AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644920 MtrunA17_Chr4g0032331 94.505 455 23 2 1 454 1 454 0.0 877
Msa0644920 MtrunA17_Chr3g0112771 44.737 456 242 5 2 453 6 455 1.38e-138 405
Msa0644920 MtrunA17_Chr3g0112761 46.623 459 231 7 1 452 1 452 4.62e-132 389
Msa0644920 MtrunA17_Chr4g0050341 36.268 477 264 13 5 446 16 487 4.89e-89 280
Msa0644920 MtrunA17_Chr3g0092641 34.990 483 268 15 3 450 7 478 3.36e-84 266
Msa0644920 MtrunA17_Chr5g0426431 34.990 483 268 13 3 450 7 478 1.27e-83 265
Msa0644920 MtrunA17_Chr6g0454401 33.473 478 273 12 10 450 12 481 2.26e-79 254
Msa0644920 MtrunA17_Chr2g0278711 35.000 480 271 14 3 450 7 477 3.66e-79 253
Msa0644920 MtrunA17_Chr6g0454191 32.914 477 277 12 10 450 12 481 7.70e-79 253
Msa0644920 MtrunA17_Chr6g0454331 33.263 475 277 11 3 443 2 470 7.95e-79 253
Msa0644920 MtrunA17_Chr3g0118671 33.264 478 279 10 10 454 8 478 1.59e-78 252
Msa0644920 MtrunA17_Chr3g0118711 32.645 484 286 11 3 453 8 484 3.19e-78 251
Msa0644920 MtrunA17_Chr3g0118701 33.128 486 281 12 4 454 11 487 3.22e-78 251
Msa0644920 MtrunA17_Chr6g0454301 32.415 472 283 10 10 450 265 731 4.10e-78 257
Msa0644920 MtrunA17_Chr6g0454301 35.455 220 133 2 230 443 5 221 4.64e-44 164
Msa0644920 MtrunA17_Chr6g0454291 34.664 476 267 11 3 443 2 468 8.21e-77 247
Msa0644920 MtrunA17_Chr8g0359821 32.712 483 281 13 3 450 5 478 1.73e-76 246
Msa0644920 MtrunA17_Chr6g0453961 32.365 482 287 11 3 450 14 490 2.86e-76 246
Msa0644920 MtrunA17_Chr3g0078841 32.627 472 276 11 5 443 7 469 5.14e-76 245
Msa0644920 MtrunA17_Chr5g0412111 34.656 479 259 16 10 453 6 465 5.69e-75 242
Msa0644920 MtrunA17_Chr3g0118771 31.950 482 288 10 6 454 19 493 6.71e-75 243
Msa0644920 MtrunA17_Chr3g0118691 32.432 481 283 10 4 450 11 483 1.32e-74 242
Msa0644920 MtrunA17_Chr6g0454341 30.720 472 283 11 6 443 8 469 1.39e-74 241
Msa0644920 MtrunA17_Chr6g0454131 33.264 481 282 14 3 450 5 479 2.83e-74 241
Msa0644920 MtrunA17_Chr7g0217881 32.833 466 273 11 10 450 12 462 3.12e-74 240
Msa0644920 MtrunA17_Chr6g0453951 32.421 475 281 11 10 450 59 527 1.34e-73 240
Msa0644920 MtrunA17_Chr6g0454321 31.858 452 272 10 6 427 8 453 2.67e-73 243
Msa0644920 MtrunA17_Chr6g0454261 31.857 474 281 12 4 443 6 471 4.04e-73 238
Msa0644920 MtrunA17_Chr6g0454201 34.958 472 258 14 10 443 12 472 5.31e-73 238
Msa0644920 MtrunA17_Chr6g0454141 31.356 472 288 11 3 443 5 471 1.22e-72 236
Msa0644920 MtrunA17_Chr6g0452771 31.875 480 275 12 3 443 5 471 5.23e-72 235
Msa0644920 MtrunA17_Chr5g0412131 35.010 477 261 14 10 453 13 473 3.77e-71 233
Msa0644920 MtrunA17_Chr6g0454181 32.051 468 276 11 10 443 12 471 8.67e-71 232
Msa0644920 MtrunA17_Chr5g0412101 33.469 490 273 15 1 453 1 474 1.67e-70 231
Msa0644920 MtrunA17_Chr3g0118661 31.579 475 284 9 6 447 11 477 7.08e-70 229
Msa0644920 MtrunA17_Chr6g0454151 31.959 485 286 13 4 453 6 481 1.17e-69 229
Msa0644920 MtrunA17_Chr6g0454361 32.766 470 270 10 10 443 13 472 1.23e-69 229
Msa0644920 MtrunA17_Chr6g0454121 32.017 481 288 12 3 450 5 479 1.94e-69 228
Msa0644920 MtrunA17_Chr6g0454211 33.753 477 270 12 3 443 292 758 1.97e-69 235
Msa0644920 MtrunA17_Chr6g0454211 31.365 271 132 9 118 369 1 236 1.43e-29 122
Msa0644920 MtrunA17_Chr5g0423981 31.429 455 261 10 10 443 12 436 2.27e-69 227
Msa0644920 MtrunA17_Chr8g0336331 30.603 464 285 10 10 443 12 468 3.21e-69 228
Msa0644920 MtrunA17_Chr6g0454351 31.733 479 263 13 10 452 14 464 4.00e-66 219
Msa0644920 MtrunA17_Chr3g0118751 31.120 482 263 13 6 454 4 449 2.00e-64 214
Msa0644920 MtrunA17_Chr5g0414321 32.696 471 263 18 10 453 12 455 8.27e-61 205
Msa0644920 MtrunA17_Chr7g0250001 32.579 442 253 16 7 427 6 423 4.17e-60 203
Msa0644920 MtrunA17_Chr5g0414331 33.120 468 267 17 10 454 14 458 7.86e-60 202
Msa0644920 MtrunA17_Chr6g0464881 31.522 460 254 13 1 428 1 431 9.77e-58 197
Msa0644920 MtrunA17_Chr7g0249981 30.128 468 279 17 7 452 25 466 5.40e-57 196
Msa0644920 MtrunA17_Chr8g0377921 30.490 469 270 16 7 438 3 452 7.92e-56 192
Msa0644920 MtrunA17_Chr3g0122001 32.391 460 257 14 7 427 5 449 1.01e-55 199
Msa0644920 MtrunA17_Chr3g0122001 31.753 485 272 17 7 449 485 952 1.20e-54 196
Msa0644920 MtrunA17_Chr6g0454251 33.753 397 217 11 10 370 9 395 1.44e-55 189
Msa0644920 MtrunA17_Chr3g0118721 36.897 290 166 6 175 450 4 290 1.60e-55 186
Msa0644920 MtrunA17_Chr5g0426401 35.463 313 176 10 154 450 9 311 3.06e-55 186
Msa0644920 MtrunA17_Chr3g0121991 33.686 472 258 22 7 438 78 534 3.08e-55 192
Msa0644920 MtrunA17_Chr6g0464921 31.158 475 259 16 1 438 1 444 3.25e-55 190
Msa0644920 MtrunA17_Chr6g0454221 39.640 222 124 2 229 443 4 222 2.08e-54 184
Msa0644920 MtrunA17_Chr8g0361371 30.992 484 279 18 1 446 1 467 2.59e-54 188
Msa0644920 MtrunA17_Chr8g0377941 30.870 460 251 15 7 427 6 437 5.35e-54 187
Msa0644920 MtrunA17_Chr6g0454271 35.587 281 163 5 175 443 4 278 9.70e-54 181
Msa0644920 MtrunA17_Chr8g0365811 29.388 490 281 14 3 449 490 957 1.25e-53 193
Msa0644920 MtrunA17_Chr8g0365811 30.357 448 265 14 9 421 10 445 2.18e-51 186
Msa0644920 MtrunA17_Chr5g0401721 31.084 489 280 17 1 450 1 471 2.15e-53 186
Msa0644920 MtrunA17_Chr8g0355011 31.445 353 196 6 109 452 46 361 2.15e-53 183
Msa0644920 MtrunA17_Chr8g0380531 30.687 466 278 16 8 449 10 454 2.59e-53 185
Msa0644920 MtrunA17_Chr1g0207931 28.750 480 257 14 1 454 85 505 4.34e-53 186
Msa0644920 MtrunA17_Chr1g0207971 28.810 479 285 17 1 449 1 453 6.01e-53 184
Msa0644920 MtrunA17_Chr1g0207981 29.106 481 295 13 2 450 7 473 6.80e-53 184
Msa0644920 MtrunA17_Chr7g0232391 40.927 259 133 7 205 446 207 462 2.42e-52 182
Msa0644920 MtrunA17_Chr1g0207861 29.938 481 292 14 1 449 1 468 2.56e-52 183
Msa0644920 MtrunA17_Chr1g0161351 28.986 483 302 12 2 454 31 502 2.74e-52 183
Msa0644920 MtrunA17_Chr4g0053501 29.752 484 288 14 2 453 5 468 5.46e-52 182
Msa0644920 MtrunA17_Chr5g0431441 29.958 474 274 15 9 450 19 466 8.75e-52 181
Msa0644920 MtrunA17_Chr3g0098111 29.053 475 290 13 8 449 9 469 1.14e-51 181
Msa0644920 MtrunA17_Chr4g0044511 29.253 482 268 16 18 451 50 506 1.53e-51 181
Msa0644920 MtrunA17_Chr7g0218791 29.330 433 263 14 15 426 12 422 4.60e-51 179
Msa0644920 MtrunA17_Chr7g0249931 32.564 433 254 16 1 415 34 446 1.30e-50 178
Msa0644920 MtrunA17_Chr1g0207951 30.882 476 272 16 8 449 656 1108 3.10e-50 183
Msa0644920 MtrunA17_Chr1g0207951 29.310 464 287 16 9 449 125 570 4.78e-49 180
Msa0644920 MtrunA17_Chr6g0486251 30.561 481 279 17 1 446 1 461 4.30e-50 176
Msa0644920 MtrunA17_Chr6g0486201 30.561 481 279 17 1 446 1 461 4.30e-50 176
Msa0644920 MtrunA17_Chr6g0459311 30.316 475 288 16 1 446 8 468 8.33e-50 176
Msa0644920 MtrunA17_Chr7g0232411 30.786 471 258 16 28 446 8 462 9.88e-50 176
Msa0644920 MtrunA17_Chr6g0454171 33.131 329 175 9 125 443 8 301 1.59e-49 171
Msa0644920 MtrunA17_Chr8g0366391 28.911 505 283 21 1 453 1 481 4.43e-49 174
Msa0644920 MtrunA17_Chr2g0329111 30.591 474 283 15 6 444 4 466 8.17e-49 174
Msa0644920 MtrunA17_Chr4g0053321 28.717 491 272 14 8 453 26 483 1.02e-48 174
Msa0644920 MtrunA17_Chr7g0232331 29.247 465 274 14 28 446 8 463 3.18e-48 172
Msa0644920 MtrunA17_Chr8g0334831 30.645 496 273 24 1 446 1 475 3.24e-48 172
Msa0644920 MtrunA17_Chr7g0218831 30.140 428 252 13 8 415 6 406 4.23e-48 171
Msa0644920 MtrunA17_Chr8g0339631 35.150 367 192 12 109 443 110 462 4.34e-48 171
Msa0644920 MtrunA17_Chr8g0373301 31.237 477 280 16 2 446 3 463 4.71e-48 171
Msa0644920 MtrunA17_Chr7g0232341 29.424 469 268 14 28 446 8 463 6.02e-48 171
Msa0644920 MtrunA17_Chr7g0218811 28.043 460 290 14 8 450 15 450 1.09e-47 170
Msa0644920 MtrunA17_Chr7g0218821 28.539 445 270 15 8 427 5 426 1.53e-47 169
Msa0644920 MtrunA17_Chr7g0218841 29.880 415 251 12 8 409 6 393 1.57e-47 169
Msa0644920 MtrunA17_Chr8g0339451 32.316 393 234 9 76 442 70 456 2.92e-47 169
Msa0644920 MtrunA17_Chr1g0207831 27.651 481 284 16 8 449 8 463 5.18e-47 169
Msa0644920 MtrunA17_Chr5g0440421 30.237 506 286 17 2 452 3 496 5.92e-47 169
Msa0644920 MtrunA17_Chr8g0347281 30.042 476 258 19 1 428 1 449 7.36e-47 168
Msa0644920 MtrunA17_Chr1g0153451 30.159 441 250 12 52 446 32 460 8.39e-47 168
Msa0644920 MtrunA17_Chr6g0464841 30.088 452 271 17 1 428 1 431 9.10e-47 167
Msa0644920 MtrunA17_Chr6g0464861 29.556 450 275 16 1 428 1 430 1.05e-46 167
Msa0644920 MtrunA17_Chr8g0339601 35.738 305 160 9 152 436 27 315 2.44e-46 163
Msa0644920 MtrunA17_Chr8g0335161 32.487 394 230 12 81 445 76 462 2.54e-46 166
Msa0644920 MtrunA17_Chr4g0066221 28.163 490 292 15 1 446 4 477 2.91e-46 167
Msa0644920 MtrunA17_Chr8g0347271 29.844 449 269 14 9 428 19 450 3.27e-46 166
Msa0644920 MtrunA17_Chr6g0463851 28.921 491 289 18 1 446 4 479 4.34e-46 166
