AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0643710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0643710 MtrunA17_Chr4g0030411 89.091 110 7 2 1 105 1 110 3.52e-60 182
Msa0643710 MtrunA17_Chr4g0030421 88.235 68 7 1 101 168 56 122 1.39e-30 107
Msa0643710 MtrunA17_Chr2g0327621 31.780 236 84 7 6 168 9 240 2.02e-18 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 47 sgRNAs with CRISPR-Local

Find 799 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTCCATCATTATTAATA+TGG 0.215056 4_3:-46946617 None:intergenic
TCAGCAAACAAAGTAGAAAA+AGG 0.225080 4_3:-46933280 None:intergenic
AAGATGAGGAAGAAGAGAAT+TGG 0.325488 4_3:+46946646 Msa0643710:CDS
TTAATATGGCTCCATTGATT+TGG 0.330401 4_3:-46946603 None:intergenic
GACTCGTCATGAGCAAGATT+TGG 0.366759 4_3:-46946699 None:intergenic
AGATGAGGAAGAAGAGAATT+GGG 0.375443 4_3:+46946647 Msa0643710:CDS
GAATTGCTTGATCAAGAAAA+TGG 0.385253 4_3:+46933301 Msa0643710:CDS
GACAGTAGGCCACGTATTAG+AGG 0.396649 4_3:+46946543 Msa0643710:CDS
TGGTTGTGCTGCTGCATATC+AGG 0.400086 4_3:-46933088 None:intergenic
CTCAACTCTGGTGGTGGTGG+TGG 0.402700 4_3:+46933139 Msa0643710:CDS
CAGCGGGTGCACTAGCTACT+TGG 0.406529 4_3:+46933183 Msa0643710:intron
CAGTACTGGTGATCTTGATC+AGG 0.424707 4_3:+46933342 Msa0643710:CDS
TTGGGAATCAGTATGTTTGT+AGG 0.430394 4_3:+46946508 Msa0643710:intron
CAGCTCAACTCTGGTGGTGG+TGG 0.445463 4_3:+46933136 Msa0643710:CDS
ATATGGCTCCATTGATTTGG+TGG 0.458606 4_3:-46946600 None:intergenic
TGGAGCCATATTAATAATGA+TGG 0.462252 4_3:+46946612 Msa0643710:CDS
TAATGAATCCACCAAATCAA+TGG 0.463510 4_3:+46946592 Msa0643710:CDS
AGCGGGTGCACTAGCTACTT+GGG 0.466418 4_3:+46933184 Msa0643710:intron
GGACAGTTTATTTGATACAT+TGG 0.482895 4_3:+46946668 Msa0643710:CDS
CACTAGCTACTTGGGGTCGC+CGG 0.492708 4_3:+46933192 Msa0643710:intron
CCACAGCTCAACTCTGGTGG+TGG 0.501156 4_3:+46933133 Msa0643710:CDS
TAATGCTCCTCTGCATCAAT+CGG 0.513230 4_3:-46933216 None:intergenic
TGGAGAGGAATTAGAAGATG+AGG 0.517815 4_3:+46946632 Msa0643710:CDS
GTGCGGCGAGTTTACAGTAC+TGG 0.524680 4_3:+46933328 Msa0643710:CDS
TCGGTCCCACAGCTCAACTC+TGG 0.546806 4_3:+46933127 Msa0643710:CDS
CTCCTCTGCATCAATCGGTC+CGG 0.559465 4_3:-46933211 None:intergenic
CGCCGGACCGATTGATGCAG+AGG 0.577048 4_3:+46933209 Msa0643710:CDS
ACAGTAGGCCACGTATTAGA+GGG 0.598648 4_3:+46946544 Msa0643710:CDS
ATTATAATAGCTGTAGCAGC+GGG 0.602727 4_3:+46933167 Msa0643710:CDS
GTCCCACAGCTCAACTCTGG+TGG 0.604461 4_3:+46933130 Msa0643710:CDS
GTATGTTTGTAGGAAGACAT+TGG 0.609319 4_3:+46946518 Msa0643710:intron
ATGCAGCAGCACAACCACCT+TGG 0.612920 4_3:+46933094 Msa0643710:CDS
CACCACCAGAGTTGAGCTGT+GGG 0.613404 4_3:-46933132 None:intergenic
GGAAGACATTGGCAGACAGT+AGG 0.616987 4_3:+46946529 Msa0643710:CDS
CCACCACCAGAGTTGAGCTG+TGG 0.618777 4_3:-46933133 None:intergenic
TCATGAGCAAGATTTGGAGT+AGG 0.623530 4_3:-46946693 None:intergenic
GCGGGTGCACTAGCTACTTG+GGG 0.623679 4_3:+46933185 Msa0643710:intron
CCATATTAATAATGATGGAG+AGG 0.627865 4_3:+46946617 Msa0643710:CDS
AATTATAATAGCTGTAGCAG+CGG 0.651255 4_3:+46933166 Msa0643710:CDS
CTGCTGCATATCAGGCGTGG+TGG 0.663548 4_3:-46933080 None:intergenic
ATCAAGAAAATGGTGCGGTG+CGG 0.665222 4_3:+46933311 Msa0643710:CDS
GTGCTGCTGCATATCAGGCG+TGG 0.690874 4_3:-46933083 None:intergenic
CCACCTTGGTGAATACGAGT+CGG 0.699146 4_3:+46933108 Msa0643710:CDS
GCAAATCTCCCTCTAATACG+TGG 0.703686 4_3:-46946552 None:intergenic
GGACCGACTCGTATTCACCA+AGG 0.731845 4_3:-46933111 None:intergenic
CCGACTCGTATTCACCAAGG+TGG 0.737009 4_3:-46933108 None:intergenic
GCTTGATCAAGAAAATGGTG+CGG 0.768844 4_3:+46933306 Msa0643710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAAATAAATAT+CGG - chr4_3:46944366-46944385 None:intergenic 0.0%
!!! AAATTATTGTTCTTTTTTTT+TGG - chr4_3:46933514-46933533 None:intergenic 10.0%
!!! ATTAAGAAAAAAATAGATTT+TGG - chr4_3:46934071-46934090 None:intergenic 10.0%
!!! CATATTATTTATATGATTTT+TGG - chr4_3:46935635-46935654 None:intergenic 10.0%
!!! AAAAATAATACTTTTTGTTT+AGG - chr4_3:46936152-46936171 None:intergenic 10.0%
!!! AATCTTCTATATTTTTTTTT+TGG + chr4_3:46936178-46936197 Msa0643710:intron 10.0%
!!! AACTTTATTTTTTTGTTTTA+TGG - chr4_3:46938255-46938274 None:intergenic 10.0%
!!! ATTTTAAATATTTGAGTATA+TGG - chr4_3:46939644-46939663 Msa0643720:intron 10.0%
!! TCACAAATTATATAAAATAT+GGG - chr4_3:46942608-46942627 None:intergenic 10.0%
!! TTCACAAATTATATAAAATA+TGG - chr4_3:46942609-46942628 None:intergenic 10.0%
!!! TAAAAGTTCATATTTTTTTA+TGG - chr4_3:46943705-46943724 None:intergenic 10.0%
!!! ATTAGATATTTTTTACAAAA+GGG + chr4_3:46943997-46944016 Msa0643710:intron 10.0%
!!! TTTAAGTTTTAAAACAATAT+TGG - chr4_3:46944396-46944415 None:intergenic 10.0%
!!! TTTAAAACTTAAATAGTATA+TGG + chr4_3:46944403-46944422 Msa0643710:intron 10.0%
!! GTCATTATTATATAAAAAAG+TGG - chr4_3:46933404-46933423 None:intergenic 15.0%
!! CAAAGTAGTATAAAAATTAT+TGG - chr4_3:46933491-46933510 None:intergenic 15.0%
!! TCATATTTATTTAAATAGGT+CGG - chr4_3:46933731-46933750 None:intergenic 15.0%
!! TATAAACTAGAATTGAAATA+TGG + chr4_3:46933873-46933892 Msa0643710:intron 15.0%
!!! GACTTCAATTTTTTTTTTTT+AGG + chr4_3:46934981-46935000 Msa0643710:intron 15.0%
!!! TATGAGTTTATTTTTTTCAA+TGG - chr4_3:46935090-46935109 None:intergenic 15.0%
!!! AAACTCATATTTTTTTTTAG+AGG + chr4_3:46935101-46935120 Msa0643710:intron 15.0%
!!! AAAATCTATATCACTTTTTA+TGG + chr4_3:46935250-46935269 Msa0643710:intron 15.0%
!!! CAATAATTTTAGTTTTTTTG+AGG - chr4_3:46935976-46935995 None:intergenic 15.0%
!! ACTAAAATTATTGAATAAGT+AGG + chr4_3:46935983-46936002 Msa0643710:intron 15.0%
!!! TATCCCTAATTATATATTTT+TGG + chr4_3:46936024-46936043 Msa0643710:intron 15.0%
!! TAGCCAAAAATATATAATTA+GGG - chr4_3:46936030-46936049 None:intergenic 15.0%
!!! GTTATTGTGATTTTTTTTAT+TGG + chr4_3:46936284-46936303 Msa0643710:intron 15.0%
!!! TTATTGGTTAAATTTACTAT+TGG + chr4_3:46936300-46936319 Msa0643710:intron 15.0%
!! AATTAAACTTATAACAACTT+TGG - chr4_3:46937579-46937598 None:intergenic 15.0%
!!! GCTTAATTATATTTACTTTT+TGG - chr4_3:46938170-46938189 None:intergenic 15.0%
!!! TTTAATTTGATTTGATGATT+TGG + chr4_3:46938897-46938916 Msa0643710:intron 15.0%
!!! TTACTATTTTCATAATTACA+AGG - chr4_3:46939613-46939632 Msa0643720:intron 15.0%
!!! TTTAAAATGTATACAGTTTA+TGG - chr4_3:46940188-46940207 Msa0643720:intron 15.0%
!! GTAATTAATATTAATAGTAC+AGG - chr4_3:46940242-46940261 Msa0643720:intron 15.0%
!!! TAGTTTTCAAATTTAAATGA+TGG + chr4_3:46941080-46941099 Msa0643710:intron 15.0%
!! AAAATATTACATTGTCAAAA+AGG - chr4_3:46941424-46941443 Msa0643720:intron 15.0%
!!! TGTTAAAGATCAATTTTATT+AGG + chr4_3:46941792-46941811 Msa0643710:intron 15.0%
!! TTGATATATAAAAAAACCAT+AGG + chr4_3:46942141-46942160 Msa0643710:intron 15.0%
!!! AAGTTTTATCATTTTATGTT+AGG - chr4_3:46942375-46942394 Msa0643720:intron 15.0%
!!! ATTTTGTTCAAATATGTTAT+TGG - chr4_3:46942572-46942591 Msa0643720:intron 15.0%
!! TTAGTACAAAGATTAAAAAA+TGG + chr4_3:46943118-46943137 Msa0643710:intron 15.0%
!! ATTTCACTTAATCATATTAA+TGG - chr4_3:46943145-46943164 None:intergenic 15.0%
!! ATTAATATGATTAAGTGAAA+TGG + chr4_3:46943144-46943163 Msa0643710:intron 15.0%
!!! TTTTATTTTACACAATCTTT+AGG - chr4_3:46943423-46943442 None:intergenic 15.0%
!! AACTTCATTATAACTTTAAA+TGG + chr4_3:46943527-46943546 Msa0643710:intron 15.0%
!! ACTTCATTATAACTTTAAAT+GGG + chr4_3:46943528-46943547 Msa0643710:intron 15.0%
!!! ATTAGGTATTACTTTTAAAT+GGG - chr4_3:46943602-46943621 None:intergenic 15.0%
!! ATAAAACACAAATATGAAAA+CGG + chr4_3:46943783-46943802 Msa0643710:intron 15.0%
!! ACATACATTTAAAAGAATAA+AGG + chr4_3:46943808-46943827 Msa0643710:intron 15.0%
!!! CATTAGATATTTTTTACAAA+AGG + chr4_3:46943996-46944015 Msa0643710:intron 15.0%
!! AAAATGTATGTATTAAAATG+AGG - chr4_3:46944320-46944339 None:intergenic 15.0%
!! TTTCTTTCATCTAAAAAAAA+TGG - chr4_3:46944667-46944686 None:intergenic 15.0%
!!! AGAACTAATTAATTTGAATA+TGG - chr4_3:46945344-46945363 None:intergenic 15.0%
!! TAAAAAAACATAAGAAGAAA+AGG + chr4_3:46945433-46945452 Msa0643710:intron 15.0%
!!! ATATTTTTTATTTTGTTGTG+TGG + chr4_3:46945608-46945627 Msa0643710:intron 15.0%
!!! TATTTTTTATTTTGTTGTGT+GGG + chr4_3:46945609-46945628 Msa0643710:intron 15.0%
!! TTAAGAATATTATAACAACA+TGG + chr4_3:46945817-46945836 Msa0643710:intron 15.0%
!!! GTTTATTTTTGAAAAAACTA+GGG - chr4_3:46946168-46946187 None:intergenic 15.0%
!!! AGTTTATTTTTGAAAAAACT+AGG - chr4_3:46946169-46946188 None:intergenic 15.0%
!!! TCAAATTGTAACTATAATTT+TGG + chr4_3:46946306-46946325 Msa0643710:intron 15.0%
!!! TATAAAAAAGTGGATTTTAG+AGG - chr4_3:46933394-46933413 None:intergenic 20.0%
!! GTAGTATAAAAATTATTGGA+CGG - chr4_3:46933487-46933506 None:intergenic 20.0%
