Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646480 | XP_003606893.1 | 96.158 | 885 | 6 | 2 | 1 | 857 | 1 | 885 | 0.0 | 1719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646480 | sp|Q0WW26|COPG_ARATH | 82.525 | 887 | 124 | 4 | 1 | 857 | 1 | 886 | 0.0 | 1492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646480 | G7JG50 | 96.158 | 885 | 6 | 2 | 1 | 857 | 1 | 885 | 0.0 | 1719 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0605530 | Msa0646480 | 0.884407 | 1.968942e-71 | -8.615850e-47 |
| Msa0606120 | Msa0646480 | 0.806216 | 9.160661e-50 | -8.615850e-47 |
| Msa0646480 | Msa0647070 | 0.804521 | 2.075583e-49 | -8.615850e-47 |
| Msa0646480 | Msa0686100 | 0.909863 | 3.555340e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646480 | MtrunA17_Chr4g0034881 | 96.158 | 885 | 6 | 2 | 1 | 857 | 1 | 885 | 0.0 | 1719 |
| Msa0646480 | MtrunA17_Chr3g0144501 | 86.937 | 888 | 84 | 4 | 1 | 857 | 1 | 887 | 0.0 | 1571 |
| Msa0646480 | MtrunA17_Chr4g0038901 | 20.169 | 590 | 400 | 16 | 50 | 585 | 48 | 620 | 7.35e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646480 | AT4G34450.1 | 82.525 | 887 | 124 | 4 | 1 | 857 | 1 | 886 | 0.0 | 1492 |
| Msa0646480 | AT2G16200.1 | 63.768 | 69 | 25 | 0 | 789 | 857 | 1 | 69 | 2.67e-24 | 97.4 |
| Msa0646480 | AT2G16200.2 | 63.077 | 65 | 24 | 0 | 793 | 857 | 19 | 83 | 4.80e-22 | 91.3 |
| Msa0646480 | AT4G23460.1 | 19.727 | 512 | 352 | 15 | 50 | 521 | 48 | 540 | 2.94e-11 | 67.8 |
Find 246 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGAATTATATCTCGTATT+TGG | 0.114942 | 4_3:+52260703 | Msa0646480:three_prime_UTR |
| GTTTCAAATACCTCTCAATT+TGG | 0.170952 | 4_3:-52254957 | None:intergenic |
| TACGTACTTAATTGTGTATT+TGG | 0.171251 | 4_3:+52260736 | Msa0646480:three_prime_UTR |
| ATTTCCTGAGTAACATTCTT+AGG | 0.185985 | 4_3:+52257095 | Msa0646480:CDS |
| GTACTTGTGCGGCTGTCTTT+TGG | 0.253038 | 4_3:+52260253 | Msa0646480:CDS |
| CATTGAGAAAACAAATATTA+TGG | 0.255718 | 4_3:-52260641 | None:intergenic |
| AATCACCATAATACAAATTT+AGG | 0.260954 | 4_3:-52260408 | None:intergenic |
| TGCGGCCTAAATTTGTATTA+TGG | 0.264327 | 4_3:+52260403 | Msa0646480:three_prime_UTR |
| TGCTTCTGTTGATGGATTAA+AGG | 0.267375 | 4_3:+52257482 | Msa0646480:CDS |
| ATCAACAGAAGCACCAAATT+TGG | 0.272603 | 4_3:-52257472 | None:intergenic |
| TAAACCCGACATGATACTTC+TGG | 0.288101 | 4_3:-52260544 | None:intergenic |
| GGGAAAGTTCCTTTATTATC+AGG | 0.294554 | 4_3:-52254680 | None:intergenic |
| CTCGGCTAGTTACACCATTA+AGG | 0.316336 | 4_3:-52256392 | None:intergenic |
| CACAATACCCGAACAACTAT+TGG | 0.321464 | 4_3:+52258404 | Msa0646480:CDS |
| TCATCCACTCGTTCAGAATC+AGG | 0.322426 | 4_3:-52259009 | None:intergenic |
| TTTCAAATACCTCTCAATTT+GGG | 0.330735 | 4_3:-52254956 | None:intergenic |
| CAGAATTATATCTCGTATTT+GGG | 0.333851 | 4_3:+52260704 | Msa0646480:three_prime_UTR |
| ATTCCTGAGTTTGCAAACTT+TGG | 0.335169 | 4_3:+52258160 | Msa0646480:CDS |
| GTGTGGCAATGCTTCTGTTC+TGG | 0.335873 | 4_3:-52256789 | None:intergenic |
| AATACTGTCATCACTCTTCT+TGG | 0.336080 | 4_3:+52259072 | Msa0646480:CDS |
| CACTAACTGCAACATTGATA+TGG | 0.336809 | 4_3:+52256750 | Msa0646480:CDS |
| ATTAAGTATAATTATGACTA+TGG | 0.337761 | 4_3:-52260580 | None:intergenic |
| TCAGGAAATATTACACAATC+AGG | 0.339131 | 4_3:+52256282 | Msa0646480:CDS |
| TAAATTTGTATTATGGTGAT+TGG | 0.348524 | 4_3:+52260410 | Msa0646480:three_prime_UTR |
| ACATCTTCCAATAGTTGTTC+GGG | 0.350910 | 4_3:-52258411 | None:intergenic |
| TACATCTTCCAATAGTTGTT+CGG | 0.354992 | 4_3:-52258412 | None:intergenic |
| CTCCACTTCCTTGGCATTGA+AGG | 0.364156 | 4_3:+52257351 | Msa0646480:CDS |
| ATGCCATTCGTGTGCTTTGT+CGG | 0.366102 | 4_3:+52254911 | Msa0646480:CDS |
| AAATTTGGTGCTTCTGTTGA+TGG | 0.368371 | 4_3:+52257474 | Msa0646480:CDS |
| TTCCTGAGTTTGCAAACTTT+GGG | 0.370603 | 4_3:+52258161 | Msa0646480:CDS |
| AAGGTGGAGCAATGAGGTTC+AGG | 0.374504 | 4_3:+52255156 | Msa0646480:CDS |
| AAGGCAATTACAGACCTTAA+TGG | 0.375353 | 4_3:+52256378 | Msa0646480:CDS |
| TTTACCAGGGGCTTTCTTCT+CGG | 0.376153 | 4_3:-52258059 | None:intergenic |
| ACGTACTTAATTGTGTATTT+GGG | 0.379870 | 4_3:+52260737 | Msa0646480:three_prime_UTR |
| AATATACCGAATATATTTGC+TGG | 0.382125 | 4_3:-52257391 | None:intergenic |
| GTGAGCACACTAGCCAAATT+TGG | 0.386077 | 4_3:+52257459 | Msa0646480:CDS |
| TGATATCCCGCTCGTCAATC+TGG | 0.391883 | 4_3:+52257878 | Msa0646480:CDS |
| CAAACCCTGAGATTGTAAAA+AGG | 0.394453 | 4_3:+52255137 | Msa0646480:CDS |
| GGCTGAGACTTGACCTCCTT+GGG | 0.395700 | 4_3:-52258031 | None:intergenic |
| CCAGATGTTGGCAATCCCTC+AGG | 0.396127 | 4_3:-52258628 | None:intergenic |
| AGGGCCGCACTTGCAACAAC+TGG | 0.399353 | 4_3:-52255000 | None:intergenic |
| AACCCACTTTCCTTAGCATC+AGG | 0.400667 | 4_3:-52257184 | None:intergenic |
| CGCGCTGGCTTTGCTACATC+AGG | 0.401512 | 4_3:+52255216 | Msa0646480:CDS |
| ACTTTCAAGAAAATCATAGA+AGG | 0.405493 | 4_3:-52256313 | None:intergenic |
| AGCTGAAGAACAGTGATTGC+TGG | 0.407442 | 4_3:-52256423 | None:intergenic |
| ACAGTAAGACTGATATGTAT+AGG | 0.414240 | 4_3:+52254884 | Msa0646480:CDS |
| ATCTCGAGAATGCAACTGTT+AGG | 0.414312 | 4_3:+52257427 | Msa0646480:CDS |
| CCTGAGGGATTGCCAACATC+TGG | 0.415471 | 4_3:+52258628 | Msa0646480:CDS |
| TCTGAGATTTATTGTTAAAG+AGG | 0.421358 | 4_3:+52258666 | Msa0646480:CDS |
| AGGAAGAGATCTGAGGGGTT+TGG | 0.422472 | 4_3:-52258566 | None:intergenic |
| GGGAAGTGTTCGCTCACCTT+TGG | 0.422783 | 4_3:+52256136 | Msa0646480:CDS |
| GCTTCGGACAAGCCTTCCCT+TGG | 0.423385 | 4_3:-52259045 | None:intergenic |
| TTAGAAAACTTTCCAGATGT+TGG | 0.424560 | 4_3:-52258640 | None:intergenic |
| TTAACCCAAGATCTCGAGAT+TGG | 0.432181 | 4_3:-52254644 | None:intergenic |
| AATGGTGTACCTGATAATAA+AGG | 0.432582 | 4_3:+52254671 | Msa0646480:CDS |
| CAGTAAGACTGATATGTATA+GGG | 0.436247 | 4_3:+52254885 | Msa0646480:CDS |
| GAGAATGTCAACCTTGTTCA+AGG | 0.437546 | 4_3:-52256493 | None:intergenic |
| CCAAATACGAGATATAATTC+TGG | 0.437941 | 4_3:-52260703 | None:intergenic |
| CTGCAGGTTATTCGCGAGTC+AGG | 0.437953 | 4_3:+52256264 | Msa0646480:intron |
| TCTTTGACTGCAGGAGCCTT+CGG | 0.438517 | 4_3:+52257982 | Msa0646480:intron |
| CTTCAGCCTCGCCAGAGGTT+GGG | 0.441129 | 4_3:-52258876 | None:intergenic |
| GGCTAGTGTGCTCACAGCAC+TGG | 0.441877 | 4_3:-52257451 | None:intergenic |
| CACAGATTCACCACCTTCTC+CGG | 0.443477 | 4_3:+52253369 | Msa0646480:five_prime_UTR |
| ACAGCAGCAAATCTCAATAC+TGG | 0.445031 | 4_3:-52256465 | None:intergenic |
| AGGCTGAGACTTGACCTCCT+TGG | 0.447016 | 4_3:-52258032 | None:intergenic |
| GGGCTGTTCTTCAAGAGGCC+CGG | 0.450990 | 4_3:+52254106 | Msa0646480:CDS |
| TATTGTCGGGTGTATACATA+GGG | 0.451006 | 4_3:+52260221 | Msa0646480:CDS |
| TCTTCAGCCTCGCCAGAGGT+TGG | 0.451809 | 4_3:-52258877 | None:intergenic |
| ATTCCAGGTTATTGTAGTTG+TGG | 0.452428 | 4_3:+52258507 | Msa0646480:intron |
| TTCCCAAAGTTTGCAAACTC+AGG | 0.454897 | 4_3:-52258163 | None:intergenic |
| CTTTATCTTAACACACTTGG+AGG | 0.455687 | 4_3:+52257807 | Msa0646480:CDS |
| CCTTAGATACTCCACTTCCT+TGG | 0.456772 | 4_3:+52257342 | Msa0646480:intron |
| TCAACATATCTTGACTTGAA+TGG | 0.457042 | 4_3:-52260375 | None:intergenic |
| AATTTGTAATCTGCTTCATA+AGG | 0.458318 | 4_3:-52256861 | None:intergenic |
| GTCCTTCAATGCCAAGGAAG+TGG | 0.461397 | 4_3:-52257353 | None:intergenic |
| TGGACCCCAGCAAATATATT+CGG | 0.466206 | 4_3:+52257385 | Msa0646480:CDS |
| ACCTCTCAATTTGGGTAAGG+AGG | 0.467875 | 4_3:-52254948 | None:intergenic |
| TTTCCTGAGTAACATTCTTA+GGG | 0.469038 | 4_3:+52257096 | Msa0646480:CDS |
| GGCTGTTCTTCAAGAGGCCC+GGG | 0.470531 | 4_3:+52254107 | Msa0646480:CDS |
| CTTCGGACAAGCCTTCCCTT+GGG | 0.471166 | 4_3:-52259044 | None:intergenic |
| CATGTGTGTGACCTTGAATT+AGG | 0.473080 | 4_3:-52260196 | None:intergenic |
| CGAGTGGATGAATACGGTCT+TGG | 0.474887 | 4_3:+52259021 | Msa0646480:CDS |
| AATCTCGAGATCTTGGGTTA+AGG | 0.475513 | 4_3:+52254646 | Msa0646480:CDS |
| AATTTACACTGGTTCGTTCA+AGG | 0.476622 | 4_3:+52260761 | Msa0646480:three_prime_UTR |
| AAAGGATGTTGCAATGAAAC+TGG | 0.479392 | 4_3:+52260288 | Msa0646480:CDS |
| AAACCCGACATGATACTTCT+GGG | 0.480836 | 4_3:-52260543 | None:intergenic |
| GTTTGGGTGCTCCTCCTAGT+GGG | 0.481200 | 4_3:+52258095 | Msa0646480:CDS |
| ACTGCAGGAGCCTTCGGAAG+AGG | 0.482502 | 4_3:+52257988 | Msa0646480:intron |
| TCGACTAGCAGTTAGCAAAC+TGG | 0.484708 | 4_3:+52256097 | Msa0646480:CDS |
| TGATTGCTGGAGTTAATTCT+CGG | 0.485049 | 4_3:-52256410 | None:intergenic |
| AACACTTCCCCTTGTCAAGC+TGG | 0.485369 | 4_3:-52256123 | None:intergenic |
| TCGTGTGCTTTGTCGGATCA+CGG | 0.486313 | 4_3:+52254918 | Msa0646480:CDS |
| CCTTCGTCACAAGTCCGAAA+TGG | 0.488100 | 4_3:+52256338 | Msa0646480:CDS |
| CCCGCATATTTGTTCTGCTA+AGG | 0.488720 | 4_3:+52257609 | Msa0646480:CDS |
| TTCACCACCTTCTCCGGCGA+TGG | 0.492908 | 4_3:+52253375 | Msa0646480:exon |
| TGTGTAAAGAATTGCAACTT+TGG | 0.498076 | 4_3:+52260458 | Msa0646480:three_prime_UTR |
| GGTGGTGAATCTGTGAGATC+TGG | 0.498374 | 4_3:-52253361 | None:intergenic |
