Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0645770 | XP_024638393.1 | 92.101 | 595 | 29 | 1 | 1 | 595 | 1 | 577 | 0.0 | 1060 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0645770 | sp|A9X4U2|HSDD3_ARATH | 52.456 | 570 | 237 | 7 | 10 | 571 | 9 | 552 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0645770 | Msa0764770 | 0.804115 | 2.522340e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0645770 | MtrunA17_Chr4g0033711 | 92.101 | 595 | 29 | 1 | 1 | 595 | 1 | 577 | 0.0 | 1060 |
| Msa0645770 | MtrunA17_Chr3g0136511 | 42.077 | 549 | 283 | 11 | 16 | 549 | 9 | 537 | 1.72e-137 | 411 |
| Msa0645770 | MtrunA17_Chr1g0157471 | 27.419 | 372 | 234 | 7 | 14 | 356 | 12 | 376 | 4.18e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0645770 | AT2G43420.1 | 52.456 | 570 | 237 | 7 | 10 | 571 | 9 | 552 | 0.0 | 557 |
| Msa0645770 | AT2G26260.1 | 41.241 | 548 | 287 | 9 | 16 | 549 | 12 | 538 | 5.33e-137 | 410 |
| Msa0645770 | AT2G26260.2 | 41.595 | 464 | 239 | 7 | 97 | 549 | 5 | 447 | 1.71e-117 | 357 |
| Msa0645770 | AT1G47290.2 | 40.899 | 445 | 228 | 10 | 16 | 443 | 12 | 438 | 9.03e-101 | 313 |
| Msa0645770 | AT1G47290.1 | 46.591 | 352 | 172 | 6 | 16 | 353 | 12 | 361 | 2.74e-96 | 300 |
| Msa0645770 | AT2G33630.1 | 27.005 | 374 | 231 | 11 | 15 | 357 | 13 | 375 | 3.10e-25 | 109 |
Find 157 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGAAATCGTCGCCATTAT+TGG | 0.186420 | 4_3:-51194288 | None:intergenic |
| CTGAATAAAATGAACTAATA+AGG | 0.193446 | 4_3:-51196641 | None:intergenic |
| AGAAACCGTTTGGAAATTTA+AGG | 0.202728 | 4_3:-51195854 | None:intergenic |
| AGGTCTGGTCTTCGCATTTA+TGG | 0.206815 | 4_3:+51200394 | Msa0645770:intron |
| AAGATGAATCTTTAGCTAAA+TGG | 0.228488 | 4_3:-51197309 | None:intergenic |
| TAAGGGATAATTGAAGTATC+TGG | 0.229423 | 4_3:-51196623 | None:intergenic |
| CAAATATAATTTCTATTTGT+TGG | 0.278240 | 4_3:+51193625 | Msa0645770:five_prime_UTR |
| TTCTCATTTCAGTTTATTAT+AGG | 0.283228 | 4_3:+51195760 | Msa0645770:intron |
| AGGCTTCTTCTGCACAGATA+TGG | 0.288826 | 4_3:-51195834 | None:intergenic |
| GTATCGCGGCTTCTGCATTA+TGG | 0.298204 | 4_3:+51200527 | Msa0645770:CDS |
| TCTCATTTCAGTTTATTATA+GGG | 0.298844 | 4_3:+51195761 | Msa0645770:intron |
| CCTAAAACATTGCAGGTTGC+AGG | 0.314136 | 4_3:+51200229 | Msa0645770:CDS |
| TTCCAAACGGTTTCTGTGGC+TGG | 0.327151 | 4_3:+51195862 | Msa0645770:CDS |
| CAAGGGGTTTCAAAATATAA+AGG | 0.328677 | 4_3:+51199217 | Msa0645770:CDS |
| TTGCAATTACAGTTCATCTA+TGG | 0.329327 | 4_3:+51199192 | Msa0645770:CDS |
| AGCTCTTGAAACTCGGTAAC+TGG | 0.331514 | 4_3:+51194018 | Msa0645770:CDS |
| AGAAATTTCCAGAACTTCAT+AGG | 0.339878 | 4_3:-51196004 | None:intergenic |
| TTTCTAAAGTTAGCAAGATA+TGG | 0.340584 | 4_3:+51195097 | Msa0645770:CDS |
| GCATCCTTCGCATGTTTCCT+TGG | 0.343415 | 4_3:+51198563 | Msa0645770:CDS |
| TTCGGCGATGCGGTGTTTAT+CGG | 0.345655 | 4_3:-51194150 | None:intergenic |
| CTTGCCCGCATCCTGGTTCT+TGG | 0.351027 | 4_3:-51200568 | None:intergenic |
| ATCTCGAGCCTATGAAGTTC+TGG | 0.357888 | 4_3:+51195996 | Msa0645770:CDS |
| GAGAACGTATTGCACTAAAT+TGG | 0.359341 | 4_3:-51196566 | None:intergenic |
| TAACATGTTAATTGACCTTA+AGG | 0.365154 | 4_3:+51194964 | Msa0645770:CDS |
| AAAGTGGTTATATGAAAAGT+TGG | 0.370480 | 4_3:+51196597 | Msa0645770:CDS |
| CATCCTTCGCATGTTTCCTT+GGG | 0.373805 | 4_3:+51198564 | Msa0645770:CDS |
| CCCCTGGGACTAGAATCTTT+TGG | 0.380025 | 4_3:-51193720 | None:intergenic |
| TGAATAAAATGAACTAATAA+GGG | 0.383233 | 4_3:-51196640 | None:intergenic |
| CTTCGTCCTAGTAATGTGTT+TGG | 0.389793 | 4_3:+51195046 | Msa0645770:CDS |
| CTTCGCATGTTTCCTTGGGC+TGG | 0.390502 | 4_3:+51198568 | Msa0645770:CDS |
| AGATGAATCTTTAGCTAAAT+GGG | 0.392771 | 4_3:-51197308 | None:intergenic |
| GATGTTGATAGTTCCAATAA+TGG | 0.394753 | 4_3:+51194275 | Msa0645770:CDS |
| AAGCTTCTGCTTGAGCCTTA+AGG | 0.395733 | 4_3:-51194979 | None:intergenic |
| CAATTGTGATTACAGAAGTT+AGG | 0.396280 | 4_3:-51200741 | None:intergenic |
| GAGATTCGGAGTGGTGAAGT+TGG | 0.396484 | 4_3:-51194073 | None:intergenic |
| GGCTTCTTCTGCACAGATAT+GGG | 0.399104 | 4_3:-51195833 | None:intergenic |
| TTCCAGCCACAGAAACCGTT+TGG | 0.407106 | 4_3:-51195864 | None:intergenic |
| GACTGGCCCAAGGGGATGAT+TGG | 0.407389 | 4_3:+51199240 | Msa0645770:CDS |
| ATCTTGTTGTTTCTTTACTT+TGG | 0.408148 | 4_3:-51193776 | None:intergenic |
| TGCTGAGCAGTTGAAAGTTC+GGG | 0.411099 | 4_3:-51196677 | None:intergenic |
| CTCAGATCTTGCCCGCATCC+TGG | 0.419582 | 4_3:-51200575 | None:intergenic |
| CCAGGACCAAACACATTACT+AGG | 0.425247 | 4_3:-51195052 | None:intergenic |
| TTCTATATACAGAAAGTGCC+TGG | 0.425516 | 4_3:+51199128 | Msa0645770:CDS |
| TACTGAGAGTGGGGACCCCT+GGG | 0.426984 | 4_3:-51193735 | None:intergenic |
| TTGAATGCTAATGACATTGA+TGG | 0.433974 | 4_3:+51195007 | Msa0645770:CDS |
| AAGTTGTTGACAACATTGAT+AGG | 0.434000 | 4_3:+51200283 | Msa0645770:CDS |
| TAAATGGGAGAATGACTCTA+TGG | 0.435195 | 4_3:-51197293 | None:intergenic |
| TTCTGTAATCACAATTGAAC+CGG | 0.435411 | 4_3:+51200747 | Msa0645770:three_prime_UTR |
| TCGTTTCACAGTCGCATCAA+TGG | 0.437085 | 4_3:+51193905 | Msa0645770:intron |
| AGATAGCCAAACAGAGGTTT+CGG | 0.437989 | 4_3:+51200596 | Msa0645770:exon |
| TGTGCATTTCTTTACCGAAT+GGG | 0.440416 | 4_3:+51201019 | Msa0645770:three_prime_UTR |
| AAGCTGCTTGGCAGTGGAAA+AGG | 0.441251 | 4_3:+51197364 | Msa0645770:CDS |
| GTGAAGGAAAAGAATCTGTT+AGG | 0.441687 | 4_3:-51200198 | None:intergenic |
| CTGCTGAGCAGTTGAAAGTT+CGG | 0.443163 | 4_3:-51196678 | None:intergenic |
| ACAATTGAACCGGTGAGTTA+AGG | 0.444802 | 4_3:+51200757 | Msa0645770:three_prime_UTR |
| TCTGATCTTTGACATCCTAT+AGG | 0.445336 | 4_3:+51200627 | Msa0645770:three_prime_UTR |
| TTTCAGTTTATTATAGGGAC+TGG | 0.452762 | 4_3:+51195766 | Msa0645770:intron |
| GTACTGAGAGTGGGGACCCC+TGG | 0.455670 | 4_3:-51193736 | None:intergenic |
| GACATCAATGAGCGTGCAAA+AGG | 0.458077 | 4_3:+51200864 | Msa0645770:three_prime_UTR |
| AAGTGGTTATATGAAAAGTT+GGG | 0.458760 | 4_3:+51196598 | Msa0645770:CDS |
| GCGAGTAACCTACAGCCTAT+AGG | 0.465921 | 4_3:-51200642 | None:intergenic |
| TCGTATAAGCTATTAGTTCA+AGG | 0.467296 | 4_3:+51194314 | Msa0645770:CDS |
| TGGCATACCTAAAACATTGC+AGG | 0.468586 | 4_3:+51200222 | Msa0645770:CDS |
| TACTATTTCGAAGGAGTTCG+TGG | 0.468952 | 4_3:+51200475 | Msa0645770:CDS |
| AAGGGGTTTCAAAATATAAA+GGG | 0.473586 | 4_3:+51199218 | Msa0645770:CDS |
| TAAGCATCAAGAATAAGATC+AGG | 0.479086 | 4_3:+51193650 | Msa0645770:five_prime_UTR |
| TTGGATAGAGTGAGTTGAAT+CGG | 0.480167 | 4_3:-51194054 | None:intergenic |
| CTTGTGACTTTACTTCTATG+TGG | 0.483414 | 4_3:+51198659 | Msa0645770:CDS |
| GGGAATGGAATACCTCGCTC+AGG | 0.483470 | 4_3:-51193693 | None:intergenic |
| AGAAGCCGCGATACAGAAAC+AGG | 0.491272 | 4_3:-51200518 | None:intergenic |
| CAATATGAATCAGAAATTGA+TGG | 0.493355 | 4_3:+51200434 | Msa0645770:CDS |
| GCATACACGTACAGCTTTGA+CGG | 0.497709 | 4_3:-51198695 | None:intergenic |
| GCAGATAAGCTGCTTGGCAG+TGG | 0.498828 | 4_3:+51197358 | Msa0645770:CDS |
| GCTAAGCCGAAACCTCTGTT+TGG | 0.499890 | 4_3:-51200602 | None:intergenic |
| TTGCTAGATCCAACCCCATT+CGG | 0.508431 | 4_3:-51201033 | None:intergenic |
| AGCTTCGGCGAGGAGAGATT+CGG | 0.508939 | 4_3:-51194087 | None:intergenic |
| GTCCAAAAGATTCTAGTCCC+AGG | 0.509446 | 4_3:+51193718 | Msa0645770:five_prime_UTR |
| GCGGGAAGAAGAGAGAGCTT+CGG | 0.517075 | 4_3:-51194102 | None:intergenic |
| AAACAAAATCTCACTTTCCA+CGG | 0.518178 | 4_3:-51194515 | None:intergenic |
| TTGTGCATTTCTTTACCGAA+TGG | 0.528622 | 4_3:+51201018 | Msa0645770:three_prime_UTR |
| AACGGTTTCTGTGGCTGGAA+AGG | 0.529050 | 4_3:+51195867 | Msa0645770:CDS |