Msa0644920 MtrunA17_Chr7g0265151 28.485 495 298 17 1 450 1 484 4.39e-46 166
Msa0644920 MtrunA17_Chr6g0464871 29.490 451 275 16 1 428 13 443 5.06e-46 166
Msa0644920 MtrunA17_Chr5g0401851 29.000 500 297 17 1 454 1 488 7.89e-46 166
Msa0644920 MtrunA17_Chr4g0014061 27.731 476 290 15 17 454 18 477 1.16e-45 165
Msa0644920 MtrunA17_Chr8g0335141 39.768 259 131 7 205 445 213 464 1.32e-45 164
Msa0644920 MtrunA17_Chr4g0066201 29.522 481 270 19 8 446 18 471 2.16e-45 164
Msa0644920 MtrunA17_Chr6g0462531 29.747 474 281 19 10 447 5 462 2.64e-45 164
Msa0644920 MtrunA17_Chr6g0463861 29.167 480 280 17 7 447 13 471 2.95e-45 164
Msa0644920 MtrunA17_Chr4g0044521 28.184 479 274 18 18 453 19 470 9.38e-45 162
Msa0644920 MtrunA17_Chr8g0339461 34.133 375 188 15 109 443 110 465 1.16e-44 162
Msa0644920 MtrunA17_Chr6g0449931 29.691 485 263 19 1 442 1 450 1.22e-44 162
Msa0644920 MtrunA17_Chr4g0066261 29.615 493 267 22 7 446 13 478 2.19e-44 162
Msa0644920 MtrunA17_Chr5g0442561 28.958 480 297 18 6 450 3 473 2.42e-44 161
Msa0644920 MtrunA17_Chr7g0275511 30.599 451 268 16 9 428 16 452 5.39e-44 160
Msa0644920 MtrunA17_Chr7g0232401 30.411 365 231 9 97 442 100 460 2.66e-43 158
Msa0644920 MtrunA17_Chr6g0462541 31.627 332 201 8 112 427 118 439 4.27e-43 158
Msa0644920 MtrunA17_Chr5g0419771 27.615 478 295 14 18 452 46 515 6.09e-43 158
Msa0644920 MtrunA17_Chr1g0159551 27.682 466 279 17 15 449 21 459 6.91e-43 157
Msa0644920 MtrunA17_Chr1g0173121 28.118 473 283 18 9 449 15 462 9.11e-43 157
Msa0644920 MtrunA17_Chr4g0072771 27.527 465 292 13 9 451 26 467 1.33e-42 156
Msa0644920 MtrunA17_Chr8g0339441 43.689 206 97 4 256 442 217 422 1.39e-42 155
Msa0644920 MtrunA17_Chr5g0393591 25.751 466 273 11 9 449 18 435 1.50e-42 156
Msa0644920 MtrunA17_Chr5g0419761 27.696 473 281 17 1 426 1 459 1.91e-42 156
Msa0644920 MtrunA17_Chr7g0265141 28.074 488 292 18 1 441 1 476 2.30e-42 156
Msa0644920 MtrunA17_Chr4g0066151 27.778 468 280 21 18 446 28 476 2.54e-42 156
Msa0644920 MtrunA17_Chr5g0448551 28.859 447 269 15 9 432 8 428 3.02e-42 155
Msa0644920 MtrunA17_Chr4g0066131 28.025 471 281 20 18 449 23 474 4.05e-42 155
Msa0644920 MtrunA17_Chr4g0072761 27.273 396 265 8 53 443 67 444 4.67e-42 154
Msa0644920 MtrunA17_Chr8g0336731 31.921 354 208 10 118 446 142 487 5.46e-42 155
Msa0644920 MtrunA17_Chr8g0336691 28.070 456 277 12 34 445 927 1375 5.78e-42 159
Msa0644920 MtrunA17_Chr8g0336691 32.603 365 207 11 109 445 116 469 1.69e-40 155
Msa0644920 MtrunA17_Chr8g0336691 27.617 449 268 13 19 443 491 906 9.62e-37 144
Msa0644920 MtrunA17_Chr8g0334861 31.306 444 241 19 52 446 32 460 6.83e-42 154
Msa0644920 MtrunA17_Chr7g0243681 27.291 491 300 18 1 449 1 476 8.37e-42 155
Msa0644920 MtrunA17_Chr4g0066281 26.458 480 284 17 8 446 12 463 8.46e-42 154
Msa0644920 MtrunA17_Chr5g0431361 27.174 460 289 10 15 451 19 455 2.23e-41 153
Msa0644920 MtrunA17_Chr8g0370941 28.235 510 283 19 1 449 1 488 3.30e-41 153
Msa0644920 MtrunA17_Chr6g0462521 26.866 469 287 16 10 447 5 448 4.79e-41 152
Msa0644920 MtrunA17_Chr8g0336651 28.270 474 263 14 19 443 792 1237 7.81e-41 156
Msa0644920 MtrunA17_Chr8g0336651 32.012 328 198 8 121 428 119 441 6.00e-39 150
Msa0644920 MtrunA17_Chr8g0336651 33.333 264 139 8 191 445 535 770 1.52e-32 131
Msa0644920 MtrunA17_Chr5g0448521 27.143 490 286 17 8 451 5 469 8.18e-41 152
Msa0644920 MtrunA17_Chr7g0243951 26.931 479 276 17 1 426 1 458 1.18e-40 152
Msa0644920 MtrunA17_Chr7g0243931 26.772 508 286 18 1 449 7 487 1.47e-40 151
Msa0644920 MtrunA17_Chr6g0462551 29.714 350 225 8 112 447 117 459 3.80e-40 150
Msa0644920 MtrunA17_Chr7g0232311 32.951 349 196 12 124 446 124 460 4.33e-40 149
Msa0644920 MtrunA17_Chr6g0462571 29.310 348 219 9 117 447 119 456 5.43e-40 149
Msa0644920 MtrunA17_Chr7g0243631 26.908 498 300 16 1 449 1 483 7.43e-40 149
Msa0644920 MtrunA17_Chr5g0428081 28.659 492 286 17 1 446 4 476 8.29e-40 149
Msa0644920 MtrunA17_Chr8g0382021 30.707 368 215 13 82 430 121 467 8.33e-40 149
Msa0644920 MtrunA17_Chr7g0265041 27.010 485 288 18 9 443 12 480 9.13e-40 149
Msa0644920 MtrunA17_Chr8g0369341 29.792 480 288 19 10 454 8 473 1.08e-39 149
Msa0644920 MtrunA17_Chr5g0420801 29.314 481 292 19 3 454 2 463 1.49e-39 148
Msa0644920 MtrunA17_Chr8g0336741 28.731 449 259 15 18 428 23 448 1.78e-39 148
Msa0644920 MtrunA17_Chr5g0442541 27.536 483 293 17 6 450 3 466 2.04e-39 147
Msa0644920 MtrunA17_Chr7g0249961 37.198 207 111 4 232 427 37 235 2.09e-39 143
Msa0644920 MtrunA17_Chr7g0275681 28.421 475 285 17 17 450 21 481 2.13e-39 148
Msa0644920 MtrunA17_Chr6g0454371 39.752 161 94 1 283 443 5 162 3.92e-39 139
Msa0644920 MtrunA17_Chr8g0374901 28.660 485 278 20 7 446 14 475 6.71e-39 147
Msa0644920 MtrunA17_Chr5g0416741 26.483 472 304 14 19 454 24 488 6.93e-39 147
Msa0644920 MtrunA17_Chr4g0044501 26.884 491 307 16 1 452 1 478 8.75e-39 146
Msa0644920 MtrunA17_Chr2g0294931 28.512 477 274 18 18 446 21 478 1.52e-38 145
Msa0644920 MtrunA17_Chr5g0442581 28.030 396 241 12 88 450 93 477 1.60e-38 146
Msa0644920 MtrunA17_Chr1g0179901 26.016 492 290 17 18 454 26 498 1.65e-38 145
Msa0644920 MtrunA17_Chr2g0294921 29.140 477 273 18 18 447 170 628 4.64e-38 146
Msa0644920 MtrunA17_Chr4g0011051 27.044 477 265 18 9 426 10 462 6.48e-38 144
Msa0644920 MtrunA17_Chr8g0374941 27.564 468 265 19 7 426 478 919 6.57e-38 147
Msa0644920 MtrunA17_Chr8g0374941 26.556 482 286 20 7 445 13 469 1.97e-36 143
Msa0644920 MtrunA17_Chr8g0374941 28.041 485 283 19 7 446 951 1414 2.76e-36 142
Msa0644920 MtrunA17_Chr7g0243781 28.200 461 289 15 1 428 1 452 7.43e-38 144
Msa0644920 MtrunA17_Chr7g0243801 28.106 491 293 19 1 449 1 473 1.26e-37 143
Msa0644920 MtrunA17_Chr6g0463891 26.526 475 305 14 2 438 5 473 1.51e-37 143
Msa0644920 MtrunA17_Chr4g0044481 26.392 413 245 12 2 392 22 397 1.66e-37 142
Msa0644920 MtrunA17_Chr4g0066171 26.598 485 278 20 8 446 21 473 2.11e-37 142
Msa0644920 MtrunA17_Chr7g0243871 27.789 475 266 17 1 426 1 447 2.44e-37 142
Msa0644920 MtrunA17_Chr7g0243771 27.902 491 293 19 1 449 1 472 2.87e-37 142
Msa0644920 MtrunA17_Chr5g0403641 27.349 479 285 16 1 447 53 500 3.17e-37 142
Msa0644920 MtrunA17_Chr2g0302961 27.557 479 294 16 5 447 2 463 3.68e-37 141
Msa0644920 MtrunA17_Chr3g0079731 28.283 495 276 18 9 447 7 478 7.08e-37 141
Msa0644920 MtrunA17_Chr2g0294941 29.972 357 208 11 111 435 17 363 7.84e-37 139
Msa0644920 MtrunA17_Chr2g0302991 29.167 480 282 20 5 447 2 460 8.15e-37 140
Msa0644920 MtrunA17_Chr8g0374931 28.302 477 285 17 1 435 4 465 9.95e-37 140
Msa0644920 MtrunA17_Chr5g0442491 27.216 485 301 16 6 450 3 475 1.02e-36 140
Msa0644920 MtrunA17_Chr7g0265051 26.735 490 303 16 9 453 10 488 1.52e-36 140
Msa0644920 MtrunA17_Chr7g0265101 26.016 492 306 16 9 453 10 490 1.59e-36 140
Msa0644920 MtrunA17_Chr8g0334851 27.848 474 290 17 1 438 1 458 1.62e-36 140
Msa0644920 MtrunA17_Chr7g0265111 27.236 492 288 16 11 451 45 517 2.76e-36 140
Msa0644920 MtrunA17_Chr5g0442521 27.439 492 294 17 6 451 3 477 4.36e-36 139
Msa0644920 MtrunA17_Chr3g0106231 25.800 469 285 16 10 450 19 452 6.08e-36 138
Msa0644920 MtrunA17_Chr5g0442601 28.418 373 230 11 109 451 512 877 1.63e-35 140
Msa0644920 MtrunA17_Chr5g0442601 28.165 316 190 8 90 392 42 333 9.13e-29 120
Msa0644920 MtrunA17_Chr5g0429711 26.403 481 293 16 8 453 11 465 1.71e-35 137
Msa0644920 MtrunA17_Chr1g0153461 40.642 187 97 3 256 428 3 189 3.80e-35 130
Msa0644920 MtrunA17_Chr7g0235051 26.552 467 263 17 1 426 1 428 5.78e-35 135
Msa0644920 MtrunA17_Chr8g0374971 27.273 495 270 19 9 446 16 477 6.34e-35 135
Msa0644920 MtrunA17_Chr5g0442511 27.349 479 281 18 6 449 47 493 7.58e-35 135
Msa0644920 MtrunA17_Chr7g0243861 27.328 494 282 19 9 449 15 484 3.39e-34 134
Msa0644920 MtrunA17_Chr4g0042891 30.595 353 201 14 117 440 118 455 4.21e-34 133
Msa0644920 MtrunA17_Chr5g0410941 28.421 475 279 19 18 449 33 489 6.98e-34 133
Msa0644920 MtrunA17_Chr5g0431421 31.783 258 152 4 206 451 205 450 1.33e-33 131
Msa0644920 MtrunA17_Chr5g0431401 31.395 258 153 4 206 451 205 450 1.48e-33 131
Msa0644920 MtrunA17_Chr8g0336261 40.769 130 74 1 283 412 5 131 1.57e-33 123
Msa0644920 MtrunA17_Chr8g0350881 27.651 481 288 17 10 446 13 477 2.79e-33 131
Msa0644920 MtrunA17_Chr4g0042931 28.700 446 259 16 18 427 17 439 5.61e-33 130
Msa0644920 MtrunA17_Chr4g0060511 27.331 472 268 18 9 426 12 462 5.79e-33 130
Msa0644920 MtrunA17_Chr5g0431371 30.175 285 174 5 169 440 166 438 7.54e-33 129
Msa0644920 MtrunA17_Chr5g0432731 30.798 263 147 9 206 450 52 297 8.70e-33 125
Msa0644920 MtrunA17_Chr7g0218311 28.732 355 220 11 111 438 124 472 1.66e-32 129
Msa0644920 MtrunA17_Chr7g0243711 36.574 216 118 7 250 449 101 313 1.99e-32 125