!! TTTAAGAAAAAAGTTTGGTT+TGG - chr4_3:46933630-46933649 None:intergenic 20.0%
!! CTCTATTTAAGAAAAAAGTT+TGG - chr4_3:46933635-46933654 None:intergenic 20.0%
!!! TGTTTGTTTTGGATTTTTTT+TGG + chr4_3:46933912-46933931 Msa0643710:intron 20.0%
!!! TGAAATAGATTTTCATTTTG+AGG - chr4_3:46934038-46934057 None:intergenic 20.0%
!!! TCTATTTTTTTCTTAATGCA+AGG + chr4_3:46934074-46934093 Msa0643710:intron 20.0%
!!! GATGAAATAAACTTTTAAAC+AGG + chr4_3:46934369-46934388 Msa0643710:intron 20.0%
!!! TTTTCATAAGCTTACTTTTT+AGG - chr4_3:46934435-46934454 None:intergenic 20.0%
!! ATGAAATAAGATGTAAAATG+AGG - chr4_3:46935204-46935223 None:intergenic 20.0%
!! GTAGCCAAAAATATATAATT+AGG - chr4_3:46936031-46936050 None:intergenic 20.0%
!! TTCCACATAAAATTAAACTT+GGG - chr4_3:46936054-46936073 None:intergenic 20.0%
!! ATTCCACATAAAATTAAACT+TGG - chr4_3:46936055-46936074 None:intergenic 20.0%
!!! AAAGCTAGCAATATTTTATA+AGG - chr4_3:46936355-46936374 None:intergenic 20.0%
!! TTACATTATGTTCTTATCAA+CGG - chr4_3:46936379-46936398 None:intergenic 20.0%
!! ATACAATACAATGTTTATAC+AGG - chr4_3:46936845-46936864 None:intergenic 20.0%
!! AAATATAAGTGTGTGATATT+GGG - chr4_3:46937090-46937109 None:intergenic 20.0%
!! ACAACTATAAGTATATATAG+TGG + chr4_3:46937512-46937531 Msa0643710:intron 20.0%
!! GTATATATAGTGGTAATATA+TGG + chr4_3:46937522-46937541 Msa0643710:intron 20.0%
!! TAAAAAAAAAAATCCTCAGT+TGG + chr4_3:46938304-46938323 Msa0643710:intron 20.0%
!!! AATATTGATTCATGATGAAA+AGG - chr4_3:46938521-46938540 None:intergenic 20.0%
!! ATATTTCTTAGTAGCATAAT+TGG + chr4_3:46938864-46938883 Msa0643710:intron 20.0%
!! CATCAAATCAAATTAAAAGT+GGG - chr4_3:46938894-46938913 Msa0643720:three_prime_UTR 20.0%
!! TCATCAAATCAAATTAAAAG+TGG - chr4_3:46938895-46938914 Msa0643720:three_prime_UTR 20.0%
!! AATGTTAATAACTGAATATG+AGG - chr4_3:46939273-46939292 Msa0643720:intron 20.0%
!!! TCAGTTATTAACATTTCTTT+TGG + chr4_3:46939278-46939297 Msa0643710:intron 20.0%
!!! ATTAACATTTCTTTTGGAAT+AGG + chr4_3:46939284-46939303 Msa0643710:intron 20.0%
!! AATAAATGCTTCATACATTT+GGG - chr4_3:46939462-46939481 Msa0643720:intron 20.0%
!! ACAAATAGTGTATAACTTAA+AGG - chr4_3:46939571-46939590 Msa0643720:intron 20.0%
!! ATATACAATTGTGCAAATTT+AGG + chr4_3:46939796-46939815 Msa0643710:intron 20.0%
!! TATATTTACCCTACAAAAAT+TGG + chr4_3:46940287-46940306 Msa0643710:intron 20.0%
!! AAATAATAACCATGATAACT+TGG - chr4_3:46940407-46940426 Msa0643720:three_prime_UTR 20.0%
!!! TTATCATGGTTATTATTTTC+TGG + chr4_3:46940409-46940428 Msa0643710:intron 20.0%
!!! TTATTTTCTGGTAAATTGAT+TGG + chr4_3:46940421-46940440 Msa0643710:intron 20.0%
!!! TAATTTGTTGTGAATATTGT+AGG + chr4_3:46941015-46941034 Msa0643710:intron 20.0%
!!! ATTTGACTTTGAAATATAGT+AGG + chr4_3:46941046-46941065 Msa0643710:intron 20.0%
!! ATGGTTATACTTATATACAT+TGG + chr4_3:46941573-46941592 Msa0643710:intron 20.0%
!! TTATACTTATATACATTGGA+AGG + chr4_3:46941577-46941596 Msa0643710:intron 20.0%
!! ATTAGAAAAAACCAAACTTA+TGG + chr4_3:46941690-46941709 Msa0643710:intron 20.0%
!! AATTGATCTTTAACAAAACA+TGG - chr4_3:46941787-46941806 Msa0643720:intron 20.0%
!! AGTTTGATTAATTATATACC+TGG + chr4_3:46942185-46942204 Msa0643710:intron 20.0%
!!! ATCATAAGTTTAAGTTGATA+TGG - chr4_3:46942769-46942788 Msa0643730:intron 20.0%
!! AAATTACAATGAAAAAGACA+TGG + chr4_3:46943190-46943209 Msa0643710:intron 20.0%
!! AAAGAACCATAAACAAAATA+AGG + chr4_3:46943260-46943279 Msa0643710:intron 20.0%
!!! ATTAGGATTTTCTTTGAAAT+GGG - chr4_3:46943486-46943505 None:intergenic 20.0%
!! TCAAAATCATGATTTACATT+AGG - chr4_3:46943503-46943522 None:intergenic 20.0%
!! TAACCAATAAACAAAACAAA+TGG + chr4_3:46943569-46943588 Msa0643710:intron 20.0%
!!! CATTAGGTATTACTTTTAAA+TGG - chr4_3:46943603-46943622 None:intergenic 20.0%
!! ATTTAAAAGAATAAAGGAGA+AGG + chr4_3:46943814-46943833 Msa0643710:intron 20.0%
!! TCTTATATTAAGAGAGATTA+AGG + chr4_3:46944260-46944279 Msa0643710:intron 20.0%
!!! TAGTATATGTGATTTGTTTT+GGG - chr4_3:46944634-46944653 None:intergenic 20.0%
!!! ATAGTATATGTGATTTGTTT+TGG - chr4_3:46944635-46944654 None:intergenic 20.0%
!!! AAAAAGATTTTTTAGTGTGT+GGG - chr4_3:46944879-46944898 None:intergenic 20.0%
!!! AAAAAAGATTTTTTAGTGTG+TGG - chr4_3:46944880-46944899 None:intergenic 20.0%
!!! AGTTCATTTTCCTATTTTTA+CGG - chr4_3:46945153-46945172 None:intergenic 20.0%
!!! ATATTTTTGTGTTATAAGAG+AGG + chr4_3:46945556-46945575 Msa0643710:intron 20.0%
!!! TATTTTTGTGTTATAAGAGA+GGG + chr4_3:46945557-46945576 Msa0643710:intron 20.0%
!! AAAAAATATAAGTGTAACAG+TGG - chr4_3:46945597-46945616 None:intergenic 20.0%
!!! CAAAAACAAAATTTGTTTCA+TGG - chr4_3:46945636-46945655 None:intergenic 20.0%
!!! AATATGGTCATTCATTTTAA+AGG - chr4_3:46945703-46945722 None:intergenic 20.0%
!! TTAAAATGAATGACCATATT+AGG + chr4_3:46945703-46945722 Msa0643710:intron 20.0%
!! TAAAATGAATGACCATATTA+GGG + chr4_3:46945704-46945723 Msa0643710:intron 20.0%
!!! CAATTTTTTCCTGTATTTTT+TGG - chr4_3:46945734-46945753 None:intergenic 20.0%
!! ATATAAAACCCTCATTATTT+GGG - chr4_3:46945905-46945924 None:intergenic 20.0%
!! AATATAAAACCCTCATTATT+TGG - chr4_3:46945906-46945925 None:intergenic 20.0%
!!! TTTTCAAAAATAAACTGAAG+TGG + chr4_3:46946173-46946192 Msa0643710:intron 20.0%
!! TGAAGAATGAAAATTAGAAT+TGG + chr4_3:46946222-46946241 Msa0643710:intron 20.0%
!!! TATTCTTTTGATTTTTTGCA+TGG + chr4_3:46946255-46946274 Msa0643710:intron 20.0%
!!! ATCTTAGTTTTGTTTTCTTT+TGG + chr4_3:46946489-46946508 Msa0643710:intron 20.0%
!!! TCTTAGTTTTGTTTTCTTTT+GGG + chr4_3:46946490-46946509 Msa0643710:intron 20.0%
! TTCTTAAATAGAGAAGACTT+TGG + chr4_3:46933642-46933661 Msa0643710:intron 25.0%
! TGAAATATGGTACAACATAT+AGG + chr4_3:46933886-46933905 Msa0643710:intron 25.0%
! GAAATATGGTACAACATATA+GGG + chr4_3:46933887-46933906 Msa0643710:intron 25.0%
!!! TTTTTAGAGAAGTTGACTAT+GGG - chr4_3:46934253-46934272 None:intergenic 25.0%
!!! GAGTCATTTTTCATTTATGT+AGG + chr4_3:46934602-46934621 Msa0643710:intron 25.0%
! AAAAAAAGCGATGATGAAAT+GGG - chr4_3:46934716-46934735 None:intergenic 25.0%
! AAAAAAAAGCGATGATGAAA+TGG - chr4_3:46934717-46934736 None:intergenic 25.0%
! CTAATTCTTGTCTACAAAAT+TGG - chr4_3:46934756-46934775 None:intergenic 25.0%
!! TTTTGTAGACAAGAATTAGA+TGG + chr4_3:46934757-46934776 Msa0643710:intron 25.0%
! TTCTTTCTTCTTAAACAACT+AGG + chr4_3:46934784-46934803 Msa0643710:intron 25.0%
!!! CATATTTTTTTTTAGAGGAG+TGG + chr4_3:46935106-46935125 Msa0643710:intron 25.0%
! AGATACTTATAAGATCAGTT+TGG - chr4_3:46935176-46935195 None:intergenic 25.0%
! ACTCCATTAAAGAAAATGTT+TGG - chr4_3:46935458-46935477 None:intergenic 25.0%
!! CATTTTCTTTAATGGAGTAA+TGG + chr4_3:46935460-46935479 Msa0643710:intron 25.0%
!!! ATGTCTTTTATTTTCTTCCA+GGG - chr4_3:46935489-46935508 None:intergenic 25.0%
!!! AATGTCTTTTATTTTCTTCC+AGG - chr4_3:46935490-46935509 None:intergenic 25.0%
! ATTGTCGCAAAAGATAATAA+AGG - chr4_3:46935834-46935853 None:intergenic 25.0%
! TCCACATAAAATTAAACTTG+GGG - chr4_3:46936053-46936072 None:intergenic 25.0%
!! ATGTGGAATAAATTTTTGTC+TGG + chr4_3:46936066-46936085 Msa0643710:intron 25.0%
!!! AATAAATTTTTGTCTGGCTT+AGG + chr4_3:46936072-46936091 Msa0643710:intron 25.0%
!!! ACAATATGTTGTTGTTGTTT+TGG + chr4_3:46936202-46936221 Msa0643710:intron 25.0%
! ACAGGAAAAACTTGAATATA+TGG + chr4_3:46936741-46936760 Msa0643710:intron 25.0%
! ACAATTTATGATAGAGTTGT+TGG + chr4_3:46937006-46937025 Msa0643710:intron 25.0%
! AGTTGTTGGTGTAAAAAATA+GGG + chr4_3:46937020-46937039 Msa0643710:intron 25.0%
! TGAGAATAAGAACATTGTAA+TGG + chr4_3:46937044-46937063 Msa0643710:intron 25.0%
! GAGAATAAGAACATTGTAAT+GGG + chr4_3:46937045-46937064 Msa0643710:intron 25.0%
! CAAATATAAGTGTGTGATAT+TGG - chr4_3:46937091-46937110 None:intergenic 25.0%
!!! CTAATTTTTTTTACTGCACT+TGG - chr4_3:46937137-46937156 None:intergenic 25.0%
! TTCTTTAATACAGTGTTAAC+AGG + chr4_3:46937217-46937236 Msa0643710:intron 25.0%
! AAAAAAGCTTTCATACAAAG+AGG + chr4_3:46937875-46937894 Msa0643710:intron 25.0%
! ATAATGTTCTACAACAGATT+TGG + chr4_3:46937973-46937992 Msa0643710:intron 25.0%
! TATGAAATCAATTACCAGTA+AGG + chr4_3:46938080-46938099 Msa0643710:intron 25.0%
!! ACAATCACTTCAACATTTTT+AGG - chr4_3:46938114-46938133 None:intergenic 25.0%
! TCTTCTTATATTCTCATTAC+AGG - chr4_3:46938369-46938388 None:intergenic 25.0%
! CAAAAGATGTATTTAGTCAT+GGG - chr4_3:46938591-46938610 Msa0643720:three_prime_UTR 25.0%
! AAGCAGTTTACTAAGAAATT+TGG + chr4_3:46938932-46938951 Msa0643710:intron 25.0%
! AGCAGTTTACTAAGAAATTT+GGG + chr4_3:46938933-46938952 Msa0643710:intron 25.0%
! TGATTTCTGATCTATCAATA+TGG + chr4_3:46938985-46939004 Msa0643710:intron 25.0%