| GTGATTACAGAAGTTAGGAC+GGG | 0.531850 | 4_3:-51200736 | None:intergenic |
| CCTAGTAATGTGTTTGGTCC+TGG | 0.532725 | 4_3:+51195052 | Msa0645770:CDS |
| TGAGATATATGTAATGTACT+AGG | 0.532736 | 4_3:+51200934 | Msa0645770:three_prime_UTR |
| TATTCTAATTACTATTTCGA+AGG | 0.535170 | 4_3:+51200466 | Msa0645770:CDS |
| ACTTTACTTCTATGTGGACA+TGG | 0.535685 | 4_3:+51198665 | Msa0645770:CDS |
| AAGGGATAATTGAAGTATCT+GGG | 0.536434 | 4_3:-51196622 | None:intergenic |
| GTCTTACAGCTCTTGAAACT+CGG | 0.537906 | 4_3:+51194011 | Msa0645770:CDS |
| ATATAGACCAATCATCCCCT+TGG | 0.538912 | 4_3:-51199247 | None:intergenic |
| AGAAGCCTTAAATTTCCAAA+CGG | 0.538975 | 4_3:+51195849 | Msa0645770:CDS |
| AATGTGAGTGGTACTGAGAG+TGG | 0.539721 | 4_3:-51193746 | None:intergenic |
| TCCAAAAGATTCTAGTCCCA+GGG | 0.540926 | 4_3:+51193719 | Msa0645770:five_prime_UTR |
| ACGTATTGCACTAAATTGGC+AGG | 0.543773 | 4_3:-51196562 | None:intergenic |
| TTGATAGAAACAACTTCAGA+AGG | 0.544616 | 4_3:-51200261 | None:intergenic |
| TATAGACCAATCATCCCCTT+GGG | 0.549707 | 4_3:-51199246 | None:intergenic |
| CGTCTTCAGCCTTAACTCAC+CGG | 0.549880 | 4_3:-51200766 | None:intergenic |
| GTTTATCGGTGAGGTCGAGA+TGG | 0.551299 | 4_3:-51194136 | None:intergenic |
| TGGAAGGTCTTGGATATCAA+AGG | 0.552089 | 4_3:+51196038 | Msa0645770:CDS |
| ATTACCAAGAACCAGGATGC+GGG | 0.557583 | 4_3:+51200564 | Msa0645770:CDS |
| ATTTCTTTACCGAATGGGGT+TGG | 0.561798 | 4_3:+51201024 | Msa0645770:three_prime_UTR |
| AATATAAAGGGACTGGCCCA+AGG | 0.562565 | 4_3:+51199230 | Msa0645770:CDS |
| TTAGGCGGAAGAGGATTCAT+CGG | 0.563311 | 4_3:+51193978 | Msa0645770:CDS |
| CAGTTCATCTATGGAACAAG+GGG | 0.563995 | 4_3:+51199201 | Msa0645770:CDS |
| AACGATTACCTTCGGCGATG+CGG | 0.567739 | 4_3:-51194160 | None:intergenic |
| TTTGACATCCTATAGGCTGT+AGG | 0.568347 | 4_3:+51200634 | Msa0645770:three_prime_UTR |
| AAATTTCCAAACGGTTTCTG+TGG | 0.569052 | 4_3:+51195858 | Msa0645770:CDS |
| GTTTCAAAATATAAAGGGAC+TGG | 0.573097 | 4_3:+51199223 | Msa0645770:CDS |
| GTGCATTTCTTTACCGAATG+GGG | 0.575481 | 4_3:+51201020 | Msa0645770:three_prime_UTR |
| GTTTGAATCTTGGAAGCGAT+CGG | 0.576682 | 4_3:-51193937 | None:intergenic |
| AGGCTGTAGGTTACTCGCAA+AGG | 0.578426 | 4_3:+51200647 | Msa0645770:three_prime_UTR |
| TACAGTTCATCTATGGAACA+AGG | 0.578912 | 4_3:+51199199 | Msa0645770:CDS |
| TTGGCAGGAAGCTTGATGAA+TGG | 0.582883 | 4_3:-51196547 | None:intergenic |
| TCAAAAGCAGATAAGCTGCT+TGG | 0.583217 | 4_3:+51197352 | Msa0645770:CDS |
| ATATAAAAGTGCTTCCAGAA+AGG | 0.584125 | 4_3:-51198613 | None:intergenic |
| CTGTAGGTTACTCGCAAAGG+TGG | 0.584862 | 4_3:+51200650 | Msa0645770:three_prime_UTR |
| GTTGTTTCTTTACTTTGGCG+CGG | 0.590875 | 4_3:-51193771 | None:intergenic |
| TTGACAACATTGATAGGTGT+AGG | 0.592543 | 4_3:+51200289 | Msa0645770:CDS |
| GGCACAAATTCTGTGTCACC+AGG | 0.593114 | 4_3:-51195070 | None:intergenic |
| ATCAGAAATTGATGGACTTG+CGG | 0.598614 | 4_3:+51200442 | Msa0645770:CDS |
| TTTCACAGTCGCATCAATGG+CGG | 0.602066 | 4_3:+51193908 | Msa0645770:intron |
| CATTACCAAGAACCAGGATG+CGG | 0.602239 | 4_3:+51200563 | Msa0645770:CDS |
| TTTGTTGTGGAGAAACGAGA+AGG | 0.604394 | 4_3:+51198541 | Msa0645770:CDS |
| ATGAGCAACATTCTCAGAGA+AGG | 0.605397 | 4_3:-51195809 | None:intergenic |
| ATATAAAGGGACTGGCCCAA+GGG | 0.607612 | 4_3:+51199231 | Msa0645770:CDS |
| TGTGATTACAGAAGTTAGGA+CGG | 0.610132 | 4_3:-51200737 | None:intergenic |
| TCTATATACAGAAAGTGCCT+GGG | 0.610255 | 4_3:+51199129 | Msa0645770:CDS |
| CAGGCAGATTTAAACCTCAA+GGG | 0.611030 | 4_3:-51196734 | None:intergenic |
| ATTCTCAGAGAAGGTGAAGT+CGG | 0.612623 | 4_3:-51195800 | None:intergenic |
| ATGTGAGTGGTACTGAGAGT+GGG | 0.613101 | 4_3:-51193745 | None:intergenic |
| GAGATGGACGTAAGAAGCGC+GGG | 0.614728 | 4_3:-51194120 | None:intergenic |
| TTTCAGCATTACCAAGAACC+AGG | 0.620715 | 4_3:+51200557 | Msa0645770:CDS |
| ACAGTTCATCTATGGAACAA+GGG | 0.622953 | 4_3:+51199200 | Msa0645770:CDS |
| GATAAACACCGCATCGCCGA+AGG | 0.624420 | 4_3:+51194152 | Msa0645770:CDS |
| ACTTACCTGTTTCTGTATCG+CGG | 0.631302 | 4_3:+51200513 | Msa0645770:CDS |
| TATAAAGGGACTGGCCCAAG+GGG | 0.640004 | 4_3:+51199232 | Msa0645770:CDS |
| TGATTACAGAAGTTAGGACG+GGG | 0.641389 | 4_3:-51200735 | None:intergenic |
| AAGCATCAAGAATAAGATCA+GGG | 0.641677 | 4_3:+51193651 | Msa0645770:five_prime_UTR |
| ATAAACCGCTGGCATATCCG+TGG | 0.642428 | 4_3:+51194498 | Msa0645770:CDS |
| TAAACCTCAAGGGAGACTAT+CGG | 0.644006 | 4_3:-51196724 | None:intergenic |
| GGAATGGAATACCTCGCTCA+GGG | 0.648873 | 4_3:-51193692 | None:intergenic |
| GTTTGATCGAGATAAACCGC+TGG | 0.649246 | 4_3:+51194487 | Msa0645770:CDS |
| CGAGATGGACGTAAGAAGCG+CGG | 0.655470 | 4_3:-51194121 | None:intergenic |
| CGATGCGGTGTTTATCGGTG+AGG | 0.666426 | 4_3:-51194145 | None:intergenic |
| GAGATCTTAAAATTAGACCC+AGG | 0.666664 | 4_3:-51199146 | None:intergenic |
| CGCACCGATAGTCTCCCTTG+AGG | 0.674196 | 4_3:+51196720 | Msa0645770:CDS |
| CAAGTTCTTAACCCTGAGCG+AGG | 0.675931 | 4_3:+51193681 | Msa0645770:five_prime_UTR |
| AGCAAGATATGGTTTCACAA+AGG | 0.676071 | 4_3:+51195108 | Msa0645770:CDS |
| ACTTTCCACGGATATGCCAG+CGG | 0.677833 | 4_3:-51194503 | None:intergenic |
| CAGCCCAAGGAAACATGCGA+AGG | 0.680658 | 4_3:-51198567 | None:intergenic |
| TTTGGCGCGGAAAATGTGAG+TGG | 0.684942 | 4_3:-51193758 | None:intergenic |
| AACATCCAAATAGAAAACGA+CGG | 0.691674 | 4_3:-51194258 | None:intergenic |
| CCAAAAGATTCTAGTCCCAG+GGG | 0.696797 | 4_3:+51193720 | Msa0645770:five_prime_UTR |
| AAGAAGAGAGAGCTTCGGCG+AGG | 0.697178 | 4_3:-51194097 | None:intergenic |
| TGTGAGTGGTACTGAGAGTG+GGG | 0.718472 | 4_3:-51193744 | None:intergenic |
| GATCTGAGATAGCCAAACAG+AGG | 0.725496 | 4_3:+51200590 | Msa0645770:exon |
| CGGCGAGGAGAGATTCGGAG+TGG | 0.728152 | 4_3:-51194082 | None:intergenic |
| GATTACAGAAGTTAGGACGG+GGG | 0.733761 | 4_3:-51200734 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTAAAGAAACAA+AGG | - | chr4_3:51194551-51194570 | None:intergenic | 10.0% |
| !! | TTCTTGTATTAAAAAATTAT+AGG | + | chr4_3:51195273-51195292 | Msa0645770:intron | 10.0% |
| !!! | AGAATTTTTTTTTTTTTTGT+TGG | - | chr4_3:51199804-51199823 | None:intergenic | 10.0% |
| !! | ACAAAAAAAAAAAAAATTCT+AGG | + | chr4_3:51199804-51199823 | Msa0645770:intron | 10.0% |
| !! | CAAATATAATTTCTATTTGT+TGG | + | chr4_3:51193625-51193644 | Msa0645770:five_prime_UTR | 15.0% |
| !! | TAATATAAAAGCAAGAAATA+CGG | - | chr4_3:51196464-51196483 | None:intergenic | 15.0% |
| !! | TGAATAAAATGAACTAATAA+GGG | - | chr4_3:51196643-51196662 | None:intergenic | 15.0% |
| !!! | AGTAACAATTTAAAATAAAC+AGG | - | chr4_3:51196756-51196775 | None:intergenic | 15.0% |
| !! | ATTGACAAAAAGAAATAAAA+AGG | - | chr4_3:51196995-51197014 | None:intergenic | 15.0% |
| !! | TTAAAGATATTAATCAAAGA+TGG | + | chr4_3:51197017-51197036 | Msa0645770:intron | 15.0% |
| !! | TTTAGTTAATTTATTCTAAG+TGG | + | chr4_3:51198913-51198932 | Msa0645770:intron | 15.0% |
| !!! | TTGTTATTTGAAAATTGTTT+TGG | + | chr4_3:51199021-51199040 | Msa0645770:intron | 15.0% |
| !!! | TGTTATTTGAAAATTGTTTT+GGG | + | chr4_3:51199022-51199041 | Msa0645770:intron | 15.0% |
| !! | AAATTTAATTAGAATAGGAA+AGG | - | chr4_3:51199336-51199355 | None:intergenic | 15.0% |
| !! | TATGTATTTGTGTAATAAAT+AGG | + | chr4_3:51199938-51199957 | Msa0645770:intron | 15.0% |
| !! | ATGTATTTGTGTAATAAATA+GGG | + | chr4_3:51199939-51199958 | Msa0645770:intron | 15.0% |
| !!! | TGTGATTTGATGTTTAATTT+AGG | + | chr4_3:51194389-51194408 | Msa0645770:intron | 20.0% |
| !! | ATAAAAGAATCAAGAGAAAT+TGG | + | chr4_3:51194571-51194590 | Msa0645770:intron | 20.0% |
