa0638270:CDS |
| GACAAAGCTCGATCTGAGTC+TGG | 0.444559 | 4_3:+32795760 | Msa0638270:five_prime_UTR |
| AGACTCAGATCGAGCTTTGT+CGG | 0.451538 | 4_3:-32795758 | None:intergenic |
| GGTAGTGTTCAAAATACTAC+AGG | 0.456240 | 4_3:+32797256 | Msa0638270:CDS |
| CTACCAAATGCATTTGTTGT+GGG | 0.462866 | 4_3:-32797238 | None:intergenic |
| GCTGGTGGCAGCAGCAGAGC+TGG | 0.465144 | 4_3:+32797199 | Msa0638270:CDS |
| TGTATCTATCTATCTATCTA+GGG | 0.465892 | 4_3:+32795618 | Msa0638270:five_prime_UTR |
| GCCATAGTTTGTGATTCCAC+AGG | 0.467528 | 4_3:-32797142 | None:intergenic |
| GTTACTTACAGGTAGGAATA+GGG | 0.471074 | 4_3:-32796114 | None:intergenic |
| TGTGGAGAATGCTGTTTGGT+TGG | 0.482035 | 4_3:-32799052 | None:intergenic |
| GGTGTTGATTGTGTTATGTC+CGG | 0.486230 | 4_3:-32795703 | None:intergenic |
| TTCTTTACTTGGAATCCCAT+AGG | 0.487767 | 4_3:-32797320 | None:intergenic |
| ATTCCACAGGCTTTCTTGAA+CGG | 0.489637 | 4_3:-32797129 | None:intergenic |
| TAATTGAACAGGTATCTTCA+AGG | 0.495908 | 4_3:+32798721 | Msa0638270:intron |
| AGGGTGGTGAAAGAAGTTAT+TGG | 0.499297 | 4_3:-32796095 | None:intergenic |
| TGAATAGGAAGGACAAGATC+AGG | 0.504204 | 4_3:-32796049 | None:intergenic |
| AGACAACAAGGGTCTCCAAA+TGG | 0.506033 | 4_3:+32798795 | Msa0638270:CDS |
| TCTCCAAATGGAGTCACAGC+TGG | 0.506829 | 4_3:+32798807 | Msa0638270:CDS |
| CGGTGAGATATATTCAAGTT+CGG | 0.507767 | 4_3:+32799143 | Msa0638270:CDS |
| GAGTTGTGGAGAATGCTGTT+TGG | 0.516076 | 4_3:-32799056 | None:intergenic |
| CCAAAACAAACCAAACCAAA+TGG | 0.517739 | 4_3:+32795729 | Msa0638270:five_prime_UTR |
| CGGAGGTGTAGGGATGATGA+TGG | 0.523373 | 4_3:+32795928 | Msa0638270:CDS |
| AGTAGTAACAACGGAGGTGT+AGG | 0.523982 | 4_3:+32795917 | Msa0638270:CDS |
| GGATTCCAAGTAAAGAATAC+AGG | 0.527798 | 4_3:+32797326 | Msa0638270:CDS |
| TCTTTACTTGGAATCCCATA+GGG | 0.529110 | 4_3:-32797319 | None:intergenic |
| GGAAGATGTAGGAGGACTGA+TGG | 0.529508 | 4_3:+32797031 | Msa0638270:CDS |
| TTATGGGAAGAAGGTGGACC+CGG | 0.531013 | 4_3:+32797003 | Msa0638270:CDS |
| TGGAGAAGCTGTGAAGGAAG+AGG | 0.531350 | 4_3:+32798954 | Msa0638270:CDS |
| AAGAGCAGAGAGTCATGGTC+TGG | 0.532638 | 4_3:+32799012 | Msa0638270:CDS |
| ACTACCAAATGCATTTGTTG+TGG | 0.537213 | 4_3:-32797239 | None:intergenic |
| CTTCACAGTGTCTCAGTGGC+AGG | 0.545162 | 4_3:+32795970 | Msa0638270:CDS |
| GGGATAATCACTTTGCAACA+TGG | 0.547856 | 4_3:-32798899 | None:intergenic |
| ACTTGGAATCCCATAGGGAA+TGG | 0.549125 | 4_3:-32797314 | None:intergenic |
| AGCTTCAGGAGGAGACAACA+AGG | 0.549332 | 4_3:+32798783 | Msa0638270:CDS |
| GAGAAGTCAGACGATGACAT+AGG | 0.553675 | 4_3:-32799096 | None:intergenic |
| GTCAGACGATGACATAGGAA+TGG | 0.557702 | 4_3:-32799091 | None:intergenic |
| GCTCACAGTACTTGGAGTCT+GGG | 0.561352 | 4_3:-32797084 | None:intergenic |
| ATACTAACATAGCATCCATC+CGG | 0.569488 | 4_3:+32795684 | Msa0638270:five_prime_UTR |
| ATCTTGATACCATTCCCTAT+GGG | 0.573222 | 4_3:+32797305 | Msa0638270:CDS |
| TCTTCAAGGTCTTAAATCTG+AGG | 0.573656 | 4_3:+32798735 | Msa0638270:CDS |
| TGGATCTGGAGAAGCTGTGA+AGG | 0.577779 | 4_3:+32798948 | Msa0638270:CDS |
| GGAGAAGCTGTGAAGGAAGA+GGG | 0.582664 | 4_3:+32798955 | Msa0638270:CDS |
| GTAGTAACAACGGAGGTGTA+GGG | 0.587459 | 4_3:+32795918 | Msa0638270:CDS |
| TTCTTTGCAGAAGCTTCAGG+AGG | 0.588543 | 4_3:+32798772 | Msa0638270:CDS |
| GGTAGTACAAGTATTTGACT+TGG | 0.595236 | 4_3:+32795651 | Msa0638270:five_prime_UTR |
| TCAGATCGAGCTTTGTCGGA+AGG | 0.597590 | 4_3:-32795754 | None:intergenic |
| GGATATTGAAAGTTGAGTTG+TGG | 0.598447 | 4_3:-32799070 | None:intergenic |
| GTGACATCGCTAACTGTCGC+TGG | 0.600432 | 4_3:+32797181 | Msa0638270:CDS |
| CTTCAAGGTCTTAAATCTGA+GGG | 0.600678 | 4_3:+32798736 | Msa0638270:CDS |