!! ATATGAATGTTTGAAGTGTA+GGG - chr4_3:46939193-46939212 Msa0643720:intron 25.0%
!! TATGATCTGTAATTTTCCAA+AGG + chr4_3:46939210-46939229 Msa0643710:intron 25.0%
!!! TTCTTTTGGAATAGGTATTT+CGG + chr4_3:46939292-46939311 Msa0643710:intron 25.0%
! AAAAACATGAGATTGAAACA+TGG - chr4_3:46939413-46939432 Msa0643720:intron 25.0%
!! ATGTTTCAATCTCATGTTTT+TGG + chr4_3:46939412-46939431 Msa0643710:intron 25.0%
! CAATAAATGCTTCATACATT+TGG - chr4_3:46939463-46939482 Msa0643720:intron 25.0%
!! AATGTATGAAGCATTTATTG+AGG + chr4_3:46939463-46939482 Msa0643710:intron 25.0%
! CATTTGACATTATGTATTGA+TGG - chr4_3:46939672-46939691 Msa0643720:intron 25.0%
! CACAAACATATATGGAATTT+AGG + chr4_3:46940071-46940090 Msa0643710:intron 25.0%
! TATACAGTTTATGGAGATAT+AGG - chr4_3:46940179-46940198 Msa0643720:intron 25.0%
!! GAAGATAACCAATTTTTGTA+GGG - chr4_3:46940298-46940317 Msa0643720:three_prime_UTR 25.0%
!! TGAAGATAACCAATTTTTGT+AGG - chr4_3:46940299-46940318 Msa0643720:three_prime_UTR 25.0%
! ATGAGTAGGTTTAGTATTAA+GGG + chr4_3:46941151-46941170 Msa0643710:intron 25.0%
! TTTAGTATTAAGGGTAGAAT+AGG + chr4_3:46941160-46941179 Msa0643710:intron 25.0%
! GAATAGGTAATATTTGAAAG+TGG + chr4_3:46941176-46941195 Msa0643710:intron 25.0%
!!! GTAGGTTTTATATTAAGTGA+GGG + chr4_3:46941269-46941288 Msa0643710:intron 25.0%
! ACAATATTGCATTGTCAAAA+AGG - chr4_3:46941331-46941350 Msa0643720:CDS 25.0%
! TCAAAATCAAAGATATGTCA+TGG + chr4_3:46941554-46941573 Msa0643710:intron 25.0%
! AATATGTCAAACAATTCCAT+TGG - chr4_3:46941624-46941643 Msa0643720:intron 25.0%
!!! AATGTTGTTTTCCATAAGTT+TGG - chr4_3:46941704-46941723 Msa0643720:intron 25.0%
! TTATGTTGTTATGTTAACCA+AGG + chr4_3:46941886-46941905 Msa0643710:intron 25.0%
! TATAACTATGATAACATCCT+TGG - chr4_3:46941906-46941925 Msa0643720:intron 25.0%
! TAATTATATACCTGGAAATG+TGG + chr4_3:46942193-46942212 Msa0643710:intron 25.0%
! AATTATATACCTGGAAATGT+GGG + chr4_3:46942194-46942213 Msa0643710:intron 25.0%
!!! TCTGTCATTTGTTTTAAAGA+GGG - chr4_3:46942253-46942272 Msa0643720:CDS 25.0%
!!! ATCTGTCATTTGTTTTAAAG+AGG - chr4_3:46942254-46942273 Msa0643720:CDS 25.0%
!!! GACTGATTTTTAAAGTTAAG+TGG - chr4_3:46942297-46942316 Msa0643720:intron 25.0%
!! TTTATCATTTTATGTTAGGC+TGG - chr4_3:46942371-46942390 Msa0643720:intron 25.0%
! TATAAATCCTATACATCTGT+TGG - chr4_3:46942417-46942436 Msa0643720:intron 25.0%
! ATGTTAATCAGCATAAATGT+TGG - chr4_3:46942724-46942743 Msa0643730:CDS 25.0%
!!! AAGTTTAAGTTGATATGGAT+TGG - chr4_3:46942764-46942783 Msa0643730:intron 25.0%
! TATTGTTGACAAAAAGGTAA+GGG - chr4_3:46942902-46942921 Msa0643730:intron 25.0%
! TTATTGTTGACAAAAAGGTA+AGG - chr4_3:46942903-46942922 Msa0643730:intron 25.0%
! ATTGGTTATTGTTGACAAAA+AGG - chr4_3:46942908-46942927 Msa0643730:CDS 25.0%
! TTTCCAGAAATCTTTCTTAT+CGG + chr4_3:46942987-46943006 Msa0643710:intron 25.0%
! ATGTCACCAATAAATTCAAA+TGG + chr4_3:46943012-46943031 Msa0643710:intron 25.0%
!!! CATTAGGATTTTCTTTGAAA+TGG - chr4_3:46943487-46943506 None:intergenic 25.0%
! CAATAAACAAAACAAATGGA+GGG + chr4_3:46943573-46943592 Msa0643710:intron 25.0%
! CCAAAATCATGATTTACATT+AGG - chr4_3:46943619-46943638 None:intergenic 25.0%
!! CCTAATGTAAATCATGATTT+TGG + chr4_3:46943500-46943519 Msa0643710:intron 25.0%
!! AGTAACCAAAAACACAATTT+TGG + chr4_3:46943649-46943668 Msa0643710:intron 25.0%
! CACATTTAACATAGAACTTT+AGG + chr4_3:46943741-46943760 Msa0643710:intron 25.0%
! GAGAAAACAAAGAAACTAAT+TGG + chr4_3:46944092-46944111 Msa0643710:intron 25.0%
! AACTTAAATAGTATATGGTC+CGG + chr4_3:46944408-46944427 Msa0643710:intron 25.0%
! CTACTTTAAACAATTTAAGC+TGG + chr4_3:46944455-46944474 Msa0643710:intron 25.0%
!!! CAACTCAAGTTTTTTATAAG+TGG - chr4_3:46944595-46944614 None:intergenic 25.0%
! CACTTATAAAAAACTTGAGT+TGG + chr4_3:46944593-46944612 Msa0643710:intron 25.0%
!!! ATAAAAAACTTGAGTTGGAA+AGG + chr4_3:46944598-46944617 Msa0643710:intron 25.0%
! TCTAAAAAAAATGGCATACT+TGG - chr4_3:46944658-46944677 None:intergenic 25.0%
! CATGAAGAAAAATTGTTTCA+TGG + chr4_3:46944852-46944871 Msa0643710:intron 25.0%
!! AAAATGATGGTTCTATACTT+GGG - chr4_3:46944956-46944975 None:intergenic 25.0%
!! TAAAATGATGGTTCTATACT+TGG - chr4_3:46944957-46944976 None:intergenic 25.0%
! TCTTTGATCTAGAAGTTTAT+GGG - chr4_3:46945069-46945088 None:intergenic 25.0%
! TTCTTTGATCTAGAAGTTTA+TGG - chr4_3:46945070-46945089 None:intergenic 25.0%
!!! GTAGTTTATTTGTTGCTTTT+TGG - chr4_3:46945206-46945225 None:intergenic 25.0%
!! TTCTTTTTCCTGTTATATTG+TGG - chr4_3:46945231-46945250 None:intergenic 25.0%
! AGAAAAGGAAAAAACAATGA+AGG + chr4_3:46945448-46945467 Msa0643710:intron 25.0%
!!! TGCTATTGAAAGTCATTTTA+AGG + chr4_3:46945663-46945682 Msa0643710:intron 25.0%
!!! GCTATTGAAAGTCATTTTAA+GGG + chr4_3:46945664-46945683 Msa0643710:intron 25.0%
!!! CTATTGAAAGTCATTTTAAG+GGG + chr4_3:46945665-46945684 Msa0643710:intron 25.0%
! AAAATGAATGACCATATTAG+GGG + chr4_3:46945705-46945724 Msa0643710:intron 25.0%
! TATAAAACCCTCATTATTTG+GGG - chr4_3:46945904-46945923 None:intergenic 25.0%
!! ACAAAATTTTCTCCATTCAT+TGG - chr4_3:46946058-46946077 None:intergenic 25.0%
!! CATCTAAGATTGAAAGTAAA+TGG + chr4_3:46946120-46946139 Msa0643710:intron 25.0%
! AAATGGAAACAGTAAAAAGT+TGG + chr4_3:46946137-46946156 Msa0643710:intron 25.0%
!! ACAATTTGATATTTTCTGTG+TGG - chr4_3:46946295-46946314 None:intergenic 25.0%
!!! GATTTGTTACTGTACATTAT+TGG - chr4_3:46946440-46946459 None:intergenic 25.0%
AATTATAATAGCTGTAGCAG+CGG + chr4_3:46933166-46933185 Msa0643710:CDS 30.0%
CAGCAAACAAAGTAGAAAAA+GGG - chr4_3:46933282-46933301 None:intergenic 30.0%
TCAGCAAACAAAGTAGAAAA+AGG - chr4_3:46933283-46933302 None:intergenic 30.0%
GAATTGCTTGATCAAGAAAA+TGG + chr4_3:46933301-46933320 Msa0643710:CDS 30.0%
GAGGAAGATGATATTGTAAA+CGG - chr4_3:46933375-46933394 None:intergenic 30.0%
ATGTTGAATCTAATGCAAGT+AGG + chr4_3:46933545-46933564 Msa0643710:intron 30.0%
TGTTGAATCTAATGCAAGTA+GGG + chr4_3:46933546-46933565 Msa0643710:intron 30.0%
! GATCATTCAAAAAGCCTTTT+AGG + chr4_3:46933705-46933724 Msa0643710:intron 30.0%
!! GTTTTTAGAGAAGTTGACTA+TGG - chr4_3:46934254-46934273 None:intergenic 30.0%
! AAACTTTTAAACAGGTTAGC+AGG + chr4_3:46934377-46934396 Msa0643710:intron 30.0%
TAATATGGAGGTTAAAATCG+TGG - chr4_3:46934643-46934662 None:intergenic 30.0%
ACCTCCATATTAACAAAATC+CGG + chr4_3:46934651-46934670 Msa0643710:intron 30.0%
!!! ACACAATGATTTTAACTCTC+CGG - chr4_3:46934673-46934692 None:intergenic 30.0%
AAAAAAGCGATGATGAAATG+GGG - chr4_3:46934715-46934734 None:intergenic 30.0%
TTCTTCTTAAACAACTAGGA+AGG + chr4_3:46934788-46934807 Msa0643710:intron 30.0%
!!! ATTTTTTTTTAGAGGAGTGG+AGG + chr4_3:46935109-46935128 Msa0643710:intron 30.0%
AGGAGTTAACAAAAGATGAA+AGG + chr4_3:46935129-46935148 Msa0643710:intron 30.0%
GGAGTTAACAAAAGATGAAA+GGG + chr4_3:46935130-46935149 Msa0643710:intron 30.0%
CTTATAAGATCAGTTTGGAA+CGG - chr4_3:46935171-46935190 None:intergenic 30.0%
TGACAATGTGTTTATAAGTG+GGG - chr4_3:46935395-46935414 None:intergenic 30.0%
GTGACAATGTGTTTATAAGT+GGG - chr4_3:46935396-46935415 None:intergenic 30.0%
TGTGACAATGTGTTTATAAG+TGG - chr4_3:46935397-46935416 None:intergenic 30.0%
CCATTAAAGAAAATGTTTGG+TGG - chr4_3:46935455-46935474 None:intergenic 30.0%
! CCACCAAACATTTTCTTTAA+TGG + chr4_3:46935452-46935471 Msa0643710:intron 30.0%
CACTCAATGATATAAGATGT+AGG - chr4_3:46935572-46935591 None:intergenic 30.0%
ACATCTTATATCATTGAGTG+TGG + chr4_3:46935572-46935591 Msa0643710:intron 30.0%
AAAGAAAGAGAATAAGAACC+AGG + chr4_3:46935913-46935932 Msa0643710:intron 30.0%
AAGAAAGAGAATAAGAACCA+GGG + chr4_3:46935914-46935933 Msa0643710:intron 30.0%
!! ACCCCAAGTTTAATTTTATG+TGG + chr4_3:46936049-46936068 Msa0643710:intron 30.0%
!! GTGTTAATCCTTTAGTTTGT+GGG - chr4_3:46936130-46936149 None:intergenic 30.0%
! GCTAGCAATATTTTATAAGG+TGG - chr4_3:46936352-46936371 None:intergenic 30.0%
CCATTAACTCTCTTTACATA+CGG - chr4_3:46936504-46936523 None:intergenic 30.0%
ATCAGATAGTCCTTTGTTAA+CGG + chr4_3:46936545-46936564 Msa0643710:intron 30.0%
GAGTTGTTGGTGTAAAAAAT+AGG + chr4_3:46937019-46937038 Msa0643710:intron 30.0%
GTTGTTGGTGTAAAAAATAG+GGG + chr4_3:46937021-46937040 Msa0643710:intron 30.0%
GCTATTTAAACACAAAAACC+GGG - chr4_3:46937115-46937134 None:intergenic 30.0%
GGCTATTTAAACACAAAAAC+CGG - chr4_3:46937116-46937135 None:intergenic 30.0%
!! AATTAGCTACTTTGTTGTTG+TGG + chr4_3:46937151-46937170 Msa0643710:intron 30.0%
CTTCTTTCAAAAAATGTTGC+AGG + chr4_3:46937188-46937207 Msa0643710:intron 30.0%
GTTAAGATTCTCCACTTATT+TGG + chr4_3:46937423-46937442 Msa0643710:intron 30.0%
AAGTTACACATGCAAAATGA+CGG - chr4_3:46937458-46937477 None:intergenic 30.0%