Msa0644920 MtrunA17_Chr7g0232351 39.205 176 92 5 205 369 207 378 2.97e-32 126
Msa0644920 MtrunA17_Chr5g0429681 26.210 496 292 22 2 453 38 503 3.31e-32 128
Msa0644920 MtrunA17_Chr7g0243851 32.463 268 155 8 205 449 175 439 3.33e-32 127
Msa0644920 MtrunA17_Chr7g0241781 27.313 454 262 20 1 431 1 409 5.00e-32 126
Msa0644920 MtrunA17_Chr7g0243761 26.932 427 260 16 1 392 1 410 1.45e-31 125
Msa0644920 MtrunA17_Chr3g0106251 27.273 286 187 4 167 443 12 285 1.15e-30 120
Msa0644920 MtrunA17_Chr7g0241801 26.535 456 263 18 1 431 1 409 3.91e-30 121
Msa0644920 MtrunA17_Chr5g0416821 25.314 478 309 17 8 452 14 476 4.30e-30 122
Msa0644920 MtrunA17_Chr5g0409591 29.831 295 169 7 184 449 196 481 6.84e-30 121
Msa0644920 MtrunA17_Chr7g0243611 33.333 210 129 5 191 392 65 271 1.16e-29 117
Msa0644920 MtrunA17_Chr1g0165701 27.249 378 226 14 112 454 125 488 1.70e-29 120
Msa0644920 MtrunA17_Chr1g0207881 25.551 454 241 15 1 438 1 373 2.56e-29 118
Msa0644920 MtrunA17_Chr8g0355221 26.596 376 234 11 112 454 125 491 4.69e-29 119
Msa0644920 MtrunA17_Chr6g0466831 24.829 439 273 14 18 426 28 439 1.02e-28 117
Msa0644920 MtrunA17_Chr7g0243911 38.220 191 100 6 252 426 17 205 1.80e-28 112
Msa0644920 MtrunA17_Chr6g0454231 29.437 231 115 5 205 429 7 195 2.85e-28 116
Msa0644920 MtrunA17_Chr6g0454231 30.688 189 112 4 10 180 252 439 1.15e-16 82.0
Msa0644920 MtrunA17_Chr6g0466841 24.545 440 273 15 18 426 28 439 2.85e-28 116
Msa0644920 MtrunA17_Chr7g0243811 34.574 188 117 4 205 390 190 373 1.45e-27 113
Msa0644920 MtrunA17_Chr4g0069611 25.112 446 263 17 18 426 25 436 1.48e-27 114
Msa0644920 MtrunA17_Chr8g0361411 27.311 476 292 18 1 447 1 451 1.62e-27 114
Msa0644920 MtrunA17_Chr2g0307961 27.743 483 265 19 7 440 11 458 2.66e-27 114
Msa0644920 MtrunA17_Chr5g0431431 27.068 266 163 6 169 424 116 360 1.01e-26 110
Msa0644920 MtrunA17_Chr7g0231631 30.204 245 155 7 205 438 9 248 3.83e-26 107
Msa0644920 MtrunA17_Chr4g0039881 25.968 439 270 16 18 427 2 414 3.14e-25 107
Msa0644920 MtrunA17_Chr8g0367221 25.110 454 265 17 18 427 1298 1720 3.15e-25 109
Msa0644920 MtrunA17_Chr8g0367221 25.111 450 270 17 18 427 808 1230 7.57e-24 105
Msa0644920 MtrunA17_Chr8g0367221 24.829 439 284 16 18 427 22 443 1.75e-22 101
Msa0644920 MtrunA17_Chr2g0302851 26.503 449 281 14 9 431 17 442 6.74e-25 106
Msa0644920 MtrunA17_Chr2g0278721 26.802 444 263 17 18 426 25 441 1.26e-24 107
Msa0644920 MtrunA17_Chr2g0278721 24.891 458 263 15 18 426 527 952 6.28e-23 102
Msa0644920 MtrunA17_Chr3g0079711 38.043 184 95 6 283 447 3 186 4.50e-24 99.0
Msa0644920 MtrunA17_Chr6g0482061 29.583 240 142 8 205 426 224 454 9.00e-24 103
Msa0644920 MtrunA17_Chr2g0278741 26.959 434 275 16 18 426 107 523 1.20e-23 103
Msa0644920 MtrunA17_Chr6g0464091 26.879 439 271 19 18 426 28 446 1.60e-22 99.8
Msa0644920 MtrunA17_Chr8g0337381 45.378 119 55 4 334 445 6 121 2.41e-22 92.4
Msa0644920 MtrunA17_Chr7g0250021 29.938 324 187 14 1 303 6 310 2.72e-22 97.4
Msa0644920 MtrunA17_Chr6g0453981 31.884 207 121 5 118 305 1 206 2.75e-22 95.1
Msa0644920 MtrunA17_Chr4g0066141 36.970 165 86 6 305 452 191 354 4.98e-22 97.1
Msa0644920 MtrunA17_Chr8g0336321 29.694 229 144 5 214 431 223 445 1.48e-21 97.1
Msa0644920 MtrunA17_Chr8g0336251 29.694 229 144 5 214 431 223 445 1.50e-21 97.1
Msa0644920 MtrunA17_Chr3g0092031 33.714 175 104 5 258 426 5 173 2.35e-21 91.7
Msa0644920 MtrunA17_Chr4g0029131 25.113 442 269 16 18 427 22 433 5.16e-21 96.3
Msa0644920 MtrunA17_Chr5g0426411 35.429 175 94 6 2 163 6 174 4.20e-20 87.4
Msa0644920 MtrunA17_Chr5g0427571 29.075 227 140 5 214 425 53 273 1.45e-19 89.0
Msa0644920 MtrunA17_Chr8g0357361 28.646 192 128 4 205 392 63 249 2.42e-19 87.8
Msa0644920 MtrunA17_Chr6g0453941 27.097 310 153 11 10 307 13 261 7.16e-18 83.6
Msa0644920 MtrunA17_Chr1g0196851 23.095 433 271 13 18 417 59 462 1.21e-17 85.1
Msa0644920 MtrunA17_Chr4g0040691 26.087 414 245 16 18 402 18 399 2.11e-17 84.3
Msa0644920 MtrunA17_Chr4g0040711 24.494 445 247 19 18 408 18 427 4.99e-17 83.2
Msa0644920 MtrunA17_Chr4g0029151 24.609 447 265 14 18 427 30 441 1.47e-16 81.6
Msa0644920 MtrunA17_Chr2g0283041 26.364 220 146 7 205 418 211 420 2.73e-16 80.9
Msa0644920 MtrunA17_Chr6g0454391 45.161 62 34 0 346 407 13 74 2.92e-14 69.3
Msa0644920 MtrunA17_Chr6g0454281 33.333 168 93 4 10 162 12 175 1.12e-13 70.1
Msa0644920 MtrunA17_Chr7g0243731 42.029 69 39 1 326 393 4 72 3.00e-11 59.3
Msa0644920 MtrunA17_Chr5g0442501 23.323 313 213 10 6 303 3 303 3.42e-11 64.3
Msa0644920 MtrunA17_Chr6g0454111 29.480 173 99 7 145 299 16 183 3.87e-11 62.0
Msa0644920 MtrunA17_Chr5g0427561 32.895 76 51 0 368 443 1 76 6.73e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644920 AT3G46670.1 44.396 455 237 8 2 449 3 448 1.97e-127 377
Msa0644920 AT3G46660.1 45.295 457 232 9 2 449 8 455 2.06e-124 370
Msa0644920 AT5G59590.1 43.805 452 239 9 2 446 3 446 2.79e-122 364
Msa0644920 AT3G11340.1 44.420 457 237 10 1 451 1 446 7.50e-120 357
Msa0644920 AT5G59580.1 42.358 458 249 8 2 453 3 451 9.69e-120 357
Msa0644920 AT3G46680.1 43.363 452 237 10 4 446 5 446 1.33e-117 352
Msa0644920 AT5G05870.1 43.202 456 250 7 1 449 1 454 1.98e-117 352
Msa0644920 AT5G05880.1 42.418 455 253 5 1 451 1 450 2.07e-117 351
Msa0644920 AT2G26480.1 43.326 457 238 10 3 450 2 446 3.67e-117 351
Msa0644920 AT3G46700.1 42.257 452 239 9 6 449 7 444 6.77e-117 350
Msa0644920 AT5G38010.1 43.267 453 245 8 4 449 6 453 9.56e-116 347
Msa0644920 AT3G46650.1 41.686 439 227 8 4 438 6 419 3.29e-114 343
Msa0644920 AT5G38040.1 44.292 438 228 8 17 447 19 447 6.34e-114 342
Msa0644920 AT3G46690.1 43.016 451 242 9 6 449 7 449 1.28e-113 342
Msa0644920 AT3G46720.1 43.556 450 232 9 6 449 7 440 8.54e-113 339
Msa0644920 AT5G05860.1 41.850 454 251 8 2 450 3 448 9.28e-113 339
Msa0644920 AT5G05890.1 41.266 458 258 7 1 451 1 454 3.17e-109 330
Msa0644920 AT5G05900.1 41.138 457 251 7 1 449 1 447 3.34e-107 325
Msa0644920 AT3G55700.1 38.330 467 261 10 1 453 1 454 1.04e-105 322
Msa0644920 AT3G55710.1 40.295 474 246 14 1 453 1 458 7.70e-100 307
Msa0644920 AT1G22360.1 34.211 456 257 10 6 428 8 453 2.32e-85 270
Msa0644920 AT1G22400.1 33.480 454 258 9 6 425 11 454 2.90e-83 265
Msa0644920 AT1G22380.1 32.298 483 281 11 4 450 9 481 2.34e-82 262
Msa0644920 AT1G22340.1 33.131 495 281 14 1 454 1 486 1.39e-79 255
Msa0644920 AT1G22360.2 32.895 456 251 11 6 428 8 441 2.82e-77 249
Msa0644920 AT5G37950.1 40.625 352 195 7 23 369 1 343 3.38e-77 244
Msa0644920 AT1G22370.2 34.979 466 258 13 6 438 11 464 7.38e-76 245
Msa0644920 AT5G37950.2 39.828 349 196 6 23 369 1 337 3.92e-75 239
Msa0644920 AT1G78270.1 33.264 484 278 15 3 451 9 482 7.51e-72 235
Msa0644920 AT1G05680.1 30.952 462 276 16 9 446 7 449 1.80e-55 191
Msa0644920 AT3G50740.1 31.992 472 270 13 5 441 4 459 7.82e-55 190
Msa0644920 AT2G36770.1 29.026 503 290 19 1 450 1 489 1.73e-54 189
Msa0644920 AT4G15500.1 29.979 487 284 15 1 453 3 466 4.68e-54 188
Msa0644920 AT2G28080.1 29.979 467 272 15 12 445 22 466 7.78e-54 187
Msa0644920 AT2G36780.1 29.167 504 292 16 1 452 1 491 3.97e-53 186
Msa0644920 AT1G05675.1 30.736 462 277 16 9 446 7 449 4.37e-52 182
Msa0644920 AT2G36970.1 30.786 471 285 16 9 449 11 470 1.24e-51 182
Msa0644920 AT4G15550.1 29.707 478 275 15 9 446 14 470 4.31e-51 180
Msa0644920 AT2G31790.1 29.025 472 290 15 1 446 1 453 5.44e-51 179
Msa0644920 AT2G36750.1 29.600 500 290 17 1 452 1 486 5.60e-51 180
Msa0644920 AT5G17050.1 28.025 471 299 15 3 452 8 459 1.47e-50 178
Msa0644920 AT4G15480.1 28.017 464 287 16 9 440 20 468 1.50e-49 176
Msa0644920 AT2G23250.1 28.478 460 283 13 11 449 1 435 2.46e-49 174
Msa0644920 AT4G15490.1 28.145 469 293 13 5 443 4 458 2.61e-49 175
Msa0644920 AT1G22370.1 38.889 288 151 9 169 438 14 294 3.36e-49 170
Msa0644920 AT4G01070.1 29.574 470 292 15 2 443 3 461 5.65e-49 174
Msa0644920 AT4G14090.1 28.632 468 287 14 3 446 8 452 8.41e-49 173
Msa0644920 AT5G26310.1 30.126 478 263 16 5 438 4 454 1.30e-48 173
Msa0644920 AT2G36760.1 30.435 460 267 18 9 426 15 463 3.52e-48 172
Msa0644920 AT5G17040.1 28.378 444 275 13 25 452 26 442 5.05e-48 171
Msa0644920 AT3G21560.1 27.312 465 290 15 9 440 13 462 5.53e-48 172
Msa0644920 AT5G66690.1 30.835 467 274 15 5 438 4 454 1.14e-47 171
Msa0644920 AT3G02100.1 27.579 475 291 15 6 451 11 461 5.64e-47 169
Msa0644920 AT1G05560.1 29.741 464 285 15 9 449 6 451 7.01e-47 168
Msa0644920 AT2G43820.1 29.039 458 276 15 6 440 5 436 7.42e-47 168
Msa0644920 AT2G23260.1 28.571 476 285 18 2 449 5 453 9.63e-47 168
Msa0644920 AT1G24100.1 29.724 471 283 14 4 447 7 456 1.37e-46 167
Msa0644920 AT1G05560.2 29.741 464 285 15 9 449 56 501 2.01e-46 168