| TTGATTGTGTTATGTCCGGA+TGG | 0.601053 | 4_3:-32795699 | None:intergenic |
| AAAAGTATGAATAGCTCTGG+TGG | 0.606971 | 4_3:+32795890 | Msa0638270:exon |
| GAAAACTGGAATGAATAGGA+AGG | 0.611240 | 4_3:-32796060 | None:intergenic |
| GGGAGTTGAAGGGTACAATG+AGG | 0.616424 | 4_3:+32795577 | None:intergenic |
| CACCCTTCACAGTGTCTCAG+TGG | 0.621198 | 4_3:+32795966 | Msa0638270:CDS |
| GGTTGCGGCCACGATGCATG+TGG | 0.624950 | 4_3:-32797108 | None:intergenic |
| GGCCTAAGAGCAGAGAGTCA+TGG | 0.630587 | 4_3:+32799007 | Msa0638270:CDS |
| AGTATGAATAGCTCTGGTGG+TGG | 0.634205 | 4_3:+32795893 | Msa0638270:exon |
| CAACCGTTCAAGAAAGCCTG+TGG | 0.634486 | 4_3:+32797126 | Msa0638270:CDS |
| GTATCTATCTATCTATCTAG+GGG | 0.641720 | 4_3:+32795619 | Msa0638270:five_prime_UTR |
| GCAACTCTAGTTGACATCAA+AGG | 0.643622 | 4_3:-32798841 | None:intergenic |
| CGGAGCCAGGAAGATGTAGG+AGG | 0.644072 | 4_3:+32797023 | Msa0638270:CDS |
| ACCCGGAGCCAGGAAGATGT+AGG | 0.647650 | 4_3:+32797020 | Msa0638270:CDS |
| TGCCACTGAGACACTGTGAA+GGG | 0.647925 | 4_3:-32795968 | None:intergenic |
| GGAGGTGTAGGGATGATGAT+GGG | 0.651275 | 4_3:+32795929 | Msa0638270:CDS |
| ACAAGCTCTCAGTCGCCACA+CGG | 0.652578 | 4_3:+32799123 | Msa0638270:CDS |
| ACTGCTCTAGTTATCTGCAA+CGG | 0.658929 | 4_3:-32799220 | None:intergenic |
| ATAGGAAGGACAAGATCAGG+TGG | 0.667033 | 4_3:-32796046 | None:intergenic |
| CTGCCACTGAGACACTGTGA+AGG | 0.667964 | 4_3:-32795969 | None:intergenic |
| ACATCGCTAACTGTCGCTGG+TGG | 0.682168 | 4_3:+32797184 | Msa0638270:CDS |
| AGTCACAGCTGGAAAACACA+TGG | 0.689809 | 4_3:+32798818 | Msa0638270:CDS |
| CAAGGTCTTAAATCTGAGGG+TGG | 0.691896 | 4_3:+32798739 | Msa0638270:CDS |
| GCTTCAGGAGGAGACAACAA+GGG | 0.694886 | 4_3:+32798784 | Msa0638270:CDS |
| TATCAAGATGATAATCGGCA+CGG | 0.696821 | 4_3:-32797291 | None:intergenic |
| GGTGGTGGCAGTAGTAACAA+CGG | 0.699810 | 4_3:+32795908 | Msa0638270:CDS |
| CTTGAATATATCTCACCGTG+TGG | 0.701692 | 4_3:-32799138 | None:intergenic |
| TATCTATCTATCTATCTAGG+GGG | 0.702581 | 4_3:+32795620 | Msa0638270:five_prime_UTR |
| ACTTACAGGTAGGAATAGGG+TGG | 0.711937 | 4_3:-32796111 | None:intergenic |
| TGTGAGCGCCACATGCATCG+TGG | 0.717232 | 4_3:+32797100 | Msa0638270:CDS |
| GACAGTTAGCGATGTCACAG+TGG | 0.746561 | 4_3:-32797176 | None:intergenic |
| GGTGGCAGTAGTAACAACGG+AGG | 0.768714 | 4_3:+32795911 | Msa0638270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAATAAATAAAAAATT+AGG | - | chr4_3:32796517-32796536 | None:intergenic | 0.0% |
| !! | AAAAAAAATAATAACTTCAT+TGG | - | chr4_3:32796303-32796322 | None:intergenic | 10.0% |
| !!! | TTATATTAAAACAACTTTTT+TGG | + | chr4_3:32797953-32797972 | Msa0638270:intron | 10.0% |
| !! | GAGATAATAATTTAAGAAAA+TGG | + | chr4_3:32796596-32796615 | Msa0638270:intron | 15.0% |
| !!! | TTTTTTGCATTATTCAATTA+TGG | + | chr4_3:32796839-32796858 | Msa0638270:intron | 15.0% |
| !! | ATAATACTATGTTTATAACA+TGG | + | chr4_3:32797539-32797558 | Msa0638270:intron | 15.0% |
| !!! | TTTCTTTTCAATATTGAAAA+AGG | + | chr4_3:32797673-32797692 | Msa0638270:intron | 15.0% |
| !!! | TTCTTTTCAATATTGAAAAA+GGG | + | chr4_3:32797674-32797693 | Msa0638270:intron | 15.0% |
| !! | TAATATAAACTTCATATTCT+AGG | - | chr4_3:32797941-32797960 | None:intergenic | 15.0% |
| !!! | AGCTTTGATCTTTAAATATA+TGG | + | chr4_3:32796006-32796025 | Msa0638270:CDS | 20.0% |
| !!! | TGAATATTTCTTATTGATTG+TGG | + | chr4_3:32796895-32796914 | Msa0638270:intron | 20.0% |
| !! | GTGAAATGATATACATAATA+AGG | - | chr4_3:32797361-32797380 | None:intergenic | 20.0% |
| !! | TTGAAAAGAAAATTGTAAGA+AGG | - | chr4_3:32797664-32797683 | None:intergenic | 20.0% |
| !!! | ATGTCTTCTAATTTTACTTT+CGG | + | chr4_3:32798087-32798106 | Msa0638270:intron | 20.0% |