| ATCCCTGATGCTAAGGAAAG+TGG | 0.499662 | 4_3:+52257181 | Msa0646480:CDS |
| TCTGCTTCAGTAAGCTCCAC+AGG | 0.503537 | 4_3:-52258309 | None:intergenic |
| AATACCTCTCAATTTGGGTA+AGG | 0.504377 | 4_3:-52254951 | None:intergenic |
| GATGCGAGGGACTTCCTCTT+CGG | 0.505539 | 4_3:+52257849 | Msa0646480:CDS |
| ATCTCGAGATTGGAAAAGCT+TGG | 0.506597 | 4_3:-52254634 | None:intergenic |
| CTTGATCCGTTACACAAGTC+AGG | 0.507330 | 4_3:+52256169 | Msa0646480:CDS |
| GACCAGGTTGACCCAACCTC+TGG | 0.507760 | 4_3:+52258865 | Msa0646480:intron |
| TGAAGTTTAGAATTGAAGAA+AGG | 0.508327 | 4_3:-52253293 | None:intergenic |
| AAAGAATTGCAACTTTGGCT+TGG | 0.508966 | 4_3:+52260463 | Msa0646480:three_prime_UTR |
| GGCAGATTACATATTGAAAG+TGG | 0.509324 | 4_3:+52258948 | Msa0646480:CDS |
| GTCACACACATGCTTATTGT+CGG | 0.512785 | 4_3:+52260207 | Msa0646480:CDS |
| GATGACAGTATTTACAGCTT+CGG | 0.513779 | 4_3:-52259061 | None:intergenic |
| TCATATGAATCCACAGTGGA+TGG | 0.514753 | 4_3:-52258121 | None:intergenic |
| AACCGCTTGCCACAATCTCA+TGG | 0.515317 | 4_3:-52260348 | None:intergenic |
| AGTAACATTCTTAGGGAAGA+AGG | 0.515461 | 4_3:+52257103 | Msa0646480:CDS |
| GGCTGAGCCATCGCCGGAGA+AGG | 0.515540 | 4_3:-52253382 | None:intergenic |
| TGACATTAATTTGGTGCCCA+AGG | 0.517478 | 4_3:+52258015 | Msa0646480:CDS |
| ATATGAATCCACAGTGGATG+GGG | 0.517753 | 4_3:-52258119 | None:intergenic |
| GTCTGCCCAGGTGAATCATA+AGG | 0.518091 | 4_3:-52258586 | None:intergenic |
| AGATCTTGGGTTAAGGAGAA+TGG | 0.521392 | 4_3:+52254653 | Msa0646480:CDS |
| ATATACCGAATATATTTGCT+GGG | 0.521845 | 4_3:-52257390 | None:intergenic |
| TTACCAGTCCTCAGCACCTG+TGG | 0.522599 | 4_3:+52258293 | Msa0646480:intron |
| TCTCGAGAATGCAACTGTTA+GGG | 0.522696 | 4_3:+52257428 | Msa0646480:CDS |
| ACACTTTATCTTAACACACT+TGG | 0.523186 | 4_3:+52257804 | Msa0646480:CDS |
| ATACTGGCTTGGAAGAACTT+AGG | 0.525861 | 4_3:-52256449 | None:intergenic |
| ATGAATTACCTTCGTCGTCA+CGG | 0.525890 | 4_3:-52253426 | None:intergenic |
| GGTTTGGGTGCTCCTCCTAG+TGG | 0.528947 | 4_3:+52258094 | Msa0646480:CDS |
| AGGTCGTCCCACCTAATTCA+AGG | 0.529115 | 4_3:+52260185 | Msa0646480:CDS |
| CTTCCCTAAGAATGTTACTC+AGG | 0.529688 | 4_3:-52257099 | None:intergenic |
| TCTCTTCCTTATGATTCACC+TGG | 0.529952 | 4_3:+52258580 | Msa0646480:CDS |
| CCTTAGCAGAACAAATATGC+GGG | 0.530435 | 4_3:-52257609 | None:intergenic |
| GGGGCTTTCTTCTCGGCAAG+AGG | 0.532512 | 4_3:-52258052 | None:intergenic |
| CATATGAATCCACAGTGGAT+GGG | 0.533554 | 4_3:-52258120 | None:intergenic |
| TAGAGATATCCCTGATGCTA+AGG | 0.533771 | 4_3:+52257174 | Msa0646480:CDS |
| TACGGTCTTGGCCCAAGGGA+AGG | 0.536329 | 4_3:+52259033 | Msa0646480:CDS |
| AATTTATCACCTGTGTCGAC+AGG | 0.539284 | 4_3:-52257249 | None:intergenic |
| TGCTGTCCGCACCTTGAACA+AGG | 0.541322 | 4_3:+52256482 | Msa0646480:CDS |
| TGGTCTCCAGATTGACGAGC+GGG | 0.541433 | 4_3:-52257884 | None:intergenic |
| AGTTAAACAGCCACATAGCT+AGG | 0.542194 | 4_3:+52260433 | Msa0646480:three_prime_UTR |
| GCAAGTGCGGCCCTAGTTAG+TGG | 0.543102 | 4_3:+52255009 | Msa0646480:CDS |
| AGCAAATCTCAATACTGGCT+TGG | 0.543208 | 4_3:-52256460 | None:intergenic |
| TCCCTGATGCTAAGGAAAGT+GGG | 0.543834 | 4_3:+52257182 | Msa0646480:CDS |
| CAGGAAATATTACACAATCA+GGG | 0.544297 | 4_3:+52256283 | Msa0646480:CDS |
| GTAGATGAATACCACTAACT+AGG | 0.544395 | 4_3:-52255020 | None:intergenic |
| TCTTGGCATGCAACCTTGTG+AGG | 0.544482 | 4_3:+52259089 | Msa0646480:CDS |
| TTATTGTCGGGTGTATACAT+AGG | 0.544529 | 4_3:+52260220 | Msa0646480:CDS |
| TTGCAGTTAGTGACTGCCAT+TGG | 0.546532 | 4_3:-52256739 | None:intergenic |
| CATCCACTCGTTCAGAATCA+GGG | 0.547058 | 4_3:-52259008 | None:intergenic |
| TGTATTTGGGAAATTTACAC+TGG | 0.547552 | 4_3:+52260750 | Msa0646480:three_prime_UTR |
| TCTGGCGAGGCTGAAGATGA+TGG | 0.547600 | 4_3:+52258883 | Msa0646480:CDS |
| ATCAAGAGACATTGGGCCAA+AGG | 0.551616 | 4_3:-52256152 | None:intergenic |
| CGTTGAAGATGAATACCAGC+TGG | 0.552341 | 4_3:+52258906 | Msa0646480:CDS |
| TAGTGGTATTCATCTACTCC+AGG | 0.552999 | 4_3:+52255026 | Msa0646480:CDS |
| CCTCTCAATTTGGGTAAGGA+GGG | 0.553566 | 4_3:-52254947 | None:intergenic |
| TCTGAACGAGTGGATGAATA+CGG | 0.554007 | 4_3:+52259015 | Msa0646480:CDS |
| TCTTCAATTCTAAACTTCAG+TGG | 0.554514 | 4_3:+52253297 | Msa0646480:five_prime_UTR |
| TCACACACATGCTTATTGTC+GGG | 0.555717 | 4_3:+52260208 | Msa0646480:CDS |
| ATGAATACGGTCTTGGCCCA+AGG | 0.555779 | 4_3:+52259028 | Msa0646480:CDS |
| TGTCTAATTTCAGGAACGCA+TGG | 0.557299 | 4_3:+52258974 | Msa0646480:CDS |
| TCTTGTACAATTTCACGCGC+TGG | 0.557651 | 4_3:+52255201 | Msa0646480:CDS |
| GCAGATTACATATTGAAAGT+GGG | 0.557921 | 4_3:+52258949 | Msa0646480:CDS |
| GTGCTTTGTCGGATCACGGA+TGG | 0.561141 | 4_3:+52254922 | Msa0646480:CDS |
| ATGATCCACAACTAGATGCT+AGG | 0.562098 | 4_3:+52254136 | Msa0646480:CDS |
| AGATGCTAGGAGATGTTCAC+AGG | 0.562547 | 4_3:+52254149 | Msa0646480:CDS |
| TGTAACGGATCAAGAGACAT+TGG | 0.563004 | 4_3:-52256160 | None:intergenic |
| GTAACGGATCAAGAGACATT+GGG | 0.565503 | 4_3:-52256159 | None:intergenic |
| ATACCCAGAAGTATCATGTC+GGG | 0.565789 | 4_3:+52260540 | Msa0646480:three_prime_UTR |
| TTTACACACACCTAGCTATG+TGG | 0.566281 | 4_3:-52260443 | None:intergenic |
| ATCATAAGGAAGAGATCTGA+GGG | 0.568747 | 4_3:-52258572 | None:intergenic |
| AACTGGTTACCAGCTTGACA+AGG | 0.570909 | 4_3:+52256114 | Msa0646480:CDS |
| TTTATAACCTCGTCTGCAGA+GGG | 0.571108 | 4_3:-52254702 | None:intergenic |
| ACTTCTGGGTATTGTTGCTG+AGG | 0.572128 | 4_3:-52260529 | None:intergenic |
| TGAGCCATCGCCGGAGAAGG+TGG | 0.574105 | 4_3:-52253379 | None:intergenic |
| CGTCACGAGCTCTCTCATGA+AGG | 0.576960 | 4_3:+52254855 | Msa0646480:CDS |
| TATAACCTCGTCTGCAGAGG+GGG | 0.576990 | 4_3:-52254700 | None:intergenic |
| CATCATTGGCTTACCTCACA+AGG | 0.578882 | 4_3:-52259102 | None:intergenic |
| CAGGAACGCATGGGAAAGCA+TGG | 0.579106 | 4_3:+52258984 | Msa0646480:CDS |
| AACGCCACAAAAGTCTGCCC+AGG | 0.583006 | 4_3:-52258598 | None:intergenic |
| TAGATGAATACCACTAACTA+GGG | 0.583080 | 4_3:-52255019 | None:intergenic |
| GAATCCAGTTGTTGCAAGTG+CGG | 0.583487 | 4_3:+52254996 | Msa0646480:CDS |
| AAGAGTAGTAATAGCAAGTG+TGG | 0.586121 | 4_3:-52256806 | None:intergenic |
| TGAATACGGTCTTGGCCCAA+GGG | 0.587422 | 4_3:+52259029 | Msa0646480:CDS |
| GGATATCAAGTGAGCCGAAG+AGG | 0.589509 | 4_3:-52257863 | None:intergenic |
| TCATCGTCTTTCTTGATAAG+CGG | 0.590697 | 4_3:-52253403 | None:intergenic |
| GTGTGTGACCTTGAATTAGG+TGG | 0.595130 | 4_3:-52260193 | None:intergenic |
| ATTTATAACCTCGTCTGCAG+AGG | 0.595326 | 4_3:-52254703 | None:intergenic |
| CAGATTACATATTGAAAGTG+GGG | 0.600224 | 4_3:+52258950 | Msa0646480:CDS |
| CATCTCCTAGCATCTAGTTG+TGG | 0.601531 | 4_3:-52254141 | None:intergenic |
| GACAGGAAATGAATCAAGTG+TGG | 0.601757 | 4_3:+52256834 | Msa0646480:CDS |
| GTCTAATTTCAGGAACGCAT+GGG | 0.602050 | 4_3:+52258975 | Msa0646480:CDS |
| GACGATGACCGTGACGACGA+AGG | 0.602361 | 4_3:+52253418 | Msa0646480:CDS |
| TGAGATTGATAAAGATGCGA+GGG | 0.603374 | 4_3:+52257836 | Msa0646480:CDS |
| ACCCACTTTCCTTAGCATCA+GGG | 0.604088 | 4_3:-52257183 | None:intergenic |
| CTTCAGTGGTGCACTTACAA+AGG | 0.604901 | 4_3:+52253311 | Msa0646480:five_prime_UTR |
| TGTGGCGTTTGAGAAGCCTG+AGG | 0.604943 | 4_3:+52258612 | Msa0646480:CDS |
| ATGTCAAAAGCCTCTTCCGA+AGG | 0.609072 | 4_3:-52257998 | None:intergenic |
| AGTAAGCTCCACAGGTGCTG+AGG | 0.610022 | 4_3:-52258301 | None:intergenic |
| GTGGCGTTTGAGAAGCCTGA+GGG | 0.610662 | 4_3:+52258613 | Msa0646480:CDS |
| CCACTGTGGATTCATATGAA+AGG | 0.612693 | 4_3:+52258125 | Msa0646480:CDS |
| AACACACCTGACTTGTGTAA+CGG | 0.614135 | 4_3:-52256175 | None:intergenic |
| ATCATCTTCAGCCTCGCCAG+AGG | 0.614172 | 4_3:-52258881 | None:intergenic |
| ATAAGCGGCTGAGCCATCGC+CGG | 0.614224 | 4_3:-52253388 | None:intergenic |
| GATCCGACAAAGCACACGAA+TGG | 0.616477 | 4_3:-52254914 | None:intergenic |
| CTCTTCCTTATGATTCACCT+GGG | 0.617576 | 4_3:+52258581 | Msa0646480:CDS |
| CATTAATTTGGTGCCCAAGG+AGG | 0.617595 | 4_3:+52258018 | Msa0646480:CDS |
| GCTTGCCACAATCTCATGGA+TGG | 0.618369 | 4_3:-52260344 | None:intergenic |
| TGACAAGAAGTATGCAGTGA+GGG | 0.618939 | 4_3:-52260504 | None:intergenic |
| CCATTTCGGACTTGTGACGA+AGG | 0.619323 | 4_3:-52256338 | None:intergenic |
| CTTGCCGAGAAGAAAGCCCC+TGG | 0.619544 | 4_3:+52258055 | Msa0646480:CDS |
| ATACCAGCTGGAGGATCTAG+AGG | 0.621534 | 4_3:+52258918 | Msa0646480:CDS |
| AACAGAAAAGAAAACTTCTG+TGG | 0.622899 | 4_3:-52254610 | None:intergenic |
| GGTTGACCCAACCTCTGGCG+AGG | 0.622975 | 4_3:+52258870 | Msa0646480:intron |
| AGGAAATATTACACAATCAG+GGG | 0.624728 | 4_3:+52256284 | Msa0646480:CDS |
| CAACCTCTAGATCCTCCAGC+TGG | 0.624747 | 4_3:-52258921 | None:intergenic |
| ATCCATGAGATTGTGGCAAG+CGG | 0.630120 | 4_3:+52260346 | Msa0646480:CDS |
| TGATGCCATCCATGAGATTG+TGG | 0.630840 | 4_3:+52260339 | Msa0646480:CDS |
| AACATTCTTAGGGAAGAAGG+TGG | 0.632595 | 4_3:+52257106 | Msa0646480:CDS |
| AATCATAAGGAAGAGATCTG+AGG | 0.638595 | 4_3:-52258573 | None:intergenic |