Msa0644920 AT2G30140.1 28.511 470 292 11 4 453 10 455 4.41e-46 166
Msa0644920 AT2G30140.2 28.571 469 292 11 4 453 10 454 9.65e-46 165
Msa0644920 AT2G31750.1 27.669 459 269 13 1 426 1 429 1.02e-45 165
Msa0644920 AT2G31750.2 28.194 454 273 14 1 426 1 429 1.41e-45 165
Msa0644920 AT2G43840.1 30.023 443 260 19 4 423 3 418 6.48e-45 162
Msa0644920 AT2G36800.1 29.691 485 277 19 17 452 21 490 1.02e-44 163
Msa0644920 AT2G43840.2 30.023 443 260 19 4 423 3 418 2.75e-44 161
Msa0644920 AT3G53160.1 28.542 480 281 17 9 441 9 473 4.74e-44 161
Msa0644920 AT5G17030.1 29.041 365 235 10 99 450 103 456 8.91e-44 160
Msa0644920 AT2G30150.2 27.824 478 282 17 5 452 11 455 2.62e-43 158
Msa0644920 AT2G30150.1 28.205 468 274 16 15 452 4 439 2.88e-43 158
Msa0644920 AT5G12890.1 29.289 478 291 16 2 444 3 468 3.03e-43 159
Msa0644920 AT1G01420.1 29.605 456 277 17 2 428 3 443 4.86e-43 158
Msa0644920 AT1G01420.2 29.605 456 277 17 2 428 6 446 5.38e-43 158
Msa0644920 AT1G05530.1 28.326 466 294 14 9 450 6 455 7.90e-43 157
Msa0644920 AT2G36790.1 29.485 485 277 20 17 452 22 490 1.48e-42 157
Msa0644920 AT5G03490.1 28.953 487 266 16 2 447 13 460 2.22e-42 156
Msa0644920 AT3G16520.3 30.601 366 206 17 109 447 113 457 2.42e-42 156
Msa0644920 AT3G16520.1 29.888 358 205 16 109 441 113 449 5.53e-42 155
Msa0644920 AT4G34131.1 25.451 499 306 14 1 451 1 481 1.65e-41 154
Msa0644920 AT5G17040.2 34.000 250 153 5 206 452 100 340 6.88e-41 149
Msa0644920 AT3G16520.2 30.199 351 199 16 109 434 113 442 9.55e-41 151
Msa0644920 AT1G30530.1 28.371 356 234 10 106 452 110 453 1.08e-40 151
Msa0644920 AT1G10400.1 29.322 457 261 18 1 421 1 431 8.22e-40 149
Msa0644920 AT2G15490.3 27.044 477 285 17 17 447 16 475 1.73e-39 149
Msa0644920 AT2G29740.1 27.696 473 280 16 1 431 1 453 1.82e-39 148
Msa0644920 AT1G51210.1 29.909 438 249 16 15 426 27 432 2.46e-39 147
Msa0644920 AT3G22250.1 27.815 453 277 15 1 421 1 435 7.21e-39 146
Msa0644920 AT4G34138.1 26.638 458 293 12 17 440 20 468 8.46e-39 147
Msa0644920 AT2G15480.1 25.304 494 306 17 1 447 1 478 2.38e-38 145
Msa0644920 AT2G15490.1 26.349 482 285 17 17 447 16 478 2.88e-38 145
Msa0644920 AT2G29730.1 27.463 477 298 18 9 453 6 466 3.23e-38 145
Msa0644920 AT3G53150.1 28.537 417 257 12 6 392 20 425 1.23e-37 144
Msa0644920 AT4G34135.1 25.828 453 286 15 1 413 1 443 1.73e-37 143
Msa0644920 AT2G15480.2 25.595 504 302 19 1 447 1 488 1.94e-37 143
Msa0644920 AT2G18570.1 28.982 452 276 16 7 427 5 442 2.16e-37 142
Msa0644920 AT3G21790.1 27.792 403 231 11 89 449 94 478 4.10e-37 142
Msa0644920 AT4G36770.1 34.940 249 132 7 201 427 199 439 6.39e-37 141
Msa0644920 AT2G29750.1 26.875 480 290 15 1 438 1 461 1.70e-36 140
Msa0644920 AT4G15280.1 27.443 481 299 15 9 450 5 474 2.79e-36 139
Msa0644920 AT3G21760.1 27.846 492 293 16 9 453 5 481 3.89e-36 139
Msa0644920 AT4G15280.2 29.867 375 220 12 108 450 143 506 4.18e-36 139
Msa0644920 AT1G07250.1 30.312 353 187 11 108 426 120 447 6.26e-36 139
Msa0644920 AT3G21780.1 28.178 472 296 15 9 447 5 466 1.67e-35 137
Msa0644920 AT3G21800.1 26.667 495 294 19 6 449 3 479 3.93e-35 136
Msa0644920 AT4G15260.1 29.348 368 212 11 117 450 2 355 6.60e-35 133
Msa0644920 AT1G01390.1 28.450 471 268 17 2 430 3 446 6.98e-35 135
Msa0644920 AT1G01390.2 28.450 471 268 17 2 430 20 463 7.45e-35 136
Msa0644920 AT5G14860.1 27.856 499 282 23 1 447 1 473 2.70e-34 134
Msa0644920 AT5G49690.1 28.217 443 262 13 18 431 20 435 6.93e-34 132
Msa0644920 AT2G18560.1 33.469 245 132 7 205 427 117 352 1.92e-33 130
Msa0644920 AT1G07260.1 29.330 433 232 17 47 446 71 462 5.12e-33 130
Msa0644920 AT1G73880.1 26.722 479 295 20 10 454 15 471 6.63e-33 130
Msa0644920 AT2G29710.1 27.004 474 302 15 8 451 5 464 1.32e-32 129
Msa0644920 AT3G21750.1 25.911 494 285 17 9 450 5 469 1.31e-31 126
Msa0644920 AT5G65550.1 25.561 446 276 13 18 430 19 441 3.41e-31 125
Msa0644920 AT2G16890.2 26.518 494 287 19 1 447 1 465 1.29e-30 124
Msa0644920 AT2G16890.3 27.506 429 245 17 1 392 1 400 1.67e-28 117
Msa0644920 AT1G07240.1 27.248 367 233 12 109 451 121 477 3.54e-28 117
Msa0644920 AT4G27570.1 25.000 428 269 16 18 426 17 411 3.64e-21 95.9
Msa0644920 AT4G27560.1 24.711 433 278 16 18 435 17 416 2.05e-20 94.0
Msa0644920 AT1G64910.1 24.566 403 250 14 18 402 16 382 2.18e-20 93.6
Msa0644920 AT5G53990.1 23.951 405 250 11 18 402 16 382 2.09e-18 87.8
Msa0644920 AT5G54010.1 25.628 398 258 14 18 402 16 388 2.54e-18 87.4
Msa0644920 AT1G64920.1 24.490 441 268 15 18 435 16 414 2.55e-18 87.4
Msa0644920 AT2G22590.1 28.632 234 134 8 215 431 233 450 2.96e-18 87.4
Msa0644920 AT4G01070.2 26.524 328 216 12 2 316 3 318 1.05e-17 84.7
Msa0644920 AT3G29630.1 25.285 439 271 17 18 430 16 423 3.17e-17 84.0
Msa0644920 AT4G09500.2 23.326 433 278 13 18 427 16 417 8.42e-17 82.8
Msa0644920 AT1G06000.1 24.421 475 280 19 3 446 4 430 5.45e-15 77.0
Msa0644920 AT1G50580.1 23.853 436 279 17 18 430 16 421 1.02e-14 76.3
Msa0644920 AT4G34135.2 24.398 332 216 12 1 303 1 326 1.41e-14 75.1
Msa0644920 AT2G22930.1 23.272 434 285 14 18 431 16 421 2.24e-14 75.5
Msa0644920 AT3G29630.2 24.601 439 248 15 18 430 16 397 4.51e-14 74.3
Msa0644920 AT4G09500.1 22.864 433 255 13 18 427 16 392 2.00e-13 72.4
Msa0644920 AT5G54060.1 24.814 403 237 15 18 385 23 394 1.28e-12 70.1

Find 122 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTTGTCAACCTTATTT+TGG 0.142647 4_3:+49296947 Msa0644920:CDS
GTTGATTTGTCAAATTAAAA+AGG 0.172101 4_3:-49296388 None:intergenic
TTCTGTGTTATATGTAAGTT+TGG 0.192009 4_3:+49296643 Msa0644920:CDS
TCTTCATGTGATGCACTAAA+TGG 0.195276 4_3:+49297154 Msa0644920:CDS
ACAGAATTGAAGCATGAAAT+TGG 0.204111 4_3:+49297115 Msa0644920:CDS
CAAAATTCTTGGAAGTGATT+TGG 0.212817 4_3:-49295287 None:intergenic
TGGTAACAGAAATTTATTTA+AGG 0.218082 4_3:+49295005 None:intergenic
AGCAATATCTACAAAATTCT+TGG 0.228718 4_3:-49295298 None:intergenic
TGATTTCACAACAAAATTAA+AGG 0.233427 4_3:+49297208 Msa0644920:exon
ACCCTCTGATCTCCAAAATA+AGG 0.251562 4_3:-49296959 None:intergenic
ATGAAGCTGTTGGAGGGTTT+TGG 0.256108 4_3:+49296873 Msa0644920:CDS
TTTGTCCTTCATCGATTCTT+TGG 0.260446 4_3:+49295437 Msa0644920:CDS
GGTTAACTTTGTATAGCTTT+TGG 0.280771 4_3:-49296511 None:intergenic
AAAATTCTTGGAAGTGATTT+GGG 0.297761 4_3:-49295286 None:intergenic
AAATAAGGTTGACAAATAAT+TGG 0.298423 4_3:-49296944 None:intergenic
ACTAGTATTGTTAGCATCAT+TGG 0.305191 4_3:-49296564 None:intergenic
AACACTTTCAATAACACCTT+TGG 0.323814 4_3:+49296436 Msa0644920:CDS
GCTTGGTAGCTTTAGTTCCT+TGG 0.342541 4_3:-49295460 None:intergenic
GTTGGAGGTTTGTACTATAT+TGG 0.345038 4_3:-49295052 None:intergenic
CCATGTTTGGAAGGTGGGTT+TGG 0.350717 4_3:+49297000 Msa0644920:CDS
ACACCTACTTTAACATCTTC+CGG 0.354708 4_3:-49296797 None:intergenic
AATCGCAGCAAGTCCAGTTC+TGG 0.355643 4_3:-49296353 None:intergenic
GATTTCACAACAAAATTAAA+GGG 0.362096 4_3:+49297209 Msa0644920:exon
AAGGGACTTGGTGCCAGAAC+TGG 0.363055 4_3:+49296340 Msa0644920:CDS
CCTTGTAAGGTTAATTGAAT+AGG 0.366412 4_3:+49297247 Msa0644920:three_prime_UTR
GGCACCTCAAAGTGAAGTTT+TGG 0.366545 4_3:+49296847 Msa0644920:CDS
AAGGGTGGTTAGAAGACTTA+TGG 0.373991 4_3:+49297057 Msa0644920:CDS
AAGGATCAGGGGAATTGAAA+TGG 0.377470 4_3:-49295212 None:intergenic
ACAGCAGACAAAATTTCCTT+TGG 0.377724 4_3:+49296723 Msa0644920:CDS
CAAGGTTGTTGAGCCATGTT+TGG 0.393614 4_3:+49296987 Msa0644920:CDS
TTAGGATGATTAGAAGGATC+AGG 0.411557 4_3:-49295225 None:intergenic
TTGGTCAATACTTGCGGTAC+AGG 0.411578 4_3:-49295033 None:intergenic
TTTGGGAAGCATAGCTAGTT+GGG 0.418943 4_3:+49296661 Msa0644920:CDS
CCTATTCAATTAACCTTACA+AGG 0.424079 4_3:-49297247 None:intergenic
TAGAAATTAGGATGATTAGA+AGG 0.426359 4_3:-49295231 None:intergenic
AACTCAAACTAGGCACCGTT+TGG 0.426910 4_3:+49295092 Msa0644920:CDS
AAAATGATAATTGTATATCT+TGG 0.430200 4_3:+49296600 Msa0644920:CDS
CAGCAGACAAAATTTCCTTT+GGG 0.432619 4_3:+49296724 Msa0644920:CDS
ACACTTTCAATAACACCTTT+GGG 0.433983 4_3:+49296437 Msa0644920:CDS
AATCATGTGTAGAGGACCTA+TGG 0.435021 4_3:-49296540 None:intergenic
AGCGTGGTTAGAATCTTTGC+CGG 0.435867 4_3:+49296778 Msa0644920:CDS
GTTTGGGAAGCATAGCTAGT+TGG 0.438235 4_3:+49296660 Msa0644920:CDS
GAACACTTAAGTACCTTGTA+AGG 0.439819 4_3:+49297234 Msa0644920:three_prime_UTR
ATTGCTTGCATCATCTATGA+TGG 0.440072 4_3:+49295411 Msa0644920:CDS
TTGAGCCATGTTTGGAAGGT+GGG 0.440282 4_3:+49296995 Msa0644920:CDS
TGTGCCAAAACTTCACTTTG+AGG 0.449664 4_3:-49296851 None:intergenic
TTTGGAAGGTGGGTTTGGAA+TGG 0.450767 4_3:+49297005 Msa0644920:CDS
AGAGAGGCAGTGTTGTGAAA+TGG 0.452932 4_3:+49296825 Msa0644920:CDS
CAGAATTGAAGCATGAAATT+GGG 0.453228 4_3:+49297116 Msa0644920:CDS
GCCACCATCCTTCATTCAAA+AGG 0.455870 4_3:+49295165 Msa0644920:CDS