| !!! | TTCTTTAATTTCCAACAAAA+GGG | + | chr4_3:32798126-32798145 | Msa0638270:intron | 20.0% |
| !! | GAAACTAAATGAAAAAACAA+AGG | - | chr4_3:32798459-32798478 | None:intergenic | 20.0% |
| !! | TTTCCTTTCAATCAATTTAA+TGG | + | chr4_3:32798475-32798494 | Msa0638270:intron | 20.0% |
| !! | TTCCTTTCAATCAATTTAAT+GGG | + | chr4_3:32798476-32798495 | Msa0638270:intron | 20.0% |
| !! | ACTAGATAAAAATGAATGTT+GGG | - | chr4_3:32798923-32798942 | None:intergenic | 20.0% |
| !!! | TCATTTTTATCTAGTGAATA+TGG | + | chr4_3:32798928-32798947 | Msa0638270:CDS | 20.0% |
| ! | TAGATAGATAGATACATAGA+TGG | - | chr4_3:32795614-32795633 | None:intergenic | 25.0% |
| ! | ATGTATCTATCTATCTATCT+AGG | + | chr4_3:32795617-32795636 | Msa0638270:five_prime_UTR | 25.0% |
| ! | TGTATCTATCTATCTATCTA+GGG | + | chr4_3:32795618-32795637 | Msa0638270:five_prime_UTR | 25.0% |
| ! | ATCTTTAAATATATGGTTGC+TGG | + | chr4_3:32796013-32796032 | Msa0638270:CDS | 25.0% |
| ! | TTAGTTAGTTAGTTACTTAC+AGG | - | chr4_3:32796128-32796147 | None:intergenic | 25.0% |
| !! | AAAGTTAGTTAGTTGATTCT+TGG | + | chr4_3:32796463-32796482 | Msa0638270:intron | 25.0% |
| ! | TTGAATGTAACTACATGTAT+TGG | + | chr4_3:32796625-32796644 | Msa0638270:intron | 25.0% |
| ! | AATGGTATCAAGATGATAAT+CGG | - | chr4_3:32797299-32797318 | None:intergenic | 25.0% |
| !! | ACTTGTTGATTGCTTTAAAT+TGG | + | chr4_3:32797381-32797400 | Msa0638270:intron | 25.0% |
| !!! | ATTTTTTGTTCCATTCTCTT+CGG | - | chr4_3:32797420-32797439 | None:intergenic | 25.0% |
| !! | AGTTATTGGTTACTTTCTTT+GGG | + | chr4_3:32797635-32797654 | Msa0638270:intron | 25.0% |
| ! | TTGTTCTCTATATTTGTGTT+GGG | + | chr4_3:32797757-32797776 | Msa0638270:intron | 25.0% |
| ! | TCAAAATGTCATTCAAAAAG+TGG | - | chr4_3:32797849-32797868 | None:intergenic | 25.0% |
| ! | TCTAGGAATAAATAAATGCA+TGG | - | chr4_3:32797924-32797943 | None:intergenic | 25.0% |
| !!! | CATTTTAGCATGTTAATATG+TGG | + | chr4_3:32797999-32798018 | Msa0638270:intron | 25.0% |
| !! | CTTTTGTTGGAAATTAAAGA+AGG | - | chr4_3:32798127-32798146 | None:intergenic | 25.0% |
| !! | CTTCTTTAATTTCCAACAAA+AGG | + | chr4_3:32798125-32798144 | Msa0638270:intron | 25.0% |
| !! | TGCAAATTTTATTCTTTTCG+TGG | + | chr4_3:32798187-32798206 | Msa0638270:intron | 25.0% |
| ! | CTTGTATGATTAAATATGAC+TGG | + | chr4_3:32798623-32798642 | Msa0638270:intron | 25.0% |
| ! | AAGATACCTGTTCAATTAAA+CGG | - | chr4_3:32798719-32798738 | None:intergenic | 25.0% |
| ! | CTAGATAAAAATGAATGTTG+GGG | - | chr4_3:32798922-32798941 | None:intergenic | 25.0% |
| ! | CACTAGATAAAAATGAATGT+TGG | - | chr4_3:32798924-32798943 | None:intergenic | 25.0% |
| GTATCTATCTATCTATCTAG+GGG | + | chr4_3:32795619-32795638 | Msa0638270:five_prime_UTR | 30.0% | |
| TATCTATCTATCTATCTAGG+GGG | + | chr4_3:32795620-32795639 | Msa0638270:five_prime_UTR | 30.0% | |
| ! | AGAAAAAGTATGAATAGCTC+TGG | + | chr4_3:32795887-32795906 | Msa0638270:exon | 30.0% |
| TTAGTTAGTTACTTACAGGT+AGG | - | chr4_3:32796124-32796143 | None:intergenic | 30.0% | |
| CATCAAATATGCAGCTATTA+GGG | - | chr4_3:32796250-32796269 | None:intergenic | 30.0% | |
| TCATCAAATATGCAGCTATT+AGG | - | chr4_3:32796251-32796270 | None:intergenic | 30.0% | |
| ACTTTGGATTAAAGACATGT+CGG | - | chr4_3:32796666-32796685 | None:intergenic | 30.0% | |
| ATGTCTTTAATCCAAAGTGT+CGG | + | chr4_3:32796668-32796687 | Msa0638270:intron | 30.0% | |
| AATCCAAATTGACAGATAGT+GGG | - | chr4_3:32796735-32796754 | None:intergenic | 30.0% | |
| AAATCCAAATTGACAGATAG+TGG | - | chr4_3:32796736-32796755 | None:intergenic | 30.0% | |
| ATCTATGTCTCTCTCAAAAA+TGG | - | chr4_3:32796765-32796784 | None:intergenic | 30.0% | |
| !! | TTTTGAGAGAGACATAGATT+TGG | + | chr4_3:32796766-32796785 | Msa0638270:intron | 30.0% |