TTATTAGTGTCTCATTAGAC+TGG + chr4_3:46937652-46937671 Msa0643710:intron 30.0%
TATTAGTGTCTCATTAGACT+GGG + chr4_3:46937653-46937672 Msa0643710:intron 30.0%
AAACTTGAAGAATAAGACAC+AGG - chr4_3:46937709-46937728 None:intergenic 30.0%
!! GTGTCTTATTCTTCAAGTTT+TGG + chr4_3:46937709-46937728 Msa0643710:intron 30.0%
!! TTGAGTTGAATAAAGCTACT+TGG - chr4_3:46937774-46937793 None:intergenic 30.0%
ATTCCTTAGATTTCACTGAA+TGG + chr4_3:46938057-46938076 Msa0643710:intron 30.0%
ATACCATTCAGTGAAATCTA+AGG - chr4_3:46938063-46938082 None:intergenic 30.0%
TTTAGGAAAACATACCTTAC+TGG - chr4_3:46938097-46938116 None:intergenic 30.0%
GATCTTAAACTTTGATAAGC+TGG + chr4_3:46938277-46938296 Msa0643710:intron 30.0%
AAAAGATAGCACAACAAATG+TGG - chr4_3:46938491-46938510 None:intergenic 30.0%
!!! ACATTTGTTGTGCTATCTTT+TGG + chr4_3:46938490-46938509 Msa0643710:intron 30.0%
CCAAAAGATGTATTTAGTCA+TGG - chr4_3:46938592-46938611 Msa0643720:three_prime_UTR 30.0%
! CCATGACTAAATACATCTTT+TGG + chr4_3:46938589-46938608 Msa0643710:intron 30.0%
ACAAAGTCAATCTCTTGATT+GGG - chr4_3:46938628-46938647 Msa0643720:three_prime_UTR 30.0%
TGTCTCCTACATAATTTGAA+TGG + chr4_3:46938690-46938709 Msa0643710:intron 30.0%
GTAATATCATTCACATTCCA+CGG - chr4_3:46938746-46938765 Msa0643720:three_prime_UTR 30.0%
ATTATGGGTGAAAAACATCA+TGG - chr4_3:46938768-46938787 Msa0643720:three_prime_UTR 30.0%
CAGATTAATTGTAACCAAGT+TGG - chr4_3:46938814-46938833 Msa0643720:three_prime_UTR 30.0%
CAACTTGGTTACAATTAATC+TGG + chr4_3:46938812-46938831 Msa0643710:intron 30.0%
GAAATATAGATCAGTCTGAA+GGG - chr4_3:46938851-46938870 Msa0643720:three_prime_UTR 30.0%
AGAAATATAGATCAGTCTGA+AGG - chr4_3:46938852-46938871 Msa0643720:three_prime_UTR 30.0%
CTTTCATCACCTACATATAA+AGG + chr4_3:46939026-46939045 Msa0643710:intron 30.0%
! GTGAATATATGATTTGTACC+TGG + chr4_3:46939105-46939124 Msa0643710:intron 30.0%
CAAATCAATGACTATGTTCT+CGG - chr4_3:46939138-46939157 Msa0643720:three_prime_UTR 30.0%
! CATATGAATGTTTGAAGTGT+AGG - chr4_3:46939194-46939213 Msa0643720:intron 30.0%
! TCTGTAATTTTCCAAAGGTT+TGG + chr4_3:46939215-46939234 Msa0643710:intron 30.0%
! GTTTTCTAAGTGGTTACTTA+AGG - chr4_3:46939357-46939376 Msa0643720:intron 30.0%
! AGATTGAAGAGTTTTCTAAG+TGG - chr4_3:46939367-46939386 Msa0643720:intron 30.0%
CTTGATAAAAGCTACAACAA+TGG - chr4_3:46939901-46939920 Msa0643720:three_prime_UTR 30.0%
CAAGGATAGCAAAAAATTTC+AGG - chr4_3:46939977-46939996 Msa0643720:three_prime_UTR 30.0%
CATTAATGTGGTATCAAGAA+AGG - chr4_3:46940124-46940143 Msa0643720:three_prime_UTR 30.0%
AGATATAGGTGATCCTAATT+AGG - chr4_3:46940165-46940184 Msa0643720:three_prime_UTR 30.0%
TGATAACTTGGAAGAAGATT+CGG - chr4_3:46940395-46940414 Msa0643720:three_prime_UTR 30.0%
AATCTTCTTCCAAGTTATCA+TGG + chr4_3:46940395-46940414 Msa0643710:intron 30.0%
AGATATCAAACATCACACAT+TGG - chr4_3:46940577-46940596 Msa0643720:three_prime_UTR 30.0%
CATTGTGTAAAAACAGATAG+AGG + chr4_3:46940856-46940875 Msa0643710:intron 30.0%
!! TGACTTTGAAATATAGTAGG+CGG + chr4_3:46941049-46941068 Msa0643710:intron 30.0%
GATGAGTAGGTTTAGTATTA+AGG + chr4_3:46941150-46941169 Msa0643710:intron 30.0%
! AATATTTGAAAGTGGTCTTG+AGG + chr4_3:46941184-46941203 Msa0643710:intron 30.0%
TTAAACCAGTTGTAGATTGA+TGG + chr4_3:46941246-46941265 Msa0643710:intron 30.0%
TAAACCAGTTGTAGATTGAT+GGG + chr4_3:46941247-46941266 Msa0643710:intron 30.0%
!! GGTAGGTTTTATATTAAGTG+AGG + chr4_3:46941268-46941287 Msa0643710:intron 30.0%
! TTTTATATTAAGTGAGGGAG+AGG + chr4_3:46941274-46941293 Msa0643710:intron 30.0%
! AATATTTGAAAGTGGTCTTG+AGG + chr4_3:46941184-46941203 Msa0643710:intron 30.0%
TTGGCTAGGTTTACTATTTA+AGG + chr4_3:46941379-46941398 Msa0643710:intron 30.0%
! TATTTAAGGTAGCAGATTGT+TGG + chr4_3:46941393-46941412 Msa0643710:intron 30.0%
TCATTTCAGCTATAGATATC+AGG - chr4_3:46941511-46941530 Msa0643720:intron 30.0%
AGATATCAACAATAAGCCAA+TGG + chr4_3:46941605-46941624 Msa0643710:intron 30.0%
TATCTTCCAAATGGTGATAA+GGG - chr4_3:46941827-46941846 Msa0643720:intron 30.0%
TAGTTATTCTGCTATGATGA+TGG - chr4_3:46942002-46942021 Msa0643720:intron 30.0%
GTCTATATTCACTTCGAAAT+AGG + chr4_3:46942051-46942070 Msa0643710:intron 30.0%
ATATTCACTTCGAAATAGGT+TGG + chr4_3:46942055-46942074 Msa0643710:intron 30.0%
! AGGCTAGTAATTTGAAACAT+TGG + chr4_3:46942084-46942103 Msa0643710:intron 30.0%
TAACTAACCAACAGATGTAT+AGG + chr4_3:46942407-46942426 Msa0643710:intron 30.0%
! ACTTCACTTTGAAAGATTTG+AGG - chr4_3:46942491-46942510 Msa0643720:intron 30.0%
TTGAGATCATTACTAGGAAA+TGG - chr4_3:46942681-46942700 Msa0643730:CDS 30.0%
! CTTTTGTTGAGATCATTACT+AGG - chr4_3:46942687-46942706 Msa0643730:CDS 30.0%
CTAGTAATGATCTCAACAAA+AGG + chr4_3:46942685-46942704 Msa0643710:intron 30.0%
!! TTAAGTTGATATGGATTGGA+GGG - chr4_3:46942760-46942779 Msa0643730:intron 30.0%
!! TTTAAGTTGATATGGATTGG+AGG - chr4_3:46942761-46942780 Msa0643730:intron 30.0%
ATTGTTGACAAAAAGGTAAG+GGG - chr4_3:46942901-46942920 Msa0643730:intron 30.0%
!! AAATGGACTGTTGTTAAAGA+TGG - chr4_3:46942946-46942965 Msa0643730:CDS 30.0%
TTACCGATAAGAAAGATTTC+TGG - chr4_3:46942993-46943012 Msa0643730:CDS 30.0%
GAGAGACCATTTGAATTTAT+TGG - chr4_3:46943021-46943040 Msa0643730:CDS 30.0%
!!! ACAGGTCCTTATTTTGTTTA+TGG - chr4_3:46943269-46943288 None:intergenic 30.0%
!!! ACTTTTTTAACTTGTCTTGC+TGG - chr4_3:46943312-46943331 None:intergenic 30.0%
!!! CCTCCATTTGTTTTGTTTAT+TGG - chr4_3:46943575-46943594 None:intergenic 30.0%
CCAATAAACAAAACAAATGG+AGG + chr4_3:46943572-46943591 Msa0643710:intron 30.0%
! GTGAACCAAAATTGTGTTTT+TGG - chr4_3:46943657-46943676 None:intergenic 30.0%
TGTAGTAGTGTAGTTAGATT+GGG + chr4_3:46944049-46944068 Msa0643710:intron 30.0%
ATTGGGATGACAATGAAATT+GGG + chr4_3:46944066-46944085 Msa0643710:intron 30.0%
TAATGATGTCATGTAAGTAC+TGG - chr4_3:46944121-46944140 None:intergenic 30.0%
TATAAGAAAAGACTATGCTG+TGG - chr4_3:46944247-46944266 None:intergenic 30.0%
AACCAAAATTGTCTACGATT+CGG - chr4_3:46944511-46944530 None:intergenic 30.0%
GATAAGTTAGTTGAACTGTA+TGG + chr4_3:46944535-46944554 Msa0643710:intron 30.0%
!!! GGACTTGGTTTTTAAAACAT+TGG + chr4_3:46944560-46944579 Msa0643710:intron 30.0%
AAACTCGCAAACAAAACATT+AGG - chr4_3:46944713-46944732 None:intergenic 30.0%
!!! TAATGTTTTGTTTGCGAGTT+TGG + chr4_3:46944712-46944731 Msa0643710:intron 30.0%
TAAAATGAAGGACCATACTA+GGG - chr4_3:46944786-46944805 None:intergenic 30.0%
TTAAAATGAAGGACCATACT+AGG - chr4_3:46944787-46944806 None:intergenic 30.0%
! AGTATGGTCCTTCATTTTAA+AGG + chr4_3:46944787-46944806 Msa0643710:intron 30.0%
TTCATGAAACCTGTAATTGA+AGG - chr4_3:46944838-46944857 None:intergenic 30.0%
!!! CTTTTTTTAATGTGCAGCAT+TGG + chr4_3:46944893-46944912 Msa0643710:intron 30.0%
!!! GATTTTAGGATTCTGTAGAA+GGG - chr4_3:46944933-46944952 None:intergenic 30.0%
! AAATGATGGTTCTATACTTG+GGG - chr4_3:46944955-46944974 None:intergenic 30.0%
! AAGTTTATGGGTTAAATGGA+GGG - chr4_3:46945057-46945076 None:intergenic 30.0%
! CTAGAAGTTTATGGGTTAAA+TGG - chr4_3:46945061-46945080 None:intergenic 30.0%
TCCAACAATGTCTTTACTTA+GGG - chr4_3:46945102-46945121 None:intergenic 30.0%
CAATATGTTGCCGTAAAAAT+AGG + chr4_3:46945140-46945159 Msa0643710:intron 30.0%
!!! TTATTTGTTGCTTTTTGGTG+TGG - chr4_3:46945201-46945220 None:intergenic 30.0%
! TTTTTCCTGTTATATTGTGG+TGG - chr4_3:46945228-46945247 None:intergenic 30.0%
CTTCATGTTCCTAAATTTCT+TGG + chr4_3:46945284-46945303 Msa0643710:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr4_3:46945885-46945904 None:intergenic 30.0%
!!! TTTTAGTTCCCCAAATAATG+AGG + chr4_3:46945893-46945912 Msa0643710:intron 30.0%
! TTTAGTTCCCCAAATAATGA+GGG + chr4_3:46945894-46945913 Msa0643710:intron 30.0%
ATTGGAAGAGATAACTTTGA+GGG - chr4_3:46945945-46945964 None:intergenic 30.0%
GAGTTTGGAGATAAAAAGAA+GGG - chr4_3:46946012-46946031 None:intergenic 30.0%
! ATGGAGAAAATTTTGTGAAG+AGG + chr4_3:46946062-46946081 Msa0643710:intron 30.0%
TAATGAATCCACCAAATCAA+TGG + chr4_3:46946592-46946611 Msa0643710:CDS 30.0%
! TTAATATGGCTCCATTGATT+TGG - chr4_3:46946606-46946625 None:intergenic 30.0%
TGGAGCCATATTAATAATGA+TGG + chr4_3:46946612-46946631 Msa0643710:CDS 30.0%
CCTCTCCATCATTATTAATA+TGG - chr4_3:46946620-46946639 None:intergenic 30.0%
! CCATATTAATAATGATGGAG+AGG + chr4_3:46946617-46946636 Msa0643710:CDS 30.0%
GGACAGTTTATTTGATACAT+TGG + chr4_3:46946668-46946687 Msa0643710:CDS 30.0%
ATTATAATAGCTGTAGCAGC+GGG + chr4_3:46933167-46933186 Msa0643710:CDS 35.0%
CAAACAAAGTAGAAAAAGGG+CGG - chr4_3:46933279-46933298 None:intergenic 35.0%
TAAAAATTATTGGACGGTCC+CGG - chr4_3:46933481-46933500 None:intergenic 35.0%