AGGATCAGGGGAATTGAAAT+GGG 0.464443 4_3:-49295211 None:intergenic
CTTCATCGATTCTTTGGCCA+AGG 0.471331 4_3:+49295443 Msa0644920:CDS
AATGGTGTAATGTAATAGAA+AGG 0.471709 4_3:+49297023 Msa0644920:CDS
TCTGTGTTATATGTAAGTTT+GGG 0.478228 4_3:+49296644 Msa0644920:CDS
CTAATATCACCACCTTTACA+AGG 0.481870 4_3:+49295117 Msa0644920:CDS
AGATTCAAAGTCAAGGGACT+TGG 0.486018 4_3:+49296328 Msa0644920:intron
AATTAGTAGCACTAGTGGTT+CGG 0.497388 4_3:-49295491 None:intergenic
GAGAGGCAGTGTTGTGAAAT+GGG 0.504330 4_3:+49296826 Msa0644920:CDS
TAGGATGATTAGAAGGATCA+GGG 0.514325 4_3:-49295224 None:intergenic
AAAGTGCGTATCTTCACTTA+AGG 0.517642 4_3:+49295335 Msa0644920:CDS
TGGTCAATACTTGCGGTACA+GGG 0.524461 4_3:-49295032 None:intergenic
TAGAAAGGGATGAGATTGAA+AGG 0.527792 4_3:+49297038 Msa0644920:CDS
AAACTAGCAAATGAAAATCA+TGG 0.529871 4_3:+49295381 Msa0644920:CDS
TTGCCGGAAGATGTTAAAGT+AGG 0.529974 4_3:+49296794 Msa0644920:CDS
CTTCATGTGATGCACTAAAT+GGG 0.537116 4_3:+49297155 Msa0644920:CDS
AAGGGATGAGATTGAAAGGG+TGG 0.538244 4_3:+49297042 Msa0644920:CDS
ATCATGTGTAGAGGACCTAT+GGG 0.538887 4_3:-49296539 None:intergenic
AGACTTATGGTGAATTCAGA+AGG 0.539135 4_3:+49297070 Msa0644920:CDS
TAACAGAAATTTATTTAAGG+AGG 0.540929 4_3:+49295008 None:intergenic
CCAAACCCACCTTCCAAACA+TGG 0.541153 4_3:-49297000 None:intergenic
GTTGAGCCATGTTTGGAAGG+TGG 0.541502 4_3:+49296994 Msa0644920:CDS
GGAGTTATGTGGCCTTGTAA+AGG 0.543909 4_3:-49295129 None:intergenic
TGGCACATGAAGCTGTTGGA+GGG 0.545267 4_3:+49296867 Msa0644920:CDS
TTGGCACATGAAGCTGTTGG+AGG 0.555816 4_3:+49296866 Msa0644920:CDS
ATGGGTGTGTGCTATGGTGA+TGG 0.557058 4_3:-49295193 None:intergenic
TTAGATAAACCATCGGAGAA+AGG 0.558570 4_3:-49295261 None:intergenic
TGAAACATCGTTGATTGACT+CGG 0.559017 4_3:-49296756 None:intergenic
TGAAATTGGGATAGCTGTGA+GGG 0.561224 4_3:+49297129 Msa0644920:CDS
AGAAAGGGATGAGATTGAAA+GGG 0.564711 4_3:+49297039 Msa0644920:CDS
GTAGAGGACCTATGGGGAAG+AGG 0.568003 4_3:-49296532 None:intergenic
GTTGTTGAGCCATGTTTGGA+AGG 0.575186 4_3:+49296991 Msa0644920:CDS
AAAGGTTACCTTCCATTGCA+AGG 0.576654 4_3:+49295549 Msa0644920:CDS
ATTGAAATGGGTGTGTGCTA+TGG 0.578704 4_3:-49295199 None:intergenic
AAAGTTAACCTCTTCCCCAT+AGG 0.583136 4_3:+49296524 Msa0644920:CDS
GAAACATCGTTGATTGACTC+GGG 0.585002 4_3:-49296755 None:intergenic
ATGGTGGCTAGTTGAAGCAT+AGG 0.588164 4_3:-49295150 None:intergenic
ATTTCACAACAAAATTAAAG+GGG 0.596257 4_3:+49297210 Msa0644920:exon
GACTTATGGTGAATTCAGAA+GGG 0.596627 4_3:+49297071 Msa0644920:CDS
AGTTGATGGAAACTCAAACT+AGG 0.597917 4_3:+49295082 Msa0644920:exon
CTGTGGTTGGAATTCTACAT+TGG 0.598732 4_3:+49296901 Msa0644920:CDS
TATGACAGATTCAAAGTCAA+GGG 0.598856 4_3:+49296322 Msa0644920:intron
GAGCTAACTGAAGTTGCTTG+TGG 0.601046 4_3:+49296692 Msa0644920:CDS
AGGTACTACCTTGCAATGGA+AGG 0.601838 4_3:-49295557 None:intergenic
GAGATCAGAGGGTAAATGCA+AGG 0.602462 4_3:+49296969 Msa0644920:CDS
ATGGTGTAATGTAATAGAAA+GGG 0.605575 4_3:+49297024 Msa0644920:CDS
GAGTAAATTAGTAGCACTAG+TGG 0.606313 4_3:-49295496 None:intergenic
ACTATATTGGTCAATACTTG+CGG 0.607081 4_3:-49295039 None:intergenic
GTTGAAGCATAGGAGTTATG+TGG 0.608795 4_3:-49295140 None:intergenic
AAAGTAGGTGTAGCTGAGAG+AGG 0.611957 4_3:+49296809 Msa0644920:CDS
TTTCACAACAAAATTAAAGG+GGG 0.615650 4_3:+49297211 Msa0644920:three_prime_UTR
GTATGACAGATTCAAAGTCA+AGG 0.617752 4_3:+49296321 Msa0644920:intron
GTGGTTCGGAAGACTATGCT+TGG 0.619939 4_3:-49295477 None:intergenic
CTTGGCCAAAGAATCGATGA+AGG 0.627855 4_3:-49295442 None:intergenic
AGTAAGGTACTACCTTGCAA+TGG 0.633328 4_3:-49295561 None:intergenic
TTGGGTATTAGATAAACCAT+CGG 0.634193 4_3:-49295268 None:intergenic
ATGAAATTGGGATAGCTGTG+AGG 0.634305 4_3:+49297128 Msa0644920:CDS
AGGATGATTAGAAGGATCAG+GGG 0.634565 4_3:-49295223 None:intergenic
TTCACAACAAAATTAAAGGG+GGG 0.640099 4_3:+49297212 Msa0644920:three_prime_UTR
GTTATGTGGCCTTGTAAAGG+TGG 0.644335 4_3:-49295126 None:intergenic
ACATTGGAGAGTTTGTGTCA+AGG 0.645472 4_3:+49296917 Msa0644920:CDS
TCATTGGCAATCATGTGTAG+AGG 0.648239 4_3:-49296548 None:intergenic
TGTCTTCAGCTACAAAGCAA+AGG 0.648746 4_3:+49295531 Msa0644920:CDS
GGTCAATACTTGCGGTACAG+GGG 0.656069 4_3:-49295031 None:intergenic
ATGTGATGCACTAAATGGGT+TGG 0.657832 4_3:+49297159 Msa0644920:CDS
GTGGTGATATTAGAACCAAA+CGG 0.661629 4_3:-49295107 None:intergenic
ACTTATGGTGAATTCAGAAG+GGG 0.666496 4_3:+49297072 Msa0644920:CDS
GGGTGTTATATTCAACACTG+TGG 0.687875 4_3:+49296457 Msa0644920:CDS
ACTCGGGTCGAATAACCCAA+AGG 0.704731 4_3:-49296739 None:intergenic
GTGTTGAATATAACACCCAA+AGG 0.708873 4_3:-49296452 None:intergenic
GAAATTGGGATAGCTGTGAG+GGG 0.725523 4_3:+49297130 Msa0644920:CDS
TCATGTGTAGAGGACCTATG+GGG 0.741563 4_3:-49296538 None:intergenic
CAATCAACGATGTTTCAGCG+TGG 0.755026 4_3:+49296762 Msa0644920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGGTAAAAAATAGAAATT+AGG - chr4_3:49295246-49295265 None:intergenic 15.0%
!! AAAACAAAAAAGTTATAGTA+AGG - chr4_3:49295580-49295599 None:intergenic 15.0%
!!! GTTAAATAGATTAGTTTTAT+TGG + chr4_3:49295927-49295946 Msa0644920:intron 15.0%
!! ATCTATCTATATATTATTGA+AGG - chr4_3:49296015-49296034 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG + chr4_3:49296164-49296183 Msa0644920:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG - chr4_3:49296390-49296409 None:intergenic 15.0%
!! AAAATGATAATTGTATATCT+TGG + chr4_3:49296600-49296619 Msa0644920:CDS 15.0%
!! AAAGGTAAAAAATAGAAATT+AGG - chr4_3:49295246-49295265 None:intergenic 15.0%
!! AAAACAAAAAAGTTATAGTA+AGG - chr4_3:49295580-49295599 None:intergenic 15.0%
!!! GTTAAATAGATTAGTTTTAT+TGG + chr4_3:49295927-49295946 Msa0644920:intron 15.0%
!! ATCTATCTATATATTATTGA+AGG - chr4_3:49296015-49296034 None:intergenic 15.0%
!! ATGTAAATATAAATATGTTG+AGG + chr4_3:49296164-49296183 Msa0644920:intron 15.0%
!!! TTGATTTGTCAAATTAAAAA+GGG - chr4_3:49296390-49296409 None:intergenic 15.0%
!! AAAATGATAATTGTATATCT+TGG + chr4_3:49296600-49296619 Msa0644920:CDS 15.0%
!!! TCATATTTTCAATTCATTCA+TGG + chr4_3:49295648-49295667 Msa0644920:intron 20.0%
!!! CATATTTTCAATTCATTCAT+GGG + chr4_3:49295649-49295668 Msa0644920:intron 20.0%
!! GAAAAATGAGAATATTCTTA+TGG + chr4_3:49295748-49295767 Msa0644920:intron 20.0%
!! TATCTATATATTATTGAAGG+TGG - chr4_3:49296012-49296031 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG - chr4_3:49296389-49296408 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG - chr4_3:49296391-49296410 None:intergenic 20.0%
!! AAATAAGGTTGACAAATAAT+TGG - chr4_3:49296947-49296966 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG + chr4_3:49296947-49296966 Msa0644920:CDS 20.0%
!! TGATTTCACAACAAAATTAA+AGG + chr4_3:49297208-49297227 Msa0644920:exon 20.0%
!! GATTTCACAACAAAATTAAA+GGG + chr4_3:49297209-49297228 Msa0644920:exon 20.0%
!! ATTTCACAACAAAATTAAAG+GGG + chr4_3:49297210-49297229 Msa0644920:exon 20.0%
!!! ACTTTAATTAGTTTGTTTTG+TGG + chr4_3:49297274-49297293 Msa0644920:three_prime_UTR 20.0%
!!! TCATATTTTCAATTCATTCA+TGG + chr4_3:49295648-49295667 Msa0644920:intron 20.0%
!!! CATATTTTCAATTCATTCAT+GGG + chr4_3:49295649-49295668 Msa0644920:intron 20.0%
!! GAAAAATGAGAATATTCTTA+TGG + chr4_3:49295748-49295767 Msa0644920:intron 20.0%
!! TATCTATATATTATTGAAGG+TGG - chr4_3:49296012-49296031 None:intergenic 20.0%
!!! TGATTTGTCAAATTAAAAAG+GGG - chr4_3:49296389-49296408 None:intergenic 20.0%
!!! GTTGATTTGTCAAATTAAAA+AGG - chr4_3:49296391-49296410 None:intergenic 20.0%
!! AAATAAGGTTGACAAATAAT+TGG - chr4_3:49296947-49296966 None:intergenic 20.0%
!!! ATTATTTGTCAACCTTATTT+TGG + chr4_3:49296947-49296966 Msa0644920:CDS 20.0%
!! TGATTTCACAACAAAATTAA+AGG + chr4_3:49297208-49297227 Msa0644920:exon 20.0%
!! GATTTCACAACAAAATTAAA+GGG + chr4_3:49297209-49297228 Msa0644920:exon 20.0%
!! ATTTCACAACAAAATTAAAG+GGG + chr4_3:49297210-49297229 Msa0644920:exon 20.0%
!!! ACTTTAATTAGTTTGTTTTG+TGG + chr4_3:49297274-49297293 Msa0644920:three_prime_UTR 20.0%
! TAGAAATTAGGATGATTAGA+AGG - chr4_3:49295234-49295253 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG - chr4_3:49295289-49295308 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG - chr4_3:49295301-49295320 None:intergenic 25.0%
! AAACTAGCAAATGAAAATCA+TGG + chr4_3:49295381-49295400 Msa0644920:CDS 25.0%
!!! TTTTCACCAGTTACTTTTTT+TGG + chr4_3:49295596-49295615 Msa0644920:intron 25.0%
! ATTGATCCAAAAAAAGTAAC+TGG - chr4_3:49295605-49295624 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG - chr4_3:49295836-49295855 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG - chr4_3:49295837-49295856 None:intergenic 25.0%
!!! TTTTATTGGTTATTCTTTGC+TGG + chr4_3:49295941-49295960 Msa0644920:intron 25.0%
! TATATTATTGAAGGTGGAAT+TGG - chr4_3:49296006-49296025 None:intergenic 25.0%