| ! | TTTCTTATTGATTGTGGTCT+AGG | + | chr4_3:32796901-32796920 | Msa0638270:intron | 30.0% |
| ! | TTCTTATTGATTGTGGTCTA+GGG | + | chr4_3:32796902-32796921 | Msa0638270:intron | 30.0% |
| GTAAATTTACAAGCACAGTT+AGG | - | chr4_3:32796965-32796984 | None:intergenic | 30.0% | |
| ! | TGAGTTACTGTTCCTTTTAT+GGG | + | chr4_3:32796987-32797006 | Msa0638270:CDS | 30.0% |
| CAATACCTGTATTCTTTACT+TGG | - | chr4_3:32797334-32797353 | None:intergenic | 30.0% | |
| ! | ATACTTTTAACCGAAGAGAA+TGG | + | chr4_3:32797407-32797426 | Msa0638270:intron | 30.0% |
| AAACTCAACTGCACAATAAT+GGG | - | chr4_3:32797508-32797527 | None:intergenic | 30.0% | |
| CAACAATTTACACAAAGATG+TGG | - | chr4_3:32797602-32797621 | None:intergenic | 30.0% | |
| GAAAGAATGACAAGAGTTAT+TGG | + | chr4_3:32797621-32797640 | Msa0638270:intron | 30.0% | |
| ! | GAGTTATTGGTTACTTTCTT+TGG | + | chr4_3:32797634-32797653 | Msa0638270:intron | 30.0% |
| CATAGACAAAATAACAGTTG+AGG | - | chr4_3:32797722-32797741 | None:intergenic | 30.0% | |
| CTTGTTCTCTATATTTGTGT+TGG | + | chr4_3:32797756-32797775 | Msa0638270:intron | 30.0% | |
| TGTCATTCAAAAAGTGGTTT+GGG | - | chr4_3:32797843-32797862 | None:intergenic | 30.0% | |
| ATGTCATTCAAAAAGTGGTT+TGG | - | chr4_3:32797844-32797863 | None:intergenic | 30.0% | |
| !! | ACATTTTGACAAAATTGCGA+GGG | + | chr4_3:32797860-32797879 | Msa0638270:intron | 30.0% |
| AAATTTGCAGCTAGATTTGA+AGG | - | chr4_3:32798176-32798195 | None:intergenic | 30.0% | |
| TGACGTCAGACAAATTTATT+TGG | + | chr4_3:32798352-32798371 | Msa0638270:intron | 30.0% | |
| GACGTCAGACAAATTTATTT+GGG | + | chr4_3:32798353-32798372 | Msa0638270:intron | 30.0% | |
| GTCCCATTAAATTGATTGAA+AGG | - | chr4_3:32798481-32798500 | None:intergenic | 30.0% | |
| AATTTAATGGGACCTTGATT+CGG | + | chr4_3:32798488-32798507 | Msa0638270:intron | 30.0% | |
| CAAACGAAAAATCATGAAGA+TGG | - | chr4_3:32798558-32798577 | None:intergenic | 30.0% | |
| ! | TTCGTTTGTAGTATTGAACA+TGG | + | chr4_3:32798570-32798589 | Msa0638270:intron | 30.0% |
| GCAACAAATTATAAGCGAAA+AGG | + | chr4_3:32798648-32798667 | Msa0638270:intron | 30.0% | |
| !!! | TCTTTTTTTACTACATGACG+TGG | + | chr4_3:32798673-32798692 | Msa0638270:intron | 30.0% |
| AGATACCTGTTCAATTAAAC+GGG | - | chr4_3:32798718-32798737 | None:intergenic | 30.0% | |
| TAATTGAACAGGTATCTTCA+AGG | + | chr4_3:32798721-32798740 | Msa0638270:intron | 30.0% | |
| !! | TGATTTTGATGCAGAAAAAG+AGG | - | chr4_3:32798866-32798885 | None:intergenic | 30.0% |
| TTATCTAGTGAATATGGATC+TGG | + | chr4_3:32798934-32798953 | Msa0638270:CDS | 30.0% | |
| GGTAGTACAAGTATTTGACT+TGG | + | chr4_3:32795651-32795670 | Msa0638270:five_prime_UTR | 35.0% | |
| ATACTAACATAGCATCCATC+CGG | + | chr4_3:32795684-32795703 | Msa0638270:five_prime_UTR | 35.0% | |
| !!! | TGGTTTGGTTTGTTTTGGTT+CGG | - | chr4_3:32795727-32795746 | None:intergenic | 35.0% |
| !!! | CCATTTGGTTTGGTTTGTTT+TGG | - | chr4_3:32795732-32795751 | None:intergenic | 35.0% |
| CCAAAACAAACCAAACCAAA+TGG | + | chr4_3:32795729-32795748 | Msa0638270:five_prime_UTR | 35.0% | |
| !! | AAAAGTATGAATAGCTCTGG+TGG | + | chr4_3:32795890-32795909 | Msa0638270:exon | 35.0% |
| GAAAACTGGAATGAATAGGA+AGG | - | chr4_3:32796063-32796082 | None:intergenic | 35.0% | |
| GAGTGAAAACTGGAATGAAT+AGG | - | chr4_3:32796067-32796086 | None:intergenic | 35.0% | |
| GTTACTTACAGGTAGGAATA+GGG | - | chr4_3:32796117-32796136 | None:intergenic | 35.0% | |
| AGTTACTTACAGGTAGGAAT+AGG | - | chr4_3:32796118-32796137 | None:intergenic | 35.0% | |
| ATAACTTCATTGGATCTCTC+AGG | - | chr4_3:32796293-32796312 | None:intergenic | 35.0% | |
| !! | TCTTGGCTTGTTACTTTAGA+AGG | + | chr4_3:32796480-32796499 | Msa0638270:intron | 35.0% |