| GGAGGATCTAGAGGTTGTTG+CGG | 0.641056 | 4_3:+52258927 | Msa0646480:CDS |
| CTTTCAAGAAAATCATAGAA+GGG | 0.642452 | 4_3:-52256312 | None:intergenic |
| CCCTCCTTACCCAAATTGAG+AGG | 0.643975 | 4_3:+52254947 | Msa0646480:CDS |
| GCCTTAGCAGAACAAATATG+CGG | 0.646975 | 4_3:-52257610 | None:intergenic |
| AAGTGTGTTAAGATAAAGTG+TGG | 0.647393 | 4_3:-52257802 | None:intergenic |
| AATCTTCAATGAACTCACAA+AGG | 0.647450 | 4_3:-52257213 | None:intergenic |
| CTGAGATTGATAAAGATGCG+AGG | 0.648808 | 4_3:+52257835 | Msa0646480:CDS |
| GGAGCACCCAAACCACCAGT+TGG | 0.649439 | 4_3:-52258085 | None:intergenic |
| ACTGGTTACCAGCTTGACAA+GGG | 0.650734 | 4_3:+52256115 | Msa0646480:CDS |
| AATACCCAGAAGTATCATGT+CGG | 0.650762 | 4_3:+52260539 | Msa0646480:three_prime_UTR |
| TTGTCGGGTGTATACATAGG+GGG | 0.654756 | 4_3:+52260223 | Msa0646480:CDS |
| GGACCCTGATTCTGAACGAG+TGG | 0.660047 | 4_3:+52259005 | Msa0646480:CDS |
| TGTCAACCTTGTTCAAGGTG+CGG | 0.660820 | 4_3:-52256488 | None:intergenic |
| CTGGTTACCAGCTTGACAAG+GGG | 0.662402 | 4_3:+52256116 | Msa0646480:CDS |
| TATGAATCCACAGTGGATGG+GGG | 0.670381 | 4_3:-52258118 | None:intergenic |
| TGTGTGACCTTGAATTAGGT+GGG | 0.672239 | 4_3:-52260192 | None:intergenic |
| ATTCACTTACCTGTCGACAC+AGG | 0.673693 | 4_3:+52257240 | Msa0646480:CDS |
| GGTGGCAATGACACATCCAA+TGG | 0.675268 | 4_3:+52256723 | Msa0646480:intron |
| AGATTACATATTGAAAGTGG+GGG | 0.675495 | 4_3:+52258951 | Msa0646480:CDS |
| TGAAGATGAATACCAGCTGG+AGG | 0.678607 | 4_3:+52258909 | Msa0646480:CDS |
| CTTAGCAGAACAAATATGCG+GGG | 0.682439 | 4_3:-52257608 | None:intergenic |
| CAAGATATGTTGACTCAATG+CGG | 0.692650 | 4_3:+52260385 | Msa0646480:three_prime_UTR |
| TATACCGAATATATTTGCTG+GGG | 0.697705 | 4_3:-52257389 | None:intergenic |
| CTGGTCTCCAGATTGACGAG+CGG | 0.703175 | 4_3:-52257885 | None:intergenic |
| ATTGTCGGGTGTATACATAG+GGG | 0.715775 | 4_3:+52260222 | Msa0646480:CDS |
| CCTTTCATATGAATCCACAG+TGG | 0.729978 | 4_3:-52258125 | None:intergenic |
| CTGACAAGAAGTATGCAGTG+AGG | 0.736360 | 4_3:-52260505 | None:intergenic |
| TCACTACTTGCAGGGCACAG+AGG | 0.740479 | 4_3:+52260165 | Msa0646480:intron |
| GGGGTGTTAAGGTACTTGTG+CGG | 0.740516 | 4_3:+52260242 | Msa0646480:CDS |
| TTATAACCTCGTCTGCAGAG+GGG | 0.747009 | 4_3:-52254701 | None:intergenic |
| TCATAAGGAAGAGATCTGAG+GGG | 0.799654 | 4_3:-52258571 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTGTTTATTTATCTA+TGG | + | chr4_3:52254184-52254203 | Msa0646480:intron | 10.0% |
| !! | ATCTTTAATTAAGAAATAAA+AGG | - | chr4_3:52254492-52254511 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAAATAAAAGAGA+TGG | - | chr4_3:52254826-52254845 | None:intergenic | 10.0% |
| !!! | ATCTCTTTTATTTTTTTAAA+AGG | + | chr4_3:52254825-52254844 | Msa0646480:intron | 10.0% |
| !! | TATATATTAATAATAATACC+TGG | - | chr4_3:52255047-52255066 | None:intergenic | 10.0% |
| !!! | TTAAATTTTTATTTGGAAAA+TGG | - | chr4_3:52255544-52255563 | None:intergenic | 10.0% |
| !! | TCCAAATAAAAATTTAAATT+CGG | + | chr4_3:52255547-52255566 | Msa0646480:intron | 10.0% |
| !!! | TAATATTAAAAGATTTTTCA+CGG | + | chr4_3:52256644-52256663 | Msa0646480:intron | 10.0% |
| !!! | ACCGAATTTAAATTTTTATT+TGG | - | chr4_3:52255551-52255570 | None:intergenic | 15.0% |
| !! | CTCAAATTCTATTAAATTTA+TGG | - | chr4_3:52256523-52256542 | None:intergenic | 15.0% |
| !! | AATTTAATAGAATTTGAGAA+AGG | + | chr4_3:52256525-52256544 | Msa0646480:intron | 15.0% |
| !! | TTATTAATAATTTATGAGTG+TGG | + | chr4_3:52256686-52256705 | Msa0646480:intron | 15.0% |
| !!! | TCTATTATGTTATTATTTTC+AGG | + | chr4_3:52257068-52257087 | Msa0646480:intron | 15.0% |
| !!! | TCTAGAATTTTTGTTTATTT+AGG | + | chr4_3:52257535-52257554 | Msa0646480:intron | 15.0% |
| !!! | CTAGAATTTTTGTTTATTTA+GGG | + | chr4_3:52257536-52257555 | Msa0646480:intron | 15.0% |
| !!! | ATCAACTTCAAAATTTTAAA+AGG | - | chr4_3:52259440-52259459 | None:intergenic | 15.0% |
| !! | ATTAAGTATAATTATGACTA+TGG | - | chr4_3:52260583-52260602 | None:intergenic | 15.0% |
| !! | TAGAAACATAAATTAAGCAT+TGG | - | chr4_3:52253522-52253541 | None:intergenic | 20.0% |
| !!! | CTTAATTTATGTTTCTATTG+AGG | + | chr4_3:52253525-52253544 | Msa0646480:intron | 20.0% |
| !! | TTGAATTTATCACAAGTTTA+TGG | + | chr4_3:52253900-52253919 | Msa0646480:intron | 20.0% |
| !! | AAAGAATTAATCCACAAATA+CGG | - | chr4_3:52254035-52254054 | None:intergenic | 20.0% |
| !! | AAAGATTGTATCTTACTTAT+AGG | + | chr4_3:52254506-52254525 | Msa0646480:intron | 20.0% |
| !! | AAGAAAAGAATTACTGAAAA+AGG | - | chr4_3:52254569-52254588 | None:intergenic | 20.0% |
| !!! | TATATTTTAATACACAACGA+AGG | - | chr4_3:52255271-52255290 | None:intergenic | 20.0% |
| !!! | AATATCTAACAGGTTTTAAA+AGG | - | chr4_3:52255453-52255472 | None:intergenic | 20.0% |
| !!! | AATTTTTATTTGGAAAATGG+AGG | - | chr4_3:52255541-52255560 | None:intergenic | 20.0% |
| !! | TAAAAATTTAAATTCGGTAC+AGG | + | chr4_3:52255553-52255572 | Msa0646480:intron | 20.0% |
| !! | AAAAATTTAAATTCGGTACA+GGG | + | chr4_3:52255554-52255573 | Msa0646480:intron | 20.0% |
| !!! | AGCTTAAGCTTTTTAATAAT+TGG | + | chr4_3:52255617-52255636 | Msa0646480:intron | 20.0% |
| !!! | CTTGTTGATATTTGATTTTT+TGG | + | chr4_3:52255729-52255748 | Msa0646480:intron | 20.0% |
| !! | ATGAATGTAACTTATTTGTT+TGG | - | chr4_3:52256029-52256048 | None:intergenic | 20.0% |
| !! | TTGCATTTCTATAATTTATG+TGG | + | chr4_3:52257682-52257701 | Msa0646480:intron | 20.0% |
| !!! | TGCTTTGATTTATATTTTGA+TGG | + | chr4_3:52257743-52257762 | Msa0646480:intron | 20.0% |
| !!! | TTCTTTTCATTAGTTACTTT+AGG | + | chr4_3:52257942-52257961 | Msa0646480:intron | 20.0% |
| !! | CATGATCAGTTTAATAAAAT+GGG | - | chr4_3:52259164-52259183 | None:intergenic | 20.0% |
| !! | TCATGATCAGTTTAATAAAA+TGG | - | chr4_3:52259165-52259184 | None:intergenic | 20.0% |
| !! | ACTAAAAAAATGTTACTATC+AGG | + | chr4_3:52259255-52259274 | Msa0646480:intron | 20.0% |
| !!! | AAATTTTAAAAGGAACTAAG+CGG | - | chr4_3:52259430-52259449 | None:intergenic | 20.0% |
| !! | AATCACCATAATACAAATTT+AGG | - | chr4_3:52260411-52260430 | None:intergenic | 20.0% |
| !! | TAAATTTGTATTATGGTGAT+TGG | + | chr4_3:52260410-52260429 | Msa0646480:three_prime_UTR | 20.0% |
| !! | CATTGAGAAAACAAATATTA+TGG | - | chr4_3:52260644-52260663 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTCTCAATGAAT+TGG | + | chr4_3:52260647-52260666 | Msa0646480:three_prime_UTR | 20.0% |
| !! | TGAAGTTTAGAATTGAAGAA+AGG | - | chr4_3:52253296-52253315 | None:intergenic | 25.0% |
| !!! | ATTATGCAGTGTTTTTGTAT+AGG | - | chr4_3:52253339-52253358 | None:intergenic | 25.0% |
| !!! | GTTCGTTTTTTAATTGTTGT+CGG | + | chr4_3:52253602-52253621 | Msa0646480:intron | 25.0% |
| !! | TATAGCTTCTTTTCAAACTT+CGG | + | chr4_3:52253960-52253979 | Msa0646480:intron | 25.0% |
| ! | TACGGACATTATAAGTATAT+AGG | - | chr4_3:52254017-52254036 | None:intergenic | 25.0% |
| ! | ACAGTAAAAAATCAAACTAC+TGG | - | chr4_3:52254385-52254404 | None:intergenic | 25.0% |
| ! | TTTCAAATACCTCTCAATTT+GGG | - | chr4_3:52254959-52254978 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTCGATTTAGCA+CGG | + | chr4_3:52255381-52255400 | Msa0646480:intron | 25.0% |
| ! | TGTAATTCTGAATATCTAAC+AGG | - | chr4_3:52255463-52255482 | None:intergenic | 25.0% |
| ! | AAAATTTAAATTCGGTACAG+GGG | + | chr4_3:52255555-52255574 | Msa0646480:intron | 25.0% |
| !! | AGTTTTGCTTTCTTTTATTG+TGG | - | chr4_3:52255708-52255727 | None:intergenic | 25.0% |
| !! | GCTAAAATAAGAGTATGAAT+AGG | - | chr4_3:52255821-52255840 | None:intergenic | 25.0% |
| !! | TATATCAATGTGTCATTGAT+AGG | - | chr4_3:52255977-52255996 | None:intergenic | 25.0% |
| !! | CATTCATATTTGTTGAAACA+TGG | + | chr4_3:52256042-52256061 | Msa0646480:intron | 25.0% |
| ! | CTTTCAAGAAAATCATAGAA+GGG | - | chr4_3:52256315-52256334 | None:intergenic | 25.0% |
| ! | ACTTTCAAGAAAATCATAGA+AGG | - | chr4_3:52256316-52256335 | None:intergenic | 25.0% |
| ! | AATTTGTAATCTGCTTCATA+AGG | - | chr4_3:52256864-52256883 | None:intergenic | 25.0% |
| !!! | CACAGAGATCTATATTTTAA+AGG | - | chr4_3:52256958-52256977 | None:intergenic | 25.0% |
| !! | TTGAATATTTTCCCTGATAA+TGG | + | chr4_3:52257030-52257049 | Msa0646480:intron | 25.0% |
| ! | AGTAATTTAGACCATTATCA+GGG | - | chr4_3:52257044-52257063 | None:intergenic | 25.0% |
| ! | ATATACCGAATATATTTGCT+GGG | - | chr4_3:52257393-52257412 | None:intergenic | 25.0% |
| ! | AATATACCGAATATATTTGC+TGG | - | chr4_3:52257394-52257413 | None:intergenic | 25.0% |
| !!! | TATGATTTTGATTTCTTTGC+AGG | + | chr4_3:52257767-52257786 | Msa0646480:intron | 25.0% |
| !!! | ACTTACGTATTTTTTCAAAC+TGG | - | chr4_3:52257907-52257926 | None:intergenic | 25.0% |
| !! | TCTGAGATTTATTGTTAAAG+AGG | + | chr4_3:52258666-52258685 | Msa0646480:CDS | 25.0% |
| ! | ACAAGAAAACCACAAATAAA+GGG | - | chr4_3:52258700-52258719 | None:intergenic | 25.0% |
| !! | ACATAATATAATGGAGATCT+TGG | - | chr4_3:52258723-52258742 | None:intergenic | 25.0% |
| !! | TAGACCTATAATAGATTTTG+TGG | + | chr4_3:52258810-52258829 | Msa0646480:intron | 25.0% |