!! TTAAACATGAGGAATCTTTT+GGG - chr4_3:49296055-49296074 None:intergenic 25.0%
!! ATTAAACATGAGGAATCTTT+TGG - chr4_3:49296056-49296075 None:intergenic 25.0%
! AGCTAAAGAAATTATGGTTA+TGG - chr4_3:49296129-49296148 None:intergenic 25.0%
! CATACAAGCTAAAGAAATTA+TGG - chr4_3:49296135-49296154 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG - chr4_3:49296211-49296230 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG + chr4_3:49296643-49296662 Msa0644920:CDS 25.0%
! TCTGTGTTATATGTAAGTTT+GGG + chr4_3:49296644-49296663 Msa0644920:CDS 25.0%
! AATGGTGTAATGTAATAGAA+AGG + chr4_3:49297023-49297042 Msa0644920:CDS 25.0%
! ATGGTGTAATGTAATAGAAA+GGG + chr4_3:49297024-49297043 Msa0644920:CDS 25.0%
! TTTCACAACAAAATTAAAGG+GGG + chr4_3:49297211-49297230 Msa0644920:three_prime_UTR 25.0%
! TAGAAATTAGGATGATTAGA+AGG - chr4_3:49295234-49295253 None:intergenic 25.0%
! AAAATTCTTGGAAGTGATTT+GGG - chr4_3:49295289-49295308 None:intergenic 25.0%
! AGCAATATCTACAAAATTCT+TGG - chr4_3:49295301-49295320 None:intergenic 25.0%
! AAACTAGCAAATGAAAATCA+TGG + chr4_3:49295381-49295400 Msa0644920:CDS 25.0%
!!! TTTTCACCAGTTACTTTTTT+TGG + chr4_3:49295596-49295615 Msa0644920:intron 25.0%
! ATTGATCCAAAAAAAGTAAC+TGG - chr4_3:49295605-49295624 None:intergenic 25.0%
! CTTGTTGAAATCAATATGTA+GGG - chr4_3:49295836-49295855 None:intergenic 25.0%
! TCTTGTTGAAATCAATATGT+AGG - chr4_3:49295837-49295856 None:intergenic 25.0%
!!! TTTTATTGGTTATTCTTTGC+TGG + chr4_3:49295941-49295960 Msa0644920:intron 25.0%
! TATATTATTGAAGGTGGAAT+TGG - chr4_3:49296006-49296025 None:intergenic 25.0%
!! TTAAACATGAGGAATCTTTT+GGG - chr4_3:49296055-49296074 None:intergenic 25.0%
!! ATTAAACATGAGGAATCTTT+TGG - chr4_3:49296056-49296075 None:intergenic 25.0%
! AGCTAAAGAAATTATGGTTA+TGG - chr4_3:49296129-49296148 None:intergenic 25.0%
! CATACAAGCTAAAGAAATTA+TGG - chr4_3:49296135-49296154 None:intergenic 25.0%
! CATTTCTTAACATGAATAAG+TGG - chr4_3:49296211-49296230 None:intergenic 25.0%
! TTCTGTGTTATATGTAAGTT+TGG + chr4_3:49296643-49296662 Msa0644920:CDS 25.0%
! TCTGTGTTATATGTAAGTTT+GGG + chr4_3:49296644-49296663 Msa0644920:CDS 25.0%
! AATGGTGTAATGTAATAGAA+AGG + chr4_3:49297023-49297042 Msa0644920:CDS 25.0%
! ATGGTGTAATGTAATAGAAA+GGG + chr4_3:49297024-49297043 Msa0644920:CDS 25.0%
! TTTCACAACAAAATTAAAGG+GGG + chr4_3:49297211-49297230 Msa0644920:three_prime_UTR 25.0%
ACTATATTGGTCAATACTTG+CGG - chr4_3:49295042-49295061 None:intergenic 30.0%
!!! TTCCATCAACTTTTTTTGGT+TGG - chr4_3:49295073-49295092 None:intergenic 30.0%
!!! GAGTTTCCATCAACTTTTTT+TGG - chr4_3:49295077-49295096 None:intergenic 30.0%
!!! TATTTTTTACCTTTCTCCGA+TGG + chr4_3:49295252-49295271 Msa0644920:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG - chr4_3:49295271-49295290 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG - chr4_3:49295290-49295309 None:intergenic 30.0%
ATTTGTACACATCCATACAT+GGG + chr4_3:49295708-49295727 Msa0644920:intron 30.0%
! ACTCTATCATTTTCCTTAAG+AGG + chr4_3:49295880-49295899 Msa0644920:intron 30.0%
! CTCTATCATTTTCCTTAAGA+GGG + chr4_3:49295881-49295900 Msa0644920:intron 30.0%
TATGACAGATTCAAAGTCAA+GGG + chr4_3:49296322-49296341 Msa0644920:intron 30.0%
AACACTTTCAATAACACCTT+TGG + chr4_3:49296436-49296455 Msa0644920:CDS 30.0%
ACACTTTCAATAACACCTTT+GGG + chr4_3:49296437-49296456 Msa0644920:CDS 30.0%
! GGTTAACTTTGTATAGCTTT+TGG - chr4_3:49296514-49296533 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG - chr4_3:49296567-49296586 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG + chr4_3:49297115-49297134 Msa0644920:CDS 30.0%
CAGAATTGAAGCATGAAATT+GGG + chr4_3:49297116-49297135 Msa0644920:CDS 30.0%
TTCACAACAAAATTAAAGGG+GGG + chr4_3:49297212-49297231 Msa0644920:three_prime_UTR 30.0%
CCTATTCAATTAACCTTACA+AGG - chr4_3:49297250-49297269 None:intergenic 30.0%
CCTTGTAAGGTTAATTGAAT+AGG + chr4_3:49297247-49297266 Msa0644920:three_prime_UTR 30.0%
!!! AGTTTGTTTTGTGGTGATTA+AGG + chr4_3:49297283-49297302 Msa0644920:three_prime_UTR 30.0%
ACTATATTGGTCAATACTTG+CGG - chr4_3:49295042-49295061 None:intergenic 30.0%
!!! TTCCATCAACTTTTTTTGGT+TGG - chr4_3:49295073-49295092 None:intergenic 30.0%
!!! GAGTTTCCATCAACTTTTTT+TGG - chr4_3:49295077-49295096 None:intergenic 30.0%
!!! TATTTTTTACCTTTCTCCGA+TGG + chr4_3:49295252-49295271 Msa0644920:CDS 30.0%
TTGGGTATTAGATAAACCAT+CGG - chr4_3:49295271-49295290 None:intergenic 30.0%
CAAAATTCTTGGAAGTGATT+TGG - chr4_3:49295290-49295309 None:intergenic 30.0%
ATTTGTACACATCCATACAT+GGG + chr4_3:49295708-49295727 Msa0644920:intron 30.0%
! ACTCTATCATTTTCCTTAAG+AGG + chr4_3:49295880-49295899 Msa0644920:intron 30.0%
! CTCTATCATTTTCCTTAAGA+GGG + chr4_3:49295881-49295900 Msa0644920:intron 30.0%
TATGACAGATTCAAAGTCAA+GGG + chr4_3:49296322-49296341 Msa0644920:intron 30.0%
AACACTTTCAATAACACCTT+TGG + chr4_3:49296436-49296455 Msa0644920:CDS 30.0%
ACACTTTCAATAACACCTTT+GGG + chr4_3:49296437-49296456 Msa0644920:CDS 30.0%
! GGTTAACTTTGTATAGCTTT+TGG - chr4_3:49296514-49296533 None:intergenic 30.0%
ACTAGTATTGTTAGCATCAT+TGG - chr4_3:49296567-49296586 None:intergenic 30.0%
ACAGAATTGAAGCATGAAAT+TGG + chr4_3:49297115-49297134 Msa0644920:CDS 30.0%
CAGAATTGAAGCATGAAATT+GGG + chr4_3:49297116-49297135 Msa0644920:CDS 30.0%
TTCACAACAAAATTAAAGGG+GGG + chr4_3:49297212-49297231 Msa0644920:three_prime_UTR 30.0%
CCTATTCAATTAACCTTACA+AGG - chr4_3:49297250-49297269 None:intergenic 30.0%
CCTTGTAAGGTTAATTGAAT+AGG + chr4_3:49297247-49297266 Msa0644920:three_prime_UTR 30.0%
!!! AGTTTGTTTTGTGGTGATTA+AGG + chr4_3:49297283-49297302 Msa0644920:three_prime_UTR 30.0%
GTTGGAGGTTTGTACTATAT+TGG - chr4_3:49295055-49295074 None:intergenic 35.0%
!!! CATCAACTTTTTTTGGTTGG+AGG - chr4_3:49295070-49295089 None:intergenic 35.0%
CTCCAACCAAAAAAAGTTGA+TGG + chr4_3:49295068-49295087 Msa0644920:exon 35.0%
!! AGTTGATGGAAACTCAAACT+AGG + chr4_3:49295082-49295101 Msa0644920:exon 35.0%
GTGGTGATATTAGAACCAAA+CGG - chr4_3:49295110-49295129 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG + chr4_3:49295117-49295136 Msa0644920:CDS 35.0%
! GAAACCTTTTGAATGAAGGA+TGG - chr4_3:49295172-49295191 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG - chr4_3:49295176-49295195 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG - chr4_3:49295227-49295246 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG - chr4_3:49295228-49295247 None:intergenic 35.0%
TTAGATAAACCATCGGAGAA+AGG - chr4_3:49295264-49295283 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG + chr4_3:49295335-49295354 Msa0644920:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG + chr4_3:49295411-49295430 Msa0644920:CDS 35.0%
!! TTTGTCCTTCATCGATTCTT+TGG + chr4_3:49295437-49295456 Msa0644920:CDS 35.0%
AATTAGTAGCACTAGTGGTT+CGG - chr4_3:49295494-49295513 None:intergenic 35.0%
GAGTAAATTAGTAGCACTAG+TGG - chr4_3:49295499-49295518 None:intergenic 35.0%
CATTTGTACACATCCATACA+TGG + chr4_3:49295707-49295726 Msa0644920:intron 35.0%
GATAGAGTCGTGTAAACATA+TGG - chr4_3:49295868-49295887 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG + chr4_3:49295975-49295994 Msa0644920:intron 35.0%
CTTCAAGCTCATTAAACATG+AGG - chr4_3:49296066-49296085 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG + chr4_3:49296181-49296200 Msa0644920:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG + chr4_3:49296321-49296340 Msa0644920:intron 35.0%
GTGTTGAATATAACACCCAA+AGG - chr4_3:49296455-49296474 None:intergenic 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG - chr4_3:49296508-49296527 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG + chr4_3:49296723-49296742 Msa0644920:CDS 35.0%
CAGCAGACAAAATTTCCTTT+GGG + chr4_3:49296724-49296743 Msa0644920:CDS 35.0%
! TGAAACATCGTTGATTGACT+CGG - chr4_3:49296759-49296778 None:intergenic 35.0%
ACACCTACTTTAACATCTTC+CGG - chr4_3:49296800-49296819 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG + chr4_3:49296957-49296976 Msa0644920:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG + chr4_3:49296958-49296977 Msa0644920:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG + chr4_3:49297038-49297057 Msa0644920:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG + chr4_3:49297039-49297058 Msa0644920:CDS 35.0%
AGACTTATGGTGAATTCAGA+AGG + chr4_3:49297070-49297089 Msa0644920:CDS 35.0%
GACTTATGGTGAATTCAGAA+GGG + chr4_3:49297071-49297090 Msa0644920:CDS 35.0%
ACTTATGGTGAATTCAGAAG+GGG + chr4_3:49297072-49297091 Msa0644920:CDS 35.0%
TCTTCATGTGATGCACTAAA+TGG + chr4_3:49297154-49297173 Msa0644920:CDS 35.0%
CTTCATGTGATGCACTAAAT+GGG + chr4_3:49297155-49297174 Msa0644920:CDS 35.0%
