Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605530 | XP_003606893.1 | 96.158 | 885 | 6 | 2 | 1 | 857 | 1 | 885 | 0.0 | 1719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605530 | sp|Q0WW26|COPG_ARATH | 82.525 | 887 | 124 | 4 | 1 | 857 | 1 | 886 | 0.0 | 1492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605530 | G7JG50 | 96.158 | 885 | 6 | 2 | 1 | 857 | 1 | 885 | 0.0 | 1719 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0605530 | 0.851652 | 7.717790e-61 | -8.615850e-47 |
| Msa0026940 | Msa0605530 | 0.837409 | 5.287079e-57 | -8.615850e-47 |
| Msa0035730 | Msa0605530 | 0.816223 | 6.178980e-52 | -8.615850e-47 |
| Msa0046970 | Msa0605530 | 0.801563 | 8.486716e-49 | -8.615850e-47 |
| Msa0047000 | Msa0605530 | 0.814075 | 1.852846e-51 | -8.615850e-47 |
| Msa0074790 | Msa0605530 | 0.803408 | 3.536936e-49 | -8.615850e-47 |
| Msa0605530 | Msa0606120 | 0.813937 | 1.987906e-51 | -8.615850e-47 |
| Msa0605530 | Msa0608820 | 0.809386 | 1.941193e-50 | -8.615850e-47 |
| Msa0605530 | Msa0642550 | 0.810702 | 1.010596e-50 | -8.615850e-47 |
| Msa0605530 | Msa0646480 | 0.884407 | 1.968942e-71 | -8.615850e-47 |
| Msa0605530 | Msa0647070 | 0.815545 | 8.750261e-52 | -8.615850e-47 |
| Msa0605530 | Msa0661480 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
| Msa0605530 | Msa0681050 | 0.813712 | 2.227348e-51 | -8.615850e-47 |
| Msa0605530 | Msa0686100 | 0.870708 | 1.189782e-66 | -8.615850e-47 |
| Msa0605530 | Msa0691610 | 0.805230 | 1.475770e-49 | -8.615850e-47 |
| Msa0605530 | Msa0701890 | 0.829953 | 3.856876e-55 | -8.615850e-47 |
| Msa0605530 | Msa0713080 | 0.810054 | 1.394971e-50 | -8.615850e-47 |
| Msa0605530 | Msa0716890 | 0.808439 | 3.095371e-50 | -8.615850e-47 |
| Msa0605530 | Msa0746650 | 0.800154 | 1.646078e-48 | -8.615850e-47 |
| Msa0605530 | Msa0773960 | 0.819467 | 1.143893e-52 | -8.615850e-47 |
| Msa0605530 | Msa0799450 | 0.863413 | 2.534224e-64 | -8.615850e-47 |
| Msa0605530 | Msa0837710 | 0.860913 | 1.482636e-63 | -8.615850e-47 |
| Msa0605530 | Msa0930770 | 0.877848 | 4.521337e-69 | -8.615850e-47 |
| Msa0605530 | Msa0982730 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0605530 | Msa1019200 | 0.808687 | 2.739907e-50 | -8.615850e-47 |
| Msa0605530 | Msa1027330 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
| Msa0605530 | Msa1027390 | 0.827599 | 1.430901e-54 | -8.615850e-47 |
| Msa0605530 | Msa1027470 | 0.801177 | 1.018235e-48 | -8.615850e-47 |
| Msa0605530 | Msa1068710 | 0.808590 | 2.874819e-50 | -8.615850e-47 |
| Msa0605530 | Msa1084910 | 0.816366 | 5.738602e-52 | -8.615850e-47 |
| Msa0605530 | Msa1111060 | 0.821612 | 3.681090e-53 | -8.615850e-47 |
| Msa0605530 | Msa1219830 | 0.849274 | 3.591137e-60 | -8.615850e-47 |
| Msa0605530 | Msa1226370 | 0.809258 | 2.068224e-50 | -8.615850e-47 |
| Msa0605530 | Msa1339200 | 0.837388 | 5.354266e-57 | -8.615850e-47 |
| Msa0605530 | Msa1347390 | 0.822771 | 1.981532e-53 | -8.615850e-47 |
| Msa0605530 | Msa1365820 | 0.808109 | 3.639565e-50 | -8.615850e-47 |
| Msa0605530 | Msa1396100 | 0.823821 | 1.126846e-53 | -8.615850e-47 |
| Msa0605530 | Msa1401510 | 0.857300 | 1.793297e-62 | -8.615850e-47 |
| Msa0605530 | Msa1406090 | 0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa0605530 | Msa1444940 | 0.808973 | 2.380100e-50 | -8.615850e-47 |
| Msa0167090 | Msa0605530 | 0.823939 | 1.057085e-53 | -8.615850e-47 |
| Msa0195230 | Msa0605530 | 0.869080 | 4.048478e-66 | -8.615850e-47 |
| Msa0195260 | Msa0605530 | 0.869887 | 2.210932e-66 | -8.615850e-47 |
| Msa0197140 | Msa0605530 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa0234170 | Msa0605530 | 0.804643 | 1.957524e-49 | -8.615850e-47 |
| Msa0368640 | Msa0605530 | 0.804274 | 2.336872e-49 | -8.615850e-47 |
| Msa0382220 | Msa0605530 | 0.801799 | 7.591769e-49 | -8.615850e-47 |
| Msa0389690 | Msa0605530 | 0.831864 | 1.310924e-55 | -8.615850e-47 |
| Msa0402770 | Msa0605530 | 0.810808 | 9.587242e-51 | -8.615850e-47 |
| Msa0422150 | Msa0605530 | 0.801134 | 1.039040e-48 | -8.615850e-47 |
| Msa0427420 | Msa0605530 | 0.853404 | 2.443481e-61 | -8.615850e-47 |
| Msa0427480 | Msa0605530 | 0.854465 | 1.209172e-61 | -8.615850e-47 |
| Msa0427760 | Msa0605530 | 0.829005 | 6.556949e-55 | -8.615850e-47 |
| Msa0427950 | Msa0605530 | 0.805865 | 1.086062e-49 | -8.615850e-47 |
| Msa0436100 | Msa0605530 | 0.814797 | 1.283075e-51 | -8.615850e-47 |
| Msa0463530 | Msa0605530 | 0.812182 | 4.821233e-51 | -8.615850e-47 |
| Msa0240540 | Msa0605530 | 0.859981 | 2.837863e-63 | -8.615850e-47 |
| Msa0268110 | Msa0605530 | 0.860009 | 2.784402e-63 | -8.615850e-47 |
| Msa0276850 | Msa0605530 | 0.811518 | 6.724644e-51 | -8.615850e-47 |
| Msa0276860 | Msa0605530 | 0.839756 | 1.310222e-57 | -8.615850e-47 |
| Msa0279000 | Msa0605530 | 0.879339 | 1.350535e-69 | -8.615850e-47 |
| Msa0318410 | Msa0605530 | 0.803689 | 3.092334e-49 | -8.615850e-47 |
| Msa0506750 | Msa0605530 | 0.826631 | 2.440416e-54 | -8.615850e-47 |
| Msa0518320 | Msa0605530 | 0.803714 | 3.056026e-49 | -8.615850e-47 |
| Msa0525880 | Msa0605530 | 0.870651 | 1.241934e-66 | -8.615850e-47 |
| Msa0532160 | Msa0605530 | 0.817549 | 3.113440e-52 | -8.615850e-47 |
| Msa0545920 | Msa0605530 | 0.818098 | 2.340324e-52 | -8.615850e-47 |
| Msa0550020 | Msa0605530 | 0.867287 | 1.529246e-65 | -8.615850e-47 |