| ! | CTTTCCACAAAATCTATTAT+AGG | - | chr4_3:52258817-52258836 | None:intergenic | 25.0% |
| ! | TTTCTCGAAAGAATCTAATT+GGG | - | chr4_3:52259235-52259254 | None:intergenic | 25.0% |
| !! | TTTTCTCGAAAGAATCTAAT+TGG | - | chr4_3:52259236-52259255 | None:intergenic | 25.0% |
| !! | CTTTCTCATACATCAATTTT+AGG | + | chr4_3:52259354-52259373 | Msa0646480:intron | 25.0% |
| ! | AAAGTTTAAATGCTACTCAT+GGG | - | chr4_3:52259498-52259517 | None:intergenic | 25.0% |
| ! | TAAAGTTTAAATGCTACTCA+TGG | - | chr4_3:52259499-52259518 | None:intergenic | 25.0% |
| ! | TATCAAAACTCTCAACAATT+GGG | - | chr4_3:52259661-52259680 | None:intergenic | 25.0% |
| ! | ATATCAAAACTCTCAACAAT+TGG | - | chr4_3:52259662-52259681 | None:intergenic | 25.0% |
| ! | AAAGAGATGCAAATACATTT+AGG | + | chr4_3:52259690-52259709 | Msa0646480:intron | 25.0% |
| !! | AGTAGTTCCTTTTAATGATT+TGG | + | chr4_3:52259738-52259757 | Msa0646480:intron | 25.0% |
| ! | TCTAATGCCAAATCATTAAA+AGG | - | chr4_3:52259748-52259767 | None:intergenic | 25.0% |
| ! | AACCTAAGAAACTCTTAAAT+CGG | - | chr4_3:52259855-52259874 | None:intergenic | 25.0% |
| ! | AACAAAATGTCTAATATTCC+AGG | - | chr4_3:52259963-52259982 | None:intergenic | 25.0% |
| ! | CAGAATTATATCTCGTATTT+GGG | + | chr4_3:52260704-52260723 | Msa0646480:three_prime_UTR | 25.0% |
| ! | TACGTACTTAATTGTGTATT+TGG | + | chr4_3:52260736-52260755 | Msa0646480:three_prime_UTR | 25.0% |
| ! | ACGTACTTAATTGTGTATTT+GGG | + | chr4_3:52260737-52260756 | Msa0646480:three_prime_UTR | 25.0% |
| TCTTCAATTCTAAACTTCAG+TGG | + | chr4_3:52253297-52253316 | Msa0646480:five_prime_UTR | 30.0% | |
| AAGAGAAAAACGGAAAAAGT+GGG | - | chr4_3:52253456-52253475 | None:intergenic | 30.0% | |
| AAAGAGAAAAACGGAAAAAG+TGG | - | chr4_3:52253457-52253476 | None:intergenic | 30.0% | |
| !! | CATAAATTAAGCATTGGATC+TGG | - | chr4_3:52253516-52253535 | None:intergenic | 30.0% |
| ! | TATGTTTCTATTGAGGAATG+CGG | + | chr4_3:52253532-52253551 | Msa0646480:intron | 30.0% |
| ! | TATAGCTTCTTTTCACACTT+TGG | + | chr4_3:52253747-52253766 | Msa0646480:intron | 30.0% |
| ACTTATAATGTCCGTATTTG+TGG | + | chr4_3:52254021-52254040 | Msa0646480:intron | 30.0% | |
| ! | AGATAATTATTCCCCGTTTT+TGG | + | chr4_3:52254071-52254090 | Msa0646480:intron | 30.0% |
| !! | GATAATTATTCCCCGTTTTT+GGG | + | chr4_3:52254072-52254091 | Msa0646480:intron | 30.0% |
| ACGTAATCAATCACATGTAT+CGG | + | chr4_3:52254289-52254308 | Msa0646480:intron | 30.0% | |
| !! | ATAACAGTTTTGTGATAACC+TGG | - | chr4_3:52254424-52254443 | None:intergenic | 30.0% |
| ! | CTTTTCTTGCCTCATTTTAT+AGG | + | chr4_3:52254581-52254600 | Msa0646480:intron | 30.0% |
| AACAGAAAAGAAAACTTCTG+TGG | - | chr4_3:52254613-52254632 | None:intergenic | 30.0% | |
| AATGGTGTACCTGATAATAA+AGG | + | chr4_3:52254671-52254690 | Msa0646480:CDS | 30.0% | |
| ACTTGTCAGATTCACTTAAA+CGG | + | chr4_3:52254769-52254788 | Msa0646480:intron | 30.0% | |
| ACAGTAAGACTGATATGTAT+AGG | + | chr4_3:52254884-52254903 | Msa0646480:CDS | 30.0% | |
| CAGTAAGACTGATATGTATA+GGG | + | chr4_3:52254885-52254904 | Msa0646480:CDS | 30.0% | |
| GTTTCAAATACCTCTCAATT+TGG | - | chr4_3:52254960-52254979 | None:intergenic | 30.0% | |
| TAGATGAATACCACTAACTA+GGG | - | chr4_3:52255022-52255041 | None:intergenic | 30.0% | |
| GTATATTTCATCTACATCAG+CGG | + | chr4_3:52255088-52255107 | Msa0646480:intron | 30.0% | |
| AATGTAATTCATCAGTTCCT+GGG | + | chr4_3:52255329-52255348 | Msa0646480:intron | 30.0% | |
| ! | ATTGAAGCTTTATGATCAAG+TGG | + | chr4_3:52255487-52255506 | Msa0646480:intron | 30.0% |
| AAATTTAAATTCGGTACAGG+GGG | + | chr4_3:52255556-52255575 | Msa0646480:intron | 30.0% | |
| ! | ACTTTTCTATAAGCTTCTCA+TGG | + | chr4_3:52255671-52255690 | Msa0646480:intron | 30.0% |
| AATAAAGAAGGATTCTTGGA+AGG | - | chr4_3:52256000-52256019 | None:intergenic | 30.0% | |
| TTCCAAGAATCCTTCTTTAT+TGG | + | chr4_3:52255999-52256018 | Msa0646480:intron | 30.0% | |
| ! | TTTTCTTATATAGTTGTCCC+TGG | + | chr4_3:52256202-52256221 | Msa0646480:intron | 30.0% |
| TTTCTTATATAGTTGTCCCT+GGG | + | chr4_3:52256203-52256222 | Msa0646480:intron | 30.0% | |
| TTATGTACCATAATATCTGC+AGG | + | chr4_3:52256248-52256267 | Msa0646480:intron | 30.0% | |
| TCAGGAAATATTACACAATC+AGG | + | chr4_3:52256282-52256301 | Msa0646480:CDS | 30.0% | |
| CAGGAAATATTACACAATCA+GGG | + | chr4_3:52256283-52256302 | Msa0646480:CDS | 30.0% | |
| AGGAAATATTACACAATCAG+GGG | + | chr4_3:52256284-52256303 | Msa0646480:CDS | 30.0% | |
| AGCTTCAAAAATCACCATTT+CGG | - | chr4_3:52256355-52256374 | None:intergenic | 30.0% | |
| ! | TTTTCTGTCTGTTATGATGT+TGG | + | chr4_3:52256587-52256606 | Msa0646480:intron | 30.0% |
| TTTCTGTCTGTTATGATGTT+GGG | + | chr4_3:52256588-52256607 | Msa0646480:intron | 30.0% | |
| !! | ATTACTACTCTTTTGAAGAC+AGG | + | chr4_3:52256817-52256836 | Msa0646480:CDS | 30.0% |
| GCTGAAAGAAACATATAGAA+TGG | - | chr4_3:52256991-52257010 | None:intergenic | 30.0% | |
| CAAATGAAAGATGTAACATC+TGG | - | chr4_3:52257013-52257032 | None:intergenic | 30.0% | |
| CAGTAATTTAGACCATTATC+AGG | - | chr4_3:52257045-52257064 | None:intergenic | 30.0% | |
| !! | CTGATAATGGTCTAAATTAC+TGG | + | chr4_3:52257043-52257062 | Msa0646480:intron | 30.0% |
| ATTTCCTGAGTAACATTCTT+AGG | + | chr4_3:52257095-52257114 | Msa0646480:CDS | 30.0% | |
| TTTCCTGAGTAACATTCTTA+GGG | + | chr4_3:52257096-52257115 | Msa0646480:CDS | 30.0% | |
| AATCTTCAATGAACTCACAA+AGG | - | chr4_3:52257216-52257235 | None:intergenic | 30.0% | |
| TAGTTTACTTTGCGTGATAT+TGG | + | chr4_3:52257286-52257305 | Msa0646480:intron | 30.0% | |
| AAGGGGAAAAAATTAACAAG+AGG | - | chr4_3:52257319-52257338 | None:intergenic | 30.0% | |
| ! | TATACCGAATATATTTGCTG+GGG | - | chr4_3:52257392-52257411 | None:intergenic | 30.0% |
| TAAACTTCCTTGAAAATCGT+AGG | - | chr4_3:52257710-52257729 | None:intergenic | 30.0% | |
| AAGTGTGTTAAGATAAAGTG+TGG | - | chr4_3:52257805-52257824 | None:intergenic | 30.0% | |
| ACACTTTATCTTAACACACT+TGG | + | chr4_3:52257804-52257823 | Msa0646480:CDS | 30.0% | |
| ! | AGAGGCTTTTGACATTAATT+TGG | + | chr4_3:52258006-52258025 | Msa0646480:CDS | 30.0% |
| !! | AAACTTTGGGAAGCTTTTTA+AGG | + | chr4_3:52258174-52258193 | Msa0646480:CDS | 30.0% |
| TACATCTTCCAATAGTTGTT+CGG | - | chr4_3:52258415-52258434 | None:intergenic | 30.0% | |
| TCATACTATTATGCAACTTC+AGG | + | chr4_3:52258461-52258480 | Msa0646480:intron | 30.0% | |
| AGGGAAAAATATTACACAGA+TGG | - | chr4_3:52258487-52258506 | None:intergenic | 30.0% | |
| ! | GTAATATTTTTCCCTATTCC+AGG | + | chr4_3:52258492-52258511 | Msa0646480:intron | 30.0% |
| AACTACAATAACCTGGAATA+GGG | - | chr4_3:52258506-52258525 | None:intergenic | 30.0% | |
| TTAGAAAACTTTCCAGATGT+TGG | - | chr4_3:52258643-52258662 | None:intergenic | 30.0% | |
| ! | GTACTTATTCCCTTTATTTG+TGG | + | chr4_3:52258688-52258707 | Msa0646480:intron | 30.0% |
| GACAAGAAAACCACAAATAA+AGG | - | chr4_3:52258701-52258720 | None:intergenic | 30.0% | |
| CACACGCATACATAATATAA+TGG | - | chr4_3:52258732-52258751 | None:intergenic | 30.0% | |
| GCAGATTACATATTGAAAGT+GGG | + | chr4_3:52258949-52258968 | Msa0646480:CDS | 30.0% | |
| CAGATTACATATTGAAAGTG+GGG | + | chr4_3:52258950-52258969 | Msa0646480:CDS | 30.0% | |
| AGATTACATATTGAAAGTGG+GGG | + | chr4_3:52258951-52258970 | Msa0646480:CDS | 30.0% | |
| ATGAATACGAAATCAGTGTA+TGG | - | chr4_3:52259290-52259309 | None:intergenic | 30.0% | |
| ! | ATTCATTTTCCATGCCTTAT+TGG | + | chr4_3:52259304-52259323 | Msa0646480:intron | 30.0% |
| !! | TTAGGTTGAACATTATTCTG+AGG | + | chr4_3:52259372-52259391 | Msa0646480:intron | 30.0% |
| !! | AACTTTAAAGTGCTGTTGTT+TGG | + | chr4_3:52259512-52259531 | Msa0646480:intron | 30.0% |
| GTATTTGCATCTCTTTATGT+AGG | - | chr4_3:52259686-52259705 | None:intergenic | 30.0% | |
| ACCTAAGAAACTCTTAAATC+GGG | - | chr4_3:52259854-52259873 | None:intergenic | 30.0% | |
| TTCTTTCAAAAGTTCTTTGG+TGG | - | chr4_3:52260005-52260024 | None:intergenic | 30.0% | |
| CCTTTCTTTCAAAAGTTCTT+TGG | - | chr4_3:52260008-52260027 | None:intergenic | 30.0% | |
| !! | CCAAAGAACTTTTGAAAGAA+AGG | + | chr4_3:52260005-52260024 | Msa0646480:intron | 30.0% |
| ! | TTTTATTGTTCACTACTTGC+AGG | + | chr4_3:52260156-52260175 | Msa0646480:intron | 30.0% |
| TTTATTGTTCACTACTTGCA+GGG | + | chr4_3:52260157-52260176 | Msa0646480:intron | 30.0% | |
| ! | TCAACATATCTTGACTTGAA+TGG | - | chr4_3:52260378-52260397 | None:intergenic | 30.0% |
| TGTGTAAAGAATTGCAACTT+TGG | + | chr4_3:52260458-52260477 | Msa0646480:three_prime_UTR | 30.0% | |
| ! | TGTTTTCTCAATGAATTGGA+TGG | + | chr4_3:52260651-52260670 | Msa0646480:three_prime_UTR | 30.0% |
| CCAAATACGAGATATAATTC+TGG | - | chr4_3:52260706-52260725 | None:intergenic | 30.0% | |
| CCAGAATTATATCTCGTATT+TGG | + | chr4_3:52260703-52260722 | Msa0646480:three_prime_UTR | 30.0% | |
| TGTATTTGGGAAATTTACAC+TGG | + | chr4_3:52260750-52260769 | Msa0646480:three_prime_UTR | 30.0% | |