AATCTAATGCAAGTAGGGAT+GGG + chr4_3:46933551-46933570 Msa0643710:intron 35.0%
! TTTTTGAATGATCTGTGGCT+TGG - chr4_3:46933698-46933717 None:intergenic 35.0%
! AAGGCTTTTTGAATGATCTG+TGG - chr4_3:46933703-46933722 None:intergenic 35.0%
TTTAAATAGGTCGGCCTAAA+AGG - chr4_3:46933722-46933741 None:intergenic 35.0%
! CATATAGGGCATGTTTGTTT+TGG + chr4_3:46933901-46933920 Msa0643710:intron 35.0%
!!! TTACTTTTTAGGCTTGAGTC+TGG - chr4_3:46934424-46934443 None:intergenic 35.0%
AACGCGTTTAAATTCCAAGT+TGG + chr4_3:46934578-46934597 Msa0643710:intron 35.0%
TGAAAAATGACTCTCCAACT+TGG - chr4_3:46934595-46934614 None:intergenic 35.0%
! TCCGGATTTTGTTAATATGG+AGG - chr4_3:46934655-46934674 None:intergenic 35.0%
! CTCTCCGGATTTTGTTAATA+TGG - chr4_3:46934658-46934677 None:intergenic 35.0%
TGCAATATTTCACAAGTGTG+AGG + chr4_3:46934817-46934836 Msa0643710:intron 35.0%
AATTCAACGTCTTTAACCGT+CGG - chr4_3:46934890-46934909 None:intergenic 35.0%
TAGACTATGCACAACAATTG+AGG - chr4_3:46935016-46935035 None:intergenic 35.0%
TTGTGCATAGTCTACTAGTA+GGG + chr4_3:46935022-46935041 Msa0643710:intron 35.0%
GTCTCTTAGAAATCATGGTT+GGG + chr4_3:46935326-46935345 Msa0643710:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG - chr4_3:46935394-46935413 None:intergenic 35.0%
CATTGTTAAGAGTCCTACAT+CGG - chr4_3:46935431-46935450 None:intergenic 35.0%
ATATCATTGAGTGTGGACAT+CGG + chr4_3:46935579-46935598 Msa0643710:intron 35.0%
!!! CAGTTTTTTTGACAGAGATC+TGG - chr4_3:46935661-46935680 None:intergenic 35.0%
ATGTGTGTGATGTTTCATGT+CGG + chr4_3:46935760-46935779 Msa0643710:intron 35.0%
AGAAAGAGAATAAGAACCAG+GGG + chr4_3:46935915-46935934 Msa0643710:intron 35.0%
! TTTTGTCTCCCACAAACTAA+AGG + chr4_3:46936119-46936138 Msa0643710:intron 35.0%
!! GGTGTTAATCCTTTAGTTTG+TGG - chr4_3:46936131-46936150 None:intergenic 35.0%
CCGTATGTAAAGAGAGTTAA+TGG + chr4_3:46936501-46936520 Msa0643710:intron 35.0%
ATGTTACTCTCCGTTAACAA+AGG - chr4_3:46936558-46936577 None:intergenic 35.0%
ATAGAAGCAAGAGAAATCAG+AGG + chr4_3:46936649-46936668 Msa0643710:intron 35.0%
TCACACACTTATATTTGACC+CGG + chr4_3:46937094-46937113 Msa0643710:intron 35.0%
! GACATTGTGGTTTGTAACAT+TGG + chr4_3:46937241-46937260 Msa0643710:intron 35.0%
TTTGTACACTTGTGACATTG+TGG + chr4_3:46937323-46937342 Msa0643710:intron 35.0%
! GTTAGTGATATTGGTGACAT+TGG - chr4_3:46937353-46937372 None:intergenic 35.0%
GACATTGTGGTTAGTGATAT+TGG - chr4_3:46937362-46937381 None:intergenic 35.0%
TATTAACCCCGGAAATACTT+GGG - chr4_3:46937386-46937405 None:intergenic 35.0%
ATATTAACCCCGGAAATACT+TGG - chr4_3:46937387-46937406 None:intergenic 35.0%
ACACACGAATATATTAACCC+CGG - chr4_3:46937397-46937416 None:intergenic 35.0%
GGACATCAATTCCAAATAAG+TGG - chr4_3:46937437-46937456 None:intergenic 35.0%
ACTTGATGCATGTGTTTGTT+GGG - chr4_3:46937831-46937850 None:intergenic 35.0%
TACTTGATGCATGTGTTTGT+TGG - chr4_3:46937832-46937851 None:intergenic 35.0%
! TCAAGTACTGTAGCTAATTG+TGG + chr4_3:46937845-46937864 Msa0643710:intron 35.0%
TGCAGATCATGGAATTTGAA+AGG + chr4_3:46937936-46937955 Msa0643710:intron 35.0%
AGCTTACAGATGTACATATC+AGG + chr4_3:46938227-46938246 Msa0643710:intron 35.0%
TCAAGAGTTACAAGCAAGAA+GGG - chr4_3:46938550-46938569 None:intergenic 35.0%
TAGTCATGGGCAAATATATG+TGG - chr4_3:46938578-46938597 None:intergenic 35.0%
CACAAAGTCAATCTCTTGAT+TGG - chr4_3:46938629-46938648 Msa0643720:three_prime_UTR 35.0%
CATGGCCATTCAAATTATGT+AGG - chr4_3:46938698-46938717 Msa0643720:three_prime_UTR 35.0%
CTACATAATTTGAATGGCCA+TGG + chr4_3:46938696-46938715 Msa0643710:intron 35.0%
GTCCTTGAAGCTAAGATTAT+GGG - chr4_3:46938783-46938802 Msa0643720:three_prime_UTR 35.0%
TGTCCTTGAAGCTAAGATTA+TGG - chr4_3:46938784-46938803 Msa0643720:three_prime_UTR 35.0%
CTTAGTAAACTGCTTACATC+TGG - chr4_3:46938927-46938946 Msa0643720:three_prime_UTR 35.0%
CATGCTCTTCCTTTATATGT+AGG - chr4_3:46939038-46939057 Msa0643720:intron 35.0%
! TTTGAAGTGTAGGGCAATAT+TGG - chr4_3:46939184-46939203 Msa0643720:intron 35.0%
AGAGTACATATCCAAACCTT+TGG - chr4_3:46939229-46939248 Msa0643720:intron 35.0%
ATTTCGGCAAATCCATCATT+TGG + chr4_3:46939308-46939327 Msa0643710:intron 35.0%
TAAGTGGTTACTTAAGGTTG+GGG - chr4_3:46939351-46939370 Msa0643720:intron 35.0%
CTAAGTGGTTACTTAAGGTT+GGG - chr4_3:46939352-46939371 Msa0643720:intron 35.0%
TCTAAGTGGTTACTTAAGGT+TGG - chr4_3:46939353-46939372 Msa0643720:intron 35.0%
ATATCTGACCTATTACCTCT+AGG + chr4_3:46939494-46939513 Msa0643710:intron 35.0%
CAGTTATACCTAGAGGTAAT+AGG - chr4_3:46939505-46939524 Msa0643720:intron 35.0%
CTATTACCTCTAGGTATAAC+TGG + chr4_3:46939503-46939522 Msa0643710:intron 35.0%
ATACTTCCAGTTATACCTAG+AGG - chr4_3:46939512-46939531 Msa0643720:intron 35.0%
CAGAAAATGAAGTCTCAAAC+AGG - chr4_3:46939768-46939787 Msa0643720:three_prime_UTR 35.0%
TGTCCTTGAAGTCTTAAAGT+TGG + chr4_3:46939865-46939884 Msa0643710:intron 35.0%
! CTTTTATCAAGTTCCATACC+TGG + chr4_3:46939910-46939929 Msa0643710:intron 35.0%
ATGTTCTCATTTACTTCTCC+AGG - chr4_3:46939931-46939950 Msa0643720:three_prime_UTR 35.0%
!!! ATTTTTTGCTATCCTTGCTC+TGG + chr4_3:46939980-46939999 Msa0643710:intron 35.0%
! CTTATTTGATAACCAGAGCA+AGG - chr4_3:46939995-46940014 Msa0643720:three_prime_UTR 35.0%
AAATAAGAGATGTGAAGCAG+AGG + chr4_3:46940008-46940027 Msa0643710:intron 35.0%
TTCCACTGCACAAACATATA+TGG + chr4_3:46940063-46940082 Msa0643710:intron 35.0%
TTCCATATATGTTTGTGCAG+TGG - chr4_3:46940068-46940087 Msa0643720:three_prime_UTR 35.0%
ATCTTCATCAGAGCTTGATT+CGG + chr4_3:46940330-46940349 Msa0643710:intron 35.0%
!! AAGAAGTATTTGCTCCAGTT+TGG + chr4_3:46940509-46940528 Msa0643710:intron 35.0%
!! AATGCAGCTTTTGATGATTG+AGG + chr4_3:46940652-46940671 Msa0643710:intron 35.0%
TAATCTTCTTGACAGGTTTG+CGG - chr4_3:46940695-46940714 Msa0643720:three_prime_UTR 35.0%
TCCAAAACCAACTAATCAGA+GGG - chr4_3:46940740-46940759 Msa0643720:three_prime_UTR 35.0%
TTCCAAAACCAACTAATCAG+AGG - chr4_3:46940741-46940760 Msa0643720:three_prime_UTR 35.0%
TTGAACATTAGACTGAGAAG+TGG + chr4_3:46940792-46940811 Msa0643710:intron 35.0%
! CTGTTTTGCAAGTACATCAA+AGG - chr4_3:46940933-46940952 Msa0643720:three_prime_UTR 35.0%
TTGTTGTGAATATTGTAGGC+AGG + chr4_3:46941019-46941038 Msa0643710:intron 35.0%
TAATGCTGGTATTACTTCTC+AGG - chr4_3:46941126-46941145 Msa0643720:CDS 35.0%
!! AGTTTTTGAGAACGCAACAT+TGG + chr4_3:46941214-46941233 Msa0643710:intron 35.0%
GGAGAGGTAATATTTGAAAG+TGG + chr4_3:46941290-46941309 Msa0643710:intron 35.0%
TGAAACCTGCATTAGATTGT+TGG + chr4_3:46941360-46941379 Msa0643710:intron 35.0%
AGACTTAACCTGATAGCATT+TGG + chr4_3:46941456-46941475 Msa0643710:intron 35.0%
GATCCAGCTATATATAAAGC+TGG + chr4_3:46941483-46941502 Msa0643710:intron 35.0%
! GTTCCAGCTTTATATATAGC+TGG - chr4_3:46941489-46941508 Msa0643720:CDS 35.0%
! TCCATGTTTCTACATGTCTT+TGG + chr4_3:46941745-46941764 Msa0643710:intron 35.0%
TCCAAAGACATGTAGAAACA+TGG - chr4_3:46941749-46941768 Msa0643720:intron 35.0%
TCAAAACCCTTATCACCATT+TGG + chr4_3:46941818-46941837 Msa0643710:intron 35.0%
CTATCTTCCAAATGGTGATA+AGG - chr4_3:46941828-46941847 Msa0643720:intron 35.0%
AGACTTCACTATCTTCCAAA+TGG - chr4_3:46941836-46941855 Msa0643720:intron 35.0%
!! GCTATGATGATGGTTTGTTA+TGG - chr4_3:46941992-46942011 Msa0643720:intron 35.0%
TACTAAATTCCCACATTTCC+AGG - chr4_3:46942206-46942225 Msa0643720:CDS 35.0%
GCAATGATATCCATCAACAT+AGG + chr4_3:46942323-46942342 Msa0643710:intron 35.0%
! TTTGGAACATCCTATGTTGA+TGG - chr4_3:46942336-46942355 Msa0643720:intron 35.0%
! GAAAGATTTGAGGTATGATC+TGG - chr4_3:46942481-46942500 Msa0643720:intron 35.0%
ATTGGAGTTGTAGCTGATAT+GGG - chr4_3:46942554-46942573 Msa0643720:intron 35.0%
TATTGGAGTTGTAGCTGATA+TGG - chr4_3:46942555-46942574 Msa0643720:intron 35.0%
! GTAAGTCAACATTCTAAGAG+TGG - chr4_3:46942639-46942658 None:intergenic 35.0%
GAACAATGATCTGATGTTCA+AGG - chr4_3:46942798-46942817 Msa0643730:intron 35.0%
CTCTTCTAGTACTTTGTCAT+AGG + chr4_3:46942853-46942872 Msa0643710:intron 35.0%
!! TAAAGATGGAAAGGAGCATT+TGG - chr4_3:46942932-46942951 Msa0643730:CDS 35.0%
GACTGTTGTTAAAGATGGAA+AGG - chr4_3:46942941-46942960 Msa0643730:CDS 35.0%
CTGTGAAAGTGAAAGACAAA+TGG - chr4_3:46942963-46942982 Msa0643730:CDS 35.0%
GAGTGATTAAGCACAAAAAC+TGG + chr4_3:46943095-46943114 Msa0643710:intron 35.0%
TGATTAAGTGAAATGGTGAG+TGG + chr4_3:46943151-46943170 Msa0643710:intron 35.0%
!!! TGGTTTGATGGACTTTTATC+AGG - chr4_3:46943292-46943311 None:intergenic 35.0%
TAAGTTCGTAACACACAAGA+AGG + chr4_3:46943456-46943475 Msa0643710:intron 35.0%
AAGTTCGTAACACACAAGAA+GGG + chr4_3:46943457-46943476 Msa0643710:intron 35.0%
AACAACTGCATTTATGTGGT+AGG - chr4_3:46943846-46943865 None:intergenic 35.0%
TAGCAACAACTGCATTTATG+TGG - chr4_3:46943850-46943869 None:intergenic 35.0%