| Msa0574900 | Msa0605530 | 0.855394 | 6.496837e-62 | -8.615850e-47 |
| Msa0586450 | Msa0605530 | 0.813943 | 1.981561e-51 | -8.615850e-47 |
| Msa0601720 | Msa0605530 | 0.816617 | 5.042962e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605530 | MtrunA17_Chr4g0034881 | 96.158 | 885 | 6 | 2 | 1 | 857 | 1 | 885 | 0.0 | 1719 |
| Msa0605530 | MtrunA17_Chr3g0144501 | 86.937 | 888 | 84 | 4 | 1 | 857 | 1 | 887 | 0.0 | 1571 |
| Msa0605530 | MtrunA17_Chr4g0038901 | 20.169 | 590 | 400 | 16 | 50 | 585 | 48 | 620 | 7.35e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605530 | AT4G34450.1 | 82.525 | 887 | 124 | 4 | 1 | 857 | 1 | 886 | 0.0 | 1492 |
| Msa0605530 | AT2G16200.1 | 63.768 | 69 | 25 | 0 | 789 | 857 | 1 | 69 | 2.67e-24 | 97.4 |
| Msa0605530 | AT2G16200.2 | 63.077 | 65 | 24 | 0 | 793 | 857 | 19 | 83 | 4.80e-22 | 91.3 |
| Msa0605530 | AT4G23460.1 | 19.727 | 512 | 352 | 15 | 50 | 521 | 48 | 540 | 2.94e-11 | 67.8 |
Find 247 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGAATTATATCTTGTATT+TGG | 0.076600 | 4_2:+51468656 | Msa0605530:three_prime_UTR |
| TGCGGCCTAAATTTGTATTT+TGG | 0.169381 | 4_2:+51468356 | Msa0605530:three_prime_UTR |
| GTTTCAAATACCTCTCAATT+TGG | 0.170952 | 4_2:-51462965 | None:intergenic |
| TACGTACTTAATTGTGTATT+TGG | 0.171251 | 4_2:+51468689 | Msa0605530:three_prime_UTR |
| ATTTCCTGAGTAACATTCTT+AGG | 0.185985 | 4_2:+51465095 | Msa0605530:CDS |
| AATCACCAAAATACAAATTT+AGG | 0.251698 | 4_2:-51468361 | None:intergenic |
| GTACTTGTGCGGCTGTCTTT+TGG | 0.253038 | 4_2:+51468206 | Msa0605530:CDS |
| CATTGAGAAAACAAATATTA+TGG | 0.255718 | 4_2:-51468594 | None:intergenic |
| TGCTTCTGTTGATGGATTAA+AGG | 0.267375 | 4_2:+51465482 | Msa0605530:CDS |
| ATCAACAGAAGCACCAAATT+TGG | 0.272603 | 4_2:-51465472 | None:intergenic |
| TAAACCCGACATGATACTTC+TGG | 0.288101 | 4_2:-51468497 | None:intergenic |
| GGGAAAGTTCCTTTATTATC+AGG | 0.294554 | 4_2:-51462688 | None:intergenic |
| CAGAATTATATCTTGTATTT+GGG | 0.297391 | 4_2:+51468657 | Msa0605530:three_prime_UTR |
| AAATTTACACTGGTTCGTTC+AGG | 0.315028 | 4_2:+51468713 | Msa0605530:three_prime_UTR |
| CTCGGCTAGTTACACCATTA+AGG | 0.316336 | 4_2:-51464391 | None:intergenic |
| CACTAACTGCAACATTGATA+TGG | 0.316771 | 4_2:+51464750 | Msa0605530:CDS |
| CACAATACCCGAACAACTAT+TGG | 0.321464 | 4_2:+51466404 | Msa0605530:CDS |
| TCATCCACTCGTTCAGAATC+AGG | 0.322426 | 4_2:-51467009 | None:intergenic |
| TTTCAAATACCTCTCAATTT+GGG | 0.330735 | 4_2:-51462964 | None:intergenic |
| ATTCCTGAGTTTGCAAACTT+TGG | 0.335169 | 4_2:+51466160 | Msa0605530:CDS |
| GTGTGGCAATGCTTCTGTTC+TGG | 0.335873 | 4_2:-51464789 | None:intergenic |
| AATACTGTCATCACTCTTCT+TGG | 0.336080 | 4_2:+51467072 | Msa0605530:CDS |
| ATTAAGTATAATTATGACTA+TGG | 0.337761 | 4_2:-51468533 | None:intergenic |
| TCAGGAAATATTACACAATC+AGG | 0.339131 | 4_2:+51464281 | Msa0605530:CDS |
| ACATCTTCCAATAGTTGTTC+GGG | 0.350910 | 4_2:-51466411 | None:intergenic |
| TACATCTTCCAATAGTTGTT+CGG | 0.354992 | 4_2:-51466412 | None:intergenic |
| CTCCACTTCCTTGGCATTGA+AGG | 0.364156 | 4_2:+51465351 | Msa0605530:CDS |
| ATGCCATTCGTGTGCTTTGT+CGG | 0.366102 | 4_2:+51462919 | Msa0605530:CDS |
| AAATTTGGTGCTTCTGTTGA+TGG | 0.368371 | 4_2:+51465474 | Msa0605530:CDS |
| TTCCTGAGTTTGCAAACTTT+GGG | 0.370603 | 4_2:+51466161 | Msa0605530:CDS |
| AAGGTGGAGCAATGAGGTTC+AGG | 0.374504 | 4_2:+51463164 | Msa0605530:CDS |
| AAGGCAATTACAGACCTTAA+TGG | 0.375353 | 4_2:+51464377 | Msa0605530:CDS |
| TTTACCAGGGGCTTTCTTCT+CGG | 0.376153 | 4_2:-51466059 | None:intergenic |
| ACGTACTTAATTGTGTATTT+GGG | 0.379870 | 4_2:+51468690 | Msa0605530:three_prime_UTR |
| CAAATCCTGAGATTGTAAAA+AGG | 0.381855 | 4_2:+51463145 | Msa0605530:CDS |
| AATATACCGAATATATTTGC+TGG | 0.382125 | 4_2:-51465391 | None:intergenic |
| GTGAGCACACTAGCCAAATT+TGG | 0.386077 | 4_2:+51465459 | Msa0605530:CDS |
| TGATATCCCGCTCGTCAATC+TGG | 0.391883 | 4_2:+51465878 | Msa0605530:CDS |
| GGCTGAGACTTGACCTCCTT+GGG | 0.395700 | 4_2:-51466031 | None:intergenic |
| CCAGATGTTGGCAATCCCTC+AGG | 0.396127 | 4_2:-51466628 | None:intergenic |
| AGGGCCGCACTTGCAACAAC+TGG | 0.399353 | 4_2:-51463008 | None:intergenic |
| AACCCACTTTCCTTAGCATC+AGG | 0.400667 | 4_2:-51465184 | None:intergenic |
| CGCGCTGGCTTTGCTACATC+AGG | 0.401512 | 4_2:+51463224 | Msa0605530:CDS |
| ACTTTCAAGAAAATCATAGA+AGG | 0.405493 | 4_2:-51464312 | None:intergenic |
| AGCTGAAGAACAGTGATTGC+TGG | 0.407442 | 4_2:-51464422 | None:intergenic |
| ATCTCGAGAATGCAACTGTT+AGG | 0.414312 | 4_2:+51465427 | Msa0605530:CDS |
| CCTGAGGGATTGCCAACATC+TGG | 0.415471 | 4_2:+51466628 | Msa0605530:CDS |
| ATAGTAAGACTGATATGTAT+AGG | 0.417992 | 4_2:+51462892 | Msa0605530:CDS |
| TCTGAGATTTATTGTTAAAG+AGG | 0.421358 | 4_2:+51466666 | Msa0605530:CDS |
| AGGAAGAGATCTGAGGGGTT+TGG | 0.422472 | 4_2:-51466566 | None:intergenic |
| GGGAAGTGTTCGCTCACCTT+TGG | 0.422783 | 4_2:+51464135 | Msa0605530:CDS |
| GCTTCGGACAAGCCTTCCCT+TGG | 0.423385 | 4_2:-51467045 | None:intergenic |
| TTAGAAAACTTTCCAGATGT+TGG | 0.424560 | 4_2:-51466640 | None:intergenic |
| TTAACCCAAGATCTCGAGAT+TGG | 0.432181 | 4_2:-51462652 | None:intergenic |
| AATGGTGTACCTGATAATAA+AGG | 0.432582 | 4_2:+51462679 | Msa0605530:CDS |
| CCAAATACAAGATATAATTC+TGG | 0.436475 | 4_2:-51468656 | None:intergenic |
| GAGAATGTCAACCTTGTTCA+AGG | 0.437546 | 4_2:-51464492 | None:intergenic |