| TCATCGTCTTTCTTGATAAG+CGG | - | chr4_3:52253406-52253425 | None:intergenic | 35.0% | |
| AATTGCGCGAAAGAGAAAAA+CGG | - | chr4_3:52253466-52253485 | None:intergenic | 35.0% | |
| TCACGATGCTTGAATTGAAT+TGG | + | chr4_3:52253570-52253589 | Msa0646480:intron | 35.0% | |
| TTCAAAAAACGCACTAATCG+TGG | - | chr4_3:52253773-52253792 | None:intergenic | 35.0% | |
| ! | TGAAATGCAGTTCTTTTGTC+AGG | + | chr4_3:52253864-52253883 | Msa0646480:intron | 35.0% |
| ! | GTTTATGGTGACTAGTTAGT+TGG | + | chr4_3:52253915-52253934 | Msa0646480:intron | 35.0% |
| ! | CTTCTTTTCAAACTTCGGTT+AGG | + | chr4_3:52253965-52253984 | Msa0646480:intron | 35.0% |
| ! | CTTTTCAATTCCCAAAAACG+GGG | - | chr4_3:52254085-52254104 | None:intergenic | 35.0% |
| ! | CCTTTTCAATTCCCAAAAAC+GGG | - | chr4_3:52254086-52254105 | None:intergenic | 35.0% |
| ! | CCCTTTTCAATTCCCAAAAA+CGG | - | chr4_3:52254087-52254106 | None:intergenic | 35.0% |
| !! | CCGTTTTTGGGAATTGAAAA+GGG | + | chr4_3:52254084-52254103 | Msa0646480:CDS | 35.0% |
| !! | CGTTTTTGGGAATTGAAAAG+GGG | + | chr4_3:52254085-52254104 | Msa0646480:CDS | 35.0% |
| !! | GTTTTTGGGAATTGAAAAGG+GGG | + | chr4_3:52254086-52254105 | Msa0646480:CDS | 35.0% |
| TTGTGGATCATTAAAAACCC+GGG | - | chr4_3:52254127-52254146 | None:intergenic | 35.0% | |
| GTTGTGGATCATTAAAAACC+CGG | - | chr4_3:52254128-52254147 | None:intergenic | 35.0% | |
| ACTGTTATACCTACTGAATC+AGG | + | chr4_3:52254436-52254455 | Msa0646480:intron | 35.0% | |
| CTGTTATACCTACTGAATCA+GGG | + | chr4_3:52254437-52254456 | Msa0646480:intron | 35.0% | |
| TGGCTTCAACCTATAAAATG+AGG | - | chr4_3:52254593-52254612 | None:intergenic | 35.0% | |
| ! | TTTTCCAATCTCGAGATCTT+GGG | + | chr4_3:52254640-52254659 | Msa0646480:CDS | 35.0% |
| GGGAAAGTTCCTTTATTATC+AGG | - | chr4_3:52254683-52254702 | None:intergenic | 35.0% | |
| AATACCTCTCAATTTGGGTA+AGG | - | chr4_3:52254954-52254973 | None:intergenic | 35.0% | |
| GTAGATGAATACCACTAACT+AGG | - | chr4_3:52255023-52255042 | None:intergenic | 35.0% | |
| CAAACCCTGAGATTGTAAAA+AGG | + | chr4_3:52255137-52255156 | Msa0646480:CDS | 35.0% | |
| ! | TCCACCTTTTTACAATCTCA+GGG | - | chr4_3:52255144-52255163 | None:intergenic | 35.0% |
| CAATGTAATTCATCAGTTCC+TGG | + | chr4_3:52255328-52255347 | Msa0646480:intron | 35.0% | |
| TTGATCTTGATACATATCCC+AGG | - | chr4_3:52255349-52255368 | None:intergenic | 35.0% | |
| ATTGAATATTCGACATGAGC+TGG | + | chr4_3:52255413-52255432 | Msa0646480:intron | 35.0% | |
| GATGGCATAATGTCATAAGA+TGG | - | chr4_3:52255763-52255782 | None:intergenic | 35.0% | |
| ATTCGCAGTAGAATAGTAGA+TGG | - | chr4_3:52255781-52255800 | None:intergenic | 35.0% | |
| CATTGCTATGTTCTCAACTT+CGG | + | chr4_3:52255917-52255936 | Msa0646480:intron | 35.0% | |
| TGCCAATAAAGAAGGATTCT+TGG | - | chr4_3:52256004-52256023 | None:intergenic | 35.0% | |
| GTTTGGTATGCCAATAAAGA+AGG | - | chr4_3:52256012-52256031 | None:intergenic | 35.0% | |
| GAATTGCTACATTGCAGATA+CGG | + | chr4_3:52256066-52256085 | Msa0646480:intron | 35.0% | |
| CGAATAACCTGCAGATATTA+TGG | - | chr4_3:52256258-52256277 | None:intergenic | 35.0% | |
| AAGGCAATTACAGACCTTAA+TGG | + | chr4_3:52256378-52256397 | Msa0646480:CDS | 35.0% | |
| TGATTGCTGGAGTTAATTCT+CGG | - | chr4_3:52256413-52256432 | None:intergenic | 35.0% | |
| CACTAACTGCAACATTGATA+TGG | + | chr4_3:52256750-52256769 | Msa0646480:CDS | 35.0% | |
| AAGAGTAGTAATAGCAAGTG+TGG | - | chr4_3:52256809-52256828 | None:intergenic | 35.0% | |
| AGTAACATTCTTAGGGAAGA+AGG | + | chr4_3:52257103-52257122 | Msa0646480:CDS | 35.0% | |
| ! | TCGACACAGGTGATAAATTT+TGG | + | chr4_3:52257253-52257272 | Msa0646480:intron | 35.0% |
| CATTGAAGGACCAAAAACAT+TGG | + | chr4_3:52257365-52257384 | Msa0646480:CDS | 35.0% | |
| !! | ATCAACAGAAGCACCAAATT+TGG | - | chr4_3:52257475-52257494 | None:intergenic | 35.0% |
| !! | AAATTTGGTGCTTCTGTTGA+TGG | + | chr4_3:52257474-52257493 | Msa0646480:CDS | 35.0% |
| !! | TGCTTCTGTTGATGGATTAA+AGG | + | chr4_3:52257482-52257501 | Msa0646480:CDS | 35.0% |
| CTTTATCTTAACACACTTGG+AGG | + | chr4_3:52257807-52257826 | Msa0646480:CDS | 35.0% | |
| TGAGATTGATAAAGATGCGA+GGG | + | chr4_3:52257836-52257855 | Msa0646480:CDS | 35.0% | |
| ATTCCTGAGTTTGCAAACTT+TGG | + | chr4_3:52258160-52258179 | Msa0646480:CDS | 35.0% | |
| TTCCTGAGTTTGCAAACTTT+GGG | + | chr4_3:52258161-52258180 | Msa0646480:CDS | 35.0% | |
| ACATCTTCCAATAGTTGTTC+GGG | - | chr4_3:52258414-52258433 | None:intergenic | 35.0% | |
| CAACTACAATAACCTGGAAT+AGG | - | chr4_3:52258507-52258526 | None:intergenic | 35.0% | |
| ATTCCAGGTTATTGTAGTTG+TGG | + | chr4_3:52258507-52258526 | Msa0646480:intron | 35.0% | |
| ! | AGAAGCAGAAGAATTTTCTC+AGG | + | chr4_3:52258537-52258556 | Msa0646480:CDS | 35.0% |
| ATCATAAGGAAGAGATCTGA+GGG | - | chr4_3:52258575-52258594 | None:intergenic | 35.0% | |
| AATCATAAGGAAGAGATCTG+AGG | - | chr4_3:52258576-52258595 | None:intergenic | 35.0% | |
| ! | TCATAACTTGCATATTGACC+AGG | + | chr4_3:52258849-52258868 | Msa0646480:intron | 35.0% |
| GGCAGATTACATATTGAAAG+TGG | + | chr4_3:52258948-52258967 | Msa0646480:CDS | 35.0% | |
| GATGACAGTATTTACAGCTT+CGG | - | chr4_3:52259064-52259083 | None:intergenic | 35.0% | |
| AATACTGTCATCACTCTTCT+TGG | + | chr4_3:52259072-52259091 | Msa0646480:CDS | 35.0% | |
| ! | GTAAGACATTTCTTTTCCCA+TGG | + | chr4_3:52259622-52259641 | Msa0646480:intron | 35.0% |
| ACCCGATTTAAGAGTTTCTT+AGG | + | chr4_3:52259850-52259869 | Msa0646480:intron | 35.0% | |
| TGGATTTCTCTTTCACTTCA+TGG | + | chr4_3:52259888-52259907 | Msa0646480:intron | 35.0% | |
| ATGTCATTGCTAACATCATC+TGG | + | chr4_3:52259935-52259954 | Msa0646480:intron | 35.0% | |
| GTAATACAACCGTATCTTCT+AGG | + | chr4_3:52260065-52260084 | Msa0646480:intron | 35.0% | |
| TATTGCCTTCCTAGAAGATA+CGG | - | chr4_3:52260077-52260096 | None:intergenic | 35.0% | |
| GTAATACAACCGTATCTTCT+AGG | + | chr4_3:52260065-52260084 | Msa0646480:intron | 35.0% | |
| TATTGCCTTCCTAGAAGATA+CGG | - | chr4_3:52260077-52260096 | None:intergenic | 35.0% | |
| TTATTGTCGGGTGTATACAT+AGG | + | chr4_3:52260220-52260239 | Msa0646480:CDS | 35.0% | |
| TATTGTCGGGTGTATACATA+GGG | + | chr4_3:52260221-52260240 | Msa0646480:CDS | 35.0% | |
| AAAGGATGTTGCAATGAAAC+TGG | + | chr4_3:52260288-52260307 | Msa0646480:CDS | 35.0% | |
| !! | CAAGATATGTTGACTCAATG+CGG | + | chr4_3:52260385-52260404 | Msa0646480:three_prime_UTR | 35.0% |
| TGCGGCCTAAATTTGTATTA+TGG | + | chr4_3:52260403-52260422 | Msa0646480:three_prime_UTR | 35.0% | |
| AAAGAATTGCAACTTTGGCT+TGG | + | chr4_3:52260463-52260482 | Msa0646480:three_prime_UTR | 35.0% | |
| !! | AATACCCAGAAGTATCATGT+CGG | + | chr4_3:52260539-52260558 | Msa0646480:three_prime_UTR | 35.0% |
| !! | AATTTACACTGGTTCGTTCA+AGG | + | chr4_3:52260761-52260780 | Msa0646480:three_prime_UTR | 35.0% |
| ATGAATTACCTTCGTCGTCA+CGG | - | chr4_3:52253429-52253448 | None:intergenic | 40.0% | |
| TTGGATCTGGAAAATGAGCA+CGG | - | chr4_3:52253503-52253522 | None:intergenic | 40.0% | |
| TTCTATTGAGGAATGCGGTA+CGG | + | chr4_3:52253537-52253556 | Msa0646480:intron | 40.0% | |
| !! | CCCGTTTTTGGGAATTGAAA+AGG | + | chr4_3:52254083-52254102 | Msa0646480:CDS | 40.0% |
| ATGATCCACAACTAGATGCT+AGG | + | chr4_3:52254136-52254155 | Msa0646480:CDS | 40.0% | |
| !! | GTGCGTGTTTAACTTTTTCC+AGG | + | chr4_3:52254403-52254422 | Msa0646480:intron | 40.0% |
| TCAGGGAGAGACATTTACAA+AGG | + | chr4_3:52254454-52254473 | Msa0646480:intron | 40.0% | |
| ATCTCGAGATTGGAAAAGCT+TGG | - | chr4_3:52254637-52254656 | None:intergenic | 40.0% | |
| ! | CTTTTCCAATCTCGAGATCT+TGG | + | chr4_3:52254639-52254658 | Msa0646480:CDS | 40.0% |
| TTAACCCAAGATCTCGAGAT+TGG | - | chr4_3:52254647-52254666 | None:intergenic | 40.0% | |
| AATCTCGAGATCTTGGGTTA+AGG | + | chr4_3:52254646-52254665 | Msa0646480:CDS | 40.0% | |
| AGATCTTGGGTTAAGGAGAA+TGG | + | chr4_3:52254653-52254672 | Msa0646480:CDS | 40.0% | |
| TTTATAACCTCGTCTGCAGA+GGG | - | chr4_3:52254705-52254724 | None:intergenic | 40.0% | |
| ATTTATAACCTCGTCTGCAG+AGG | - | chr4_3:52254706-52254725 | None:intergenic | 40.0% | |
| TAGTGGTATTCATCTACTCC+AGG | + | chr4_3:52255026-52255045 | Msa0646480:CDS | 40.0% | |
| ACCCTGAGATTGTAAAAAGG+TGG | + | chr4_3:52255140-52255159 | Msa0646480:CDS | 40.0% | |
| ! | CTCCACCTTTTTACAATCTC+AGG | - | chr4_3:52255145-52255164 | None:intergenic | 40.0% |
| TGTAAAAAGGTGGAGCAATG+AGG | + | chr4_3:52255150-52255169 | Msa0646480:CDS | 40.0% | |
| ! | ATCACTGACGACAGAGTTTT+AGG | - | chr4_3:52255307-52255326 | None:intergenic | 40.0% |
| TTTGGAAAATGGAGGTGACA+GGG | - | chr4_3:52255533-52255552 | None:intergenic | 40.0% | |
| ATTTGGAAAATGGAGGTGAC+AGG | - | chr4_3:52255534-52255553 | None:intergenic | 40.0% | |
| AGACCATTAAATGCCTTCAG+TGG | + | chr4_3:52255592-52255611 | Msa0646480:intron | 40.0% | |
| !! | TGTCCACTGAAGGCATTTAA+TGG | - | chr4_3:52255598-52255617 | None:intergenic | 40.0% |
| ! | CTACAGCTGCAATTGATAAC+TGG | + | chr4_3:52255846-52255865 | Msa0646480:intron | 40.0% |