| !!! | AGTAATCAAGTGATTTTAAA+AGG | + | chr4_3:51194920-51194939 | Msa0645770:intron | 20.0% |
| !!! | GTAATCAAGTGATTTTAAAA+GGG | + | chr4_3:51194921-51194940 | Msa0645770:intron | 20.0% |
| !! | TTAACAAAAAAAAACAAAGC+AGG | - | chr4_3:51195148-51195167 | None:intergenic | 20.0% |
| !! | AGTACAAAATTTAGTAGAAA+AGG | - | chr4_3:51195513-51195532 | None:intergenic | 20.0% |
| !! | CTAACATATACATATGAAAA+GGG | - | chr4_3:51195556-51195575 | None:intergenic | 20.0% |
| !! | ACTAACATATACATATGAAA+AGG | - | chr4_3:51195557-51195576 | None:intergenic | 20.0% |
| !! | TTCTCATTTCAGTTTATTAT+AGG | + | chr4_3:51195760-51195779 | Msa0645770:intron | 20.0% |
| !! | TCTCATTTCAGTTTATTATA+GGG | + | chr4_3:51195761-51195780 | Msa0645770:intron | 20.0% |
| !!! | TTGTTTTTCACCAAAAATAT+CGG | - | chr4_3:51196166-51196185 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTCATGTCAATA+TGG | + | chr4_3:51196253-51196272 | Msa0645770:intron | 20.0% |
| !!! | TTTCTTTTTCATGTCAATAT+GGG | + | chr4_3:51196254-51196273 | Msa0645770:intron | 20.0% |
| !! | TTCAAAAATTAAAGTCAAGA+TGG | - | chr4_3:51196290-51196309 | None:intergenic | 20.0% |
| !!! | ACTTTAATTTTTGAAGAACT+AGG | + | chr4_3:51196295-51196314 | Msa0645770:intron | 20.0% |
| !!! | ATTTTGGTTAATAGCATAAA+AGG | - | chr4_3:51196501-51196520 | None:intergenic | 20.0% |
| !! | CTGAATAAAATGAACTAATA+AGG | - | chr4_3:51196644-51196663 | None:intergenic | 20.0% |
| !!! | AAATTCAGTTTTTGATGAAA+GGG | - | chr4_3:51197050-51197069 | None:intergenic | 20.0% |
| !! | ATATATGAAGGAAAATAAAG+TGG | - | chr4_3:51197141-51197160 | None:intergenic | 20.0% |
| !!! | TATTTCATTCTTTTTAGAAC+AGG | - | chr4_3:51197175-51197194 | None:intergenic | 20.0% |
| !! | ATTGGTACAAGATAAATATA+AGG | + | chr4_3:51197786-51197805 | Msa0645770:intron | 20.0% |
| !! | TTGGTACAAGATAAATATAA+GGG | + | chr4_3:51197787-51197806 | Msa0645770:intron | 20.0% |
| !! | TTATCATTATAAAATCGTGT+AGG | + | chr4_3:51198242-51198261 | Msa0645770:intron | 20.0% |
| !! | TTACATGGAAATTGAATATT+TGG | + | chr4_3:51198417-51198436 | Msa0645770:intron | 20.0% |
| !!! | TAATGTCAGAATCTTTTATT+TGG | + | chr4_3:51199422-51199441 | Msa0645770:intron | 20.0% |
| !! | TTGTTAAATGAAAAAGAGAT+AGG | - | chr4_3:51199567-51199586 | None:intergenic | 20.0% |
| !! | AAGAAATAAAAGACAAGATT+GGG | - | chr4_3:51199629-51199648 | None:intergenic | 20.0% |
| !! | TGCTATGAATTATTAATGAT+CGG | - | chr4_3:51199841-51199860 | None:intergenic | 20.0% |
| !!! | TGTTTTAATTAGAACAGTTA+TGG | + | chr4_3:51199901-51199920 | Msa0645770:intron | 20.0% |
| !! | GTAATAAATAGGGAATTTAT+TGG | + | chr4_3:51199949-51199968 | Msa0645770:intron | 20.0% |
| !! | TATTCTAATTACTATTTCGA+AGG | + | chr4_3:51200466-51200485 | Msa0645770:CDS | 20.0% |
| !!! | TTAAGCTCTAAACATATTTT+TGG | + | chr4_3:51200985-51201004 | Msa0645770:three_prime_UTR | 20.0% |
| !!! | ATCTTGTTGTTTCTTTACTT+TGG | - | chr4_3:51193779-51193798 | None:intergenic | 25.0% |
| ! | GCTAAAATGAACTATTTACT+CGG | - | chr4_3:51194613-51194632 | None:intergenic | 25.0% |
| !!! | TTTTAGCCTTTAAATGTATG+AGG | + | chr4_3:51194626-51194645 | Msa0645770:intron | 25.0% |
| ! | TAACATGTTAATTGACCTTA+AGG | + | chr4_3:51194964-51194983 | Msa0645770:CDS | 25.0% |
| !! | CTTGCTAACTTTAGAAAAAA+TGG | - | chr4_3:51195094-51195113 | None:intergenic | 25.0% |
| !!! | TTTCTAAAGTTAGCAAGATA+TGG | + | chr4_3:51195097-51195116 | Msa0645770:CDS | 25.0% |
| !! | TTTTTCCTCTAAACATTACT+AGG | - | chr4_3:51195207-51195226 | None:intergenic | 25.0% |
| ! | CTATAAGCTTCAATAAGAAA+GGG | - | chr4_3:51195376-51195395 | None:intergenic | 25.0% |
| ! | ACTATAAGCTTCAATAAGAA+AGG | - | chr4_3:51195377-51195396 | None:intergenic | 25.0% |
| ! | AATTTCAACTTCACTAAACT+GGG | + | chr4_3:51195460-51195479 | Msa0645770:intron | 25.0% |
| !! | ATTTTGTACTAAGAACTATC+TGG | + | chr4_3:51195523-51195542 | Msa0645770:intron | 25.0% |
| ! | GTATATATTGAATTCCAATG+AGG | + | chr4_3:51195891-51195910 | Msa0645770:intron | 25.0% |
| !!! | GAAATTTCTCTCACTTTTAT+TGG | + | chr4_3:51196018-51196037 | Msa0645770:CDS | 25.0% |
| !! | TATAGCATATCCGATATTTT+TGG | + | chr4_3:51196153-51196172 | Msa0645770:intron | 25.0% |
| !! | TTGTGATAGTTTTTCTCTTT+CGG | + | chr4_3:51196406-51196425 | Msa0645770:intron | 25.0% |
| !! | AAGGAAGGATTTCTATATTT+TGG | - | chr4_3:51196517-51196536 | None:intergenic | 25.0% |
| ! | AAAGTGGTTATATGAAAAGT+TGG | + | chr4_3:51196597-51196616 | Msa0645770:CDS | 25.0% |
| ! | AAGTGGTTATATGAAAAGTT+GGG | + | chr4_3:51196598-51196617 | Msa0645770:CDS | 25.0% |
| ! | TTTGAACTATTAGTGACAAT+TGG | + | chr4_3:51196808-51196827 | Msa0645770:intron | 25.0% |
| ! | ATTAGTGACAATTGGTTATA+TGG | + | chr4_3:51196816-51196835 | Msa0645770:intron | 25.0% |
| ! | TTAGTGACAATTGGTTATAT+GGG | + | chr4_3:51196817-51196836 | Msa0645770:intron | 25.0% |
| !! | GAAATTCAGTTTTTGATGAA+AGG | - | chr4_3:51197051-51197070 | None:intergenic | 25.0% |
| ! | ATATCACCTGATGAATAATT+TGG | - | chr4_3:51197078-51197097 | None:intergenic | 25.0% |
| !! | GTCTAAAGTAACATATATGA+AGG | - | chr4_3:51197153-51197172 | None:intergenic | 25.0% |
| !! | TCACTGATATTTGATAATAC+AGG | + | chr4_3:51197255-51197274 | Msa0645770:intron | 25.0% |
| !! | TGATATTTGATAATACAGGA+AGG | + | chr4_3:51197259-51197278 | Msa0645770:intron | 25.0% |
| ! | AGATGAATCTTTAGCTAAAT+GGG | - | chr4_3:51197311-51197330 | None:intergenic | 25.0% |
| ! | AAGATGAATCTTTAGCTAAA+TGG | - | chr4_3:51197312-51197331 | None:intergenic | 25.0% |
| ! | CGTGTTAAAATGTTTATATC+TGG | + | chr4_3:51197406-51197425 | Msa0645770:intron | 25.0% |
| ! | ATTAATGTGATAGAAACCTT+TGG | + | chr4_3:51197457-51197476 | Msa0645770:intron | 25.0% |
| ! | TTTATCCTGACATAAGTTTA+TGG | + | chr4_3:51197586-51197605 | Msa0645770:intron | 25.0% |
| ! | TTATCCTGACATAAGTTTAT+GGG | + | chr4_3:51197587-51197606 | Msa0645770:intron | 25.0% |
| !! | AATTTTGTGAGTACAAGAAA+AGG | - | chr4_3:51198040-51198059 | None:intergenic | 25.0% |
| !!! | AAGTGGACTTTCTTTTAAAA+AGG | + | chr4_3:51198067-51198086 | Msa0645770:intron | 25.0% |
| !!! | AGTGGACTTTCTTTTAAAAA+GGG | + | chr4_3:51198068-51198087 | Msa0645770:intron | 25.0% |
| ! | GTACATGGAAATTGAATATT+TGG | + | chr4_3:51198290-51198309 | Msa0645770:intron | 25.0% |
| ! | TTATCATTATAAAATCGCGT+AGG | + | chr4_3:51198369-51198388 | Msa0645770:intron | 25.0% |
| !!! | TTTTATTGGTTTTTCCTTTC+TGG | + | chr4_3:51198599-51198618 | Msa0645770:CDS | 25.0% |
| !! | GATTTGATAGTACTTATCTA+TGG | + | chr4_3:51198882-51198901 | Msa0645770:intron | 25.0% |
| ! | GTTAATTTATTCTAAGTGGT+TGG | + | chr4_3:51198917-51198936 | Msa0645770:intron | 25.0% |
| !!! | TGAAAATTGTTTTGGGAATT+TGG | + | chr4_3:51199029-51199048 | Msa0645770:intron | 25.0% |
| !!! | GAAAATTGTTTTGGGAATTT+GGG | + | chr4_3:51199030-51199049 | Msa0645770:intron | 25.0% |
| !!! | AAAATTGTTTTGGGAATTTG+GGG | + | chr4_3:51199031-51199050 | Msa0645770:intron | 25.0% |
| ! | AAGGGGTTTCAAAATATAAA+GGG | + | chr4_3:51199218-51199237 | Msa0645770:CDS | 25.0% |
| !!! | TGATTGGTCTATATTTTTCA+AGG | + | chr4_3:51199256-51199275 | Msa0645770:CDS | 25.0% |
| !!! | ATTTTTCAAGGTAAAAGATG+CGG | + | chr4_3:51199268-51199287 | Msa0645770:intron | 25.0% |
| !!! | CTTTTATTTGGTCTATGAAA+AGG | + | chr4_3:51199434-51199453 | Msa0645770:intron | 25.0% |
| !!! | TCAACTTTCTTTCTCTTTTT+TGG | - | chr4_3:51199479-51199498 | None:intergenic | 25.0% |
| ! | AAAAGAGAAAGAAAGTTGAA+AGG | + | chr4_3:51199480-51199499 | Msa0645770:intron | 25.0% |
| ! | GAAGAAATAAAAGACAAGAT+TGG | - | chr4_3:51199630-51199649 | None:intergenic | 25.0% |
| ! | AGAAAAAATGAGTTAGAACT+TGG | - | chr4_3:51199652-51199671 | None:intergenic | 25.0% |