| CTGCAGGTTATTCGCGAGTC+AGG | 0.437953 | 4_2:+51464263 | Msa0605530:intron |
| TCTTTGACTGCAGGAGCCTT+CGG | 0.438517 | 4_2:+51465982 | Msa0605530:intron |
| CTTCAGCCTCGCCAGAGGTT+GGG | 0.441129 | 4_2:-51466876 | None:intergenic |
| TAGTAAGACTGATATGTATA+GGG | 0.441624 | 4_2:+51462893 | Msa0605530:CDS |
| GGCTAGTGTGCTCACAGCAC+TGG | 0.441877 | 4_2:-51465451 | None:intergenic |
| CACAGATTCACCACCTTCTC+CGG | 0.443477 | 4_2:+51461377 | Msa0605530:five_prime_UTR |
| ACAGCAGCAAATCTCAATAC+TGG | 0.445031 | 4_2:-51464464 | None:intergenic |
| AGGCTGAGACTTGACCTCCT+TGG | 0.447016 | 4_2:-51466032 | None:intergenic |
| GGGCTGTTCTTCAAGAGGCC+CGG | 0.450990 | 4_2:+51462114 | Msa0605530:CDS |
| TATTGTCGGGTGTATACATA+GGG | 0.451006 | 4_2:+51468174 | Msa0605530:CDS |
| TCTTCAGCCTCGCCAGAGGT+TGG | 0.451809 | 4_2:-51466877 | None:intergenic |
| ATTCCAGGTTATTGTAGTTG+TGG | 0.452428 | 4_2:+51466507 | Msa0605530:intron |
| TTCCCAAAGTTTGCAAACTC+AGG | 0.454897 | 4_2:-51466163 | None:intergenic |
| CTTTATCTTAACACACTTGG+AGG | 0.455687 | 4_2:+51465807 | Msa0605530:CDS |
| CCTTAGATACTCCACTTCCT+TGG | 0.456772 | 4_2:+51465342 | Msa0605530:intron |
| TCAACATATCTTGACTTGAA+TGG | 0.457042 | 4_2:-51468328 | None:intergenic |
| AATTTGTAATCTGCTTCATA+AGG | 0.458318 | 4_2:-51464861 | None:intergenic |
| GTCCTTCAATGCCAAGGAAG+TGG | 0.461397 | 4_2:-51465353 | None:intergenic |
| TGGACCCCAGCAAATATATT+CGG | 0.466206 | 4_2:+51465385 | Msa0605530:CDS |
| ACCTCTCAATTTGGGTAAGG+AGG | 0.467875 | 4_2:-51462956 | None:intergenic |
| TTTCCTGAGTAACATTCTTA+GGG | 0.469038 | 4_2:+51465096 | Msa0605530:CDS |
| GGCTGTTCTTCAAGAGGCCC+GGG | 0.470531 | 4_2:+51462115 | Msa0605530:CDS |
| CTTCGGACAAGCCTTCCCTT+GGG | 0.471166 | 4_2:-51467044 | None:intergenic |
| CATGTGTGTGACCTTGAATT+AGG | 0.473080 | 4_2:-51468149 | None:intergenic |
| CGAGTGGATGAATACGGTCT+TGG | 0.474887 | 4_2:+51467021 | Msa0605530:CDS |
| AATCTCGAGATCTTGGGTTA+AGG | 0.475513 | 4_2:+51462654 | Msa0605530:CDS |
| AAAGGATGTTGCAATGAAAC+TGG | 0.479392 | 4_2:+51468241 | Msa0605530:CDS |
| AAACCCGACATGATACTTCT+GGG | 0.480836 | 4_2:-51468496 | None:intergenic |
| GTTTGGGTGCTCCTCCTAGT+GGG | 0.481200 | 4_2:+51466095 | Msa0605530:CDS |
| ACTGCAGGAGCCTTCGGAAG+AGG | 0.482502 | 4_2:+51465988 | Msa0605530:intron |
| TCGACTAGCAGTTAGCAAAC+TGG | 0.484708 | 4_2:+51464096 | Msa0605530:CDS |
| TGATTGCTGGAGTTAATTCT+CGG | 0.485049 | 4_2:-51464409 | None:intergenic |
| AACACTTCCCCTTGTCAAGC+TGG | 0.485369 | 4_2:-51464122 | None:intergenic |
| TCGTGTGCTTTGTCGGATCA+CGG | 0.486313 | 4_2:+51462926 | Msa0605530:CDS |
| CCTTCGTCACAAGTCCGAAA+TGG | 0.488100 | 4_2:+51464337 | Msa0605530:CDS |
| CCCGCATATTTGTTCTGCTA+AGG | 0.488720 | 4_2:+51465609 | Msa0605530:CDS |
| TTCACCACCTTCTCCGGCGA+TGG | 0.492908 | 4_2:+51461383 | Msa0605530:exon |
| TGTGTAAAGAATTGCAACTT+TGG | 0.498076 | 4_2:+51468411 | Msa0605530:three_prime_UTR |
| GGTGGTGAATCTGTGAGATC+TGG | 0.498374 | 4_2:-51461369 | None:intergenic |
| ATCCCTGATGCTAAGGAAAG+TGG | 0.499662 | 4_2:+51465181 | Msa0605530:CDS |
| TCTGCTTCAGTAAGCTCCAC+AGG | 0.503537 | 4_2:-51466309 | None:intergenic |
| AATACCTCTCAATTTGGGTA+AGG | 0.504377 | 4_2:-51462959 | None:intergenic |
| GATGCGAGGGACTTCCTCTT+CGG | 0.505539 | 4_2:+51465849 | Msa0605530:CDS |
| ATCTCGAGATTGGAAAAGCT+TGG | 0.506597 | 4_2:-51462642 | None:intergenic |
| AATTTACACTGGTTCGTTCA+GGG | 0.506795 | 4_2:+51468714 | Msa0605530:three_prime_UTR |
| CTTGATCCGTTACACAAGTC+AGG | 0.507330 | 4_2:+51464168 | Msa0605530:CDS |
| GACCAGGTTGACCCAACCTC+TGG | 0.507760 | 4_2:+51466865 | Msa0605530:intron |
| TGAAGTTTAGAATTGAAGAA+AGG | 0.508327 | 4_2:-51461301 | None:intergenic |
| AAAGAATTGCAACTTTGGCT+TGG | 0.508966 | 4_2:+51468416 | Msa0605530:three_prime_UTR |
| GGCAGATTACATATTGAAAG+TGG | 0.509324 | 4_2:+51466948 | Msa0605530:CDS |
| GTCACACACATGCTTATTGT+CGG | 0.512785 | 4_2:+51468160 | Msa0605530:CDS |
| GATGACAGTATTTACAGCTT+CGG | 0.513779 | 4_2:-51467061 | None:intergenic |
| TCATATGAATCCACAGTGGA+TGG | 0.514753 | 4_2:-51466121 | None:intergenic |
| AACCGCTTGCCACAATCTCA+TGG | 0.515317 | 4_2:-51468301 | None:intergenic |
| AGTAACATTCTTAGGGAAGA+AGG | 0.515461 | 4_2:+51465103 | Msa0605530:CDS |
| GGCTGAGCCATCGCCGGAGA+AGG | 0.515540 | 4_2:-51461390 | None:intergenic |
| TGACATTAATTTGGTGCCCA+AGG | 0.517478 | 4_2:+51466015 | Msa0605530:CDS |
| ATATGAATCCACAGTGGATG+GGG | 0.517753 | 4_2:-51466119 | None:intergenic |
| GTCTGCCCAGGTGAATCATA+AGG | 0.518091 | 4_2:-51466586 | None:intergenic |
| AGATCTTGGGTTAAGGAGAA+TGG | 0.521392 | 4_2:+51462661 | Msa0605530:CDS |
| ATATACCGAATATATTTGCT+GGG | 0.521845 | 4_2:-51465390 | None:intergenic |
| TTACCAGTCCTCAGCACCTG+TGG | 0.522599 | 4_2:+51466293 | Msa0605530:intron |
| TCTCGAGAATGCAACTGTTA+GGG | 0.522696 | 4_2:+51465428 | Msa0605530:CDS |
| ACACTTTATCTTAACACACT+TGG | 0.523186 | 4_2:+51465804 | Msa0605530:CDS |
| ATGAATTACCTTCGTCGTCA+CGG | 0.523225 | 4_2:-51461434 | None:intergenic |
| ATACTGGCTTGGAAGAACTT+AGG | 0.525861 | 4_2:-51464448 | None:intergenic |
| GGTTTGGGTGCTCCTCCTAG+TGG | 0.528947 | 4_2:+51466094 | Msa0605530:CDS |
| AGGTCGTCCCACCTAATTCA+AGG | 0.529115 | 4_2:+51468138 | Msa0605530:CDS |
| CTTCCCTAAGAATGTTACTC+AGG | 0.529688 | 4_2:-51465099 | None:intergenic |
| TCTCTTCCTTATGATTCACC+TGG | 0.529952 | 4_2:+51466580 | Msa0605530:CDS |