! GAGAAGTCTGAAGTATAGAT+TGG + chr4_3:46943960-46943979 Msa0643710:intron 35.0%
! GTCTGAAGTATAGATTGGAA+AGG + chr4_3:46943965-46943984 Msa0643710:intron 35.0%
AACTACACTACTACACTGTT+CGG - chr4_3:46944044-46944063 None:intergenic 35.0%
GTGTAGTAGTGTAGTTAGAT+TGG + chr4_3:46944048-46944067 Msa0643710:intron 35.0%
GATTGGGATGACAATGAAAT+TGG + chr4_3:46944065-46944084 Msa0643710:intron 35.0%
TTGTAAGCAAGGGTAAAACT+TGG + chr4_3:46944217-46944236 Msa0643710:intron 35.0%
GTAGTTGAACCATAACTTAG+AGG - chr4_3:46944439-46944458 None:intergenic 35.0%
!!! TCGTAGACAATTTTGGTTCA+TGG + chr4_3:46944513-46944532 Msa0643710:intron 35.0%
AGTTAGTTGAACTGTATGGT+TGG + chr4_3:46944539-46944558 Msa0643710:intron 35.0%
AAAATGAAGGACCATACTAG+GGG - chr4_3:46944785-46944804 None:intergenic 35.0%
! TAATTGAAGGTCACTTTGAG+AGG - chr4_3:46944825-46944844 None:intergenic 35.0%
TCAAAGTGACCTTCAATTAC+AGG + chr4_3:46944826-46944845 Msa0643710:intron 35.0%
!!! GGATTTTAGGATTCTGTAGA+AGG - chr4_3:46944934-46944953 None:intergenic 35.0%
! GTTCTATACTTGGGGATTTT+AGG - chr4_3:46944947-46944966 None:intergenic 35.0%
AGAAGAAGAAGACAGTAGTA+GGG - chr4_3:46945006-46945025 None:intergenic 35.0%
TAGAAGAAGAAGACAGTAGT+AGG - chr4_3:46945007-46945026 None:intergenic 35.0%
! AGTTTATGGGTTAAATGGAG+GGG - chr4_3:46945056-46945075 None:intergenic 35.0%
! GAAGTTTATGGGTTAAATGG+AGG - chr4_3:46945058-46945077 None:intergenic 35.0%
TCCCTAAGTAAAGACATTGT+TGG + chr4_3:46945098-46945117 Msa0643710:intron 35.0%
CTCCAACAATGTCTTTACTT+AGG - chr4_3:46945103-46945122 None:intergenic 35.0%
AACTACCACCACAATATAAC+AGG + chr4_3:46945220-46945239 Msa0643710:intron 35.0%
CTAAATTTCTTGGATGCAGA+CGG + chr4_3:46945294-46945313 Msa0643710:intron 35.0%
TAAATTTCTTGGATGCAGAC+GGG + chr4_3:46945295-46945314 Msa0643710:intron 35.0%
!! TCATTTTAAAGGTCCACTCA+TGG - chr4_3:46945692-46945711 None:intergenic 35.0%
!!! TTTTTTGGAAGCCCCTAATA+TGG - chr4_3:46945719-46945738 None:intergenic 35.0%
CATTGGAAGAGATAACTTTG+AGG - chr4_3:46945946-46945965 None:intergenic 35.0%
GTGGAAGAAATAGAAGACAT+TGG - chr4_3:46945963-46945982 None:intergenic 35.0%
GGAAAAAATGAAGGAGTAAG+TGG - chr4_3:46945982-46946001 None:intergenic 35.0%
TTGGAGATAAAAAGAAGGGA+GGG - chr4_3:46946008-46946027 None:intergenic 35.0%
TTTGGAGATAAAAAGAAGGG+AGG - chr4_3:46946009-46946028 None:intergenic 35.0%
CGAGTTTGGAGATAAAAAGA+AGG - chr4_3:46946013-46946032 None:intergenic 35.0%
!!! TTAGGTTTTGTTTGCGAGTT+TGG - chr4_3:46946027-46946046 None:intergenic 35.0%
AAACTCGCAAACAAAACCTA+AGG + chr4_3:46946026-46946045 Msa0643710:intron 35.0%
AACTCGCAAACAAAACCTAA+GGG + chr4_3:46946027-46946046 Msa0643710:intron 35.0%
!! AATTTTGGTGTGACACTTTG+TGG + chr4_3:46946321-46946340 Msa0643710:intron 35.0%
TTGGGAATCAGTATGTTTGT+AGG + chr4_3:46946508-46946527 Msa0643710:intron 35.0%
GTATGTTTGTAGGAAGACAT+TGG + chr4_3:46946518-46946537 Msa0643710:intron 35.0%
AAGATGAGGAAGAAGAGAAT+TGG + chr4_3:46946646-46946665 Msa0643710:CDS 35.0%
AGATGAGGAAGAAGAGAATT+GGG + chr4_3:46946647-46946666 Msa0643710:CDS 35.0%
TAATGCTCCTCTGCATCAAT+CGG - chr4_3:46933219-46933238 None:intergenic 40.0%
! CATCATTCTTTTGCAGAGAG+TGG - chr4_3:46933246-46933265 None:intergenic 40.0%
GCTTGATCAAGAAAATGGTG+CGG + chr4_3:46933306-46933325 Msa0643710:CDS 40.0%
AAAAATTATTGGACGGTCCC+GGG - chr4_3:46933480-46933499 None:intergenic 40.0%
GAATCTAATGCAAGTAGGGA+TGG + chr4_3:46933550-46933569 Msa0643710:intron 40.0%
!! GAAAAAAGTTTGGTTTGGCC+TGG - chr4_3:46933625-46933644 None:intergenic 40.0%
GCTTAGGCCTTCAAACAAAT+TGG + chr4_3:46934467-46934486 Msa0643710:intron 40.0%
AGTCCAAACCCTTGGATTTA+GGG - chr4_3:46934544-46934563 None:intergenic 40.0%
GTTTGGACTCCTCAGATATT+AGG + chr4_3:46934555-46934574 Msa0643710:intron 40.0%
AAACGCGTTCCTAATATCTG+AGG - chr4_3:46934567-46934586 None:intergenic 40.0%
! GTCTACAATTTTATCGCCGA+CGG + chr4_3:46934871-46934890 Msa0643710:intron 40.0%
GTTGTGCATAGTCTACTAGT+AGG + chr4_3:46935021-46935040 Msa0643710:intron 40.0%
GAGACGTCTCTTAGAAATCA+TGG + chr4_3:46935321-46935340 Msa0643710:intron 40.0%
CGTCTCTTAGAAATCATGGT+TGG + chr4_3:46935325-46935344 Msa0643710:intron 40.0%
TGTGTGTGATGTTTCATGTC+GGG + chr4_3:46935761-46935780 Msa0643710:intron 40.0%
!! TGTAATGGGCTTTGTAGTAC+TGG + chr4_3:46937059-46937078 Msa0643710:intron 40.0%
AGTGTTAACAGGTGACATTG+TGG + chr4_3:46937228-46937247 Msa0643710:intron 40.0%
GAAAGACACTTGTGACATTG+TGG - chr4_3:46937271-46937290 None:intergenic 40.0%
GAAATACTTGGGTGACATTG+TGG - chr4_3:46937375-46937394 None:intergenic 40.0%
CAATGTCACCCAAGTATTTC+CGG + chr4_3:46937375-46937394 Msa0643710:intron 40.0%
AATGTCACCCAAGTATTTCC+GGG + chr4_3:46937376-46937395 Msa0643710:intron 40.0%
AAGAAGAAAGCTGCAGATCA+TGG + chr4_3:46937925-46937944 Msa0643710:intron 40.0%
ATCTGTAAGCTGCTAATCTC+AGG - chr4_3:46938218-46938237 None:intergenic 40.0%
GATTAGAGAGCAAACTGTTG+AGG + chr4_3:46938328-46938347 Msa0643710:intron 40.0%
CTCAAGAGTTACAAGCAAGA+AGG - chr4_3:46938551-46938570 None:intergenic 40.0%
AGTCAATCTCTTGATTGGGT+TGG - chr4_3:46938624-46938643 Msa0643720:three_prime_UTR 40.0%
TATCATTCACATTCCACGGA+TGG - chr4_3:46938742-46938761 Msa0643720:three_prime_UTR 40.0%
CACCCATAATCTTAGCTTCA+AGG + chr4_3:46938778-46938797 Msa0643710:intron 40.0%
CTTAGCTTCAAGGACATGAT+TGG + chr4_3:46938788-46938807 Msa0643710:intron 40.0%
ACTCTGCACAATTGCAAGAA+TGG + chr4_3:46939244-46939263 Msa0643710:intron 40.0%
CTCTGCACAATTGCAAGAAT+GGG + chr4_3:46939245-46939264 Msa0643710:intron 40.0%
AAGGTATGTGAGCCAAATGA+TGG - chr4_3:46939323-46939342 Msa0643720:intron 40.0%
!! TGGAAGTATCTACCTTAGCA+TGG + chr4_3:46939523-46939542 Msa0643710:intron 40.0%
TGAGAATAACGTCCATGCTA+AGG - chr4_3:46939538-46939557 Msa0643720:intron 40.0%
GTAACATGCTTCCAATTCTG+TGG + chr4_3:46939836-46939855 Msa0643710:intron 40.0%
!! CCACCAACTTTAAGACTTCA+AGG - chr4_3:46939871-46939890 Msa0643720:three_prime_UTR 40.0%
CCTTGAAGTCTTAAAGTTGG+TGG + chr4_3:46939868-46939887 Msa0643710:intron 40.0%
AAAAGCTACAACAATGGCAG+AGG - chr4_3:46939895-46939914 Msa0643720:three_prime_UTR 40.0%
CTCATTTACTTCTCCAGGTA+TGG - chr4_3:46939926-46939945 Msa0643720:three_prime_UTR 40.0%
! GGTGGAGGTTGATCTAATAA+AGG + chr4_3:46940029-46940048 Msa0643710:intron 40.0%
! AGCTATGTGGAGCATTAATG+TGG - chr4_3:46940136-46940155 Msa0643720:three_prime_UTR 40.0%
!! AATTAGGAGTGTCAGCTATG+TGG - chr4_3:46940149-46940168 Msa0643720:three_prime_UTR 40.0%
CATAGCTGACACTCCTAATT+AGG + chr4_3:46940149-46940168 Msa0643710:intron 40.0%
!! GCTTTTGATGATTGAGGATC+AGG + chr4_3:46940658-46940677 Msa0643710:intron 40.0%
! TTGATGATTGAGGATCAGGT+TGG + chr4_3:46940662-46940681 Msa0643710:intron 40.0%
! CTGGTGTTAATCTTCTTGAC+AGG - chr4_3:46940702-46940721 Msa0643720:three_prime_UTR 40.0%
AGGGAAAGAAGATGTGTATC+TGG - chr4_3:46940721-46940740 Msa0643720:three_prime_UTR 40.0%
CTTCTTTCCCTCTGATTAGT+TGG + chr4_3:46940730-46940749 Msa0643710:intron 40.0%
!! TCCCTCTGATTAGTTGGTTT+TGG + chr4_3:46940736-46940755 Msa0643710:intron 40.0%
GACTGCACTATTCTCTTAAC+AGG + chr4_3:46940902-46940921 Msa0643710:intron 40.0%
!! GTGCGTTTTATTCCAACTTG+AGG + chr4_3:46940959-46940978 Msa0643710:intron 40.0%
CCTACTCATCAATCTAATGC+TGG - chr4_3:46941140-46941159 Msa0643720:CDS 40.0%
CCAGCATTAGATTGATGAGT+AGG + chr4_3:46941137-46941156 Msa0643710:intron 40.0%
GATCACAACCAAATGCTATC+AGG - chr4_3:46941467-46941486 Msa0643720:CDS 40.0%
TAGCTATATACGATGCGTAC+AGG + chr4_3:46941647-46941666 Msa0643710:intron 40.0%
ATATACGATGCGTACAGGTT+TGG + chr4_3:46941652-46941671 Msa0643710:intron 40.0%
!! TCACTTCGAAATAGGTTGGT+AGG + chr4_3:46942059-46942078 Msa0643710:intron 40.0%
!! CACTTCGAAATAGGTTGGTA+GGG + chr4_3:46942060-46942079 Msa0643710:intron 40.0%
!! ACATTGGTGATGTTCACGTA+TGG + chr4_3:46942100-46942119 Msa0643710:intron 40.0%
CATACATGTCTTGACTCCTA+TGG - chr4_3:46942160-46942179 Msa0643720:intron 40.0%
AGTAGCGATAACTTCAGCAA+AGG + chr4_3:46942222-46942241 Msa0643710:intron 40.0%
!! ACAGATGCTGATTTCCATCT+AGG + chr4_3:46942268-46942287 Msa0643710:intron 40.0%
CATAGGATGTTCCAAACGAT+TGG + chr4_3:46942340-46942359 Msa0643710:intron 40.0%
TTCTGTCAGCTTAAGGAACT+GGG - chr4_3:46942530-46942549 Msa0643720:CDS 40.0%
TTTCTGTCAGCTTAAGGAAC+TGG - chr4_3:46942531-46942550 Msa0643720:CDS 40.0%
TATGGGTTTCTGTCAGCTTA+AGG - chr4_3:46942537-46942556 Msa0643720:CDS 40.0%
!! TGGAAAGGAGCATTTGGAAT+TGG - chr4_3:46942926-46942945 Msa0643730:CDS 40.0%
!!! TGATGGACTTTTATCAGGAC+AGG - chr4_3:46943287-46943306 None:intergenic 40.0%
!! AACTTGTCTTGCTGGTTTGA+TGG - chr4_3:46943304-46943323 None:intergenic 40.0%