| ! | CAATGTGTCATTGATAGGAG+AGG | - | chr4_3:52255972-52255991 | None:intergenic | 40.0% |
| !! | GTAACGGATCAAGAGACATT+GGG | - | chr4_3:52256162-52256181 | None:intergenic | 40.0% |
| !! | TGTAACGGATCAAGAGACAT+TGG | - | chr4_3:52256163-52256182 | None:intergenic | 40.0% |
| ! | AACACACCTGACTTGTGTAA+CGG | - | chr4_3:52256178-52256197 | None:intergenic | 40.0% |
| TTCAAATGAATAGCCTCCCA+GGG | - | chr4_3:52256222-52256241 | None:intergenic | 40.0% | |
| ATTCAAATGAATAGCCTCCC+AGG | - | chr4_3:52256223-52256242 | None:intergenic | 40.0% | |
| !!! | GGTGATTTTTGAAGCTGCTA+AGG | + | chr4_3:52256359-52256378 | Msa0646480:CDS | 40.0% |
| !! | ATACTGGCTTGGAAGAACTT+AGG | - | chr4_3:52256452-52256471 | None:intergenic | 40.0% |
| ! | AGCAAATCTCAATACTGGCT+TGG | - | chr4_3:52256463-52256482 | None:intergenic | 40.0% |
| ACAGCAGCAAATCTCAATAC+TGG | - | chr4_3:52256468-52256487 | None:intergenic | 40.0% | |
| GAGAATGTCAACCTTGTTCA+AGG | - | chr4_3:52256496-52256515 | None:intergenic | 40.0% | |
| !! | TATGTTGATTCTCTCCCTTC+TGG | + | chr4_3:52256551-52256570 | Msa0646480:intron | 40.0% |
| !!! | AGTGTGGTTTTGAACTTTGC+AGG | + | chr4_3:52256702-52256721 | Msa0646480:intron | 40.0% |
| GACAGGAAATGAATCAAGTG+TGG | + | chr4_3:52256834-52256853 | Msa0646480:CDS | 40.0% | |
| CTTCCCTAAGAATGTTACTC+AGG | - | chr4_3:52257102-52257121 | None:intergenic | 40.0% | |
| AACATTCTTAGGGAAGAAGG+TGG | + | chr4_3:52257106-52257125 | Msa0646480:CDS | 40.0% | |
| TAGAGATATCCCTGATGCTA+AGG | + | chr4_3:52257174-52257193 | Msa0646480:CDS | 40.0% | |
| ! | AATTTATCACCTGTGTCGAC+AGG | - | chr4_3:52257252-52257271 | None:intergenic | 40.0% |
| ! | TGGAGTATCTAAGGTACAAG+GGG | - | chr4_3:52257336-52257355 | None:intergenic | 40.0% |
| ! | GTGGAGTATCTAAGGTACAA+GGG | - | chr4_3:52257337-52257356 | None:intergenic | 40.0% |
| ! | AGTGGAGTATCTAAGGTACA+AGG | - | chr4_3:52257338-52257357 | None:intergenic | 40.0% |
| !! | TTTTTGGTCCTTCAATGCCA+AGG | - | chr4_3:52257362-52257381 | None:intergenic | 40.0% |
| TGGACCCCAGCAAATATATT+CGG | + | chr4_3:52257385-52257404 | Msa0646480:CDS | 40.0% | |
| ATCTCGAGAATGCAACTGTT+AGG | + | chr4_3:52257427-52257446 | Msa0646480:CDS | 40.0% | |
| TCTCGAGAATGCAACTGTTA+GGG | + | chr4_3:52257428-52257447 | Msa0646480:CDS | 40.0% | |
| CTTAGCAGAACAAATATGCG+GGG | - | chr4_3:52257611-52257630 | None:intergenic | 40.0% | |
| CCTTAGCAGAACAAATATGC+GGG | - | chr4_3:52257612-52257631 | None:intergenic | 40.0% | |
| GCCTTAGCAGAACAAATATG+CGG | - | chr4_3:52257613-52257632 | None:intergenic | 40.0% | |
| !! | TCTTTTTGACAGTGATGACG+AGG | + | chr4_3:52257637-52257656 | Msa0646480:CDS | 40.0% |
| ! | TGTGGTTCCTACGATTTTCA+AGG | + | chr4_3:52257700-52257719 | Msa0646480:intron | 40.0% |
| CTGAGATTGATAAAGATGCG+AGG | + | chr4_3:52257835-52257854 | Msa0646480:CDS | 40.0% | |
| !! | TGACATTAATTTGGTGCCCA+AGG | + | chr4_3:52258015-52258034 | Msa0646480:CDS | 40.0% |
| TAAAAAGCCAACTGGTGGTT+TGG | + | chr4_3:52258078-52258097 | Msa0646480:CDS | 40.0% | |
| AAAAAGCCAACTGGTGGTTT+GGG | + | chr4_3:52258079-52258098 | Msa0646480:CDS | 40.0% | |
| ATATGAATCCACAGTGGATG+GGG | - | chr4_3:52258122-52258141 | None:intergenic | 40.0% | |
| CATATGAATCCACAGTGGAT+GGG | - | chr4_3:52258123-52258142 | None:intergenic | 40.0% | |
| TCATATGAATCCACAGTGGA+TGG | - | chr4_3:52258124-52258143 | None:intergenic | 40.0% | |
| CCTTTCATATGAATCCACAG+TGG | - | chr4_3:52258128-52258147 | None:intergenic | 40.0% | |
| CCACTGTGGATTCATATGAA+AGG | + | chr4_3:52258125-52258144 | Msa0646480:CDS | 40.0% | |
| TTCCCAAAGTTTGCAAACTC+AGG | - | chr4_3:52258166-52258185 | None:intergenic | 40.0% | |
| CACAATACCCGAACAACTAT+TGG | + | chr4_3:52258404-52258423 | Msa0646480:CDS | 40.0% | |
| CATCCACAACTACAATAACC+TGG | - | chr4_3:52258513-52258532 | None:intergenic | 40.0% | |
| TCATAAGGAAGAGATCTGAG+GGG | - | chr4_3:52258574-52258593 | None:intergenic | 40.0% | |
| TCTCTTCCTTATGATTCACC+TGG | + | chr4_3:52258580-52258599 | Msa0646480:CDS | 40.0% | |
| CTCTTCCTTATGATTCACCT+GGG | + | chr4_3:52258581-52258600 | Msa0646480:CDS | 40.0% | |
| TGTCTAATTTCAGGAACGCA+TGG | + | chr4_3:52258974-52258993 | Msa0646480:CDS | 40.0% | |
| GTCTAATTTCAGGAACGCAT+GGG | + | chr4_3:52258975-52258994 | Msa0646480:CDS | 40.0% | |
| TCTGAACGAGTGGATGAATA+CGG | + | chr4_3:52259015-52259034 | Msa0646480:CDS | 40.0% | |
| TAAGCCAATGATGTCAGTTG+TGG | + | chr4_3:52259112-52259131 | Msa0646480:intron | 40.0% | |
| ATTACTGCAACTGCAACATG+AGG | + | chr4_3:52259200-52259219 | Msa0646480:intron | 40.0% | |
| CTCGAAAGAATCTAATTGGG+AGG | - | chr4_3:52259232-52259251 | None:intergenic | 40.0% | |
| TTATGCTCTCCAATAAGGCA+TGG | - | chr4_3:52259316-52259335 | None:intergenic | 40.0% | |
| TTGGGTTATGCTCTCCAATA+AGG | - | chr4_3:52259321-52259340 | None:intergenic | 40.0% | |
| TTAAAAGGAACTAAGCGGAC+TGG | - | chr4_3:52259425-52259444 | None:intergenic | 40.0% | |
| ATTGCTAAACTCAAGCCACA+AGG | + | chr4_3:52259469-52259488 | Msa0646480:intron | 40.0% | |
| GTGAAGTAGAAGAGATTCTC+TGG | + | chr4_3:52259589-52259608 | Msa0646480:intron | 40.0% | |
| TTGCATCTATAACCTCGTTG+TGG | - | chr4_3:52259798-52259817 | None:intergenic | 40.0% | |
| TCAATGGTCTATGCTTACAC+AGG | - | chr4_3:52259828-52259847 | None:intergenic | 40.0% | |
| CTCTTAAATCGGGTTCTCAA+TGG | - | chr4_3:52259844-52259863 | None:intergenic | 40.0% | |
| TTAGGTTCTCGTGAGAGTAA+TGG | + | chr4_3:52259868-52259887 | Msa0646480:intron | 40.0% | |
| AGCCAATACTTTATCTCGAG+TGG | - | chr4_3:52259914-52259933 | None:intergenic | 40.0% | |
| ! | TACAACCGTATCTTCTAGGA+AGG | + | chr4_3:52260069-52260088 | Msa0646480:intron | 40.0% |
| ! | TACAACCGTATCTTCTAGGA+AGG | + | chr4_3:52260069-52260088 | Msa0646480:intron | 40.0% |
| TGTGTGACCTTGAATTAGGT+GGG | - | chr4_3:52260195-52260214 | None:intergenic | 40.0% | |
| CATGTGTGTGACCTTGAATT+AGG | - | chr4_3:52260199-52260218 | None:intergenic | 40.0% | |
| GTCACACACATGCTTATTGT+CGG | + | chr4_3:52260207-52260226 | Msa0646480:CDS | 40.0% | |
| TCACACACATGCTTATTGTC+GGG | + | chr4_3:52260208-52260227 | Msa0646480:CDS | 40.0% | |
| ATTGTCGGGTGTATACATAG+GGG | + | chr4_3:52260222-52260241 | Msa0646480:CDS | 40.0% | |
| !! | TGTATACATAGGGGGTGTTA+AGG | + | chr4_3:52260231-52260250 | Msa0646480:CDS | 40.0% |
| !!! | TTTTGGACTTGATGGTGCAA+AGG | + | chr4_3:52260270-52260289 | Msa0646480:CDS | 40.0% |
| AGTTAAACAGCCACATAGCT+AGG | + | chr4_3:52260433-52260452 | Msa0646480:three_prime_UTR | 40.0% | |
| TTTACACACACCTAGCTATG+TGG | - | chr4_3:52260446-52260465 | None:intergenic | 40.0% | |
| ! | TGACAAGAAGTATGCAGTGA+GGG | - | chr4_3:52260507-52260526 | None:intergenic | 40.0% |
| !! | ATACCCAGAAGTATCATGTC+GGG | + | chr4_3:52260540-52260559 | Msa0646480:three_prime_UTR | 40.0% |
| AAACCCGACATGATACTTCT+GGG | - | chr4_3:52260546-52260565 | None:intergenic | 40.0% | |
| TAAACCCGACATGATACTTC+TGG | - | chr4_3:52260547-52260566 | None:intergenic | 40.0% | |
| CTTCAGTGGTGCACTTACAA+AGG | + | chr4_3:52253311-52253330 | Msa0646480:five_prime_UTR | 45.0% | |
| CATCTCCTAGCATCTAGTTG+TGG | - | chr4_3:52254144-52254163 | None:intergenic | 45.0% | |
| AGATGCTAGGAGATGTTCAC+AGG | + | chr4_3:52254149-52254168 | Msa0646480:CDS | 45.0% | |
| CGGATACCAACATGAGTTGT+CGG | + | chr4_3:52254309-52254328 | Msa0646480:intron | 45.0% | |
| !! | CTTCTGATTGATGGTGTGTC+CGG | - | chr4_3:52254338-52254357 | None:intergenic | 45.0% |
| GCACAGACACTTCTGATTGA+TGG | - | chr4_3:52254347-52254366 | None:intergenic | 45.0% | |
| !! | CAGAAGTGTCTGTGCTACAT+AGG | + | chr4_3:52254352-52254371 | Msa0646480:intron | 45.0% |
| ATGTCTCTCCCTGATTCAGT+AGG | - | chr4_3:52254448-52254467 | None:intergenic | 45.0% | |
| TTATAACCTCGTCTGCAGAG+GGG | - | chr4_3:52254704-52254723 | None:intergenic | 45.0% | |
| ATGCCATTCGTGTGCTTTGT+CGG | + | chr4_3:52254911-52254930 | Msa0646480:CDS | 45.0% | |
| CCTCTCAATTTGGGTAAGGA+GGG | - | chr4_3:52254950-52254969 | None:intergenic | 45.0% | |
| ACCTCTCAATTTGGGTAAGG+AGG | - | chr4_3:52254951-52254970 | None:intergenic | 45.0% | |
| GAATCCAGTTGTTGCAAGTG+CGG | + | chr4_3:52254996-52255015 | Msa0646480:CDS | 45.0% | |
| TCAGGGTTTGTCTGAAAGTG+GGG | - | chr4_3:52255127-52255146 | None:intergenic | 45.0% | |
| CTCAGGGTTTGTCTGAAAGT+GGG | - | chr4_3:52255128-52255147 | None:intergenic | 45.0% | |
| TCTCAGGGTTTGTCTGAAAG+TGG | - | chr4_3:52255129-52255148 | None:intergenic | 45.0% | |
| TCTTGTACAATTTCACGCGC+TGG | + | chr4_3:52255201-52255220 | Msa0646480:CDS | 45.0% | |
| AAGCTTAAGCTGTCCACTGA+AGG | - | chr4_3:52255608-52255627 | None:intergenic | 45.0% | |
| TCGACTAGCAGTTAGCAAAC+TGG | + | chr4_3:52256097-52256116 | Msa0646480:CDS | 45.0% | |
| AACTGGTTACCAGCTTGACA+AGG | + | chr4_3:52256114-52256133 | Msa0646480:CDS | 45.0% | |
| ACTGGTTACCAGCTTGACAA+GGG | + | chr4_3:52256115-52256134 | Msa0646480:CDS | 45.0% | |
| ATCAAGAGACATTGGGCCAA+AGG | - | chr4_3:52256155-52256174 | None:intergenic | 45.0% | |
| CTTGATCCGTTACACAAGTC+AGG | + | chr4_3:52256169-52256188 | Msa0646480:CDS | 45.0% | |