| CCTTAGCAGAACAAATATGC+GGG | 0.530435 | 4_2:-51465609 | None:intergenic |
| GGGGCTTTCTTCTCGGCAAG+AGG | 0.532512 | 4_2:-51466052 | None:intergenic |
| CATATGAATCCACAGTGGAT+GGG | 0.533554 | 4_2:-51466120 | None:intergenic |
| TAGAGATATCCCTGATGCTA+AGG | 0.533771 | 4_2:+51465174 | Msa0605530:CDS |
| TACGGTCTTGGCCCAAGGGA+AGG | 0.536329 | 4_2:+51467033 | Msa0605530:CDS |
| TTGCAGTTAGTGACGGCCAT+TGG | 0.536634 | 4_2:-51464739 | None:intergenic |
| AATTTATCACCTGTGTCGAC+AGG | 0.539284 | 4_2:-51465249 | None:intergenic |
| TGCTGTCCGCACCTTGAACA+AGG | 0.541322 | 4_2:+51464481 | Msa0605530:CDS |
| TGGTCTCCAGATTGACGAGC+GGG | 0.541433 | 4_2:-51465884 | None:intergenic |
| AGTTAAACAGCCACATAGCT+AGG | 0.542194 | 4_2:+51468386 | Msa0605530:three_prime_UTR |
| GCAAGTGCGGCCCTAGTTAG+TGG | 0.543102 | 4_2:+51463017 | Msa0605530:CDS |
| AGCAAATCTCAATACTGGCT+TGG | 0.543208 | 4_2:-51464459 | None:intergenic |
| TCCCTGATGCTAAGGAAAGT+GGG | 0.543834 | 4_2:+51465182 | Msa0605530:CDS |
| CAGGAAATATTACACAATCA+GGG | 0.544297 | 4_2:+51464282 | Msa0605530:CDS |
| GTAGATGAATACCACTAACT+AGG | 0.544395 | 4_2:-51463028 | None:intergenic |
| TCTTGGCATGCAACCTTGTG+AGG | 0.544482 | 4_2:+51467089 | Msa0605530:CDS |
| TTATTGTCGGGTGTATACAT+AGG | 0.544529 | 4_2:+51468173 | Msa0605530:CDS |
| CATCCACTCGTTCAGAATCA+GGG | 0.547058 | 4_2:-51467008 | None:intergenic |
| TGTATTTGGGAAATTTACAC+TGG | 0.547552 | 4_2:+51468703 | Msa0605530:three_prime_UTR |
| TCTGGCGAGGCTGAAGATGA+TGG | 0.547600 | 4_2:+51466883 | Msa0605530:CDS |
| ATCAAGAGACATTGGGCCAA+AGG | 0.551616 | 4_2:-51464151 | None:intergenic |
| CGTTGAAGATGAATACCAGC+TGG | 0.552341 | 4_2:+51466906 | Msa0605530:CDS |
| TAGTGGTATTCATCTACTCC+AGG | 0.552999 | 4_2:+51463034 | Msa0605530:CDS |
| CCTCTCAATTTGGGTAAGGA+GGG | 0.553566 | 4_2:-51462955 | None:intergenic |
| TCTGAACGAGTGGATGAATA+CGG | 0.554007 | 4_2:+51467015 | Msa0605530:CDS |
| TCTTCAATTCTAAACTTCAG+TGG | 0.554514 | 4_2:+51461305 | Msa0605530:five_prime_UTR |
| TCACACACATGCTTATTGTC+GGG | 0.555717 | 4_2:+51468161 | Msa0605530:CDS |
| ATGAATACGGTCTTGGCCCA+AGG | 0.555779 | 4_2:+51467028 | Msa0605530:CDS |
| TGTCTAATTTCAGGAACGCA+TGG | 0.557299 | 4_2:+51466974 | Msa0605530:CDS |
| TCTTGTACAATTTCACGCGC+TGG | 0.557651 | 4_2:+51463209 | Msa0605530:CDS |
| GCAGATTACATATTGAAAGT+GGG | 0.557921 | 4_2:+51466949 | Msa0605530:CDS |
| GTGCTTTGTCGGATCACGGA+TGG | 0.561141 | 4_2:+51462930 | Msa0605530:CDS |
| ATGATCCACAACTAGATGCT+AGG | 0.562098 | 4_2:+51462144 | Msa0605530:CDS |
| AGATGCTAGGAGATGTTCAC+AGG | 0.562547 | 4_2:+51462157 | Msa0605530:CDS |
| TGTAACGGATCAAGAGACAT+TGG | 0.563004 | 4_2:-51464159 | None:intergenic |
| GTAACGGATCAAGAGACATT+GGG | 0.565503 | 4_2:-51464158 | None:intergenic |
| ATACCCAGAAGTATCATGTC+GGG | 0.565789 | 4_2:+51468493 | Msa0605530:three_prime_UTR |
| TTTACACACACCTAGCTATG+TGG | 0.566281 | 4_2:-51468396 | None:intergenic |
| ATCATAAGGAAGAGATCTGA+GGG | 0.568747 | 4_2:-51466572 | None:intergenic |
| AACTGGTTACCAGCTTGACA+AGG | 0.570909 | 4_2:+51464113 | Msa0605530:CDS |
| TTTATAACCTCGTCTGCAGA+GGG | 0.571108 | 4_2:-51462710 | None:intergenic |
| ACTTCTGGGTATTGTTGCTG+AGG | 0.572128 | 4_2:-51468482 | None:intergenic |
| TGAGCCATCGCCGGAGAAGG+TGG | 0.574105 | 4_2:-51461387 | None:intergenic |
| CGTCACGAGCTCTCTCATGA+AGG | 0.576960 | 4_2:+51462863 | Msa0605530:CDS |
| TATAACCTCGTCTGCAGAGG+GGG | 0.576990 | 4_2:-51462708 | None:intergenic |
| CATCATTGGCTTACCTCACA+AGG | 0.578882 | 4_2:-51467102 | None:intergenic |
| CAGGAACGCATGGGAAAGCA+TGG | 0.579106 | 4_2:+51466984 | Msa0605530:CDS |
| AACGCCACAAAAGTCTGCCC+AGG | 0.583006 | 4_2:-51466598 | None:intergenic |
| TAGATGAATACCACTAACTA+GGG | 0.583080 | 4_2:-51463027 | None:intergenic |
| GAATCCAGTTGTTGCAAGTG+CGG | 0.583487 | 4_2:+51463004 | Msa0605530:CDS |
| AAGAGTAGTAATAGCAAGTG+TGG | 0.586121 | 4_2:-51464806 | None:intergenic |
| TGAATACGGTCTTGGCCCAA+GGG | 0.587422 | 4_2:+51467029 | Msa0605530:CDS |
| ATCAATGTTGCAGTTAGTGA+CGG | 0.589023 | 4_2:-51464746 | None:intergenic |
| GGATATCAAGTGAGCCGAAG+AGG | 0.589509 | 4_2:-51465863 | None:intergenic |
| TCATCGTCTTTCTTGATAAG+CGG | 0.590697 | 4_2:-51461411 | None:intergenic |
| GTGTGTGACCTTGAATTAGG+TGG | 0.595130 | 4_2:-51468146 | None:intergenic |
| ATTTATAACCTCGTCTGCAG+AGG | 0.595326 | 4_2:-51462711 | None:intergenic |
| CAGATTACATATTGAAAGTG+GGG | 0.600224 | 4_2:+51466950 | Msa0605530:CDS |
| CATCTCCTAGCATCTAGTTG+TGG | 0.601531 | 4_2:-51462149 | None:intergenic |
| GTCTAATTTCAGGAACGCAT+GGG | 0.602050 | 4_2:+51466975 | Msa0605530:CDS |
| GACGATGACCGTGACGACGA+AGG | 0.602361 | 4_2:+51461426 | Msa0605530:CDS |
| TGAGATTGATAAAGATGCGA+GGG | 0.603374 | 4_2:+51465836 | Msa0605530:CDS |
| ACCCACTTTCCTTAGCATCA+GGG | 0.604088 | 4_2:-51465183 | None:intergenic |
| CTTCAGTGGTGCACTTACAA+AGG | 0.604901 | 4_2:+51461319 | Msa0605530:five_prime_UTR |
| TGTGGCGTTTGAGAAGCCTG+AGG | 0.604943 | 4_2:+51466612 | Msa0605530:CDS |
| ATGTCAAAAGCCTCTTCCGA+AGG | 0.609072 | 4_2:-51465998 | None:intergenic |
| AGTAAGCTCCACAGGTGCTG+AGG | 0.610022 | 4_2:-51466301 | None:intergenic |
| GTGGCGTTTGAGAAGCCTGA+GGG | 0.610662 | 4_2:+51466613 | Msa0605530:CDS |
| CCACTGTGGATTCATATGAA+AGG | 0.612693 | 4_2:+51466125 | Msa0605530:CDS |
| AACACACCTGACTTGTGTAA+CGG | 0.614135 | 4_2:-51464174 | None:intergenic |