! GACTCCTTTTACCCTTAAGT+AGG + chr4_3:46944181-46944200 Msa0643710:intron 40.0%
GTCTCCTACTTAAGGGTAAA+AGG - chr4_3:46944188-46944207 None:intergenic 40.0%
! AGCCGAATCGTAGACAATTT+TGG + chr4_3:46944506-46944525 Msa0643710:intron 40.0%
TTGAACTGTATGGTTGGACT+TGG + chr4_3:46944545-46944564 Msa0643710:intron 40.0%
!!! TGTTTTGTTTGCGAGTTTGG+AGG + chr4_3:46944715-46944734 Msa0643710:intron 40.0%
!!! GTTTTGTTTGCGAGTTTGGA+GGG + chr4_3:46944716-46944735 Msa0643710:intron 40.0%
!! TTTTGTTTGCGAGTTTGGAG+GGG + chr4_3:46944717-46944736 Msa0643710:intron 40.0%
!! TGGGTGGACCTTTAAAATGA+AGG - chr4_3:46944798-46944817 None:intergenic 40.0%
CGTCTGCATCCAAGAAATTT+AGG - chr4_3:46945296-46945315 None:intergenic 40.0%
! TTGCTGTGTTGTTCTCTTTG+TGG - chr4_3:46945476-46945495 None:intergenic 40.0%
TAGGGGCTTCCAAAAAATAC+AGG + chr4_3:46945722-46945741 Msa0643710:intron 40.0%
GGAGGGTTTGGAAAAAATGA+AGG - chr4_3:46945991-46946010 None:intergenic 40.0%
GATAAAAAGAAGGGAGGGTT+TGG - chr4_3:46946003-46946022 None:intergenic 40.0%
CATTCATTGGAGTTTCCCTT+AGG - chr4_3:46946045-46946064 None:intergenic 40.0%
CTAAGGGAAACTCCAATGAA+TGG + chr4_3:46946043-46946062 Msa0643710:intron 40.0%
!! ATATGGCTCCATTGATTTGG+TGG - chr4_3:46946603-46946622 None:intergenic 40.0%
TGGAGAGGAATTAGAAGATG+AGG + chr4_3:46946632-46946651 Msa0643710:CDS 40.0%
! TCATGAGCAAGATTTGGAGT+AGG - chr4_3:46946696-46946715 None:intergenic 40.0%
ACAAAGTAGAAAAAGGGCGG+TGG - chr4_3:46933276-46933295 None:intergenic 45.0%
ATCAAGAAAATGGTGCGGTG+CGG + chr4_3:46933311-46933330 Msa0643710:CDS 45.0%
!! CAGTACTGGTGATCTTGATC+AGG + chr4_3:46933342-46933361 Msa0643710:CDS 45.0%
AGCTAGACATCCGTTTGTAG+AGG + chr4_3:46933442-46933461 Msa0643710:intron 45.0%
CGAATCTACGCCTCTACAAA+CGG - chr4_3:46933455-46933474 None:intergenic 45.0%
ATGCAAGTAGGGATGGGAAT+AGG + chr4_3:46933557-46933576 Msa0643710:intron 45.0%
TTTGTTTGAAGGCCTAAGCC+TGG - chr4_3:46934466-46934485 None:intergenic 45.0%
AGGCCTTCAAACAAATTGGC+AGG + chr4_3:46934471-46934490 Msa0643710:intron 45.0%
! TGGCCTGCCAATTTGTTTGA+AGG - chr4_3:46934477-46934496 None:intergenic 45.0%
TTGGATTTAGGGGTGGGAAT+AGG - chr4_3:46934533-46934552 None:intergenic 45.0%
TATTCCCACCCCTAAATCCA+AGG + chr4_3:46934532-46934551 Msa0643710:intron 45.0%
ATTCCCACCCCTAAATCCAA+GGG + chr4_3:46934533-46934552 Msa0643710:intron 45.0%
AAACCCTTGGATTTAGGGGT+GGG - chr4_3:46934539-46934558 None:intergenic 45.0%
GTCCAAACCCTTGGATTTAG+GGG - chr4_3:46934543-46934562 None:intergenic 45.0%
GAGTCCAAACCCTTGGATTT+AGG - chr4_3:46934545-46934564 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+TGG + chr4_3:46935350-46935369 Msa0643710:intron 45.0%
!! ACCTCACAAGCCAGTTTTGT+GGG - chr4_3:46935363-46935382 None:intergenic 45.0%
CACCATCTCATATCCGATGT+AGG + chr4_3:46935415-46935434 Msa0643710:intron 45.0%
GTCCTACATCGGATATGAGA+TGG - chr4_3:46935420-46935439 None:intergenic 45.0%
!! TAATGGAGTAATGGACACCC+TGG + chr4_3:46935469-46935488 Msa0643710:intron 45.0%
GTGTGTGATGTTTCATGTCG+GGG + chr4_3:46935762-46935781 Msa0643710:intron 45.0%
TGTGTGATGTTTCATGTCGG+GGG + chr4_3:46935763-46935782 Msa0643710:intron 45.0%
AAGAGAATAAGAACCAGGGG+CGG + chr4_3:46935918-46935937 Msa0643710:intron 45.0%
! TTCTTTTCCTCTGGGCTGTA+AGG - chr4_3:46936612-46936631 None:intergenic 45.0%
TTACAGCCCAGAGGAAAAGA+AGG + chr4_3:46936611-46936630 Msa0643710:intron 45.0%
! TCCTCACCTTCTTTTCCTCT+GGG - chr4_3:46936620-46936639 None:intergenic 45.0%
! ATCCTCACCTTCTTTTCCTC+TGG - chr4_3:46936621-46936640 None:intergenic 45.0%
TATAAATCATCCACCCCGAC+GGG - chr4_3:46936722-46936741 None:intergenic 45.0%
GTATAAATCATCCACCCCGA+CGG - chr4_3:46936723-46936742 None:intergenic 45.0%
TCGGGGTGGATGATTTATAC+AGG + chr4_3:46936723-46936742 Msa0643710:intron 45.0%
GACACTTGTGACATTGTGGT+TGG - chr4_3:46937267-46937286 None:intergenic 45.0%
ATGTCACCCAAGTATTTCCG+GGG + chr4_3:46937377-46937396 Msa0643710:intron 45.0%
!! GGTTCTGAGTTCAAAAGAGC+AGG + chr4_3:46937896-46937915 Msa0643710:intron 45.0%
TGCTCTCTAATCTCCAACTG+AGG - chr4_3:46938320-46938339 None:intergenic 45.0%
AATGGCCATGGAGATTGAGA+AGG + chr4_3:46938708-46938727 Msa0643710:intron 45.0%
TGTCACCTTCTCAATCTCCA+TGG - chr4_3:46938716-46938735 Msa0643720:three_prime_UTR 45.0%
! AAGGACATGATTGGCCAACT+TGG + chr4_3:46938797-46938816 Msa0643710:intron 45.0%
CAGTCTGAAGGGTTATGCAA+TGG - chr4_3:46938840-46938859 Msa0643720:three_prime_UTR 45.0%
TATGTTCTCGGACTAATGCC+AGG - chr4_3:46939126-46939145 Msa0643720:three_prime_UTR 45.0%
TGGTTACTTAAGGTTGGGGA+GGG - chr4_3:46939347-46939366 Msa0643720:intron 45.0%
TTAGGACGTTGTCCAGCTAA+TGG + chr4_3:46939814-46939833 Msa0643710:intron 45.0%
! GGAAGCATGTTACCATTAGC+TGG - chr4_3:46939829-46939848 Msa0643720:three_prime_UTR 45.0%
GGACAAATCTGCCACAGAAT+TGG - chr4_3:46939850-46939869 Msa0643720:three_prime_UTR 45.0%
TAAGAGATGTGAAGCAGAGG+TGG + chr4_3:46940011-46940030 Msa0643710:intron 45.0%
GTATTTGCTCCAGTTTGGAG+AGG + chr4_3:46940514-46940533 Msa0643710:intron 45.0%
GATTCATCACCTCTCCAAAC+TGG - chr4_3:46940526-46940545 Msa0643720:three_prime_UTR 45.0%
ACATTAGACTGAGAAGTGGC+TGG + chr4_3:46940796-46940815 Msa0643710:intron 45.0%
GAAGGTAGAACTCCTCAAGT+TGG - chr4_3:46940974-46940993 Msa0643720:three_prime_UTR 45.0%
TGAGGAGTTCTACCTTCAAC+AGG + chr4_3:46940977-46940996 Msa0643710:intron 45.0%
GAGACTGTCAAACCTGTTGA+AGG - chr4_3:46940992-46941011 Msa0643720:three_prime_UTR 45.0%
CCTACCCATCAATCTACAAC+TGG - chr4_3:46941254-46941273 Msa0643720:CDS 45.0%
! CCAGTTGTAGATTGATGGGT+AGG + chr4_3:46941251-46941270 Msa0643710:intron 45.0%
CCTAGCCAACAATCTAATGC+AGG - chr4_3:46941368-46941387 Msa0643720:CDS 45.0%
! CCTGCATTAGATTGTTGGCT+AGG + chr4_3:46941365-46941384 Msa0643710:intron 45.0%
! AAGGTAGCAGATTGTTGGCT+AGG + chr4_3:46941398-46941417 Msa0643710:intron 45.0%
AAGTTAAGTGGCAGCCTAGA+TGG - chr4_3:46942285-46942304 Msa0643720:intron 45.0%
GGCTGGAATTACCAATCGTT+TGG - chr4_3:46942354-46942373 Msa0643720:intron 45.0%
CAGCTTAAGGAACTGGGAAA+AGG - chr4_3:46942524-46942543 Msa0643720:CDS 45.0%
TTACCCTTAAGTAGGAGACG+TGG + chr4_3:46944189-46944208 Msa0643710:intron 45.0%
!! ACGTGGCTGATTTGTAAGCA+AGG + chr4_3:46944206-46944225 Msa0643710:intron 45.0%
!! CGTGGCTGATTTGTAAGCAA+GGG + chr4_3:46944207-46944226 Msa0643710:intron 45.0%
AAGGAAGGAAGGAAGGACTT+TGG + chr4_3:46944741-46944760 Msa0643710:intron 45.0%
AGGAAGGAAGGAAGGACTTT+GGG + chr4_3:46944742-46944761 Msa0643710:intron 45.0%
! GACTTTGGGGGTGAGAAATA+CGG + chr4_3:46944756-46944775 Msa0643710:intron 45.0%
AAATACGGAAGCCCCTAGTA+TGG + chr4_3:46944771-46944790 Msa0643710:intron 45.0%
! GGTCACTTTGAGAGGAGTAT+GGG - chr4_3:46944817-46944836 None:intergenic 45.0%
! AGGTCACTTTGAGAGGAGTA+TGG - chr4_3:46944818-46944837 None:intergenic 45.0%
CAGAGGGAGGAGTAAAATGA+TGG - chr4_3:46944969-46944988 None:intergenic 45.0%
GGATGAACAGAGAAGACAGA+GGG - chr4_3:46944985-46945004 None:intergenic 45.0%
TCCCAAACTCTATAAACGCG+TGG + chr4_3:46945318-46945337 Msa0643710:intron 45.0%
GCCACGCGTTTATAGAGTTT+GGG - chr4_3:46945322-46945341 None:intergenic 45.0%
CGATGAAGAGAGAGAAAGAG+AGG + chr4_3:46945511-46945530 Msa0643710:intron 45.0%
TGAAGAGAGAGAAAGAGAGG+AGG + chr4_3:46945514-46945533 Msa0643710:intron 45.0%
!! CATTTTAAGGGGACCATGAG+TGG + chr4_3:46945676-46945695 Msa0643710:intron 45.0%
TTTGCATGGTAGAGTCTTGC+AGG + chr4_3:46946269-46946288 Msa0643710:intron 45.0%
ACAGTAGGCCACGTATTAGA+GGG + chr4_3:46946544-46946563 Msa0643710:CDS 45.0%
GCAAATCTCCCTCTAATACG+TGG - chr4_3:46946555-46946574 None:intergenic 45.0%
GACTCGTCATGAGCAAGATT+TGG - chr4_3:46946702-46946721 None:intergenic 45.0%
!! TTATTCATATTTATTTAAAT+AGG - chr4_3:46933735-46933754 None:intergenic 5.0%
!!! ATATTATTTATATGATTTTT+GGG - chr4_3:46935634-46935653 None:intergenic 5.0%
!! TAAATAAAAAAAATTATATG+TGG + chr4_3:46936326-46936345 Msa0643710:intron 5.0%
!! TTAATAAAGAATATAAAATA+TGG - chr4_3:46937605-46937624 None:intergenic 5.0%
! TGGTTGTGCTGCTGCATATC+AGG - chr4_3:46933091-46933110 None:intergenic 50.0%
CCACCTTGGTGAATACGAGT+CGG + chr4_3:46933108-46933127 Msa0643710:CDS 50.0%
CGGATGTCTAGCTGATGAGA+TGG - chr4_3:46933435-46933454 None:intergenic 50.0%
! TAGAGGCGTAGATTCGAACC+CGG + chr4_3:46933459-46933478 Msa0643710:intron 50.0%
! GGCCTTCTGAAAGCCTGATA+CGG - chr4_3:46934403-46934422 None:intergenic 50.0%
AGGTCTTGCAAAGCCTAGCT+CGG + chr4_3:46934502-46934521 Msa0643710:intron 50.0%
TTTAGGGGTGGGAATAGGCT+AGG - chr4_3:46934528-46934547 None:intergenic 50.0%
CAAACCCTTGGATTTAGGGG+TGG - chr4_3:46934540-46934559 None:intergenic 50.0%
CACCCCTAAATCCAAGGGTT+TGG + chr4_3:46934538-46934557 Msa0643710:intron 50.0%