| ! | TTTACTGTGATTTAGATTCT+TGG | + | chr4_3:51199766-51199785 | Msa0645770:intron | 25.0% |
| ! | GATCATTAATAATTCATAGC+AGG | + | chr4_3:51199840-51199859 | Msa0645770:intron | 25.0% |
| ! | ATTAATAATTCATAGCAGGT+CGG | + | chr4_3:51199844-51199863 | Msa0645770:intron | 25.0% |
| ! | AATAGGGAATTTATTGGAAA+AGG | + | chr4_3:51199955-51199974 | Msa0645770:intron | 25.0% |
| ! | ATAGGGAATTTATTGGAAAA+GGG | + | chr4_3:51199956-51199975 | Msa0645770:intron | 25.0% |
| !! | CTTTTCATATTGTATTTGTG+TGG | + | chr4_3:51200074-51200093 | Msa0645770:intron | 25.0% |
| ! | CAATATGAATCAGAAATTGA+TGG | + | chr4_3:51200434-51200453 | Msa0645770:CDS | 25.0% |
| !!! | ACCGTTTTTCTTTGTTTTAA+CGG | + | chr4_3:51200804-51200823 | Msa0645770:three_prime_UTR | 25.0% |
| ! | TGAGATATATGTAATGTACT+AGG | + | chr4_3:51200934-51200953 | Msa0645770:three_prime_UTR | 25.0% |
| TAAGCATCAAGAATAAGATC+AGG | + | chr4_3:51193650-51193669 | Msa0645770:five_prime_UTR | 30.0% | |
| AAGCATCAAGAATAAGATCA+GGG | + | chr4_3:51193651-51193670 | Msa0645770:five_prime_UTR | 30.0% | |
| !!! | AAGTTTTAGGGTTTGAATCT+TGG | - | chr4_3:51193950-51193969 | None:intergenic | 30.0% |
| ! | CTAAAACTACGCAAGTTTTA+GGG | - | chr4_3:51193962-51193981 | None:intergenic | 30.0% |
| AACATCCAAATAGAAAACGA+CGG | - | chr4_3:51194261-51194280 | None:intergenic | 30.0% | |
| !! | GATGTTGATAGTTCCAATAA+TGG | + | chr4_3:51194275-51194294 | Msa0645770:CDS | 30.0% |
| TCGTATAAGCTATTAGTTCA+AGG | + | chr4_3:51194314-51194333 | Msa0645770:CDS | 30.0% | |
| AAACAAAATCTCACTTTCCA+CGG | - | chr4_3:51194518-51194537 | None:intergenic | 30.0% | |
| GACAAACCTCATACATTTAA+AGG | - | chr4_3:51194635-51194654 | None:intergenic | 30.0% | |
| GGACAAAATTGACTAACAAA+AGG | - | chr4_3:51194708-51194727 | None:intergenic | 30.0% | |
| !! | CTGTCTTTTGTTGGTTAATT+TGG | + | chr4_3:51194735-51194754 | Msa0645770:intron | 30.0% |
| TTGAATGCTAATGACATTGA+TGG | + | chr4_3:51195007-51195026 | Msa0645770:CDS | 30.0% | |
| ATAGTCCTAGTAATGTTTAG+AGG | + | chr4_3:51195199-51195218 | Msa0645770:intron | 30.0% | |
| ATTCACTTGGTATGAAGAAA+TGG | - | chr4_3:51195419-51195438 | None:intergenic | 30.0% | |
| GAATTTCAACTTCACTAAAC+TGG | + | chr4_3:51195459-51195478 | Msa0645770:intron | 30.0% | |
| !! | ATCTCTGAAATCCACAATTA+CGG | + | chr4_3:51195613-51195632 | Msa0645770:intron | 30.0% |
| ! | TCCTAGTAGTCTTTTATATG+TGG | + | chr4_3:51195713-51195732 | Msa0645770:intron | 30.0% |
| !! | TATGTGGCATTGATTTACAT+TGG | + | chr4_3:51195729-51195748 | Msa0645770:intron | 30.0% |
| TTTCAGTTTATTATAGGGAC+TGG | + | chr4_3:51195766-51195785 | Msa0645770:intron | 30.0% | |
| AGAAGCCTTAAATTTCCAAA+CGG | + | chr4_3:51195849-51195868 | Msa0645770:CDS | 30.0% | |
| AGAAACCGTTTGGAAATTTA+AGG | - | chr4_3:51195857-51195876 | None:intergenic | 30.0% | |
| !! | TGTTTTATTACTTCATCTGC+AGG | + | chr4_3:51195958-51195977 | Msa0645770:intron | 30.0% |
| AGAAATTTCCAGAACTTCAT+AGG | - | chr4_3:51196007-51196026 | None:intergenic | 30.0% | |
| !! | TTTCTCTCACTTTTATTGGA+AGG | + | chr4_3:51196022-51196041 | Msa0645770:CDS | 30.0% |
| TTACTTAGTTAGTTACCTTG+CGG | + | chr4_3:51196354-51196373 | Msa0645770:intron | 30.0% | |
| ! | AAGGGATAATTGAAGTATCT+GGG | - | chr4_3:51196625-51196644 | None:intergenic | 30.0% |
| ! | TAAGGGATAATTGAAGTATC+TGG | - | chr4_3:51196626-51196645 | None:intergenic | 30.0% |
| TAGTGACAATTGGTTATATG+GGG | + | chr4_3:51196818-51196837 | Msa0645770:intron | 30.0% | |
| TTGTATGTATGAGAATTCTG+GGG | - | chr4_3:51196935-51196954 | None:intergenic | 30.0% | |
| CTTGTATGTATGAGAATTCT+GGG | - | chr4_3:51196936-51196955 | None:intergenic | 30.0% | |
| ACTTGTATGTATGAGAATTC+TGG | - | chr4_3:51196937-51196956 | None:intergenic | 30.0% | |
| ATAGAAACCTTTGGTTGAAA+TGG | + | chr4_3:51197466-51197485 | Msa0645770:intron | 30.0% | |
| ATGACTTAGAGCATATTGTT+TGG | + | chr4_3:51197490-51197509 | Msa0645770:intron | 30.0% | |
| TAGGTCTTTACTATTGTTGT+TGG | - | chr4_3:51197615-51197634 | None:intergenic | 30.0% | |
| GTACAAGATAAATATAAGGG+TGG | + | chr4_3:51197790-51197809 | Msa0645770:intron | 30.0% | |
| TCAGTTCACTTTCATACTAA+AGG | - | chr4_3:51197872-51197891 | None:intergenic | 30.0% | |
| TCTTGTACTCACAAAATTGA+TGG | + | chr4_3:51198042-51198061 | Msa0645770:intron | 30.0% | |
| CTTGTACTCACAAAATTGAT+GGG | + | chr4_3:51198043-51198062 | Msa0645770:intron | 30.0% | |
| CATGGAAATTGAATATTTGG+TGG | + | chr4_3:51198293-51198312 | Msa0645770:intron | 30.0% | |
| ! | GGTGTATTTGTTAACTATTC+TGG | + | chr4_3:51198314-51198333 | Msa0645770:intron | 30.0% |
| CAATTTCCATGTAAGATGTA+TGG | - | chr4_3:51198411-51198430 | None:intergenic | 30.0% | |
| CATGGAAATTGAATATTTGG+TGG | + | chr4_3:51198293-51198312 | Msa0645770:intron | 30.0% | |
| !!! | GGCTGGTTTTTTTGTTTTAT+TGG | + | chr4_3:51198585-51198604 | Msa0645770:CDS | 30.0% |
| !! | ATATAAAAGTGCTTCCAGAA+AGG | - | chr4_3:51198616-51198635 | None:intergenic | 30.0% |
| ATTTAGAGAACTTTGTCTTC+TGG | + | chr4_3:51198758-51198777 | Msa0645770:intron | 30.0% | |
| AATTTATTCTAAGTGGTTGG+TGG | + | chr4_3:51198920-51198939 | Msa0645770:intron | 30.0% | |
| ! | TGGTTTATTTCTTAGCCATA+AGG | + | chr4_3:51198945-51198964 | Msa0645770:intron | 30.0% |
| TTGCAATTACAGTTCATCTA+TGG | + | chr4_3:51199192-51199211 | Msa0645770:CDS | 30.0% | |
| CAAGGGGTTTCAAAATATAA+AGG | + | chr4_3:51199217-51199236 | Msa0645770:CDS | 30.0% | |
| GTTTCAAAATATAAAGGGAC+TGG | + | chr4_3:51199223-51199242 | Msa0645770:CDS | 30.0% | |
| !!! | TTTTTCAAGGTAAAAGATGC+GGG | + | chr4_3:51199269-51199288 | Msa0645770:intron | 30.0% |
| !!! | TTGTTTTGGGAGAAAATGAA+GGG | - | chr4_3:51199690-51199709 | None:intergenic | 30.0% |
| !!! | TTTGTTTTGGGAGAAAATGA+AGG | - | chr4_3:51199691-51199710 | None:intergenic | 30.0% |
| ! | TTCATTTTCTCCCAAAACAA+AGG | + | chr4_3:51199690-51199709 | Msa0645770:intron | 30.0% |
| GTTGCCTGTTTATTGAAATA+GGG | + | chr4_3:51199866-51199885 | Msa0645770:intron | 30.0% | |
| GAATTTATTGGAAAAGGGAA+GGG | + | chr4_3:51199961-51199980 | Msa0645770:intron | 30.0% | |
| AATTTATTGGAAAAGGGAAG+GGG | + | chr4_3:51199962-51199981 | Msa0645770:intron | 30.0% | |
| TTGGTTATCTGGATTTAAGA+GGG | + | chr4_3:51199985-51200004 | Msa0645770:intron | 30.0% | |
| CAAGTATCCTTCTGTAATAA+TGG | - | chr4_3:51200131-51200150 | None:intergenic | 30.0% | |
| TTGATAGAAACAACTTCAGA+AGG | - | chr4_3:51200264-51200283 | None:intergenic | 30.0% | |
| AAGTTGTTGACAACATTGAT+AGG | + | chr4_3:51200283-51200302 | Msa0645770:CDS | 30.0% | |
| !! | TCTTTCCCCATTTTTCTAAA+GGG | - | chr4_3:51200684-51200703 | None:intergenic | 30.0% |
| !! | ATCTTTCCCCATTTTTCTAA+AGG | - | chr4_3:51200685-51200704 | None:intergenic | 30.0% |
| CAATTGTGATTACAGAAGTT+AGG | - | chr4_3:51200744-51200763 | None:intergenic | 30.0% | |
| TTCTGTAATCACAATTGAAC+CGG | + | chr4_3:51200747-51200766 | Msa0645770:three_prime_UTR | 30.0% | |
| CCCGTTAAAACAAAGAAAAA+CGG | - | chr4_3:51200808-51200827 | None:intergenic | 30.0% | |
| !!! | CCGTTTTTCTTTGTTTTAAC+GGG | + | chr4_3:51200805-51200824 | Msa0645770:three_prime_UTR | 30.0% |
| TCTTGCCAGTAAAAAATTTG+AGG | + | chr4_3:51200901-51200920 | Msa0645770:three_prime_UTR | 30.0% | |
| ! | GACTAGAATCTTTTGGACAA+GGG | - | chr4_3:51193716-51193735 | None:intergenic | 35.0% |
| ! | CCTAAAACTACGCAAGTTTT+AGG | - | chr4_3:51193963-51193982 | None:intergenic | 35.0% |
| ! | CCTAAAACTTGCGTAGTTTT+AGG | + | chr4_3:51193960-51193979 | Msa0645770:CDS | 35.0% |
| !!! | AAAACTTGCGTAGTTTTAGG+CGG | + | chr4_3:51193963-51193982 | Msa0645770:CDS | 35.0% |
| ! | TTGGATAGAGTGAGTTGAAT+CGG | - | chr4_3:51194057-51194076 | None:intergenic | 35.0% |