| CTTATATAGTTGTCCCTGGG+AGG | + | chr4_3:52256206-52256225 | Msa0646480:intron | 45.0% | |
| ! | CTCGGCTAGTTACACCATTA+AGG | - | chr4_3:52256395-52256414 | None:intergenic | 45.0% |
| AGCTGAAGAACAGTGATTGC+TGG | - | chr4_3:52256426-52256445 | None:intergenic | 45.0% | |
| TGTCAACCTTGTTCAAGGTG+CGG | - | chr4_3:52256491-52256510 | None:intergenic | 45.0% | |
| !!! | GTGGTTTTGAACTTTGCAGG+TGG | + | chr4_3:52256705-52256724 | Msa0646480:intron | 45.0% |
| TTGCAGTTAGTGACTGCCAT+TGG | - | chr4_3:52256742-52256761 | None:intergenic | 45.0% | |
| ATCCCTGATGCTAAGGAAAG+TGG | + | chr4_3:52257181-52257200 | Msa0646480:CDS | 45.0% | |
| TCCCTGATGCTAAGGAAAGT+GGG | + | chr4_3:52257182-52257201 | Msa0646480:CDS | 45.0% | |
| ACCCACTTTCCTTAGCATCA+GGG | - | chr4_3:52257186-52257205 | None:intergenic | 45.0% | |
| AACCCACTTTCCTTAGCATC+AGG | - | chr4_3:52257187-52257206 | None:intergenic | 45.0% | |
| ATTCACTTACCTGTCGACAC+AGG | + | chr4_3:52257240-52257259 | Msa0646480:CDS | 45.0% | |
| ! | CCAAGGAAGTGGAGTATCTA+AGG | - | chr4_3:52257345-52257364 | None:intergenic | 45.0% |
| CCTTAGATACTCCACTTCCT+TGG | + | chr4_3:52257342-52257361 | Msa0646480:intron | 45.0% | |
| ! | TTGCTGGGGTCCAATGTTTT+TGG | - | chr4_3:52257378-52257397 | None:intergenic | 45.0% |
| GTGAGCACACTAGCCAAATT+TGG | + | chr4_3:52257459-52257478 | Msa0646480:CDS | 45.0% | |
| CCCGCATATTTGTTCTGCTA+AGG | + | chr4_3:52257609-52257628 | Msa0646480:CDS | 45.0% | |
| CATGTTTCCTCTTTGACTGC+AGG | + | chr4_3:52257973-52257992 | Msa0646480:intron | 45.0% | |
| ATGTCAAAAGCCTCTTCCGA+AGG | - | chr4_3:52258001-52258020 | None:intergenic | 45.0% | |
| !! | CATTAATTTGGTGCCCAAGG+AGG | + | chr4_3:52258018-52258037 | Msa0646480:CDS | 45.0% |
| TTTACCAGGGGCTTTCTTCT+CGG | - | chr4_3:52258062-52258081 | None:intergenic | 45.0% | |
| !!! | ACCAGTTGGCTTTTTACCAG+GGG | - | chr4_3:52258074-52258093 | None:intergenic | 45.0% |
| !!! | CACCAGTTGGCTTTTTACCA+GGG | - | chr4_3:52258075-52258094 | None:intergenic | 45.0% |
| TATGAATCCACAGTGGATGG+GGG | - | chr4_3:52258121-52258140 | None:intergenic | 45.0% | |
| CGTTGAAGATGAATACCAGC+TGG | + | chr4_3:52258906-52258925 | Msa0646480:CDS | 45.0% | |
| TGAAGATGAATACCAGCTGG+AGG | + | chr4_3:52258909-52258928 | Msa0646480:CDS | 45.0% | |
| !! | AAGTGGGGGTGTCTAATTTC+AGG | + | chr4_3:52258965-52258984 | Msa0646480:CDS | 45.0% |
| CATCCACTCGTTCAGAATCA+GGG | - | chr4_3:52259011-52259030 | None:intergenic | 45.0% | |
| TCATCCACTCGTTCAGAATC+AGG | - | chr4_3:52259012-52259031 | None:intergenic | 45.0% | |
| !! | CATCATTGGCTTACCTCACA+AGG | - | chr4_3:52259105-52259124 | None:intergenic | 45.0% |
| GAAGCCACAACTGACATCAT+TGG | - | chr4_3:52259119-52259138 | None:intergenic | 45.0% | |
| GAAAGTGAACGCCAACGTTT+GGG | - | chr4_3:52259339-52259358 | None:intergenic | 45.0% | |
| AGAAAGTGAACGCCAACGTT+TGG | - | chr4_3:52259340-52259359 | None:intergenic | 45.0% | |
| AAGAGATTCTCTGGTGCTTC+AGG | + | chr4_3:52259598-52259617 | Msa0646480:intron | 45.0% | |
| GGGATTGATCTTTGAGCCAT+GGG | - | chr4_3:52259641-52259660 | None:intergenic | 45.0% | |
| TGGGATTGATCTTTGAGCCA+TGG | - | chr4_3:52259642-52259661 | None:intergenic | 45.0% | |
| TCTATAACCTCGTTGTGGCA+GGG | - | chr4_3:52259793-52259812 | None:intergenic | 45.0% | |
| ATCTATAACCTCGTTGTGGC+AGG | - | chr4_3:52259794-52259813 | None:intergenic | 45.0% | |
| GGCCACTCGAGATAAAGTAT+TGG | + | chr4_3:52259909-52259928 | Msa0646480:intron | 45.0% | |
| ! | TGCTAACATCATCTGGAACC+TGG | + | chr4_3:52259942-52259961 | Msa0646480:intron | 45.0% |
| ! | GTTCTTTGGTGGTACTAGCA+TGG | - | chr4_3:52259994-52260013 | None:intergenic | 45.0% |
| GTGTGTGACCTTGAATTAGG+TGG | - | chr4_3:52260196-52260215 | None:intergenic | 45.0% | |
| TTGTCGGGTGTATACATAGG+GGG | + | chr4_3:52260223-52260242 | Msa0646480:CDS | 45.0% | |
| TGATGCCATCCATGAGATTG+TGG | + | chr4_3:52260339-52260358 | Msa0646480:CDS | 45.0% | |
| ATCCATGAGATTGTGGCAAG+CGG | + | chr4_3:52260346-52260365 | Msa0646480:CDS | 45.0% | |
| ! | CTGACAAGAAGTATGCAGTG+AGG | - | chr4_3:52260508-52260527 | None:intergenic | 45.0% |
| ! | ACTTCTGGGTATTGTTGCTG+AGG | - | chr4_3:52260532-52260551 | None:intergenic | 45.0% |
| !! | AGAAAATAATTAATAAATAA+AGG | - | chr4_3:52257516-52257535 | None:intergenic | 5.0% |
| GGTGGTGAATCTGTGAGATC+TGG | - | chr4_3:52253364-52253383 | None:intergenic | 50.0% | |
| CACAGATTCACCACCTTCTC+CGG | + | chr4_3:52253369-52253388 | Msa0646480:five_prime_UTR | 50.0% | |
| ACTTCGGTTAGGACTCAAGC+TGG | + | chr4_3:52253976-52253995 | Msa0646480:intron | 50.0% | |
| AAAGGGGGCTGTTCTTCAAG+AGG | + | chr4_3:52254101-52254120 | Msa0646480:CDS | 50.0% | |
| GTGCTGTGTCAGTGCTTCAT+TGG | - | chr4_3:52254224-52254243 | None:intergenic | 50.0% | |
| CAACATGAGTTGTCGGACTC+CGG | + | chr4_3:52254316-52254335 | Msa0646480:intron | 50.0% | |
| TATAACCTCGTCTGCAGAGG+GGG | - | chr4_3:52254703-52254722 | None:intergenic | 50.0% | |
| GATCCGACAAAGCACACGAA+TGG | - | chr4_3:52254917-52254936 | None:intergenic | 50.0% | |
| TCGTGTGCTTTGTCGGATCA+CGG | + | chr4_3:52254918-52254937 | Msa0646480:CDS | 50.0% | |
| CCCTCCTTACCCAAATTGAG+AGG | + | chr4_3:52254947-52254966 | Msa0646480:CDS | 50.0% | |
| CAGGGTTTGTCTGAAAGTGG+GGG | - | chr4_3:52255126-52255145 | None:intergenic | 50.0% | |
| AAGGTGGAGCAATGAGGTTC+AGG | + | chr4_3:52255156-52255175 | Msa0646480:CDS | 50.0% | |
| CTGGTTACCAGCTTGACAAG+GGG | + | chr4_3:52256116-52256135 | Msa0646480:CDS | 50.0% | |
| AACACTTCCCCTTGTCAAGC+TGG | - | chr4_3:52256126-52256145 | None:intergenic | 50.0% | |
| CCATTTCGGACTTGTGACGA+AGG | - | chr4_3:52256341-52256360 | None:intergenic | 50.0% | |
| CCTTCGTCACAAGTCCGAAA+TGG | + | chr4_3:52256338-52256357 | Msa0646480:CDS | 50.0% | |
| ! | GTTGATTCTCTCCCTTCTGG+AGG | + | chr4_3:52256554-52256573 | Msa0646480:intron | 50.0% |
| AGCAAAATGCGCCTCCAGAA+GGG | - | chr4_3:52256568-52256587 | None:intergenic | 50.0% | |
| AAGCAAAATGCGCCTCCAGA+AGG | - | chr4_3:52256569-52256588 | None:intergenic | 50.0% | |
| GGTGGCAATGACACATCCAA+TGG | + | chr4_3:52256723-52256742 | Msa0646480:intron | 50.0% | |
| GTGTGGCAATGCTTCTGTTC+TGG | - | chr4_3:52256792-52256811 | None:intergenic | 50.0% | |
| ! | CTCCACTTCCTTGGCATTGA+AGG | + | chr4_3:52257351-52257370 | Msa0646480:CDS | 50.0% |
| GTCCTTCAATGCCAAGGAAG+TGG | - | chr4_3:52257356-52257375 | None:intergenic | 50.0% | |
| GGATATCAAGTGAGCCGAAG+AGG | - | chr4_3:52257866-52257885 | None:intergenic | 50.0% | |
| TGATATCCCGCTCGTCAATC+TGG | + | chr4_3:52257878-52257897 | Msa0646480:CDS | 50.0% | |
| TCTTTGACTGCAGGAGCCTT+CGG | + | chr4_3:52257982-52258001 | Msa0646480:intron | 50.0% | |
| !!! | CCACCAGTTGGCTTTTTACC+AGG | - | chr4_3:52258076-52258095 | None:intergenic | 50.0% |
| CCTGGTAAAAAGCCAACTGG+TGG | + | chr4_3:52258073-52258092 | Msa0646480:CDS | 50.0% | |
| TCTGCTTCAGTAAGCTCCAC+AGG | - | chr4_3:52258312-52258331 | None:intergenic | 50.0% | |
| AGGAAGAGATCTGAGGGGTT+TGG | - | chr4_3:52258569-52258588 | None:intergenic | 50.0% | |
| GTCTGCCCAGGTGAATCATA+AGG | - | chr4_3:52258589-52258608 | None:intergenic | 50.0% | |
| ! | TTCACCTGGGCAGACTTTTG+TGG | + | chr4_3:52258594-52258613 | Msa0646480:CDS | 50.0% |
| ATACCAGCTGGAGGATCTAG+AGG | + | chr4_3:52258918-52258937 | Msa0646480:CDS | 50.0% | |
| GGAGGATCTAGAGGTTGTTG+CGG | + | chr4_3:52258927-52258946 | Msa0646480:CDS | 50.0% | |
| CGAGTGGATGAATACGGTCT+TGG | + | chr4_3:52259021-52259040 | Msa0646480:CDS | 50.0% | |
| ATGAATACGGTCTTGGCCCA+AGG | + | chr4_3:52259028-52259047 | Msa0646480:CDS | 50.0% | |
| TGAATACGGTCTTGGCCCAA+GGG | + | chr4_3:52259029-52259048 | Msa0646480:CDS | 50.0% | |
| TCTTGGCATGCAACCTTGTG+AGG | + | chr4_3:52259089-52259108 | Msa0646480:CDS | 50.0% | |
| ! | GGAGAGCATAACCCAAACGT+TGG | + | chr4_3:52259325-52259344 | Msa0646480:intron | 50.0% |
| GTGAACATGTGCTTGCACAC+AGG | + | chr4_3:52259550-52259569 | Msa0646480:intron | 50.0% | |
| AGGTCGTCCCACCTAATTCA+AGG | + | chr4_3:52260185-52260204 | Msa0646480:CDS | 50.0% | |
| ! | GGGGTGTTAAGGTACTTGTG+CGG | + | chr4_3:52260242-52260261 | Msa0646480:CDS | 50.0% |
| ! | GTACTTGTGCGGCTGTCTTT+TGG | + | chr4_3:52260253-52260272 | Msa0646480:CDS | 50.0% |
| ! | CGGCTGTCTTTTGGACTTGA+TGG | + | chr4_3:52260262-52260281 | Msa0646480:CDS | 50.0% |
| GCTTGCCACAATCTCATGGA+TGG | - | chr4_3:52260347-52260366 | None:intergenic | 50.0% | |
| AACCGCTTGCCACAATCTCA+TGG | - | chr4_3:52260351-52260370 | None:intergenic | 50.0% | |
| CAGCACAACACAGTCGACAC+TGG | + | chr4_3:52254238-52254257 | Msa0646480:intron | 55.0% | |
| CGGAGTCCGACAACTCATGT+TGG | - | chr4_3:52254318-52254337 | None:intergenic | 55.0% | |
| CGTCACGAGCTCTCTCATGA+AGG | + | chr4_3:52254855-52254874 | Msa0646480:CDS | 55.0% | |
| GTGCTTTGTCGGATCACGGA+TGG | + | chr4_3:52254922-52254941 | Msa0646480:CDS | 55.0% | |
| !! | GGGAAGTGTTCGCTCACCTT+TGG | + | chr4_3:52256136-52256155 | Msa0646480:CDS | 55.0% |