| ATCATCTTCAGCCTCGCCAG+AGG | 0.614172 | 4_2:-51466881 | None:intergenic |
| ATAAGCGGCTGAGCCATCGC+CGG | 0.614224 | 4_2:-51461396 | None:intergenic |
| GATCCGACAAAGCACACGAA+TGG | 0.616477 | 4_2:-51462922 | None:intergenic |
| CTCTTCCTTATGATTCACCT+GGG | 0.617576 | 4_2:+51466581 | Msa0605530:CDS |
| CATTAATTTGGTGCCCAAGG+AGG | 0.617595 | 4_2:+51466018 | Msa0605530:CDS |
| GCTTGCCACAATCTCATGGA+TGG | 0.618369 | 4_2:-51468297 | None:intergenic |
| TGACAAGAAGTATGCAGTGA+GGG | 0.618939 | 4_2:-51468457 | None:intergenic |
| CCATTTCGGACTTGTGACGA+AGG | 0.619323 | 4_2:-51464337 | None:intergenic |
| CTTGCCGAGAAGAAAGCCCC+TGG | 0.619544 | 4_2:+51466055 | Msa0605530:CDS |
| ATACCAGCTGGAGGATCTAG+AGG | 0.621534 | 4_2:+51466918 | Msa0605530:CDS |
| GACAGGAAATGAATCAAGCG+TGG | 0.621967 | 4_2:+51464834 | Msa0605530:CDS |
| AACAGAAAAGAAAACTTCTG+TGG | 0.622899 | 4_2:-51462618 | None:intergenic |
| GGTTGACCCAACCTCTGGCG+AGG | 0.622975 | 4_2:+51466870 | Msa0605530:intron |
| AGGAAATATTACACAATCAG+GGG | 0.624728 | 4_2:+51464283 | Msa0605530:CDS |
| CAACCTCTAGATCCTCCAGC+TGG | 0.624747 | 4_2:-51466921 | None:intergenic |
| ATCCATGAGATTGTGGCAAG+CGG | 0.630120 | 4_2:+51468299 | Msa0605530:CDS |
| TGATGCCATCCATGAGATTG+TGG | 0.630840 | 4_2:+51468292 | Msa0605530:CDS |
| AACATTCTTAGGGAAGAAGG+TGG | 0.632595 | 4_2:+51465106 | Msa0605530:CDS |
| AATCATAAGGAAGAGATCTG+AGG | 0.638595 | 4_2:-51466573 | None:intergenic |
| GGAGGATCTAGAGGTTGTTG+CGG | 0.641056 | 4_2:+51466927 | Msa0605530:CDS |
| CTTTCAAGAAAATCATAGAA+GGG | 0.642452 | 4_2:-51464311 | None:intergenic |
| CCCTCCTTACCCAAATTGAG+AGG | 0.643975 | 4_2:+51462955 | Msa0605530:CDS |
| GCCTTAGCAGAACAAATATG+CGG | 0.646975 | 4_2:-51465610 | None:intergenic |
| AAGTGTGTTAAGATAAAGTG+TGG | 0.647393 | 4_2:-51465802 | None:intergenic |
| AATCTTCAATGAACTCACAA+AGG | 0.647450 | 4_2:-51465213 | None:intergenic |
| CTGAGATTGATAAAGATGCG+AGG | 0.648808 | 4_2:+51465835 | Msa0605530:CDS |
| GGAGCACCCAAACCACCAGT+TGG | 0.649439 | 4_2:-51466085 | None:intergenic |
| ACTGGTTACCAGCTTGACAA+GGG | 0.650734 | 4_2:+51464114 | Msa0605530:CDS |
| AATACCCAGAAGTATCATGT+CGG | 0.650762 | 4_2:+51468492 | Msa0605530:three_prime_UTR |
| TTGTCGGGTGTATACATAGG+GGG | 0.654756 | 4_2:+51468176 | Msa0605530:CDS |
| GGTGGCAATGACACATCCAA+TGG | 0.659109 | 4_2:+51464723 | Msa0605530:intron |
| GGACCCTGATTCTGAACGAG+TGG | 0.660047 | 4_2:+51467005 | Msa0605530:CDS |
| TGTCAACCTTGTTCAAGGTG+CGG | 0.660820 | 4_2:-51464487 | None:intergenic |
| CTGGTTACCAGCTTGACAAG+GGG | 0.662402 | 4_2:+51464115 | Msa0605530:CDS |
| TATGAATCCACAGTGGATGG+GGG | 0.670381 | 4_2:-51466118 | None:intergenic |
| TGTGTGACCTTGAATTAGGT+GGG | 0.672239 | 4_2:-51468145 | None:intergenic |
| ATTCACTTACCTGTCGACAC+AGG | 0.673693 | 4_2:+51465240 | Msa0605530:CDS |
| GGGGTGTGAAGGTACTTGTG+CGG | 0.674790 | 4_2:+51468195 | Msa0605530:CDS |
| AGATTACATATTGAAAGTGG+GGG | 0.675495 | 4_2:+51466951 | Msa0605530:CDS |
| TGAAGATGAATACCAGCTGG+AGG | 0.678607 | 4_2:+51466909 | Msa0605530:CDS |
| CTTAGCAGAACAAATATGCG+GGG | 0.682439 | 4_2:-51465608 | None:intergenic |
| CAAGATATGTTGACTCAATG+CGG | 0.692650 | 4_2:+51468338 | Msa0605530:three_prime_UTR |
| TATACCGAATATATTTGCTG+GGG | 0.697705 | 4_2:-51465389 | None:intergenic |
| CTGGTCTCCAGATTGACGAG+CGG | 0.703175 | 4_2:-51465885 | None:intergenic |
| ATTGTCGGGTGTATACATAG+GGG | 0.715775 | 4_2:+51468175 | Msa0605530:CDS |
| CCTTTCATATGAATCCACAG+TGG | 0.729978 | 4_2:-51466125 | None:intergenic |
| CTGACAAGAAGTATGCAGTG+AGG | 0.736360 | 4_2:-51468458 | None:intergenic |
| TCACTACTTGCAGGGCACAG+AGG | 0.740479 | 4_2:+51468118 | Msa0605530:intron |
| TTATAACCTCGTCTGCAGAG+GGG | 0.747009 | 4_2:-51462709 | None:intergenic |
| TCATAAGGAAGAGATCTGAG+GGG | 0.799654 | 4_2:-51466571 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTGTTTATTTATCTA+TGG | + | chr4_2:51462192-51462211 | Msa0605530:intron | 10.0% |
| !! | ATCTTTAATTAAGAAATAAA+AGG | - | chr4_2:51462500-51462519 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAAATAAAAGAGA+TGG | - | chr4_2:51462834-51462853 | None:intergenic | 10.0% |
| !!! | ATCTCTTTTATTTTTTTAAA+AGG | + | chr4_2:51462833-51462852 | Msa0605530:intron | 10.0% |
| !! | TATATATTAATAATAATACC+TGG | - | chr4_2:51463055-51463074 | None:intergenic | 10.0% |
| !!! | TTAAATTTTTATTTGGAAAA+TGG | - | chr4_2:51463552-51463571 | None:intergenic | 10.0% |
| !! | TCCAAATAAAAATTTAAATT+CGG | + | chr4_2:51463555-51463574 | Msa0605530:intron | 10.0% |
| !!! | TAATATTAAAAGATTTTTCA+CGG | + | chr4_2:51464644-51464663 | Msa0605530:intron | 10.0% |
| !!! | TATATTTTAATACACAAAGA+AGG | - | chr4_2:51463279-51463298 | None:intergenic | 15.0% |
| !!! | ACCGAATTTAAATTTTTATT+TGG | - | chr4_2:51463559-51463578 | None:intergenic | 15.0% |
| !! | AATTTAATAGAATTTGAGAA+AGG | + | chr4_2:51464525-51464544 | Msa0605530:intron | 15.0% |
| !! | TTATTAATAATTTATGAGTG+TGG | + | chr4_2:51464686-51464705 | Msa0605530:intron | 15.0% |
| !!! | TCTATTATGTTATTATTTTC+AGG | + | chr4_2:51465068-51465087 | Msa0605530:intron | 15.0% |
| !!! | TCTAGAATTTTTGTTTATTT+AGG | + | chr4_2:51465535-51465554 | Msa0605530:intron | 15.0% |
| !!! | CTAGAATTTTTGTTTATTTA+GGG | + | chr4_2:51465536-51465555 | Msa0605530:intron | 15.0% |
| !!! | ATCAACTTCAAAATTTTAAA+AGG | - | chr4_2:51467440-51467459 | None:intergenic | 15.0% |