| !!! | TTGTTTTGTGCAGTTCTAGA+AGG | + | chr4_3:51194230-51194249 | Msa0645770:intron | 35.0% |
| !! | TTCTTCCGTCGTTTTCTATT+TGG | + | chr4_3:51194253-51194272 | Msa0645770:CDS | 35.0% |
| ! | TTGTTGGTTAATTTGGTCCT+CGG | + | chr4_3:51194742-51194761 | Msa0645770:intron | 35.0% |
| GTGTCTTTCATTACTCAGTT+TGG | + | chr4_3:51194767-51194786 | Msa0645770:intron | 35.0% | |
| TCATTACTCAGTTTGGTCTA+TGG | + | chr4_3:51194774-51194793 | Msa0645770:intron | 35.0% | |
| ! | TGCTATTTGAAGACACACTT+AGG | + | chr4_3:51194801-51194820 | Msa0645770:intron | 35.0% |
| GCTATTTGAAGACACACTTA+GGG | + | chr4_3:51194802-51194821 | Msa0645770:intron | 35.0% | |
| ATACACTCAGAGACTATAGT+GGG | + | chr4_3:51194842-51194861 | Msa0645770:intron | 35.0% | |
| ! | TTTTGATCCCTATATGTCTG+AGG | - | chr4_3:51194874-51194893 | None:intergenic | 35.0% |
| AGCAAGATATGGTTTCACAA+AGG | + | chr4_3:51195108-51195127 | Msa0645770:CDS | 35.0% | |
| TCTGTAGACAAGTATTCACT+TGG | - | chr4_3:51195432-51195451 | None:intergenic | 35.0% | |
| CATACAAACTCTTGTACTTG+AGG | + | chr4_3:51195588-51195607 | Msa0645770:intron | 35.0% | |
| ATAATCACTGCTAATCAAGG+AGG | - | chr4_3:51195641-51195660 | None:intergenic | 35.0% | |
| CCAATAATCACTGCTAATCA+AGG | - | chr4_3:51195644-51195663 | None:intergenic | 35.0% | |
| CCTTGATTAGCAGTGATTAT+TGG | + | chr4_3:51195641-51195660 | Msa0645770:intron | 35.0% | |
| AAACTTTGAACTCAGCTTCA+TGG | - | chr4_3:51195694-51195713 | None:intergenic | 35.0% | |
| GCCACATATAAAAGACTACT+AGG | - | chr4_3:51195717-51195736 | None:intergenic | 35.0% | |
| AAATTTCCAAACGGTTTCTG+TGG | + | chr4_3:51195858-51195877 | Msa0645770:CDS | 35.0% | |
| AGCAGTTAATACAACCTCAT+TGG | - | chr4_3:51195908-51195927 | None:intergenic | 35.0% | |
| !! | TCACTTTTATTGGAAGGTCT+TGG | + | chr4_3:51196028-51196047 | Msa0645770:CDS | 35.0% |
| TGTAATCTGCTCATATCGTT+AGG | + | chr4_3:51196202-51196221 | Msa0645770:intron | 35.0% | |
| GTTAGGAAAAATATAGCCAC+TGG | + | chr4_3:51196219-51196238 | Msa0645770:intron | 35.0% | |
| AACAAAACTAAAACACCGCA+AGG | - | chr4_3:51196372-51196391 | None:intergenic | 35.0% | |
| GAAATCCTTCCTTTAATTGC+AGG | + | chr4_3:51196524-51196543 | Msa0645770:intron | 35.0% | |
| GAGAACGTATTGCACTAAAT+TGG | - | chr4_3:51196569-51196588 | None:intergenic | 35.0% | |
| !!! | ACGTTCTCTCAGTTTTAAAG+TGG | + | chr4_3:51196581-51196600 | Msa0645770:CDS | 35.0% |
| ! | GCTTCCTTTTTGATACTGTT+TGG | + | chr4_3:51196908-51196927 | Msa0645770:intron | 35.0% |
| TCGCTTCCAAATTATTCATC+AGG | + | chr4_3:51197069-51197088 | Msa0645770:intron | 35.0% | |
| GAAAATAAAGTGGCTGCTAA+TGG | - | chr4_3:51197131-51197150 | None:intergenic | 35.0% | |
| ! | TTTTTGCCTGCGTCTATTTA+TGG | + | chr4_3:51197197-51197216 | Msa0645770:intron | 35.0% |
| TATGTACCATAAATAGACGC+AGG | - | chr4_3:51197206-51197225 | None:intergenic | 35.0% | |
| TAAATGGGAGAATGACTCTA+TGG | - | chr4_3:51197296-51197315 | None:intergenic | 35.0% | |
| !!! | CTTTTTCAAGATGCTGTGAT+CGG | + | chr4_3:51197329-51197348 | Msa0645770:CDS | 35.0% |
| AGTCATTCCATTTCAACCAA+AGG | - | chr4_3:51197476-51197495 | None:intergenic | 35.0% | |
| GTTTGGTATATCTTACTGCA+TGG | + | chr4_3:51197507-51197526 | Msa0645770:intron | 35.0% | |
| GTATATCTTACTGCATGGAT+TGG | + | chr4_3:51197512-51197531 | Msa0645770:intron | 35.0% | |
| TTATGTCAGGATAAACTTGC+AGG | - | chr4_3:51197581-51197600 | None:intergenic | 35.0% | |
| TAGTAAAGACCTAAGCTTGT+AGG | + | chr4_3:51197622-51197641 | Msa0645770:intron | 35.0% | |
| CCAATACACAAACAAGAGTA+CGG | - | chr4_3:51197771-51197790 | None:intergenic | 35.0% | |
| GTTCACTTTCATACTAAAGG+AGG | - | chr4_3:51197869-51197888 | None:intergenic | 35.0% | |
| TCACAAAATTGATGGGAAAG+TGG | + | chr4_3:51198050-51198069 | Msa0645770:intron | 35.0% | |
| AACCTCTAGTGTGAAAAACA+GGG | - | chr4_3:51198165-51198184 | None:intergenic | 35.0% | |
| TTTGAGTCATACATCGTACA+TGG | + | chr4_3:51198275-51198294 | Msa0645770:intron | 35.0% | |
| TTCTGTCACATGACAATGAA+TGG | + | chr4_3:51198338-51198357 | Msa0645770:intron | 35.0% | |
| TCTGTCACATGACAATGAAT+GGG | + | chr4_3:51198339-51198358 | Msa0645770:intron | 35.0% | |
| TTTGAGCCATACATCTTACA+TGG | + | chr4_3:51198402-51198421 | Msa0645770:intron | 35.0% | |
| ! | GGTGTGTTTGTTAACTATTC+TGG | + | chr4_3:51198441-51198460 | Msa0645770:intron | 35.0% |
| CGGTGCACAATTTCATTATT+CGG | - | chr4_3:51198497-51198516 | None:intergenic | 35.0% | |
| AAAACAAAAAAACCAGCCCA+AGG | - | chr4_3:51198583-51198602 | None:intergenic | 35.0% | |
| ! | CTTTTATATCATCTGCTGCA+AGG | + | chr4_3:51198627-51198646 | Msa0645770:CDS | 35.0% |
| CTTGTGACTTTACTTCTATG+TGG | + | chr4_3:51198659-51198678 | Msa0645770:CDS | 35.0% | |
| ACTTTACTTCTATGTGGACA+TGG | + | chr4_3:51198665-51198684 | Msa0645770:CDS | 35.0% | |
| CTGCAAAAGATTTAACCAGA+AGG | - | chr4_3:51198857-51198876 | None:intergenic | 35.0% | |
| ! | GTGAGATATAAGTAGCCTTA+TGG | - | chr4_3:51198963-51198982 | None:intergenic | 35.0% |
| !! | GATTTTTCAGTGACCTATGA+AGG | - | chr4_3:51199074-51199093 | None:intergenic | 35.0% |
| !! | TTCTATATACAGAAAGTGCC+TGG | + | chr4_3:51199128-51199147 | Msa0645770:CDS | 35.0% |
| !! | TCTATATACAGAAAGTGCCT+GGG | + | chr4_3:51199129-51199148 | Msa0645770:CDS | 35.0% |
| GAGATCTTAAAATTAGACCC+AGG | - | chr4_3:51199149-51199168 | None:intergenic | 35.0% | |
| TACAGTTCATCTATGGAACA+AGG | + | chr4_3:51199199-51199218 | Msa0645770:CDS | 35.0% | |
| ACAGTTCATCTATGGAACAA+GGG | + | chr4_3:51199200-51199219 | Msa0645770:CDS | 35.0% | |
| CAAAACTCTCTCATTTGTGA+TGG | + | chr4_3:51199584-51199603 | Msa0645770:intron | 35.0% | |
| !!! | TGTTTTGGGAGAAAATGAAG+GGG | - | chr4_3:51199689-51199708 | None:intergenic | 35.0% |
| GGTTGCCTGTTTATTGAAAT+AGG | + | chr4_3:51199865-51199884 | Msa0645770:intron | 35.0% | |
| ACTGCCCTATTTCAATAAAC+AGG | - | chr4_3:51199873-51199892 | None:intergenic | 35.0% | |
| GGAATTTATTGGAAAAGGGA+AGG | + | chr4_3:51199960-51199979 | Msa0645770:intron | 35.0% | |
| GTTGGTTATCTGGATTTAAG+AGG | + | chr4_3:51199984-51200003 | Msa0645770:intron | 35.0% | |
| !! | AAGCTCTCTAAAACTTGGAA+GGG | + | chr4_3:51200016-51200035 | Msa0645770:intron | 35.0% |
| TGCTGTTCCATTATTACAGA+AGG | + | chr4_3:51200121-51200140 | Msa0645770:intron | 35.0% | |
| GTGAAGGAAAAGAATCTGTT+AGG | - | chr4_3:51200201-51200220 | None:intergenic | 35.0% | |
| TTGACAACATTGATAGGTGT+AGG | + | chr4_3:51200289-51200308 | Msa0645770:CDS | 35.0% | |
| AACATTGATAGGTGTAGGTA+TGG | + | chr4_3:51200294-51200313 | Msa0645770:intron | 35.0% | |
| !! | ATCAGAAATTGATGGACTTG+CGG | + | chr4_3:51200442-51200461 | Msa0645770:CDS | 35.0% |
| TCTGATCTTTGACATCCTAT+AGG | + | chr4_3:51200627-51200646 | Msa0645770:three_prime_UTR | 35.0% | |
| ! | TTGTGCCCCTTTAGAAAAAT+GGG | + | chr4_3:51200675-51200694 | Msa0645770:three_prime_UTR | 35.0% |
| !! | CTTTCCCCATTTTTCTAAAG+GGG | - | chr4_3:51200683-51200702 | None:intergenic | 35.0% |
| TGTGATTACAGAAGTTAGGA+CGG | - | chr4_3:51200740-51200759 | None:intergenic | 35.0% | |
| !!! | GTGAGCCTCAAATTTTTTAC+TGG | - | chr4_3:51200909-51200928 | None:intergenic | 35.0% |
| TTGTGCATTTCTTTACCGAA+TGG | + | chr4_3:51201018-51201037 | Msa0645770:three_prime_UTR | 35.0% | |
| TGTGCATTTCTTTACCGAAT+GGG | + | chr4_3:51201019-51201038 | Msa0645770:three_prime_UTR | 35.0% | |
| ! | GAATCTTTTGGACAAGGGAA+TGG | - | chr4_3:51193711-51193730 | None:intergenic | 40.0% |
| ! | GGACTAGAATCTTTTGGACA+AGG | - | chr4_3:51193717-51193736 | None:intergenic | 40.0% |
| TCCAAAAGATTCTAGTCCCA+GGG | + | chr4_3:51193719-51193738 | Msa0645770:five_prime_UTR | 40.0% | |