| !! | CTTGGCTTGTTACTTTAGAA+GGG | + | chr4_3:32796481-32796500 | Msa0638270:intron | 35.0% |
| ATGTGTGTGCAAACAATAGA+GGG | - | chr4_3:32796546-32796565 | None:intergenic | 35.0% | |
| !! | TACATGTATTGGTGTTGTGT+CGG | + | chr4_3:32796636-32796655 | Msa0638270:intron | 35.0% |
| TTTCCCACTATCTGTCAATT+TGG | + | chr4_3:32796729-32796748 | Msa0638270:intron | 35.0% | |
| ! | GTGAGTTACTGTTCCTTTTA+TGG | + | chr4_3:32796986-32797005 | Msa0638270:intron | 35.0% |
| ATTCCCACAACAAATGCATT+TGG | + | chr4_3:32797235-32797254 | Msa0638270:CDS | 35.0% | |
| !! | CTACCAAATGCATTTGTTGT+GGG | - | chr4_3:32797241-32797260 | None:intergenic | 35.0% |
| ! | ACTACCAAATGCATTTGTTG+TGG | - | chr4_3:32797242-32797261 | None:intergenic | 35.0% |
| GGTAGTGTTCAAAATACTAC+AGG | + | chr4_3:32797256-32797275 | Msa0638270:CDS | 35.0% | |
| GTTCAAAATACTACAGGTTC+TGG | + | chr4_3:32797262-32797281 | Msa0638270:CDS | 35.0% | |
| TATCAAGATGATAATCGGCA+CGG | - | chr4_3:32797294-32797313 | None:intergenic | 35.0% | |
| ATCTTGATACCATTCCCTAT+GGG | + | chr4_3:32797305-32797324 | Msa0638270:CDS | 35.0% | |
| TCTTTACTTGGAATCCCATA+GGG | - | chr4_3:32797322-32797341 | None:intergenic | 35.0% | |
| TTCTTTACTTGGAATCCCAT+AGG | - | chr4_3:32797323-32797342 | None:intergenic | 35.0% | |
| GGATTCCAAGTAAAGAATAC+AGG | + | chr4_3:32797326-32797345 | Msa0638270:CDS | 35.0% | |
| GAAACTCAACTGCACAATAA+TGG | - | chr4_3:32797509-32797528 | None:intergenic | 35.0% | |
| !! | GACATTTTGACAAAATTGCG+AGG | + | chr4_3:32797859-32797878 | Msa0638270:intron | 35.0% |
| TCAAAGAGAGCAACATGATA+TGG | - | chr4_3:32798216-32798235 | None:intergenic | 35.0% | |
| TTCAAAGCTTGAACTTCTGA+TGG | + | chr4_3:32798424-32798443 | Msa0638270:intron | 35.0% | |
| ATGATGAACTTACCGAATCA+AGG | - | chr4_3:32798503-32798522 | None:intergenic | 35.0% | |
| ! | GATTCGGTAAGTTCATCATA+TGG | + | chr4_3:32798504-32798523 | Msa0638270:intron | 35.0% |
| TCTTCAAGGTCTTAAATCTG+AGG | + | chr4_3:32798735-32798754 | Msa0638270:CDS | 35.0% | |
| CTTCAAGGTCTTAAATCTGA+GGG | + | chr4_3:32798736-32798755 | Msa0638270:CDS | 35.0% | |
| ! | GGATATTGAAAGTTGAGTTG+TGG | - | chr4_3:32799073-32799092 | None:intergenic | 35.0% |
| ! | CGGTGAGATATATTCAAGTT+CGG | + | chr4_3:32799143-32799162 | Msa0638270:CDS | 35.0% |
| ATCTGCAACGGTATAATTAC+AGG | - | chr4_3:32799211-32799230 | None:intergenic | 35.0% | |
| TTGATTGTGTTATGTCCGGA+TGG | - | chr4_3:32795702-32795721 | None:intergenic | 40.0% | |
| !! | GGTGTTGATTGTGTTATGTC+CGG | - | chr4_3:32795706-32795725 | None:intergenic | 40.0% |
| TGAATAGGAAGGACAAGATC+AGG | - | chr4_3:32796052-32796071 | None:intergenic | 40.0% | |
| GGAAGAAAGAGAGTGAAAAC+TGG | - | chr4_3:32796077-32796096 | None:intergenic | 40.0% | |
| AGGGTGGTGAAAGAAGTTAT+TGG | - | chr4_3:32796098-32796117 | None:intergenic | 40.0% | |
| TTGGATCTCTCAGGAACAAA+GGG | - | chr4_3:32796284-32796303 | None:intergenic | 40.0% | |
| ATTGGATCTCTCAGGAACAA+AGG | - | chr4_3:32796285-32796304 | None:intergenic | 40.0% | |
| !! | GATTCTCTCTGGAGTCAATT+TGG | - | chr4_3:32796349-32796368 | None:intergenic | 40.0% |
| CATGTGTGTGCAAACAATAG+AGG | - | chr4_3:32796547-32796566 | None:intergenic | 40.0% | |
| !! | AATGTTTTGCACCGACACTT+TGG | - | chr4_3:32796682-32796701 | None:intergenic | 40.0% |
| ! | CTGTTCCTTTTATGGGAAGA+AGG | + | chr4_3:32796994-32797013 | Msa0638270:CDS | 40.0% |
| ! | TTCCTTTTATGGGAAGAAGG+TGG | + | chr4_3:32796997-32797016 | Msa0638270:CDS | 40.0% |
| !! | AAAAAAGTGGAGGTGCTCTA+AGG | + | chr4_3:32797054-32797073 | Msa0638270:CDS | 40.0% |
| ATTCCACAGGCTTTCTTGAA+CGG | - | chr4_3:32797132-32797151 | None:intergenic | 40.0% | |
| !! | CATTTGTTGTGGGAATGTTC+TGG | - | chr4_3:32797231-32797250 | None:intergenic | 40.0% |