| CTGCAGGTTATTCGCGAGTC+AGG | + | chr4_3:52256264-52256283 | Msa0646480:intron | 55.0% | |
| TGCTGTCCGCACCTTGAACA+AGG | + | chr4_3:52256482-52256501 | Msa0646480:CDS | 55.0% | |
| GATGCGAGGGACTTCCTCTT+CGG | + | chr4_3:52257849-52257868 | Msa0646480:CDS | 55.0% | |
| TGGTCTCCAGATTGACGAGC+GGG | - | chr4_3:52257887-52257906 | None:intergenic | 55.0% | |
| CTGGTCTCCAGATTGACGAG+CGG | - | chr4_3:52257888-52257907 | None:intergenic | 55.0% | |
| GAAGGCTCCTGCAGTCAAAG+AGG | - | chr4_3:52257983-52258002 | None:intergenic | 55.0% | |
| GGCTGAGACTTGACCTCCTT+GGG | - | chr4_3:52258034-52258053 | None:intergenic | 55.0% | |
| AGGCTGAGACTTGACCTCCT+TGG | - | chr4_3:52258035-52258054 | None:intergenic | 55.0% | |
| GCCCCTGGTAAAAAGCCAAC+TGG | + | chr4_3:52258070-52258089 | Msa0646480:CDS | 55.0% | |
| GTTTGGGTGCTCCTCCTAGT+GGG | + | chr4_3:52258095-52258114 | Msa0646480:CDS | 55.0% | |
| TTACCAGTCCTCAGCACCTG+TGG | + | chr4_3:52258293-52258312 | Msa0646480:intron | 55.0% | |
| ! | AGTAAGCTCCACAGGTGCTG+AGG | - | chr4_3:52258304-52258323 | None:intergenic | 55.0% |
| AACGCCACAAAAGTCTGCCC+AGG | - | chr4_3:52258601-52258620 | None:intergenic | 55.0% | |
| TGTGGCGTTTGAGAAGCCTG+AGG | + | chr4_3:52258612-52258631 | Msa0646480:CDS | 55.0% | |
| GTGGCGTTTGAGAAGCCTGA+GGG | + | chr4_3:52258613-52258632 | Msa0646480:CDS | 55.0% | |
| CCAGATGTTGGCAATCCCTC+AGG | - | chr4_3:52258631-52258650 | None:intergenic | 55.0% | |
| CCTGAGGGATTGCCAACATC+TGG | + | chr4_3:52258628-52258647 | Msa0646480:CDS | 55.0% | |
| ATCATCTTCAGCCTCGCCAG+AGG | - | chr4_3:52258884-52258903 | None:intergenic | 55.0% | |
| TCTGGCGAGGCTGAAGATGA+TGG | + | chr4_3:52258883-52258902 | Msa0646480:CDS | 55.0% | |
| CAACCTCTAGATCCTCCAGC+TGG | - | chr4_3:52258924-52258943 | None:intergenic | 55.0% | |
| CAGGAACGCATGGGAAAGCA+TGG | + | chr4_3:52258984-52259003 | Msa0646480:CDS | 55.0% | |
| GGACCCTGATTCTGAACGAG+TGG | + | chr4_3:52259005-52259024 | Msa0646480:CDS | 55.0% | |
| CTTCGGACAAGCCTTCCCTT+GGG | - | chr4_3:52259047-52259066 | None:intergenic | 55.0% | |
| GTCAAATCCCTGCCACAACG+AGG | + | chr4_3:52259783-52259802 | Msa0646480:intron | 55.0% | |
| TCACTACTTGCAGGGCACAG+AGG | + | chr4_3:52260165-52260184 | Msa0646480:intron | 55.0% | |
| TTCACCACCTTCTCCGGCGA+TGG | + | chr4_3:52253375-52253394 | Msa0646480:exon | 60.0% | |
| ATAAGCGGCTGAGCCATCGC+CGG | - | chr4_3:52253391-52253410 | None:intergenic | 60.0% | |
| GACGATGACCGTGACGACGA+AGG | + | chr4_3:52253418-52253437 | Msa0646480:CDS | 60.0% | |
| GGGCTGTTCTTCAAGAGGCC+CGG | + | chr4_3:52254106-52254125 | Msa0646480:CDS | 60.0% | |
| GGCTGTTCTTCAAGAGGCCC+GGG | + | chr4_3:52254107-52254126 | Msa0646480:CDS | 60.0% | |
| ACTTTCCCCCTCTGCAGACG+AGG | + | chr4_3:52254695-52254714 | Msa0646480:CDS | 60.0% | |
| AGGGCCGCACTTGCAACAAC+TGG | - | chr4_3:52255003-52255022 | None:intergenic | 60.0% | |
| GCAAGTGCGGCCCTAGTTAG+TGG | + | chr4_3:52255009-52255028 | Msa0646480:CDS | 60.0% | |
| !! | CGCGCTGGCTTTGCTACATC+AGG | + | chr4_3:52255216-52255235 | Msa0646480:CDS | 60.0% |
| GGCTAGTGTGCTCACAGCAC+TGG | - | chr4_3:52257454-52257473 | None:intergenic | 60.0% | |
| ACTGCAGGAGCCTTCGGAAG+AGG | + | chr4_3:52257988-52258007 | Msa0646480:intron | 60.0% | |
| GGGGCTTTCTTCTCGGCAAG+AGG | - | chr4_3:52258055-52258074 | None:intergenic | 60.0% | |
| CTTGCCGAGAAGAAAGCCCC+TGG | + | chr4_3:52258055-52258074 | Msa0646480:CDS | 60.0% | |
| ! | GGAGCACCCAAACCACCAGT+TGG | - | chr4_3:52258088-52258107 | None:intergenic | 60.0% |
| GGTTTGGGTGCTCCTCCTAG+TGG | + | chr4_3:52258094-52258113 | Msa0646480:CDS | 60.0% | |
| ! | GACCAGGTTGACCCAACCTC+TGG | + | chr4_3:52258865-52258884 | Msa0646480:intron | 60.0% |
| CTTCAGCCTCGCCAGAGGTT+GGG | - | chr4_3:52258879-52258898 | None:intergenic | 60.0% | |
| TCTTCAGCCTCGCCAGAGGT+TGG | - | chr4_3:52258880-52258899 | None:intergenic | 60.0% | |
| TACGGTCTTGGCCCAAGGGA+AGG | + | chr4_3:52259033-52259052 | Msa0646480:CDS | 60.0% | |
| GCTTCGGACAAGCCTTCCCT+TGG | - | chr4_3:52259048-52259067 | None:intergenic | 60.0% | |
| GCTACTCATGGGCGTCCTTG+TGG | - | chr4_3:52259487-52259506 | None:intergenic | 60.0% | |
| TGAGCCATCGCCGGAGAAGG+TGG | - | chr4_3:52253382-52253401 | None:intergenic | 65.0% | |
| ACAGTGGATGGGGGCCCACT+AGG | - | chr4_3:52258112-52258131 | None:intergenic | 65.0% | |
| ! | TAGTGGGCCCCCATCCACTG+TGG | + | chr4_3:52258111-52258130 | Msa0646480:CDS | 65.0% |
| !! | GCTCCACAGGTGCTGAGGAC+TGG | - | chr4_3:52258299-52258318 | None:intergenic | 65.0% |
| CGCCAGAGGTTGGGTCAACC+TGG | - | chr4_3:52258870-52258889 | None:intergenic | 65.0% | |
| GGTTGACCCAACCTCTGGCG+AGG | + | chr4_3:52258870-52258889 | Msa0646480:intron | 65.0% | |
| GGCTGAGCCATCGCCGGAGA+AGG | - | chr4_3:52253385-52253404 | None:intergenic | 70.0% | |
| GTGGATGGGGGCCCACTAGG+AGG | - | chr4_3:52258109-52258128 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 52253246 | 52260796 | 52253246 | ID=Msa0646480;Name=Msa0646480 |
| chr4_3 | mRNA | 52253246 | 52260796 | 52253246 | ID=Msa0646480-mRNA-1;Parent=Msa0646480;Name=Msa0646480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=148|0.87|0.94|1|0.87|0.94|17|424|857 |
| chr4_3 | exon | 52253246 | 52253439 | 52253246 | ID=Msa0646480-mRNA-1:exon:12753;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52254073 | 52254170 | 52254073 | ID=Msa0646480-mRNA-1:exon:12754;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52254603 | 52254716 | 52254603 | ID=Msa0646480-mRNA-1:exon:12755;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52254847 | 52255047 | 52254847 | ID=Msa0646480-mRNA-1:exon:12756;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52255136 | 52255237 | 52255136 | ID=Msa0646480-mRNA-1:exon:12757;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52256083 | 52256190 | 52256083 | ID=Msa0646480-mRNA-1:exon:12758;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52256270 | 52256503 | 52256270 | ID=Msa0646480-mRNA-1:exon:12759;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52256724 | 52256941 | 52256724 | ID=Msa0646480-mRNA-1:exon:12760;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52257090 | 52257261 | 52257090 | ID=Msa0646480-mRNA-1:exon:12761;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52257348 | 52257503 | 52257348 | ID=Msa0646480-mRNA-1:exon:12762;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52257608 | 52257658 | 52257608 | ID=Msa0646480-mRNA-1:exon:12763;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52257789 | 52257920 | 52257789 | ID=Msa0646480-mRNA-1:exon:12764;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52257995 | 52258195 | 52257995 | ID=Msa0646480-mRNA-1:exon:12765;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52258300 | 52258431 | 52258300 | ID=Msa0646480-mRNA-1:exon:12766;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52258514 | 52258687 | 52258514 | ID=Msa0646480-mRNA-1:exon:12767;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52258871 | 52259110 | 52258871 | ID=Msa0646480-mRNA-1:exon:12768;Parent=Msa0646480-mRNA-1 |
| chr4_3 | exon | 52260178 | 52260796 | 52260178 | ID=Msa0646480-mRNA-1:exon:12769;Parent=Msa0646480-mRNA-1 |
| chr4_3 | five_prime_UTR | 52253246 | 52253393 | 52253246 | ID=Msa0646480-mRNA-1:five_prime_utr;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52253394 | 52253439 | 52253394 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52254073 | 52254170 | 52254073 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52254603 | 52254716 | 52254603 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52254847 | 52255047 | 52254847 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52255136 | 52255237 | 52255136 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52256083 | 52256190 | 52256083 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52256270 | 52256503 | 52256270 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52256724 | 52256941 | 52256724 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52257090 | 52257261 | 52257090 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52257348 | 52257503 | 52257348 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52257608 | 52257658 | 52257608 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52257789 | 52257920 | 52257789 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52257995 | 52258195 | 52257995 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52258300 | 52258431 | 52258300 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52258514 | 52258687 | 52258514 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52258871 | 52259110 | 52258871 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | CDS | 52260178 | 52260372 | 52260178 | ID=Msa0646480-mRNA-1:cds;Parent=Msa0646480-mRNA-1 |
| chr4_3 | three_prime_UTR | 52260373 | 52260796 | 52260373 | ID=Msa0646480-mRNA-1:three_prime_utr;Parent=Msa0646480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