| !! | GTTGTTTCTTTACTTTGGCG+CGG | - | chr4_3:51193774-51193793 | None:intergenic | 40.0% |
| GTTTGAATCTTGGAAGCGAT+CGG | - | chr4_3:51193940-51193959 | None:intergenic | 40.0% | |
| GTCTTACAGCTCTTGAAACT+CGG | + | chr4_3:51194011-51194030 | Msa0645770:CDS | 40.0% | |
| GTCGATTGAACGATTACCTT+CGG | - | chr4_3:51194171-51194190 | None:intergenic | 40.0% | |
| CGTAATTCTGATACACGTTC+AGG | - | chr4_3:51194667-51194686 | None:intergenic | 40.0% | |
| CCAACAAAAGACAGTTTACG+AGG | - | chr4_3:51194729-51194748 | None:intergenic | 40.0% | |
| ! | CCTCGTAAACTGTCTTTTGT+TGG | + | chr4_3:51194726-51194745 | Msa0645770:intron | 40.0% |
| ! | GACACACTTAGGGATGTTTT+TGG | + | chr4_3:51194812-51194831 | Msa0645770:intron | 40.0% |
| GATACACTCAGAGACTATAG+TGG | + | chr4_3:51194841-51194860 | Msa0645770:intron | 40.0% | |
| AAAAGGGAGATGTGAATTGC+AGG | + | chr4_3:51194937-51194956 | Msa0645770:intron | 40.0% | |
| CTTCGTCCTAGTAATGTGTT+TGG | + | chr4_3:51195046-51195065 | Msa0645770:CDS | 40.0% | |
| ATTCTCAGAGAAGGTGAAGT+CGG | - | chr4_3:51195803-51195822 | None:intergenic | 40.0% | |
| ATGAGCAACATTCTCAGAGA+AGG | - | chr4_3:51195812-51195831 | None:intergenic | 40.0% | |
| TGGAAGGTCTTGGATATCAA+AGG | + | chr4_3:51196038-51196057 | Msa0645770:CDS | 40.0% | |
| GAAAAATTTGTGACAGCCAG+TGG | - | chr4_3:51196238-51196257 | None:intergenic | 40.0% | |
| AATGGCCTGCAATTAAAGGA+AGG | - | chr4_3:51196532-51196551 | None:intergenic | 40.0% | |
| GATGAATGGCCTGCAATTAA+AGG | - | chr4_3:51196536-51196555 | None:intergenic | 40.0% | |
| ACGTATTGCACTAAATTGGC+AGG | - | chr4_3:51196565-51196584 | None:intergenic | 40.0% | |
| TAAACCTCAAGGGAGACTAT+CGG | - | chr4_3:51196727-51196746 | None:intergenic | 40.0% | |
| CAGGCAGATTTAAACCTCAA+GGG | - | chr4_3:51196737-51196756 | None:intergenic | 40.0% | |
| ACAGGCAGATTTAAACCTCA+AGG | - | chr4_3:51196738-51196757 | None:intergenic | 40.0% | |
| GGGTCCAAACAGTATCAAAA+AGG | - | chr4_3:51196915-51196934 | None:intergenic | 40.0% | |
| TCAAAAGCAGATAAGCTGCT+TGG | + | chr4_3:51197352-51197371 | Msa0645770:CDS | 40.0% | |
| ! | CCGTACTCTTGTTTGTGTAT+TGG | + | chr4_3:51197768-51197787 | Msa0645770:intron | 40.0% |
| TGAAGGGGTAATAGAAACGA+GGG | - | chr4_3:51197947-51197966 | None:intergenic | 40.0% | |
| TTGAAGGGGTAATAGAAACG+AGG | - | chr4_3:51197948-51197967 | None:intergenic | 40.0% | |
| ACATTACAGATGCAACCTGA+GGG | - | chr4_3:51197977-51197996 | None:intergenic | 40.0% | |
| TACATTACAGATGCAACCTG+AGG | - | chr4_3:51197978-51197997 | None:intergenic | 40.0% | |
| GTGTACAACACACAAATGGT+GGG | - | chr4_3:51198135-51198154 | None:intergenic | 40.0% | |
| TGTGTACAACACACAAATGG+TGG | - | chr4_3:51198136-51198155 | None:intergenic | 40.0% | |
| CTAGTGTGAAAAACAGGGAA+AGG | - | chr4_3:51198160-51198179 | None:intergenic | 40.0% | |
| !! | TTCCCTGTTTTTCACACTAG+AGG | + | chr4_3:51198160-51198179 | Msa0645770:intron | 40.0% |
| CAACCTCTAGTGTGAAAAAC+AGG | - | chr4_3:51198166-51198185 | None:intergenic | 40.0% | |
| TCATGTGACTGAAAGGTCAT+GGG | - | chr4_3:51198204-51198223 | None:intergenic | 40.0% | |
| TTCGTTGTCATGTGACTGAA+AGG | - | chr4_3:51198211-51198230 | None:intergenic | 40.0% | |
| TTCAGTCACATGACAACGAA+TGG | + | chr4_3:51198211-51198230 | Msa0645770:intron | 40.0% | |
| TCAGTCACATGACAACGAAT+GGG | + | chr4_3:51198212-51198231 | Msa0645770:intron | 40.0% | |
| CAGCCACTGTAACAATAAAG+CGG | - | chr4_3:51198517-51198536 | None:intergenic | 40.0% | |
| ! | TTTGTTGTGGAGAAACGAGA+AGG | + | chr4_3:51198541-51198560 | Msa0645770:CDS | 40.0% |
| CAACAGCTGAATAACAGAAC+AGG | - | chr4_3:51198816-51198835 | None:intergenic | 40.0% | |
| CTGTTCTGTTATTCAGCTGT+TGG | + | chr4_3:51198814-51198833 | Msa0645770:intron | 40.0% | |
| !! | CTCTATGCTTTTTGTCCTTC+TGG | + | chr4_3:51198839-51198858 | Msa0645770:intron | 40.0% |
| !! | ATTCTAAGTGGTTGGTGGTA+TGG | + | chr4_3:51198925-51198944 | Msa0645770:intron | 40.0% |
| !! | TTAGCAGTAGCACTGATTTG+TGG | - | chr4_3:51198985-51199004 | None:intergenic | 40.0% |
| ! | ATCAGTGCTACTGCTAAGTT+CGG | + | chr4_3:51198988-51199007 | Msa0645770:intron | 40.0% |
| !! | TTTTGGGAATTTGGGGTAAC+AGG | + | chr4_3:51199038-51199057 | Msa0645770:intron | 40.0% |
| GAAACCAAATCTGCAGCAAA+TGG | - | chr4_3:51199111-51199130 | None:intergenic | 40.0% | |
| CAGTTCATCTATGGAACAAG+GGG | + | chr4_3:51199201-51199220 | Msa0645770:CDS | 40.0% | |
| TATAGACCAATCATCCCCTT+GGG | - | chr4_3:51199249-51199268 | None:intergenic | 40.0% | |
| ATATAGACCAATCATCCCCT+TGG | - | chr4_3:51199250-51199269 | None:intergenic | 40.0% | |
| GATGGAAGAAAAAGATGCCA+TGG | + | chr4_3:51199602-51199621 | Msa0645770:intron | 40.0% | |
| AAAAGACAAGATTGGGTCCA+TGG | - | chr4_3:51199622-51199641 | None:intergenic | 40.0% | |
| !! | TTTTGGGAGAAAATGAAGGG+GGG | - | chr4_3:51199687-51199706 | None:intergenic | 40.0% |
| !!! | GTTTTGGGAGAAAATGAAGG+GGG | - | chr4_3:51199688-51199707 | None:intergenic | 40.0% |
| ! | TTTTCTCCCAAAACAAAGGC+AGG | + | chr4_3:51199694-51199713 | Msa0645770:intron | 40.0% |
| !!! | TCTAAGCCTGCCTTTGTTTT+GGG | - | chr4_3:51199703-51199722 | None:intergenic | 40.0% |
| GGCAGTCTGGAAAGATTTAA+CGG | + | chr4_3:51199725-51199744 | Msa0645770:intron | 40.0% | |
| !! | GATCCAAGCTCTCTAAAACT+TGG | + | chr4_3:51200011-51200030 | Msa0645770:intron | 40.0% |
| !!! | CTTCCAAGTTTTAGAGAGCT+TGG | - | chr4_3:51200017-51200036 | None:intergenic | 40.0% |
| !! | CAAGCTCTCTAAAACTTGGA+AGG | + | chr4_3:51200015-51200034 | Msa0645770:intron | 40.0% |
| ! | CTGTAATAATGGAACAGCAC+AGG | - | chr4_3:51200120-51200139 | None:intergenic | 40.0% |
| ! | ACAGATTCTTTTCCTTCACG+TGG | + | chr4_3:51200202-51200221 | Msa0645770:CDS | 40.0% |
| TGGCATACCTAAAACATTGC+AGG | + | chr4_3:51200222-51200241 | Msa0645770:CDS | 40.0% | |
| CCTGCACAAAAATTCAGTCA+GGG | - | chr4_3:51200377-51200396 | None:intergenic | 40.0% | |
| ACCTGCACAAAAATTCAGTC+AGG | - | chr4_3:51200378-51200397 | None:intergenic | 40.0% | |
| ! | ACTGAATTTTTGTGCAGGTC+TGG | + | chr4_3:51200379-51200398 | Msa0645770:intron | 40.0% |
| TACTATTTCGAAGGAGTTCG+TGG | + | chr4_3:51200475-51200494 | Msa0645770:CDS | 40.0% | |
| !! | ACTTACCTGTTTCTGTATCG+CGG | + | chr4_3:51200513-51200532 | Msa0645770:CDS | 40.0% |
| TTTCAGCATTACCAAGAACC+AGG | + | chr4_3:51200557-51200576 | Msa0645770:CDS | 40.0% | |
| AGATAGCCAAACAGAGGTTT+CGG | + | chr4_3:51200596-51200615 | Msa0645770:exon | 40.0% | |
| TTTGACATCCTATAGGCTGT+AGG | + | chr4_3:51200634-51200653 | Msa0645770:three_prime_UTR | 40.0% | |
| ! | GTTGTGCCCCTTTAGAAAAA+TGG | + | chr4_3:51200674-51200693 | Msa0645770:three_prime_UTR | 40.0% |
| ! | TGTGCCCCTTTAGAAAAATG+GGG | + | chr4_3:51200676-51200695 | Msa0645770:three_prime_UTR | 40.0% |
| TGATTACAGAAGTTAGGACG+GGG | - | chr4_3:51200738-51200757 | None:intergenic | 40.0% | |
| GTGATTACAGAAGTTAGGAC+GGG | - | chr4_3:51200739-51200758 | None:intergenic | 40.0% | |
| ACAATTGAACCGGTGAGTTA+AGG | + | chr4_3:51200757-51200776 | Msa0645770:three_prime_UTR | 40.0% | |
| GTGCATTTCTTTACCGAATG+GGG | + | chr4_3:51201020-51201039 | Msa0645770:three_prime_UTR | 40.0% | |
| ATTTCTTTACCGAATGGGGT+TGG | + | chr4_3:51201024-51201043 | Msa0645770:three_prime_UTR | 40.0% | |
| GTCCAAAAGATTCTAGTCCC+AGG | + | chr4_3:51193718-51193737 | Msa0645770:five_prime_UTR | 45.0% | |
| CCAAAAGATTCTAGTCCCAG+GGG | + | chr4_3:51193720-51193739 | Msa0645770:five_prime_UTR | 45.0% | |
| ! | ATGTGAGTGGTACTGAGAGT+GGG | - | chr4_3:51193748-51193767 | None:intergenic | 45.0% |
| ! | AATGTGAGTGGTACTGAGAG+TGG | - | chr4_3:51193749-51193768 | None:intergenic | 45.0% |
| GAGAGAGAGGTAGTTACTTG+AGG | - | chr4_3:51193812-51193831 | None:intergenic | 45.0% | |