GAACACTTAAGTACCTTGTA+AGG + chr4_3:49297234-49297253 Msa0644920:three_prime_UTR 35.0%
GTTGGAGGTTTGTACTATAT+TGG - chr4_3:49295055-49295074 None:intergenic 35.0%
!!! CATCAACTTTTTTTGGTTGG+AGG - chr4_3:49295070-49295089 None:intergenic 35.0%
CTCCAACCAAAAAAAGTTGA+TGG + chr4_3:49295068-49295087 Msa0644920:exon 35.0%
!! AGTTGATGGAAACTCAAACT+AGG + chr4_3:49295082-49295101 Msa0644920:exon 35.0%
GTGGTGATATTAGAACCAAA+CGG - chr4_3:49295110-49295129 None:intergenic 35.0%
CTAATATCACCACCTTTACA+AGG + chr4_3:49295117-49295136 Msa0644920:CDS 35.0%
! GAAACCTTTTGAATGAAGGA+TGG - chr4_3:49295172-49295191 None:intergenic 35.0%
! TGGAGAAACCTTTTGAATGA+AGG - chr4_3:49295176-49295195 None:intergenic 35.0%
TAGGATGATTAGAAGGATCA+GGG - chr4_3:49295227-49295246 None:intergenic 35.0%
TTAGGATGATTAGAAGGATC+AGG - chr4_3:49295228-49295247 None:intergenic 35.0%
TTAGATAAACCATCGGAGAA+AGG - chr4_3:49295264-49295283 None:intergenic 35.0%
AAAGTGCGTATCTTCACTTA+AGG + chr4_3:49295335-49295354 Msa0644920:CDS 35.0%
ATTGCTTGCATCATCTATGA+TGG + chr4_3:49295411-49295430 Msa0644920:CDS 35.0%
!! TTTGTCCTTCATCGATTCTT+TGG + chr4_3:49295437-49295456 Msa0644920:CDS 35.0%
AATTAGTAGCACTAGTGGTT+CGG - chr4_3:49295494-49295513 None:intergenic 35.0%
GAGTAAATTAGTAGCACTAG+TGG - chr4_3:49295499-49295518 None:intergenic 35.0%
CATTTGTACACATCCATACA+TGG + chr4_3:49295707-49295726 Msa0644920:intron 35.0%
GATAGAGTCGTGTAAACATA+TGG - chr4_3:49295868-49295887 None:intergenic 35.0%
GAATCTCTCTCAATCACTAT+TGG + chr4_3:49295975-49295994 Msa0644920:intron 35.0%
CTTCAAGCTCATTAAACATG+AGG - chr4_3:49296066-49296085 None:intergenic 35.0%
TTGAGGTTAGAATTCGAACT+CGG + chr4_3:49296181-49296200 Msa0644920:intron 35.0%
GTATGACAGATTCAAAGTCA+AGG + chr4_3:49296321-49296340 Msa0644920:intron 35.0%
GTGTTGAATATAACACCCAA+AGG - chr4_3:49296455-49296474 None:intergenic 35.0%
!!! CTTTGTATAGCTTTTGGAGT+TGG - chr4_3:49296508-49296527 None:intergenic 35.0%
ACAGCAGACAAAATTTCCTT+TGG + chr4_3:49296723-49296742 Msa0644920:CDS 35.0%
CAGCAGACAAAATTTCCTTT+GGG + chr4_3:49296724-49296743 Msa0644920:CDS 35.0%
! TGAAACATCGTTGATTGACT+CGG - chr4_3:49296759-49296778 None:intergenic 35.0%
ACACCTACTTTAACATCTTC+CGG - chr4_3:49296800-49296819 None:intergenic 35.0%
!!! AACCTTATTTTGGAGATCAG+AGG + chr4_3:49296957-49296976 Msa0644920:CDS 35.0%
!!! ACCTTATTTTGGAGATCAGA+GGG + chr4_3:49296958-49296977 Msa0644920:CDS 35.0%
TAGAAAGGGATGAGATTGAA+AGG + chr4_3:49297038-49297057 Msa0644920:CDS 35.0%
AGAAAGGGATGAGATTGAAA+GGG + chr4_3:49297039-49297058 Msa0644920:CDS 35.0%
AGACTTATGGTGAATTCAGA+AGG + chr4_3:49297070-49297089 Msa0644920:CDS 35.0%
GACTTATGGTGAATTCAGAA+GGG + chr4_3:49297071-49297090 Msa0644920:CDS 35.0%
ACTTATGGTGAATTCAGAAG+GGG + chr4_3:49297072-49297091 Msa0644920:CDS 35.0%
TCTTCATGTGATGCACTAAA+TGG + chr4_3:49297154-49297173 Msa0644920:CDS 35.0%
CTTCATGTGATGCACTAAAT+GGG + chr4_3:49297155-49297174 Msa0644920:CDS 35.0%
GAACACTTAAGTACCTTGTA+AGG + chr4_3:49297234-49297253 Msa0644920:three_prime_UTR 35.0%
GTTGAAGCATAGGAGTTATG+TGG - chr4_3:49295143-49295162 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG - chr4_3:49295169-49295188 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG - chr4_3:49295202-49295221 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG - chr4_3:49295214-49295233 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG - chr4_3:49295215-49295234 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG - chr4_3:49295226-49295245 None:intergenic 40.0%
TGTCTTCAGCTACAAAGCAA+AGG + chr4_3:49295531-49295550 Msa0644920:CDS 40.0%
AAAGGTTACCTTCCATTGCA+AGG + chr4_3:49295549-49295568 Msa0644920:CDS 40.0%
! AGTAAGGTACTACCTTGCAA+TGG - chr4_3:49295564-49295583 None:intergenic 40.0%
CAGCAGAAATTTCCCATGTA+TGG - chr4_3:49295723-49295742 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG - chr4_3:49295896-49295915 None:intergenic 40.0%
! AACATGAGGAATCTTTTGGG+AGG - chr4_3:49296052-49296071 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG + chr4_3:49296328-49296347 Msa0644920:intron 40.0%
! GGGTGTTATATTCAACACTG+TGG + chr4_3:49296457-49296476 Msa0644920:CDS 40.0%
AAAGTTAACCTCTTCCCCAT+AGG + chr4_3:49296524-49296543 Msa0644920:CDS 40.0%
ATCATGTGTAGAGGACCTAT+GGG - chr4_3:49296542-49296561 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG - chr4_3:49296543-49296562 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG - chr4_3:49296551-49296570 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG + chr4_3:49296661-49296680 Msa0644920:CDS 40.0%
! GAAACATCGTTGATTGACTC+GGG - chr4_3:49296758-49296777 None:intergenic 40.0%
TTGCCGGAAGATGTTAAAGT+AGG + chr4_3:49296794-49296813 Msa0644920:CDS 40.0%
TGTGCCAAAACTTCACTTTG+AGG - chr4_3:49296854-49296873 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG + chr4_3:49296901-49296920 Msa0644920:CDS 40.0%
ACATTGGAGAGTTTGTGTCA+AGG + chr4_3:49296917-49296936 Msa0644920:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG - chr4_3:49296962-49296981 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG + chr4_3:49297057-49297076 Msa0644920:CDS 40.0%
ATGAAATTGGGATAGCTGTG+AGG + chr4_3:49297128-49297147 Msa0644920:CDS 40.0%
TGAAATTGGGATAGCTGTGA+GGG + chr4_3:49297129-49297148 Msa0644920:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG + chr4_3:49297159-49297178 Msa0644920:CDS 40.0%
GTTGAAGCATAGGAGTTATG+TGG - chr4_3:49295143-49295162 None:intergenic 40.0%
! ACCTTTTGAATGAAGGATGG+TGG - chr4_3:49295169-49295188 None:intergenic 40.0%
ATTGAAATGGGTGTGTGCTA+TGG - chr4_3:49295202-49295221 None:intergenic 40.0%
AGGATCAGGGGAATTGAAAT+GGG - chr4_3:49295214-49295233 None:intergenic 40.0%
AAGGATCAGGGGAATTGAAA+TGG - chr4_3:49295215-49295234 None:intergenic 40.0%
AGGATGATTAGAAGGATCAG+GGG - chr4_3:49295226-49295245 None:intergenic 40.0%
TGTCTTCAGCTACAAAGCAA+AGG + chr4_3:49295531-49295550 Msa0644920:CDS 40.0%
AAAGGTTACCTTCCATTGCA+AGG + chr4_3:49295549-49295568 Msa0644920:CDS 40.0%
! AGTAAGGTACTACCTTGCAA+TGG - chr4_3:49295564-49295583 None:intergenic 40.0%
CAGCAGAAATTTCCCATGTA+TGG - chr4_3:49295723-49295742 None:intergenic 40.0%
! GTTTTGTGAAGACCCTCTTA+AGG - chr4_3:49295896-49295915 None:intergenic 40.0%
! AACATGAGGAATCTTTTGGG+AGG - chr4_3:49296052-49296071 None:intergenic 40.0%
AGATTCAAAGTCAAGGGACT+TGG + chr4_3:49296328-49296347 Msa0644920:intron 40.0%
! GGGTGTTATATTCAACACTG+TGG + chr4_3:49296457-49296476 Msa0644920:CDS 40.0%
AAAGTTAACCTCTTCCCCAT+AGG + chr4_3:49296524-49296543 Msa0644920:CDS 40.0%
ATCATGTGTAGAGGACCTAT+GGG - chr4_3:49296542-49296561 None:intergenic 40.0%
AATCATGTGTAGAGGACCTA+TGG - chr4_3:49296543-49296562 None:intergenic 40.0%
TCATTGGCAATCATGTGTAG+AGG - chr4_3:49296551-49296570 None:intergenic 40.0%
! TTTGGGAAGCATAGCTAGTT+GGG + chr4_3:49296661-49296680 Msa0644920:CDS 40.0%
! GAAACATCGTTGATTGACTC+GGG - chr4_3:49296758-49296777 None:intergenic 40.0%
TTGCCGGAAGATGTTAAAGT+AGG + chr4_3:49296794-49296813 Msa0644920:CDS 40.0%
TGTGCCAAAACTTCACTTTG+AGG - chr4_3:49296854-49296873 None:intergenic 40.0%
CTGTGGTTGGAATTCTACAT+TGG + chr4_3:49296901-49296920 Msa0644920:CDS 40.0%
ACATTGGAGAGTTTGTGTCA+AGG + chr4_3:49296917-49296936 Msa0644920:CDS 40.0%
ACCCTCTGATCTCCAAAATA+AGG - chr4_3:49296962-49296981 None:intergenic 40.0%
AAGGGTGGTTAGAAGACTTA+TGG + chr4_3:49297057-49297076 Msa0644920:CDS 40.0%
ATGAAATTGGGATAGCTGTG+AGG + chr4_3:49297128-49297147 Msa0644920:CDS 40.0%
TGAAATTGGGATAGCTGTGA+GGG + chr4_3:49297129-49297148 Msa0644920:CDS 40.0%
ATGTGATGCACTAAATGGGT+TGG + chr4_3:49297159-49297178 Msa0644920:CDS 40.0%
TGGTCAATACTTGCGGTACA+GGG - chr4_3:49295035-49295054 None:intergenic 45.0%
TTGGTCAATACTTGCGGTAC+AGG - chr4_3:49295036-49295055 None:intergenic 45.0%
! AACTCAAACTAGGCACCGTT+TGG + chr4_3:49295092-49295111 Msa0644920:CDS 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG - chr4_3:49295129-49295148 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG - chr4_3:49295132-49295151 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG - chr4_3:49295153-49295172 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG + chr4_3:49295165-49295184 Msa0644920:CDS 45.0%
CTTGGCCAAAGAATCGATGA+AGG - chr4_3:49295445-49295464 None:intergenic 45.0%
!! CTTCATCGATTCTTTGGCCA+AGG + chr4_3:49295443-49295462 Msa0644920:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG - chr4_3:49295463-49295482 None:intergenic 45.0%
AGGTACTACCTTGCAATGGA+AGG - chr4_3:49295560-49295579 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG - chr4_3:49296541-49296560 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG + chr4_3:49296660-49296679 Msa0644920:CDS 45.0%
GAGCTAACTGAAGTTGCTTG+TGG + chr4_3:49296692-49296711 Msa0644920:CDS 45.0%