| CATCTTGATACCATTCCCTA+TGG | + | chr4_3:32797304-32797323 | Msa0638270:CDS | 40.0% | |
| CTAATGCTTGTGAATCTCTG+TGG | - | chr4_3:32797577-32797596 | None:intergenic | 40.0% | |
| !! | TCATGGAGATCTACTGATTC+CGG | - | chr4_3:32797816-32797835 | None:intergenic | 40.0% |
| ! | AAAGTGGTTTGGGTGATTCA+TGG | - | chr4_3:32797833-32797852 | None:intergenic | 40.0% |
| AAAATTGCGAGGGAGAAAGA+CGG | + | chr4_3:32797870-32797889 | Msa0638270:intron | 40.0% | |
| ! | AGCATCAAACACCCTTTTGT+TGG | - | chr4_3:32798140-32798159 | None:intergenic | 40.0% |
| GCAACTCTAGTTGACATCAA+AGG | - | chr4_3:32798844-32798863 | None:intergenic | 40.0% | |
| GGGATAATCACTTTGCAACA+TGG | - | chr4_3:32798902-32798921 | None:intergenic | 40.0% | |
| TTAGGCCATTCGCTGAAAAA+GGG | - | chr4_3:32798994-32799013 | None:intergenic | 40.0% | |
| CTTGAATATATCTCACCGTG+TGG | - | chr4_3:32799141-32799160 | None:intergenic | 40.0% | |
| TCTATCTAGGGGGAGTTGAA+TGG | + | chr4_3:32795630-32795649 | Msa0638270:five_prime_UTR | 45.0% | |
| TCGGAAGGAACCATTTGGTT+TGG | - | chr4_3:32795742-32795761 | None:intergenic | 45.0% | |
| CTTTGTCGGAAGGAACCATT+TGG | - | chr4_3:32795747-32795766 | None:intergenic | 45.0% | |
| ! | AGACTCAGATCGAGCTTTGT+CGG | - | chr4_3:32795761-32795780 | None:intergenic | 45.0% |
| !! | AGTATGAATAGCTCTGGTGG+TGG | + | chr4_3:32795893-32795912 | Msa0638270:exon | 45.0% |
| ! | AGTAGTAACAACGGAGGTGT+AGG | + | chr4_3:32795917-32795936 | Msa0638270:CDS | 45.0% |
| ! | GTAGTAACAACGGAGGTGTA+GGG | + | chr4_3:32795918-32795937 | Msa0638270:CDS | 45.0% |
| ATAGGAAGGACAAGATCAGG+TGG | - | chr4_3:32796049-32796068 | None:intergenic | 45.0% | |
| ACTTACAGGTAGGAATAGGG+TGG | - | chr4_3:32796114-32796133 | None:intergenic | 45.0% | |
| TGGATCTCTCAGGAACAAAG+GGG | - | chr4_3:32796283-32796302 | None:intergenic | 45.0% | |
| CATTCGATCGTAACCCACTT+GGG | - | chr4_3:32796432-32796451 | None:intergenic | 45.0% | |
| TCATTCGATCGTAACCCACT+TGG | - | chr4_3:32796433-32796452 | None:intergenic | 45.0% | |
| ! | CTAGGGTGTGTCTGAAATGT+TGG | + | chr4_3:32796919-32796938 | Msa0638270:intron | 45.0% |
| GTCCACCTTCTTCCCATAAA+AGG | - | chr4_3:32797002-32797021 | None:intergenic | 45.0% | |
| GGAGGACTGATGGAAAAAAG+TGG | + | chr4_3:32797041-32797060 | Msa0638270:CDS | 45.0% | |
| GGACTGATGGAAAAAAGTGG+AGG | + | chr4_3:32797044-32797063 | Msa0638270:CDS | 45.0% | |
| GCCTGTGGAATCACAAACTA+TGG | + | chr4_3:32797141-32797160 | Msa0638270:CDS | 45.0% | |
| ! | GCCATAGTTTGTGATTCCAC+AGG | - | chr4_3:32797145-32797164 | None:intergenic | 45.0% |
| ACTTGGAATCCCATAGGGAA+TGG | - | chr4_3:32797317-32797336 | None:intergenic | 45.0% | |
| GAGGGCTAGGTATTAGATAC+CGG | + | chr4_3:32797794-32797813 | Msa0638270:intron | 45.0% | |
| TTATCCCCATGTGACAGCTA+TGG | - | chr4_3:32798041-32798060 | None:intergenic | 45.0% | |
| TCACATGGGGATAATGAGCA+AGG | + | chr4_3:32798047-32798066 | Msa0638270:intron | 45.0% | |
| ATGGGGATAATGAGCAAGGT+AGG | + | chr4_3:32798051-32798070 | Msa0638270:intron | 45.0% | |
| CAAGGTCTTAAATCTGAGGG+TGG | + | chr4_3:32798739-32798758 | Msa0638270:CDS | 45.0% | |
| AGCTTCTTTGCAGAAGCTTC+AGG | + | chr4_3:32798769-32798788 | Msa0638270:CDS | 45.0% | |
| TTCTTTGCAGAAGCTTCAGG+AGG | + | chr4_3:32798772-32798791 | Msa0638270:CDS | 45.0% | |
| AGACAACAAGGGTCTCCAAA+TGG | + | chr4_3:32798795-32798814 | Msa0638270:CDS | 45.0% | |
| TTTCCAGCTGTGACTCCATT+TGG | - | chr4_3:32798813-32798832 | None:intergenic | 45.0% | |
| AGTCACAGCTGGAAAACACA+TGG | + | chr4_3:32798818-32798837 | Msa0638270:CDS | 45.0% | |
| !!! | TTCGACCCTTTTTCAGCGAA+TGG | + | chr4_3:32798986-32799005 | Msa0638270:CDS | 45.0% |
| CTTAGGCCATTCGCTGAAAA+AGG | - | chr4_3:32798995-32799014 | None:intergenic | 45.0% | |