| TCGTTTCACAGTCGCATCAA+TGG | + | chr4_3:51193905-51193924 | Msa0645770:intron | 45.0% | |
| TTTCACAGTCGCATCAATGG+CGG | + | chr4_3:51193908-51193927 | Msa0645770:intron | 45.0% | |
| TTAGGCGGAAGAGGATTCAT+CGG | + | chr4_3:51193978-51193997 | Msa0645770:CDS | 45.0% | |
| AGCTCTTGAAACTCGGTAAC+TGG | + | chr4_3:51194018-51194037 | Msa0645770:CDS | 45.0% | |
| GCAGAAATCGTCGCCATTAT+TGG | - | chr4_3:51194291-51194310 | None:intergenic | 45.0% | |
| GTTTGATCGAGATAAACCGC+TGG | + | chr4_3:51194487-51194506 | Msa0645770:CDS | 45.0% | |
| AGTAATGAAAGACACGTCCG+AGG | - | chr4_3:51194762-51194781 | None:intergenic | 45.0% | |
| GACACCACCTCAGACATATA+GGG | + | chr4_3:51194864-51194883 | Msa0645770:intron | 45.0% | |
| TGATCCCTATATGTCTGAGG+TGG | - | chr4_3:51194871-51194890 | None:intergenic | 45.0% | |
| AAGCTTCTGCTTGAGCCTTA+AGG | - | chr4_3:51194982-51195001 | None:intergenic | 45.0% | |
| CCAGGACCAAACACATTACT+AGG | - | chr4_3:51195055-51195074 | None:intergenic | 45.0% | |
| CCTAGTAATGTGTTTGGTCC+TGG | + | chr4_3:51195052-51195071 | Msa0645770:CDS | 45.0% | |
| TCAAGGAGGATCCGTAATTG+TGG | - | chr4_3:51195627-51195646 | None:intergenic | 45.0% | |
| GGCTTCTTCTGCACAGATAT+GGG | - | chr4_3:51195836-51195855 | None:intergenic | 45.0% | |
| AGGCTTCTTCTGCACAGATA+TGG | - | chr4_3:51195837-51195856 | None:intergenic | 45.0% | |
| ATCTCGAGCCTATGAAGTTC+TGG | + | chr4_3:51195996-51196015 | Msa0645770:CDS | 45.0% | |
| TTGGCAGGAAGCTTGATGAA+TGG | - | chr4_3:51196550-51196569 | None:intergenic | 45.0% | |
| TGCTGAGCAGTTGAAAGTTC+GGG | - | chr4_3:51196680-51196699 | None:intergenic | 45.0% | |
| CTGCTGAGCAGTTGAAAGTT+CGG | - | chr4_3:51196681-51196700 | None:intergenic | 45.0% | |
| GGTGCCCATAAACTTATGTC+AGG | - | chr4_3:51197594-51197613 | None:intergenic | 45.0% | |
| ACCTAAGCTTGTAGGCTTGT+TGG | + | chr4_3:51197630-51197649 | Msa0645770:intron | 45.0% | |
| ! | CCTAAGCTTGTAGGCTTGTT+GGG | + | chr4_3:51197631-51197650 | Msa0645770:intron | 45.0% |
| GCTCATAGGTGGAAGAACAT+GGG | - | chr4_3:51197908-51197927 | None:intergenic | 45.0% | |
| TGCTCATAGGTGGAAGAACA+TGG | - | chr4_3:51197909-51197928 | None:intergenic | 45.0% | |
| ! | ACCTGAGGGTATGCTTTGAA+GGG | - | chr4_3:51197963-51197982 | None:intergenic | 45.0% |
| ! | AACCTGAGGGTATGCTTTGA+AGG | - | chr4_3:51197964-51197983 | None:intergenic | 45.0% |
| GGCTGTGTACAACACACAAA+TGG | - | chr4_3:51198139-51198158 | None:intergenic | 45.0% | |
| ! | TCACACTAGAGGTTGTTTCC+AGG | + | chr4_3:51198171-51198190 | Msa0645770:intron | 45.0% |
| GTCATGTGACTGAAAGGTCA+TGG | - | chr4_3:51198205-51198224 | None:intergenic | 45.0% | |
| ! | GCACCGCTTTATTGTTACAG+TGG | + | chr4_3:51198511-51198530 | Msa0645770:intron | 45.0% |
| ! | CAGTGGCTGACATTTTGTTG+TGG | + | chr4_3:51198528-51198547 | Msa0645770:intron | 45.0% |
| ! | GCATACACGTACAGCTTTGA+CGG | - | chr4_3:51198698-51198717 | None:intergenic | 45.0% |
| GAACTTTGTCTTCTGGACAC+TGG | + | chr4_3:51198765-51198784 | Msa0645770:intron | 45.0% | |
| ! | TCAGTGCTACTGCTAAGTTC+GGG | + | chr4_3:51198989-51199008 | Msa0645770:intron | 45.0% |
| ! | ACGACCATTTGCTGCAGATT+TGG | + | chr4_3:51199104-51199123 | Msa0645770:intron | 45.0% |
| !! | AATATAAAGGGACTGGCCCA+AGG | + | chr4_3:51199230-51199249 | Msa0645770:CDS | 45.0% |
| !! | ATATAAAGGGACTGGCCCAA+GGG | + | chr4_3:51199231-51199250 | Msa0645770:CDS | 45.0% |
| !! | CTCTAAGCCTGCCTTTGTTT+TGG | - | chr4_3:51199704-51199723 | None:intergenic | 45.0% |
| AAACAAAGGCAGGCTTAGAG+AGG | + | chr4_3:51199704-51199723 | Msa0645770:intron | 45.0% | |
| TATTGGAAAAGGGAAGGGGT+TGG | + | chr4_3:51199966-51199985 | Msa0645770:intron | 45.0% | |
| !! | GTTTTAGGTATGCCACGTGA+AGG | - | chr4_3:51200217-51200236 | None:intergenic | 45.0% |
| ! | CCTGCAACCTGCAATGTTTT+AGG | - | chr4_3:51200232-51200251 | None:intergenic | 45.0% |
| CCTAAAACATTGCAGGTTGC+AGG | + | chr4_3:51200229-51200248 | Msa0645770:CDS | 45.0% | |
| GTGCAGTTGCAGAACTTCAA+TGG | + | chr4_3:51200331-51200350 | Msa0645770:intron | 45.0% | |
| ! | CCCTGACTGAATTTTTGTGC+AGG | + | chr4_3:51200374-51200393 | Msa0645770:intron | 45.0% |
| ! | AGGTCTGGTCTTCGCATTTA+TGG | + | chr4_3:51200394-51200413 | Msa0645770:intron | 45.0% |
| CATTACCAAGAACCAGGATG+CGG | + | chr4_3:51200563-51200582 | Msa0645770:CDS | 45.0% | |
| ATTACCAAGAACCAGGATGC+GGG | + | chr4_3:51200564-51200583 | Msa0645770:CDS | 45.0% | |
| ! | GATCTGAGATAGCCAAACAG+AGG | + | chr4_3:51200590-51200609 | Msa0645770:exon | 45.0% |
| GATTACAGAAGTTAGGACGG+GGG | - | chr4_3:51200737-51200756 | None:intergenic | 45.0% | |
| GACATCAATGAGCGTGCAAA+AGG | + | chr4_3:51200864-51200883 | Msa0645770:three_prime_UTR | 45.0% | |
| TTGCTAGATCCAACCCCATT+CGG | - | chr4_3:51201036-51201055 | None:intergenic | 45.0% | |
| !! | ATAATAAATTTAATTAGAAT+AGG | - | chr4_3:51199341-51199360 | None:intergenic | 5.0% |
| CAAGTTCTTAACCCTGAGCG+AGG | + | chr4_3:51193681-51193700 | Msa0645770:five_prime_UTR | 50.0% | |
| GGAATGGAATACCTCGCTCA+GGG | - | chr4_3:51193695-51193714 | None:intergenic | 50.0% | |
| ! | CCCCTGGGACTAGAATCTTT+TGG | - | chr4_3:51193723-51193742 | None:intergenic | 50.0% |
| ! | TGTGAGTGGTACTGAGAGTG+GGG | - | chr4_3:51193747-51193766 | None:intergenic | 50.0% |
| TTTGGCGCGGAAAATGTGAG+TGG | - | chr4_3:51193761-51193780 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr4_3:51193823-51193842 | None:intergenic | 50.0% | |
| !!! | TGCGTAGTTTTAGGCGGAAG+AGG | + | chr4_3:51193969-51193988 | Msa0645770:CDS | 50.0% |
| GAGATTCGGAGTGGTGAAGT+TGG | - | chr4_3:51194076-51194095 | None:intergenic | 50.0% | |
| GTTTATCGGTGAGGTCGAGA+TGG | - | chr4_3:51194139-51194158 | None:intergenic | 50.0% | |
| TTCGGCGATGCGGTGTTTAT+CGG | - | chr4_3:51194153-51194172 | None:intergenic | 50.0% | |
| AACGATTACCTTCGGCGATG+CGG | - | chr4_3:51194163-51194182 | None:intergenic | 50.0% | |
| ATAAACCGCTGGCATATCCG+TGG | + | chr4_3:51194498-51194517 | Msa0645770:CDS | 50.0% | |
| ACTTTCCACGGATATGCCAG+CGG | - | chr4_3:51194506-51194525 | None:intergenic | 50.0% | |
| GGACACCACCTCAGACATAT+AGG | + | chr4_3:51194863-51194882 | Msa0645770:intron | 50.0% | |
| GGCACAAATTCTGTGTCACC+AGG | - | chr4_3:51195073-51195092 | None:intergenic | 50.0% | |
| TTCCAAACGGTTTCTGTGGC+TGG | + | chr4_3:51195862-51195881 | Msa0645770:CDS | 50.0% | |
| TTCCAGCCACAGAAACCGTT+TGG | - | chr4_3:51195867-51195886 | None:intergenic | 50.0% | |
| AACGGTTTCTGTGGCTGGAA+AGG | + | chr4_3:51195867-51195886 | Msa0645770:CDS | 50.0% | |
| AATACGGTTGTTGCCTGCTG+CGG | - | chr4_3:51196448-51196467 | None:intergenic | 50.0% | |
| TGCACACACACACACACTAG+AGG | + | chr4_3:51196967-51196986 | Msa0645770:intron | 50.0% | |
| GCACACACACACACACTAGA+GGG | + | chr4_3:51196968-51196987 | Msa0645770:intron | 50.0% | |
| CACACACACACACACTAGAG+GGG | + | chr4_3:51196969-51196988 | Msa0645770:intron | 50.0% | |
| AAGCTGCTTGGCAGTGGAAA+AGG | + | chr4_3:51197364-51197383 | Msa0645770:CDS | 50.0% | |
| TGCTTGGCAGTGGAAAAGGT+TGG | + | chr4_3:51197368-51197387 | Msa0645770:intron | 50.0% | |
| CCCAACAAGCCTACAAGCTT+AGG | - | chr4_3:51197634-51197653 | None:intergenic | 50.0% | |
| ! | TGTCCTTGGTGTGTGCTCAT+AGG | - | chr4_3:51197922-51197941 | None:intergenic | 50.0% |
| !! | TAGAAACGAGGGAGTGTCCT+TGG | - | chr4_3:51197936-51197955 | None:intergenic | 50.0% |
| !! | CCTGAGGGTATGCTTTGAAG+GGG | - | chr4_3:51197962-51197981 | None:intergenic | 50.0% |
| AAGGTCATGGGTTCAAGTCC+TGG | - | chr4_3:51198192-51198211 | None:intergenic | 50.0% | |
| AGGCTCGCATCTTCCTTCAT+AGG | + | chr4_3:51199058-51199077 | Msa0645770:intron | 50.0% | |