| !! | ATTAAGTATAATTATGACTA+TGG | - | chr4_2:51468536-51468555 | None:intergenic | 15.0% |
| !! | TAGAAACATAAATTAAGCAT+TGG | - | chr4_2:51461530-51461549 | None:intergenic | 20.0% |
| !!! | CTTAATTTATGTTTCTATTG+AGG | + | chr4_2:51461533-51461552 | Msa0605530:intron | 20.0% |
| !! | TTGAATTTATCACAAGTTTA+TGG | + | chr4_2:51461908-51461927 | Msa0605530:intron | 20.0% |
| !! | AAAGAATTAATCCACAAATA+CGG | - | chr4_2:51462043-51462062 | None:intergenic | 20.0% |
| !! | AAAGATTGTATCTTACTTAT+AGG | + | chr4_2:51462514-51462533 | Msa0605530:intron | 20.0% |
| !! | AAGAAAAGAATTACTGAAAA+AGG | - | chr4_2:51462577-51462596 | None:intergenic | 20.0% |
| !!! | AATATCTAACAGGTTTTAAA+AGG | - | chr4_2:51463461-51463480 | None:intergenic | 20.0% |
| !!! | AATTTTTATTTGGAAAATGG+AGG | - | chr4_2:51463549-51463568 | None:intergenic | 20.0% |
| !! | TAAAAATTTAAATTCGGTAC+AGG | + | chr4_2:51463561-51463580 | Msa0605530:intron | 20.0% |
| !! | AAAAATTTAAATTCGGTACA+GGG | + | chr4_2:51463562-51463581 | Msa0605530:intron | 20.0% |
| !!! | GCTTAAGCTTTTTTAATAAT+TGG | + | chr4_2:51463616-51463635 | Msa0605530:intron | 20.0% |
| !!! | CTTGTTGATATTTGATTTTT+TGG | + | chr4_2:51463728-51463747 | Msa0605530:intron | 20.0% |
| !! | ATGAATGTAACTTATTTGTT+TGG | - | chr4_2:51464028-51464047 | None:intergenic | 20.0% |
| !! | TTGCATTTCTATAATTTATG+TGG | + | chr4_2:51465682-51465701 | Msa0605530:intron | 20.0% |
| !!! | TGCTTTGATTTATATTTTGA+TGG | + | chr4_2:51465743-51465762 | Msa0605530:intron | 20.0% |
| !!! | TTCTTTTCATTAGTTACTTT+AGG | + | chr4_2:51465942-51465961 | Msa0605530:intron | 20.0% |
| !! | CATGATCAGTTTAATAAAAT+GGG | - | chr4_2:51467164-51467183 | None:intergenic | 20.0% |
| !! | TCATGATCAGTTTAATAAAA+TGG | - | chr4_2:51467165-51467184 | None:intergenic | 20.0% |
| !!! | GTAACATTTTTTTAGTTTTC+TGG | - | chr4_2:51467251-51467270 | None:intergenic | 20.0% |
| !! | ACTAAAAAAATGTTACTATC+AGG | + | chr4_2:51467255-51467274 | Msa0605530:intron | 20.0% |
| !!! | AAATTTTAAAAGGAACTAAG+CGG | - | chr4_2:51467430-51467449 | None:intergenic | 20.0% |
| !! | AATCACCAAAATACAAATTT+AGG | - | chr4_2:51468364-51468383 | None:intergenic | 20.0% |
| !!! | TAAATTTGTATTTTGGTGAT+TGG | + | chr4_2:51468363-51468382 | Msa0605530:three_prime_UTR | 20.0% |
| !! | CATTGAGAAAACAAATATTA+TGG | - | chr4_2:51468597-51468616 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTCTCAATGAAT+TGG | + | chr4_2:51468600-51468619 | Msa0605530:three_prime_UTR | 20.0% |
| !! | CAGAATTATATCTTGTATTT+GGG | + | chr4_2:51468657-51468676 | Msa0605530:three_prime_UTR | 20.0% |
| !! | TGAAGTTTAGAATTGAAGAA+AGG | - | chr4_2:51461304-51461323 | None:intergenic | 25.0% |
| !!! | ATTATGCAGTGTTTTTGTAT+AGG | - | chr4_2:51461347-51461366 | None:intergenic | 25.0% |
| !!! | GTTCGTTTTTTAATTGTTGT+CGG | + | chr4_2:51461610-51461629 | Msa0605530:intron | 25.0% |
| !! | TATAGCTTCTTTTCAAACTT+CGG | + | chr4_2:51461968-51461987 | Msa0605530:intron | 25.0% |
| ! | TACGGACATTATAAGTATAT+AGG | - | chr4_2:51462025-51462044 | None:intergenic | 25.0% |
| ! | ACAGTAAAAAATCAAACTAC+TGG | - | chr4_2:51462393-51462412 | None:intergenic | 25.0% |
| ! | ATAGTAAGACTGATATGTAT+AGG | + | chr4_2:51462892-51462911 | Msa0605530:CDS | 25.0% |
| ! | TAGTAAGACTGATATGTATA+GGG | + | chr4_2:51462893-51462912 | Msa0605530:CDS | 25.0% |
| ! | TTTCAAATACCTCTCAATTT+GGG | - | chr4_2:51462967-51462986 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTCGATTTAGCA+CGG | + | chr4_2:51463389-51463408 | Msa0605530:intron | 25.0% |
| ! | TGTAATTCTGAATATCTAAC+AGG | - | chr4_2:51463471-51463490 | None:intergenic | 25.0% |
| ! | AAAATTTAAATTCGGTACAG+GGG | + | chr4_2:51463563-51463582 | Msa0605530:intron | 25.0% |
| !! | AGTTTTGCTTTCTTTTATTG+TGG | - | chr4_2:51463707-51463726 | None:intergenic | 25.0% |
| !! | GCTAAAATAAGAGTATGAAT+AGG | - | chr4_2:51463820-51463839 | None:intergenic | 25.0% |
| !! | TATATCAATGTGTCATTGAT+AGG | - | chr4_2:51463976-51463995 | None:intergenic | 25.0% |
| !! | CATTCATATTTGTTGAAACA+TGG | + | chr4_2:51464041-51464060 | Msa0605530:intron | 25.0% |
| ! | CTTTCAAGAAAATCATAGAA+GGG | - | chr4_2:51464314-51464333 | None:intergenic | 25.0% |
| ! | ACTTTCAAGAAAATCATAGA+AGG | - | chr4_2:51464315-51464334 | None:intergenic | 25.0% |
| ! | AATTTGTAATCTGCTTCATA+AGG | - | chr4_2:51464864-51464883 | None:intergenic | 25.0% |
| !!! | CACAGAGATCTATATTTTAA+AGG | - | chr4_2:51464958-51464977 | None:intergenic | 25.0% |
| !! | TTGAATATTTTCCCTGATAA+TGG | + | chr4_2:51465030-51465049 | Msa0605530:intron | 25.0% |
| ! | AGTAATTTAGACCATTATCA+GGG | - | chr4_2:51465044-51465063 | None:intergenic | 25.0% |
| ! | ATATACCGAATATATTTGCT+GGG | - | chr4_2:51465393-51465412 | None:intergenic | 25.0% |
| ! | AATATACCGAATATATTTGC+TGG | - | chr4_2:51465394-51465413 | None:intergenic | 25.0% |
| !!! | TATGATTTTGATTTCTTTGC+AGG | + | chr4_2:51465767-51465786 | Msa0605530:intron | 25.0% |
| !!! | ACTTACGTATTTTTTCAAAC+TGG | - | chr4_2:51465907-51465926 | None:intergenic | 25.0% |
| ! | CGGATATAGAAAGAATAATA+CGG | - | chr4_2:51466234-51466253 | None:intergenic | 25.0% |
| !! | TCTGAGATTTATTGTTAAAG+AGG | + | chr4_2:51466666-51466685 | Msa0605530:CDS | 25.0% |
| !! | ACATAATATAATGGAGATCT+TGG | - | chr4_2:51466723-51466742 | None:intergenic | 25.0% |
| !! | TAGACCTATAATAGTTTTTG+TGG | + | chr4_2:51466810-51466829 | Msa0605530:intron | 25.0% |