| ! | TGTGGAGAATGCTGTTTGGT+TGG | - | chr4_3:32799055-32799074 | None:intergenic | 45.0% |
| GAGTTGTGGAGAATGCTGTT+TGG | - | chr4_3:32799059-32799078 | None:intergenic | 45.0% | |
| GTCAGACGATGACATAGGAA+TGG | - | chr4_3:32799094-32799113 | None:intergenic | 45.0% | |
| GAGAAGTCAGACGATGACAT+AGG | - | chr4_3:32799099-32799118 | None:intergenic | 45.0% | |
| ! | TCAGATCGAGCTTTGTCGGA+AGG | - | chr4_3:32795757-32795776 | None:intergenic | 50.0% |
| GACAAAGCTCGATCTGAGTC+TGG | + | chr4_3:32795760-32795779 | Msa0638270:five_prime_UTR | 50.0% | |
| ! | GGTGGTGGCAGTAGTAACAA+CGG | + | chr4_3:32795908-32795927 | Msa0638270:CDS | 50.0% |
| ! | GGAGGTGTAGGGATGATGAT+GGG | + | chr4_3:32795929-32795948 | Msa0638270:CDS | 50.0% |
| TGCCACTGAGACACTGTGAA+GGG | - | chr4_3:32795971-32795990 | None:intergenic | 50.0% | |
| AGGACAAGATCAGGTGGAAC+AGG | - | chr4_3:32796043-32796062 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+TGG | - | chr4_3:32796360-32796379 | None:intergenic | 50.0% | |
| GAATCGAACCTGAGACCTTG+AGG | + | chr4_3:32796364-32796383 | Msa0638270:intron | 50.0% | |
| ATACTCCTCCTCAAGGTCTC+AGG | - | chr4_3:32796375-32796394 | None:intergenic | 50.0% | |
| ! | TGGGAGTATACTCCTCCTCA+AGG | - | chr4_3:32796382-32796401 | None:intergenic | 50.0% |
| ! | TTGAGGAGGAGTATACTCCC+AGG | + | chr4_3:32796381-32796400 | Msa0638270:intron | 50.0% |
| !! | GTGGTATTGGCTTGAGACCT+GGG | - | chr4_3:32796401-32796420 | None:intergenic | 50.0% |
| !! | AGTGGTATTGGCTTGAGACC+TGG | - | chr4_3:32796402-32796421 | None:intergenic | 50.0% |
| !! | TTGGGTTGGCTCAGTGGTAT+TGG | - | chr4_3:32796414-32796433 | None:intergenic | 50.0% |
| TTATGGGAAGAAGGTGGACC+CGG | + | chr4_3:32797003-32797022 | Msa0638270:CDS | 50.0% | |
| TCAGTCCTCCTACATCTTCC+TGG | - | chr4_3:32797031-32797050 | None:intergenic | 50.0% | |
| GGAAGATGTAGGAGGACTGA+TGG | + | chr4_3:32797031-32797050 | Msa0638270:CDS | 50.0% | |
| GCTCACAGTACTTGGAGTCT+GGG | - | chr4_3:32797087-32797106 | None:intergenic | 50.0% | |
| CAGGCTTTCTTGAACGGTTG+CGG | - | chr4_3:32797126-32797145 | None:intergenic | 50.0% | |
| CAACCGTTCAAGAAAGCCTG+TGG | + | chr4_3:32797126-32797145 | Msa0638270:CDS | 50.0% | |
| GACAGTTAGCGATGTCACAG+TGG | - | chr4_3:32797179-32797198 | None:intergenic | 50.0% | |
| TTGGGTGATACTCTGACACG+AGG | + | chr4_3:32797775-32797794 | Msa0638270:intron | 50.0% | |
| TGGGTGATACTCTGACACGA+GGG | + | chr4_3:32797776-32797795 | Msa0638270:intron | 50.0% | |
| CGTCGCCCGTTTAATTGAAC+AGG | + | chr4_3:32798710-32798729 | Msa0638270:intron | 50.0% | |
| AGCTTCAGGAGGAGACAACA+AGG | + | chr4_3:32798783-32798802 | Msa0638270:CDS | 50.0% | |
| GCTTCAGGAGGAGACAACAA+GGG | + | chr4_3:32798784-32798803 | Msa0638270:CDS | 50.0% | |
| TCTCCAAATGGAGTCACAGC+TGG | + | chr4_3:32798807-32798826 | Msa0638270:CDS | 50.0% | |
| TGGATCTGGAGAAGCTGTGA+AGG | + | chr4_3:32798948-32798967 | Msa0638270:CDS | 50.0% | |
| TGGAGAAGCTGTGAAGGAAG+AGG | + | chr4_3:32798954-32798973 | Msa0638270:CDS | 50.0% | |
| GGAGAAGCTGTGAAGGAAGA+GGG | + | chr4_3:32798955-32798974 | Msa0638270:CDS | 50.0% | |
| TGAAAAAGGGTCGAAGAGGC+TGG | - | chr4_3:32798981-32799000 | None:intergenic | 50.0% | |
| TCGCTGAAAAAGGGTCGAAG+AGG | - | chr4_3:32798985-32799004 | None:intergenic | 50.0% | |
| GACCATGACTCTCTGCTCTT+AGG | - | chr4_3:32799012-32799031 | None:intergenic | 50.0% | |
| AAGAGCAGAGAGTCATGGTC+TGG | + | chr4_3:32799012-32799031 | Msa0638270:CDS | 50.0% | |
| CAGAGAGTCATGGTCTGGTT+TGG | + | chr4_3:32799017-32799036 | Msa0638270:CDS | 50.0% | |
| GGTGGCAGTAGTAACAACGG+AGG | + | chr4_3:32795911-32795930 | Msa0638270:CDS | 55.0% | |
| ! | CGGAGGTGTAGGGATGATGA+TGG | + | chr4_3:32795928-32795947 | Msa0638270:CDS | 55.0% |