CAATCAACGATGTTTCAGCG+TGG + chr4_3:49296762-49296781 Msa0644920:CDS 45.0%
AGCGTGGTTAGAATCTTTGC+CGG + chr4_3:49296778-49296797 Msa0644920:CDS 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG + chr4_3:49296809-49296828 Msa0644920:CDS 45.0%
AGAGAGGCAGTGTTGTGAAA+TGG + chr4_3:49296825-49296844 Msa0644920:CDS 45.0%
GAGAGGCAGTGTTGTGAAAT+GGG + chr4_3:49296826-49296845 Msa0644920:CDS 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG + chr4_3:49296847-49296866 Msa0644920:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG + chr4_3:49296863-49296882 Msa0644920:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG + chr4_3:49296873-49296892 Msa0644920:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG + chr4_3:49296969-49296988 Msa0644920:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG + chr4_3:49296987-49297006 Msa0644920:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG + chr4_3:49296991-49297010 Msa0644920:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG + chr4_3:49296995-49297014 Msa0644920:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG + chr4_3:49297005-49297024 Msa0644920:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG + chr4_3:49297042-49297061 Msa0644920:CDS 45.0%
GAAATTGGGATAGCTGTGAG+GGG + chr4_3:49297130-49297149 Msa0644920:CDS 45.0%
TGGTCAATACTTGCGGTACA+GGG - chr4_3:49295035-49295054 None:intergenic 45.0%
TTGGTCAATACTTGCGGTAC+AGG - chr4_3:49295036-49295055 None:intergenic 45.0%
! AACTCAAACTAGGCACCGTT+TGG + chr4_3:49295092-49295111 Msa0644920:CDS 45.0%
!! GTTATGTGGCCTTGTAAAGG+TGG - chr4_3:49295129-49295148 None:intergenic 45.0%
!! GGAGTTATGTGGCCTTGTAA+AGG - chr4_3:49295132-49295151 None:intergenic 45.0%
! ATGGTGGCTAGTTGAAGCAT+AGG - chr4_3:49295153-49295172 None:intergenic 45.0%
GCCACCATCCTTCATTCAAA+AGG + chr4_3:49295165-49295184 Msa0644920:CDS 45.0%
CTTGGCCAAAGAATCGATGA+AGG - chr4_3:49295445-49295464 None:intergenic 45.0%
!! CTTCATCGATTCTTTGGCCA+AGG + chr4_3:49295443-49295462 Msa0644920:CDS 45.0%
!! GCTTGGTAGCTTTAGTTCCT+TGG - chr4_3:49295463-49295482 None:intergenic 45.0%
AGGTACTACCTTGCAATGGA+AGG - chr4_3:49295560-49295579 None:intergenic 45.0%
TCATGTGTAGAGGACCTATG+GGG - chr4_3:49296541-49296560 None:intergenic 45.0%
! GTTTGGGAAGCATAGCTAGT+TGG + chr4_3:49296660-49296679 Msa0644920:CDS 45.0%
GAGCTAACTGAAGTTGCTTG+TGG + chr4_3:49296692-49296711 Msa0644920:CDS 45.0%
CAATCAACGATGTTTCAGCG+TGG + chr4_3:49296762-49296781 Msa0644920:CDS 45.0%
AGCGTGGTTAGAATCTTTGC+CGG + chr4_3:49296778-49296797 Msa0644920:CDS 45.0%
AAAGTAGGTGTAGCTGAGAG+AGG + chr4_3:49296809-49296828 Msa0644920:CDS 45.0%
AGAGAGGCAGTGTTGTGAAA+TGG + chr4_3:49296825-49296844 Msa0644920:CDS 45.0%
GAGAGGCAGTGTTGTGAAAT+GGG + chr4_3:49296826-49296845 Msa0644920:CDS 45.0%
! GGCACCTCAAAGTGAAGTTT+TGG + chr4_3:49296847-49296866 Msa0644920:CDS 45.0%
!! GTTTTGGCACATGAAGCTGT+TGG + chr4_3:49296863-49296882 Msa0644920:CDS 45.0%
! ATGAAGCTGTTGGAGGGTTT+TGG + chr4_3:49296873-49296892 Msa0644920:CDS 45.0%
GAGATCAGAGGGTAAATGCA+AGG + chr4_3:49296969-49296988 Msa0644920:CDS 45.0%
CAAGGTTGTTGAGCCATGTT+TGG + chr4_3:49296987-49297006 Msa0644920:CDS 45.0%
GTTGTTGAGCCATGTTTGGA+AGG + chr4_3:49296991-49297010 Msa0644920:CDS 45.0%
TTGAGCCATGTTTGGAAGGT+GGG + chr4_3:49296995-49297014 Msa0644920:CDS 45.0%
! TTTGGAAGGTGGGTTTGGAA+TGG + chr4_3:49297005-49297024 Msa0644920:CDS 45.0%
AAGGGATGAGATTGAAAGGG+TGG + chr4_3:49297042-49297061 Msa0644920:CDS 45.0%
GAAATTGGGATAGCTGTGAG+GGG + chr4_3:49297130-49297149 Msa0644920:CDS 45.0%
GGTCAATACTTGCGGTACAG+GGG - chr4_3:49295034-49295053 None:intergenic 50.0%
ATGGGTGTGTGCTATGGTGA+TGG - chr4_3:49295196-49295215 None:intergenic 50.0%
! GTGGTTCGGAAGACTATGCT+TGG - chr4_3:49295480-49295499 None:intergenic 50.0%
AATCGCAGCAAGTCCAGTTC+TGG - chr4_3:49296356-49296375 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG - chr4_3:49296742-49296761 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG + chr4_3:49296866-49296885 Msa0644920:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG + chr4_3:49296867-49296886 Msa0644920:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG + chr4_3:49296888-49296907 Msa0644920:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG + chr4_3:49296994-49297013 Msa0644920:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG - chr4_3:49297003-49297022 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG + chr4_3:49297000-49297019 Msa0644920:CDS 50.0%
GGTCAATACTTGCGGTACAG+GGG - chr4_3:49295034-49295053 None:intergenic 50.0%
ATGGGTGTGTGCTATGGTGA+TGG - chr4_3:49295196-49295215 None:intergenic 50.0%
! GTGGTTCGGAAGACTATGCT+TGG - chr4_3:49295480-49295499 None:intergenic 50.0%
AATCGCAGCAAGTCCAGTTC+TGG - chr4_3:49296356-49296375 None:intergenic 50.0%
ACTCGGGTCGAATAACCCAA+AGG - chr4_3:49296742-49296761 None:intergenic 50.0%
TTGGCACATGAAGCTGTTGG+AGG + chr4_3:49296866-49296885 Msa0644920:CDS 50.0%
TGGCACATGAAGCTGTTGGA+GGG + chr4_3:49296867-49296886 Msa0644920:CDS 50.0%
!!! GGTTTTGGAGTCACTGTGGT+TGG + chr4_3:49296888-49296907 Msa0644920:CDS 50.0%
GTTGAGCCATGTTTGGAAGG+TGG + chr4_3:49296994-49297013 Msa0644920:CDS 50.0%
CCAAACCCACCTTCCAAACA+TGG - chr4_3:49297003-49297022 None:intergenic 50.0%
! CCATGTTTGGAAGGTGGGTT+TGG + chr4_3:49297000-49297019 Msa0644920:CDS 50.0%
!! AAGGGACTTGGTGCCAGAAC+TGG + chr4_3:49296340-49296359 Msa0644920:CDS 55.0%
GTAGAGGACCTATGGGGAAG+AGG - chr4_3:49296535-49296554 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG + chr4_3:49296884-49296903 Msa0644920:CDS 55.0%
!! AAGGGACTTGGTGCCAGAAC+TGG + chr4_3:49296340-49296359 Msa0644920:CDS 55.0%
GTAGAGGACCTATGGGGAAG+AGG - chr4_3:49296535-49296554 None:intergenic 55.0%
!!! GGAGGGTTTTGGAGTCACTG+TGG + chr4_3:49296884-49296903 Msa0644920:CDS 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 49295016 49297327 49295016 ID=Msa0644920;Name=Msa0644920
chr4_3 mRNA 49295016 49297327 49295016 ID=Msa0644920-mRNA-1;Parent=Msa0644920;Name=Msa0644920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=71|1|1|1|1|1|2|117|454
chr4_3 exon 49295016 49295570 49295016 ID=Msa0644920-mRNA-1:exon:11748;Parent=Msa0644920-mRNA-1
chr4_3 exon 49296330 49297327 49296330 ID=Msa0644920-mRNA-1:exon:11749;Parent=Msa0644920-mRNA-1
chr4_3 five_prime_UTR 49295016 49295086 49295016 ID=Msa0644920-mRNA-1:five_prime_utr;Parent=Msa0644920-mRNA-1
chr4_3 CDS 49295087 49295570 49295087 ID=Msa0644920-mRNA-1:cds;Parent=Msa0644920-mRNA-1
chr4_3 CDS 49296330 49297210 49296330 ID=Msa0644920-mRNA-1:cds;Parent=Msa0644920-mRNA-1
chr4_3 three_prime_UTR 49297211 49297327 49297211 ID=Msa0644920-mRNA-1:three_prime_utr;Parent=Msa0644920-mRNA-1
Gene Sequence

>Msa0644920

ATGGAAACTCAAACTAGGCACCGTTTGGTTCTAATATCACCACCTTTACAAGGCCACATAACTCCTATGCTTCAACTAGCCACCATCCTTCATTCAAAAGGTTTCTCCATCACCATAGCACACACCCATTTCAATTCCCCTGATCCTTCTAATCATCCTAATTTCTATTTTTTACCTTTCTCCGATGGTTTATCTAATACCCAAATCACTTCCAAGAATTTTGTAGATATTGCTTCAACTCTAAATATAAAGTGCGTATCTTCACTTAAGGAGACATTAGTTCATTATATTACAAAACTAGCAAATGAAAATCATGGTGAAAAAATTGCTTGCATCATCTATGATGGATTTTTGTCCTTCATCGATTCTTTGGCCAAGGAACTAAAGCTACCAAGCATAGTCTTCCGAACCACTAGTGCTACTAATTTACTCACTTATCATGTGTGTCTTCAGCTACAAAGCAAAGGTTACCTTCCATTGCAAGATTCAAAGTCAAGGGACTTGGTGCCAGAACTGGACTTGCTGCGATTCAAAGATCTACCCCTTTTTAATTTGACAAATCAACATGATTTTCTACAAAGCATAGCTAGAACACTTTCAATAACACCTTTGGGTGTTATATTCAACACTGTGGAAAGCTTAGAAGATTCATCACTAAACCAACTCCAAAAGCTATACAAAGTTAACCTCTTCCCCATAGGTCCTCTACACATGATTGCCAATGATGCTAACAATACTAGTAGCATTCTGCAAAAAAATGATAATTGTATATCTTGGCTAAACAACAAAGCAAAAAATTCTGTGTTATATGTAAGTTTGGGAAGCATAGCTAGTTGGGAAGAGAAAGAGCTAACTGAAGTTGCTTGTGGCTTAGTCAACAGCAGACAAAATTTCCTTTGGGTTATTCGACCCGAGTCAATCAACGATGTTTCAGCGTGGTTAGAATCTTTGCCGGAAGATGTTAAAGTAGGTGTAGCTGAGAGAGGCAGTGTTGTGAAATGGGCACCTCAAAGTGAAGTTTTGGCACATGAAGCTGTTGGAGGGTTTTGGAGTCACTGTGGTTGGAATTCTACATTGGAGAGTTTGTGTCAAGGAGTGCCAATTATTTGTCAACCTTATTTTGGAGATCAGAGGGTAAATGCAAGGTTGTTGAGCCATGTTTGGAAGGTGGGTTTGGAATGGTGTAATGTAATAGAAAGGGATGAGATTGAAAGGGTGGTTAGAAGACTTATGGTGAATTCAGAAGGGGAGTTGATGAGACAAAGAGCTACAGAATTGAAGCATGAAATTGGGATAGCTGTGAGGGGTTCTTCATGTGATGCACTAAATGGGTTGGTAAAGTATATCTTATCAGTGAATGTCTGA
Protein sequence

>Msa0644920

METQTRHRLVLISPPLQGHITPMLQLATILHSKGFSITIAHTHFNSPDPSNHPNFYFLPFSDGLSNTQITSKNFVDIASTLNIKCVSSLKETLVHYITKLANENHGEKIACIIYDGFLSFIDSLAKELKLPSIVFRTTSATNLLTYHVCLQLQSKGYLPLQDSKSRDLVPELDLLRFKDLPLFNLTNQHDFLQSIARTLSITPLGVIFNTVESLEDSSLNQLQKLYKVNLFPIGPLHMIANDANNTSSILQKNDNCISWLNNKAKNSVLYVSLGSIASWEEKELTEVACGLVNSRQNFLWVIRPESINDVSAWLESLPEDVKVGVAERGSVVKWAPQSEVLAHEAVGGFWSHCGWNSTLESLCQGVPIICQPYFGDQRVNARLLSHVWKVGLEWCNVIERDEIERVVRRLMVNSEGELMRQRATELKHEIGIAVRGSSCDALNGLVKYILSVNV*