| ! | CTTTCCACAAAAACTATTAT+AGG | - | chr4_2:51466817-51466836 | None:intergenic | 25.0% |
| !! | TTTCTGGAAAGAATCTAATT+GGG | - | chr4_2:51467235-51467254 | None:intergenic | 25.0% |
| !!! | TTTTCTGGAAAGAATCTAAT+TGG | - | chr4_2:51467236-51467255 | None:intergenic | 25.0% |
| !! | CTTTCTCATACATCAATTTT+AGG | + | chr4_2:51467354-51467373 | Msa0605530:intron | 25.0% |
| ! | AAAGTTTAAATGCTACTCAT+GGG | - | chr4_2:51467498-51467517 | None:intergenic | 25.0% |
| ! | TAAAGTTTAAATGCTACTCA+TGG | - | chr4_2:51467499-51467518 | None:intergenic | 25.0% |
| ! | TATCAAAACTCTCAACAATT+GGG | - | chr4_2:51467661-51467680 | None:intergenic | 25.0% |
| ! | ATATCAAAACTCTCAACAAT+TGG | - | chr4_2:51467662-51467681 | None:intergenic | 25.0% |
| ! | AAAGAGATGCAAATACATTT+AGG | + | chr4_2:51467690-51467709 | Msa0605530:intron | 25.0% |
| !! | AGTAGTTCCTTTTAATGATT+TGG | + | chr4_2:51467738-51467757 | Msa0605530:intron | 25.0% |
| ! | TCTAATGCCAAATCATTAAA+AGG | - | chr4_2:51467748-51467767 | None:intergenic | 25.0% |
| ! | AACCTAAGAAACTCTTAAAT+CGG | - | chr4_2:51467855-51467874 | None:intergenic | 25.0% |
| ! | AACAAAATGTCTAATATTCC+AGG | - | chr4_2:51467963-51467982 | None:intergenic | 25.0% |
| ! | CCAAATACAAGATATAATTC+TGG | - | chr4_2:51468659-51468678 | None:intergenic | 25.0% |
| ! | CCAGAATTATATCTTGTATT+TGG | + | chr4_2:51468656-51468675 | Msa0605530:three_prime_UTR | 25.0% |
| ! | TACGTACTTAATTGTGTATT+TGG | + | chr4_2:51468689-51468708 | Msa0605530:three_prime_UTR | 25.0% |
| ! | ACGTACTTAATTGTGTATTT+GGG | + | chr4_2:51468690-51468709 | Msa0605530:three_prime_UTR | 25.0% |
| TCTTCAATTCTAAACTTCAG+TGG | + | chr4_2:51461305-51461324 | Msa0605530:five_prime_UTR | 30.0% | |
| AAGAGAAAAACGGAAAAAGT+GGG | - | chr4_2:51461464-51461483 | None:intergenic | 30.0% | |
| AAAGAGAAAAACGGAAAAAG+TGG | - | chr4_2:51461465-51461484 | None:intergenic | 30.0% | |
| !! | CATAAATTAAGCATTGGATC+TGG | - | chr4_2:51461524-51461543 | None:intergenic | 30.0% |
| ! | TATGTTTCTATTGAGGAATG+CGG | + | chr4_2:51461540-51461559 | Msa0605530:intron | 30.0% |
| ! | TATAGCTTCTTTTCACACTT+TGG | + | chr4_2:51461755-51461774 | Msa0605530:intron | 30.0% |
| ACTTATAATGTCCGTATTTG+TGG | + | chr4_2:51462029-51462048 | Msa0605530:intron | 30.0% | |
| ! | AGATAATTATTCCCCGTTTT+TGG | + | chr4_2:51462079-51462098 | Msa0605530:intron | 30.0% |
| !! | GATAATTATTCCCCGTTTTT+GGG | + | chr4_2:51462080-51462099 | Msa0605530:intron | 30.0% |
| ACGTAATCAATCACATGTAT+CGG | + | chr4_2:51462297-51462316 | Msa0605530:intron | 30.0% | |
| !! | ATAACAGTTTTGTGATAACC+TGG | - | chr4_2:51462432-51462451 | None:intergenic | 30.0% |
| ! | CTTTTCTTGCCTCATTTTAT+AGG | + | chr4_2:51462589-51462608 | Msa0605530:intron | 30.0% |
| AACAGAAAAGAAAACTTCTG+TGG | - | chr4_2:51462621-51462640 | None:intergenic | 30.0% | |
| AATGGTGTACCTGATAATAA+AGG | + | chr4_2:51462679-51462698 | Msa0605530:CDS | 30.0% | |
| ACTTGTCAGATTCACTTAAA+CGG | + | chr4_2:51462777-51462796 | Msa0605530:intron | 30.0% | |
| GTTTCAAATACCTCTCAATT+TGG | - | chr4_2:51462968-51462987 | None:intergenic | 30.0% | |
| TAGATGAATACCACTAACTA+GGG | - | chr4_2:51463030-51463049 | None:intergenic | 30.0% | |
| GTATATTTCATCTACATCAG+CGG | + | chr4_2:51463096-51463115 | Msa0605530:intron | 30.0% | |
| CAAATCCTGAGATTGTAAAA+AGG | + | chr4_2:51463145-51463164 | Msa0605530:CDS | 30.0% | |
| AATGTAATTCATCAGTTCCT+GGG | + | chr4_2:51463337-51463356 | Msa0605530:intron | 30.0% | |
| ATTGAATATTTGACATGAGC+TGG | + | chr4_2:51463421-51463440 | Msa0605530:intron | 30.0% | |
| ! | ATTGAAGCTTTATGATCAAG+TGG | + | chr4_2:51463495-51463514 | Msa0605530:intron | 30.0% |
| AAATTTAAATTCGGTACAGG+GGG | + | chr4_2:51463564-51463583 | Msa0605530:intron | 30.0% | |
| TTAAATATGAAGACCTTCAG+TGG | + | chr4_2:51463590-51463609 | Msa0605530:intron | 30.0% | |
| ! | ACTTTTCTATAAGCTTCTCA+TGG | + | chr4_2:51463670-51463689 | Msa0605530:intron | 30.0% |
| ATTCACAGTAGAATAGTAGA+TGG | - | chr4_2:51463780-51463799 | None:intergenic | 30.0% | |
| AATAAAGAAGGATTCTTGGA+CGG | - | chr4_2:51463999-51464018 | None:intergenic | 30.0% | |
| AGGGACAACTATATAAGAAA+AGG | - | chr4_2:51464202-51464221 | None:intergenic | 30.0% | |
| ! | TTTTCTTATATAGTTGTCCC+TGG | + | chr4_2:51464201-51464220 | Msa0605530:intron | 30.0% |
| TTTCTTATATAGTTGTCCCT+GGG | + | chr4_2:51464202-51464221 | Msa0605530:intron | 30.0% | |
| TTATGTACCATAATATCTGC+AGG | + | chr4_2:51464247-51464266 | Msa0605530:intron | 30.0% | |
| TCAGGAAATATTACACAATC+AGG | + | chr4_2:51464281-51464300 | Msa0605530:CDS | 30.0% | |
| CAGGAAATATTACACAATCA+GGG | + | chr4_2:51464282-51464301 | Msa0605530:CDS | 30.0% | |
| AGGAAATATTACACAATCAG+GGG | + | chr4_2:51464283-51464302 | Msa0605530:CDS | 30.0% | |
| AGCTTCAAAAATCACCATTT+CGG | - | chr4_2:51464354-51464373 | None:intergenic | 30.0% | |
| ! | TTTTCTGTCTGTTATGATGT+TGG | + | chr4_2:51464587-51464606 | Msa0605530:intron | 30.0% |
| TTTCTGTCTGTTATGATGTT+GGG | + | chr4_2:51464588-51464607 | Msa0605530:intron | 30.0% | |
| !! | ATTACTACTCTTTTGAAGAC+AGG | + | chr4_2:51464817-51464836 | Msa0605530:CDS | 30.0% |
| GCTGAAAGAAACATATAGAA+TGG | - | chr4_2:51464991-51465010 | None:intergenic | 30.0% | |
| CAAATGAAAGATGTAACATC+TGG | - | chr4_2:51465013-51465032 | None:intergenic | 30.0% | |