| TCTGCAGCAAATGGTCGTAC+AGG | - | chr4_3:51199102-51199121 | None:intergenic | 50.0% | |
| !! | TATAAAGGGACTGGCCCAAG+GGG | + | chr4_3:51199232-51199251 | Msa0645770:CDS | 50.0% |
| ATGAAGGGGGGAAAGAAGAC+TGG | - | chr4_3:51199675-51199694 | None:intergenic | 50.0% | |
| !! | AAGGGAAGGGGTTGGTTATC+TGG | + | chr4_3:51199974-51199993 | Msa0645770:intron | 50.0% |
| AGAAGCCGCGATACAGAAAC+AGG | - | chr4_3:51200521-51200540 | None:intergenic | 50.0% | |
| GTATCGCGGCTTCTGCATTA+TGG | + | chr4_3:51200527-51200546 | Msa0645770:CDS | 50.0% | |
| GCTAAGCCGAAACCTCTGTT+TGG | - | chr4_3:51200605-51200624 | None:intergenic | 50.0% | |
| GCGAGTAACCTACAGCCTAT+AGG | - | chr4_3:51200645-51200664 | None:intergenic | 50.0% | |
| AGGCTGTAGGTTACTCGCAA+AGG | + | chr4_3:51200647-51200666 | Msa0645770:three_prime_UTR | 50.0% | |
| CTGTAGGTTACTCGCAAAGG+TGG | + | chr4_3:51200650-51200669 | Msa0645770:three_prime_UTR | 50.0% | |
| AAGTTAGGACGGGGGAGAAA+GGG | - | chr4_3:51200729-51200748 | None:intergenic | 50.0% | |
| CGTCTTCAGCCTTAACTCAC+CGG | - | chr4_3:51200769-51200788 | None:intergenic | 50.0% | |
| GGGAATGGAATACCTCGCTC+AGG | - | chr4_3:51193696-51193715 | None:intergenic | 55.0% | |
| AGCTTCGGCGAGGAGAGATT+CGG | - | chr4_3:51194090-51194109 | None:intergenic | 55.0% | |
| AAGAAGAGAGAGCTTCGGCG+AGG | - | chr4_3:51194100-51194119 | None:intergenic | 55.0% | |
| GCGGGAAGAAGAGAGAGCTT+CGG | - | chr4_3:51194105-51194124 | None:intergenic | 55.0% | |
| ! | GAGATGGACGTAAGAAGCGC+GGG | - | chr4_3:51194123-51194142 | None:intergenic | 55.0% |
| CGAGATGGACGTAAGAAGCG+CGG | - | chr4_3:51194124-51194143 | None:intergenic | 55.0% | |
| CGATGCGGTGTTTATCGGTG+AGG | - | chr4_3:51194148-51194167 | None:intergenic | 55.0% | |
| GATAAACACCGCATCGCCGA+AGG | + | chr4_3:51194152-51194171 | Msa0645770:CDS | 55.0% | |
| GCTACTTCATTCACCGCAGC+AGG | + | chr4_3:51196432-51196451 | Msa0645770:intron | 55.0% | |
| GCAGATAAGCTGCTTGGCAG+TGG | + | chr4_3:51197358-51197377 | Msa0645770:CDS | 55.0% | |
| ! | CCTTGGTGTGTGCTCATAGG+TGG | - | chr4_3:51197919-51197938 | None:intergenic | 55.0% |
| CCACCTATGAGCACACACCA+AGG | + | chr4_3:51197916-51197935 | Msa0645770:intron | 55.0% | |
| CCCCTTCAAAGCATACCCTC+AGG | + | chr4_3:51197959-51197978 | Msa0645770:intron | 55.0% | |
| ! | CTGCAGGAGCTTTGTGCAAC+GGG | - | chr4_3:51198097-51198116 | None:intergenic | 55.0% |
| ! | CCTGCAGGAGCTTTGTGCAA+CGG | - | chr4_3:51198098-51198117 | None:intergenic | 55.0% |
| CGTTGCACAAAGCTCCTGCA+GGG | + | chr4_3:51198096-51198115 | Msa0645770:intron | 55.0% | |
| CAGCCCAAGGAAACATGCGA+AGG | - | chr4_3:51198570-51198589 | None:intergenic | 55.0% | |
| CTTCGCATGTTTCCTTGGGC+TGG | + | chr4_3:51198568-51198587 | Msa0645770:CDS | 55.0% | |
| GAAGTTAGGACGGGGGAGAA+AGG | - | chr4_3:51200730-51200749 | None:intergenic | 55.0% | |
| TACTGAGAGTGGGGACCCCT+GGG | - | chr4_3:51193738-51193757 | None:intergenic | 60.0% | |
| ! | CGCACCGATAGTCTCCCTTG+AGG | + | chr4_3:51196720-51196739 | Msa0645770:CDS | 60.0% |
| CCGTTGCACAAAGCTCCTGC+AGG | + | chr4_3:51198095-51198114 | Msa0645770:intron | 60.0% | |
| CACAAAGCTCCTGCAGGGTC+CGG | + | chr4_3:51198101-51198120 | Msa0645770:intron | 60.0% | |
| ACAAAGCTCCTGCAGGGTCC+GGG | + | chr4_3:51198102-51198121 | Msa0645770:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4_3:51198123-51198142 | None:intergenic | 60.0% |
| ! | GACTGGCCCAAGGGGATGAT+TGG | + | chr4_3:51199240-51199259 | Msa0645770:CDS | 60.0% |
| GCAGGCTTAGAGAGGCAGTC+TGG | + | chr4_3:51199712-51199731 | Msa0645770:intron | 60.0% | |
| ! | CTTGCCCGCATCCTGGTTCT+TGG | - | chr4_3:51200571-51200590 | None:intergenic | 60.0% |
| CTCAGATCTTGCCCGCATCC+TGG | - | chr4_3:51200578-51200597 | None:intergenic | 60.0% | |
| GTACTGAGAGTGGGGACCCC+TGG | - | chr4_3:51193739-51193758 | None:intergenic | 65.0% | |
| CGGCGAGGAGAGATTCGGAG+TGG | - | chr4_3:51194085-51194104 | None:intergenic | 65.0% | |
| AGCTCCTGCAGGGTCCGGGA+AGG | + | chr4_3:51198106-51198125 | Msa0645770:intron | 70.0% | |
| GCTCCTGCAGGGTCCGGGAA+GGG | + | chr4_3:51198107-51198126 | Msa0645770:intron | 70.0% | |
| CTCCTGCAGGGTCCGGGAAG+GGG | + | chr4_3:51198108-51198127 | Msa0645770:intron | 70.0% | |
| GACCCCTTCCCGGACCCTGC+AGG | - | chr4_3:51198113-51198132 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 51193567 | 51201058 | 51193567 | ID=Msa0645770;Name=Msa0645770 |
| chr4_3 | mRNA | 51193567 | 51201058 | 51193567 | ID=Msa0645770-mRNA-1;Parent=Msa0645770;Name=Msa0645770-mRNA-1;_AED=0.10;_eAED=0.10;_QI=256|0.91|0.92|1|0.91|0.84|13|457|595 |
| chr4_3 | exon | 51193567 | 51193814 | 51193567 | ID=Msa0645770-mRNA-1:exon:12368;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51193916 | 51194173 | 51193916 | ID=Msa0645770-mRNA-1:exon:12369;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51194243 | 51194335 | 51194243 | ID=Msa0645770-mRNA-1:exon:12370;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51194411 | 51194523 | 51194411 | ID=Msa0645770-mRNA-1:exon:12371;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51194959 | 51195129 | 51194959 | ID=Msa0645770-mRNA-1:exon:12372;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51195772 | 51195888 | 51195772 | ID=Msa0645770-mRNA-1:exon:12373;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51195980 | 51196059 | 51195980 | ID=Msa0645770-mRNA-1:exon:12374;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51196546 | 51196741 | 51196546 | ID=Msa0645770-mRNA-1:exon:12375;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51197277 | 51197385 | 51197277 | ID=Msa0645770-mRNA-1:exon:12376;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51198531 | 51198705 | 51198531 | ID=Msa0645770-mRNA-1:exon:12377;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51199121 | 51199277 | 51199121 | ID=Msa0645770-mRNA-1:exon:12378;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51200190 | 51200310 | 51200190 | ID=Msa0645770-mRNA-1:exon:12379;Parent=Msa0645770-mRNA-1 |
| chr4_3 | exon | 51200396 | 51201058 | 51200396 | ID=Msa0645770-mRNA-1:exon:12380;Parent=Msa0645770-mRNA-1 |
| chr4_3 | five_prime_UTR | 51193567 | 51193814 | 51193567 | ID=Msa0645770-mRNA-1:five_prime_utr;Parent=Msa0645770-mRNA-1 |
| chr4_3 | five_prime_UTR | 51193916 | 51193923 | 51193916 | ID=Msa0645770-mRNA-1:five_prime_utr;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51193924 | 51194173 | 51193924 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51194243 | 51194335 | 51194243 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51194411 | 51194523 | 51194411 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51194959 | 51195129 | 51194959 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51195772 | 51195888 | 51195772 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51195980 | 51196059 | 51195980 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51196546 | 51196741 | 51196546 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51197277 | 51197385 | 51197277 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51198531 | 51198705 | 51198531 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51199121 | 51199277 | 51199121 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51200190 | 51200310 | 51200190 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | CDS | 51200396 | 51200601 | 51200396 | ID=Msa0645770-mRNA-1:cds;Parent=Msa0645770-mRNA-1 |
| chr4_3 | three_prime_UTR | 51200602 | 51201058 | 51200602 | ID=Msa0645770-mRNA-1:three_prime_utr;Parent=Msa0645770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