ATCTGAGGAGTCCAAACCCT+TGG - chr4_3:46934552-46934571 None:intergenic 50.0%
!! CCTCACAAGCCAGTTTTGTG+GGG - chr4_3:46935362-46935381 None:intergenic 50.0%
! CACCTCACAAGCCAGTTTTG+TGG - chr4_3:46935364-46935383 None:intergenic 50.0%
!! CAAAACTGGCTTGTGAGGTG+AGG + chr4_3:46935364-46935383 Msa0643710:intron 50.0%
GCGGATGCTTGTGCATGAAA+GGG + chr4_3:46935937-46935956 Msa0643710:intron 50.0%
CGGATGCTTGTGCATGAAAG+GGG + chr4_3:46935938-46935957 Msa0643710:intron 50.0%
GTGCATGAAAGGGGTAGCTA+TGG + chr4_3:46935947-46935966 Msa0643710:intron 50.0%
! AAAAAACCCGTGCTGACGCA+CGG + chr4_3:46936693-46936712 Msa0643710:intron 50.0%
GAAGGTGACATATCCATCCG+TGG + chr4_3:46938726-46938745 Msa0643710:intron 50.0%
GTGGTTACTTAAGGTTGGGG+AGG - chr4_3:46939348-46939367 Msa0643720:intron 50.0%
GGTCTGTAAGTCTGTGTGGT+AGG + chr4_3:46940817-46940836 Msa0643710:intron 50.0%
! GAAAGTGGTCTTGAGGTAGC+AGG + chr4_3:46941305-46941324 Msa0643710:intron 50.0%
!! TCGAAATAGGTTGGTAGGGC+AGG + chr4_3:46942064-46942083 Msa0643710:intron 50.0%
CAGCCACGTCTCCTACTTAA+GGG - chr4_3:46944195-46944214 None:intergenic 50.0%
TCAGCCACGTCTCCTACTTA+AGG - chr4_3:46944196-46944215 None:intergenic 50.0%
CCATAACTTAGAGGTCTCGC+CGG - chr4_3:46944430-46944449 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+AGG + chr4_3:46944722-46944741 Msa0643710:intron 50.0%
TTTGGAGGGGAAAGGAAGGA+AGG + chr4_3:46944730-46944749 Msa0643710:intron 50.0%
GGAAGGAAGGAAGGACTTTG+GGG + chr4_3:46944743-46944762 Msa0643710:intron 50.0%
GAAGGAAGGAAGGACTTTGG+GGG + chr4_3:46944744-46944763 Msa0643710:intron 50.0%
! CACTTTGAGAGGAGTATGGG+TGG - chr4_3:46944814-46944833 None:intergenic 50.0%
TGAACAGAGAAGACAGAGGG+AGG - chr4_3:46944982-46945001 None:intergenic 50.0%
GGGATGAACAGAGAAGACAG+AGG - chr4_3:46944986-46945005 None:intergenic 50.0%
! TGGGTTAAATGGAGGGGTGT+GGG - chr4_3:46945050-46945069 None:intergenic 50.0%
! ATGGGTTAAATGGAGGGGTG+TGG - chr4_3:46945051-46945070 None:intergenic 50.0%
GGCCACGCGTTTATAGAGTT+TGG - chr4_3:46945323-46945342 None:intergenic 50.0%
GGAAGACATTGGCAGACAGT+AGG + chr4_3:46946529-46946548 Msa0643710:CDS 50.0%
GACAGTAGGCCACGTATTAG+AGG + chr4_3:46946543-46946562 Msa0643710:CDS 50.0%
ATGCAGCAGCACAACCACCT+TGG + chr4_3:46933094-46933113 Msa0643710:CDS 55.0%
! CCGACTCGTATTCACCAAGG+TGG - chr4_3:46933111-46933130 None:intergenic 55.0%
!! GGACCGACTCGTATTCACCA+AGG - chr4_3:46933114-46933133 None:intergenic 55.0%
CACCACCAGAGTTGAGCTGT+GGG - chr4_3:46933135-46933154 None:intergenic 55.0%
AGCGGGTGCACTAGCTACTT+GGG + chr4_3:46933184-46933203 Msa0643710:intron 55.0%
CTCCTCTGCATCAATCGGTC+CGG - chr4_3:46933214-46933233 None:intergenic 55.0%
GTAGAAAAAGGGCGGTGGTG+TGG - chr4_3:46933271-46933290 None:intergenic 55.0%
GTGCGGCGAGTTTACAGTAC+TGG + chr4_3:46933328-46933347 Msa0643710:CDS 55.0%
! AGAGGCGTAGATTCGAACCC+GGG + chr4_3:46933460-46933479 Msa0643710:intron 55.0%
AGTAGGGATGGGAATAGGCC+AGG + chr4_3:46933562-46933581 Msa0643710:intron 55.0%
GCTAGGCCATAGGCAACTGT+AGG - chr4_3:46933592-46933611 None:intergenic 55.0%
ACAGGTTAGCAGGCCGTATC+AGG + chr4_3:46934387-46934406 Msa0643710:intron 55.0%
GGCCGTATCAGGCTTTCAGA+AGG + chr4_3:46934398-46934417 Msa0643710:intron 55.0%
CTTATGAAAAGCCGCACGCC+AGG + chr4_3:46934445-46934464 Msa0643710:intron 55.0%
CAAATTGGCAGGCCAGACTC+AGG + chr4_3:46934482-46934501 Msa0643710:intron 55.0%
GGCTTTGCAAGACCTGAGTC+TGG - chr4_3:46934497-46934516 None:intergenic 55.0%
!! CCCCACAAAACTGGCTTGTG+AGG + chr4_3:46935359-46935378 Msa0643710:intron 55.0%
GAGTGTGGACATCGGTCTCA+AGG + chr4_3:46935587-46935606 Msa0643710:intron 55.0%
GGCGGATGCTTGTGCATGAA+AGG + chr4_3:46935936-46935955 Msa0643710:intron 55.0%
TTCCTCTGGGCTGTAAGGAC+TGG - chr4_3:46936607-46936626 None:intergenic 55.0%
GCCCAGAGGAAAAGAAGGTG+AGG + chr4_3:46936616-46936635 Msa0643710:intron 55.0%
! AAAAACCCGTGCTGACGCAC+GGG + chr4_3:46936694-46936713 Msa0643710:intron 55.0%
ACTTAAGGTTGGGGAGGGCA+AGG - chr4_3:46939342-46939361 Msa0643720:intron 55.0%
GAGATGTGAAGCAGAGGTGG+AGG + chr4_3:46940014-46940033 Msa0643710:intron 55.0%
!! GGCTGGTCTGTAAGTCTGTG+TGG + chr4_3:46940813-46940832 Msa0643710:intron 55.0%
AGGAACTGGGAAAAGGCTGC+AGG - chr4_3:46942517-46942536 Msa0643720:CDS 55.0%
CCGGCGAGACCTCTAAGTTA+TGG + chr4_3:46944427-46944446 Msa0643710:intron 55.0%
CGAGTTTGGAGGGGAAAGGA+AGG + chr4_3:46944726-46944745 Msa0643710:intron 55.0%
GAGGGGAAAGGAAGGAAGGA+AGG + chr4_3:46944734-46944753 Msa0643710:intron 55.0%
! GTTAAATGGAGGGGTGTGGG+TGG - chr4_3:46945047-46945066 None:intergenic 55.0%
CTGCTGCATATCAGGCGTGG+TGG - chr4_3:46933083-46933102 None:intergenic 60.0%
! GTGCTGCTGCATATCAGGCG+TGG - chr4_3:46933086-46933105 None:intergenic 60.0%
TCGGTCCCACAGCTCAACTC+TGG + chr4_3:46933127-46933146 Msa0643710:CDS 60.0%
GTCCCACAGCTCAACTCTGG+TGG + chr4_3:46933130-46933149 Msa0643710:CDS 60.0%
CCACCACCAGAGTTGAGCTG+TGG - chr4_3:46933136-46933155 None:intergenic 60.0%
CCACAGCTCAACTCTGGTGG+TGG + chr4_3:46933133-46933152 Msa0643710:CDS 60.0%
!! CAGCTCAACTCTGGTGGTGG+TGG + chr4_3:46933136-46933155 Msa0643710:CDS 60.0%
!! CTCAACTCTGGTGGTGGTGG+TGG + chr4_3:46933139-46933158 Msa0643710:CDS 60.0%
!! AACTCTGGTGGTGGTGGTGG+TGG + chr4_3:46933142-46933161 Msa0643710:CDS 60.0%
CAGCGGGTGCACTAGCTACT+TGG + chr4_3:46933183-46933202 Msa0643710:intron 60.0%
GCGGGTGCACTAGCTACTTG+GGG + chr4_3:46933185-46933204 Msa0643710:intron 60.0%
CACTAGCTACTTGGGGTCGC+CGG + chr4_3:46933192-46933211 Msa0643710:intron 60.0%
GGCCATAGGCAACTGTAGGC+CGG - chr4_3:46933588-46933607 None:intergenic 60.0%
CCTGTCGTACGCTAGGCCAT+AGG - chr4_3:46933602-46933621 None:intergenic 60.0%
CCTATGGCCTAGCGTACGAC+AGG + chr4_3:46933599-46933618 Msa0643710:intron 60.0%
AAAAGCCGCACGCCAGGCTT+AGG + chr4_3:46934451-46934470 Msa0643710:intron 60.0%
GGAATAGGCTAGGCCGAGCT+AGG - chr4_3:46934518-46934537 None:intergenic 60.0%
AGCCAGTCCTTACAGCCCAG+AGG + chr4_3:46936602-46936621 Msa0643710:intron 60.0%
CGCCGGACCGATTGATGCAG+AGG + chr4_3:46933209-46933228 Msa0643710:CDS 65.0%
GGGATGGGAATAGGCCAGGC+CGG + chr4_3:46933566-46933585 Msa0643710:intron 65.0%
TAGGCAACTGTAGGCCGGCC+TGG - chr4_3:46933583-46933602 None:intergenic 65.0%
GGCCGGCCTACAGTTGCCTA+TGG + chr4_3:46933583-46933602 Msa0643710:intron 65.0%
GAAGGCCTAAGCCTGGCGTG+CGG - chr4_3:46934459-46934478 None:intergenic 65.0%
CATGCACAAGCATCCGCCCC+TGG - chr4_3:46935934-46935953 None:intergenic 65.0%
GGCCTAGCGTACGACAGGCC+AGG + chr4_3:46933604-46933623 Msa0643710:intron 70.0%
GGCCTGGCCTGTCGTACGCT+AGG - chr4_3:46933609-46933628 None:intergenic 70.0%
GGGTACCCGTGCGTCAGCAC+GGG - chr4_3:46936702-46936721 None:intergenic 70.0%
CGGGTACCCGTGCGTCAGCA+CGG - chr4_3:46936703-46936722 None:intergenic 70.0%
GCTGACGCACGGGTACCCGT+CGG + chr4_3:46936704-46936723 Msa0643710:intron 70.0%
CTGACGCACGGGTACCCGTC+GGG + chr4_3:46936705-46936724 Msa0643710:intron 70.0%
TGACGCACGGGTACCCGTCG+GGG + chr4_3:46936706-46936725 Msa0643710:intron 70.0%
! CGCACGGGTACCCGTCGGGG+TGG + chr4_3:46936709-46936728 Msa0643710:intron 80.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 46933052 46946725 46933052 ID=Msa0643710;Name=Msa0643710
chr4_3 mRNA 46933052 46946725 46933052 ID=Msa0643710-mRNA-1;Parent=Msa0643710;Name=Msa0643710-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0.33|1|0|0|3|0|170
chr4_3 exon 46933052 46933188 46933052 ID=Msa0643710-mRNA-1:exon:11036;Parent=Msa0643710-mRNA-1
chr4_3 exon 46933198 46933363 46933198 ID=Msa0643710-mRNA-1:exon:11037;Parent=Msa0643710-mRNA-1
chr4_3 exon 46946519 46946725 46946519 ID=Msa0643710-mRNA-1:exon:11038;Parent=Msa0643710-mRNA-1
chr4_3 CDS 46933052 46933188 46933052 ID=Msa0643710-mRNA-1:cds;Parent=Msa0643710-mRNA-1
chr4_3 CDS 46933198 46933363 46933198 ID=Msa0643710-mRNA-1:cds;Parent=Msa0643710-mRNA-1
chr4_3 CDS 46946519 46946725 46946519 ID=Msa0643710-mRNA-1:cds;Parent=Msa0643710-mRNA-1
Gene Sequence

>Msa0643710

ATGTATACAAACTTCAACATCACATTCTCCACCACGCCTGATATGCAGCAGCACAACCACCTTGGTGAATACGAGTCGGTCCCACAGCTCAACTCTGGTGGTGGTGGTGGTGGAAATTATAATAGCTGTAGCAGCGGCTACTTGGGGTCGCCGGACCGATTGATGCAGAGGAGCATTAGTAGCCACTCTCTGCAAAAGAATGATGTGCCACACCACCGCCCTTTTTCTACTTTGTTTGCTGAATTGCTTGATCAAGAAAATGGTGCGGTGCGGCGAGTTTACAGTACTGGTGATCTTGATCAGTATGTTTGTAGGAAGACATTGGCAGACAGTAGGCCACGTATTAGAGGGAGATTTGCTAAGAATGATGAAATTGTAATGAATCCACCAAATCAATGGAGCCATATTAATAATGATGGAGAGGAATTAGAAGATGAGGAAGAAGAGAATTGGGACAGTTTATTTGATACATTGGTTCCTACTCCAAATCTTGCTCATGACGAGTCTCCC
Protein sequence

>Msa0643710

MYTNFNITFSTTPDMQQHNHLGEYESVPQLNSGGGGGGNYNSCSSGYLGSPDRLMQRSISSHSLQKNDVPHHRPFSTLFAELLDQENGAVRRVYSTGDLDQYVCRKTLADSRPRIRGRFAKNDEIVMNPPNQWSHINNDGEELEDEEEENWDSLFDTLVPTPNLAHDESP