| CACCCTTCACAGTGTCTCAG+TGG | + | chr4_3:32795966-32795985 | Msa0638270:CDS | 55.0% | |
| CTGCCACTGAGACACTGTGA+AGG | - | chr4_3:32795972-32795991 | None:intergenic | 55.0% | |
| CTTCACAGTGTCTCAGTGGC+AGG | + | chr4_3:32795970-32795989 | Msa0638270:CDS | 55.0% | |
| TCGAACCTGAGACCTTGAGG+AGG | + | chr4_3:32796367-32796386 | Msa0638270:intron | 55.0% | |
| TACCACTGAGCCAACCCAAG+TGG | + | chr4_3:32796415-32796434 | Msa0638270:intron | 55.0% | |
| ACCACTGAGCCAACCCAAGT+GGG | + | chr4_3:32796416-32796435 | Msa0638270:intron | 55.0% | |
| CGATCGTAACCCACTTGGGT+TGG | - | chr4_3:32796428-32796447 | None:intergenic | 55.0% | |
| TCCTACATCTTCCTGGCTCC+GGG | - | chr4_3:32797024-32797043 | None:intergenic | 55.0% | |
| CTCCTACATCTTCCTGGCTC+CGG | - | chr4_3:32797025-32797044 | None:intergenic | 55.0% | |
| CGCTCACAGTACTTGGAGTC+TGG | - | chr4_3:32797088-32797107 | None:intergenic | 55.0% | |
| CATGTGGCGCTCACAGTACT+TGG | - | chr4_3:32797095-32797114 | None:intergenic | 55.0% | |
| GTGACATCGCTAACTGTCGC+TGG | + | chr4_3:32797181-32797200 | Msa0638270:CDS | 55.0% | |
| ACATCGCTAACTGTCGCTGG+TGG | + | chr4_3:32797184-32797203 | Msa0638270:CDS | 55.0% | |
| GATACTCTGACACGAGGGCT+AGG | + | chr4_3:32797781-32797800 | Msa0638270:intron | 55.0% | |
| AGCTATGGCAGGCTGACAGA+AGG | - | chr4_3:32798026-32798045 | None:intergenic | 55.0% | |
| AGCCTGCCATAGCTGTCACA+TGG | + | chr4_3:32798032-32798051 | Msa0638270:intron | 55.0% | |
| GCCTGCCATAGCTGTCACAT+GGG | + | chr4_3:32798033-32798052 | Msa0638270:intron | 55.0% | |
| CCTGCCATAGCTGTCACATG+GGG | + | chr4_3:32798034-32798053 | Msa0638270:intron | 55.0% | |
| CGGGCGACGAATAACGATGT+TGG | - | chr4_3:32798699-32798718 | None:intergenic | 55.0% | |
| GGCCTAAGAGCAGAGAGTCA+TGG | + | chr4_3:32799007-32799026 | Msa0638270:CDS | 55.0% | |
| ACAAGCTCTCAGTCGCCACA+CGG | + | chr4_3:32799123-32799142 | Msa0638270:CDS | 55.0% | |
| !! | ACCCACTTGGGTTGGCTCAG+TGG | - | chr4_3:32796420-32796439 | None:intergenic | 60.0% |
| ACCCGGAGCCAGGAAGATGT+AGG | + | chr4_3:32797020-32797039 | Msa0638270:CDS | 60.0% | |
| CGGAGCCAGGAAGATGTAGG+AGG | + | chr4_3:32797023-32797042 | Msa0638270:CDS | 60.0% | |
| TGTGAGCGCCACATGCATCG+TGG | + | chr4_3:32797100-32797119 | Msa0638270:CDS | 60.0% | |
| CCCCATGTGACAGCTATGGC+AGG | - | chr4_3:32798037-32798056 | None:intergenic | 60.0% | |
| AAGAAGGTGGACCCGGAGCC+AGG | + | chr4_3:32797010-32797029 | Msa0638270:CDS | 65.0% | |
| GGTTGCGGCCACGATGCATG+TGG | - | chr4_3:32797111-32797130 | None:intergenic | 65.0% | |
| GCTGGTGGCAGCAGCAGAGC+TGG | + | chr4_3:32797199-32797218 | Msa0638270:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 32795584 | 32799236 | 32795584 | ID=Msa0638270;Name=Msa0638270 |
| chr4_3 | mRNA | 32795584 | 32799236 | 32795584 | ID=Msa0638270-mRNA-1;Parent=Msa0638270;Name=Msa0638270-mRNA-1;_AED=0.23;_eAED=0.24;_QI=312|1|0.66|1|1|1|3|0|365 |
| chr4_3 | exon | 32795584 | 32796127 | 32795584 | ID=Msa0638270-mRNA-1:exon:7553;Parent=Msa0638270-mRNA-1 |
| chr4_3 | exon | 32796987 | 32797347 | 32796987 | ID=Msa0638270-mRNA-1:exon:7554;Parent=Msa0638270-mRNA-1 |
| chr4_3 | exon | 32798732 | 32799236 | 32798732 | ID=Msa0638270-mRNA-1:exon:7555;Parent=Msa0638270-mRNA-1 |
| chr4_3 | five_prime_UTR | 32795584 | 32795895 | 32795584 | ID=Msa0638270-mRNA-1:five_prime_utr;Parent=Msa0638270-mRNA-1 |
| chr4_3 | CDS | 32795896 | 32796127 | 32795896 | ID=Msa0638270-mRNA-1:cds;Parent=Msa0638270-mRNA-1 |
| chr4_3 | CDS | 32796987 | 32797347 | 32796987 | ID=Msa0638270-mRNA-1:cds;Parent=Msa0638270-mRNA-1 |
| chr4_3 | CDS | 32798732 | 32799236 | 32798732 | ID=Msa0638270-mRNA-1:cds;Parent=Msa0638270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