| CAGTAATTTAGACCATTATC+AGG | - | chr4_2:51465045-51465064 | None:intergenic | 30.0% | |
| !! | CTGATAATGGTCTAAATTAC+TGG | + | chr4_2:51465043-51465062 | Msa0605530:intron | 30.0% |
| ATTTCCTGAGTAACATTCTT+AGG | + | chr4_2:51465095-51465114 | Msa0605530:CDS | 30.0% | |
| TTTCCTGAGTAACATTCTTA+GGG | + | chr4_2:51465096-51465115 | Msa0605530:CDS | 30.0% | |
| AATCTTCAATGAACTCACAA+AGG | - | chr4_2:51465216-51465235 | None:intergenic | 30.0% | |
| TAGTTTACTTTGCGTGATAT+TGG | + | chr4_2:51465286-51465305 | Msa0605530:intron | 30.0% | |
| AAGGGGAAAAAATTAACAAG+AGG | - | chr4_2:51465319-51465338 | None:intergenic | 30.0% | |
| ! | TATACCGAATATATTTGCTG+GGG | - | chr4_2:51465392-51465411 | None:intergenic | 30.0% |
| TAAACTTCCTTGAAAATCGT+AGG | - | chr4_2:51465710-51465729 | None:intergenic | 30.0% | |
| AAGTGTGTTAAGATAAAGTG+TGG | - | chr4_2:51465805-51465824 | None:intergenic | 30.0% | |
| ACACTTTATCTTAACACACT+TGG | + | chr4_2:51465804-51465823 | Msa0605530:CDS | 30.0% | |
| ! | AGAGGCTTTTGACATTAATT+TGG | + | chr4_2:51466006-51466025 | Msa0605530:CDS | 30.0% |
| !! | AAACTTTGGGAAGCTTTTTA+AGG | + | chr4_2:51466174-51466193 | Msa0605530:CDS | 30.0% |
| TACATCTTCCAATAGTTGTT+CGG | - | chr4_2:51466415-51466434 | None:intergenic | 30.0% | |
| TCATACTATTATGCAACTTC+AGG | + | chr4_2:51466461-51466480 | Msa0605530:intron | 30.0% | |
| AGGGAAAAATATTACACAGA+TGG | - | chr4_2:51466487-51466506 | None:intergenic | 30.0% | |
| ! | GTAATATTTTTCCCTATTCC+AGG | + | chr4_2:51466492-51466511 | Msa0605530:intron | 30.0% |
| AACTACAATAACCTGGAATA+GGG | - | chr4_2:51466506-51466525 | None:intergenic | 30.0% | |
| TTAGAAAACTTTCCAGATGT+TGG | - | chr4_2:51466643-51466662 | None:intergenic | 30.0% | |
| CACACGCATACATAATATAA+TGG | - | chr4_2:51466732-51466751 | None:intergenic | 30.0% | |
| GCAGATTACATATTGAAAGT+GGG | + | chr4_2:51466949-51466968 | Msa0605530:CDS | 30.0% | |
| CAGATTACATATTGAAAGTG+GGG | + | chr4_2:51466950-51466969 | Msa0605530:CDS | 30.0% | |
| AGATTACATATTGAAAGTGG+GGG | + | chr4_2:51466951-51466970 | Msa0605530:CDS | 30.0% | |
| ATGAATACGAAATCAGTGTA+TGG | - | chr4_2:51467290-51467309 | None:intergenic | 30.0% | |
| ! | ATTCATTTTCCATGCCTTAT+TGG | + | chr4_2:51467304-51467323 | Msa0605530:intron | 30.0% |
| !! | TTAGGTTGAACATTATTCTG+AGG | + | chr4_2:51467372-51467391 | Msa0605530:intron | 30.0% |
| !! | AACTTTAAAGTGCTGTTGTT+TGG | + | chr4_2:51467512-51467531 | Msa0605530:intron | 30.0% |
| GTATTTGCATCTCTTTATGT+AGG | - | chr4_2:51467686-51467705 | None:intergenic | 30.0% | |
| ACCTAAGAAACTCTTAAATC+GGG | - | chr4_2:51467854-51467873 | None:intergenic | 30.0% | |
| ! | TTTTATTGTTCACTACTTGC+AGG | + | chr4_2:51468109-51468128 | Msa0605530:intron | 30.0% |
| TTTATTGTTCACTACTTGCA+GGG | + | chr4_2:51468110-51468129 | Msa0605530:intron | 30.0% | |
| ! | TCAACATATCTTGACTTGAA+TGG | - | chr4_2:51468331-51468350 | None:intergenic | 30.0% |
| TGTGTAAAGAATTGCAACTT+TGG | + | chr4_2:51468411-51468430 | Msa0605530:three_prime_UTR | 30.0% | |
| ! | TGTTTTCTCAATGAATTGGA+TGG | + | chr4_2:51468604-51468623 | Msa0605530:three_prime_UTR | 30.0% |
| TGTATTTGGGAAATTTACAC+TGG | + | chr4_2:51468703-51468722 | Msa0605530:three_prime_UTR | 30.0% | |
| TCATCGTCTTTCTTGATAAG+CGG | - | chr4_2:51461414-51461433 | None:intergenic | 35.0% | |
| AATTGCGCGAAAGAGAAAAA+CGG | - | chr4_2:51461474-51461493 | None:intergenic | 35.0% | |
| TCACGATGCTTGAATTGAAT+TGG | + | chr4_2:51461578-51461597 | Msa0605530:intron | 35.0% | |
| TTCAAAAAACGCACTAATCG+TGG | - | chr4_2:51461781-51461800 | None:intergenic | 35.0% | |
| ! | TGAAATGCAGTTCTTTTGTC+AGG | + | chr4_2:51461872-51461891 | Msa0605530:intron | 35.0% |
| ! | GTTTATGGTGACTAGTTAGT+TGG | + | chr4_2:51461923-51461942 | Msa0605530:intron | 35.0% |
| ! | CTTCTTTTCAAACTTCGGTT+AGG | + | chr4_2:51461973-51461992 | Msa0605530:intron | 35.0% |
| ! | CTTTTCAATTCCCAAAAACG+GGG | - | chr4_2:51462093-51462112 | None:intergenic | 35.0% |
| ! | CCTTTTCAATTCCCAAAAAC+GGG | - | chr4_2:51462094-51462113 | None:intergenic | 35.0% |
| ! | CCCTTTTCAATTCCCAAAAA+CGG | - | chr4_2:51462095-51462114 | None:intergenic | 35.0% |
| !! | CCGTTTTTGGGAATTGAAAA+GGG | + | chr4_2:51462092-51462111 | Msa0605530:CDS | 35.0% |
| !! | CGTTTTTGGGAATTGAAAAG+GGG | + | chr4_2:51462093-51462112 | Msa0605530:CDS | 35.0% |
| !! | GTTTTTGGGAATTGAAAAGG+GGG | + | chr4_2:51462094-51462113 | Msa0605530:CDS | 35.0% |
| TTGTGGATCATTAAAAACCC+GGG | - | chr4_2:51462135-51462154 | None:intergenic | 35.0% | |
| GTTGTGGATCATTAAAAACC+CGG | - | chr4_2:51462136-51462155 | None:intergenic | 35.0% | |
| ACTGTTATACCTACTGAATC+AGG | + | chr4_2:51462444-51462463 | Msa0605530:intron | 35.0% | |
| CTGTTATACCTACTGAATCA+GGG | + | chr4_2:51462445-51462464 | Msa0605530:intron | 35.0% | |
| TGGCTTCAACCTATAAAATG+AGG | - | chr4_2:51462601-51462620 | None:intergenic | 35.0% | |
| ! | TTTTCCAATCTCGAGATCTT+GGG | + | chr4_2:51462648-51462667 | Msa0605530:CDS | 35.0% |
| GGGAAAGTTCCTTTATTATC+AGG | - | chr4_2:51462691-51462710 | None:intergenic | 35.0% | |
| AATACCTCTCAATTTGGGTA+AGG | - | chr4_2:51462962-51462981 | None:intergenic | 35.0% | |
| GTAGATGAATACCACTAACT+AGG | - | chr4_2:51463031-51463050 | None:intergenic | 35.0% | |
| ATCCTGAGATTGTAAAAAGG+TGG | + | chr4_2:51463148-51463167 | Msa0605530:CDS | 35.0% | |
| CAATGTAATTCATCAGTTCC+TGG | + | chr4_2:51463336-51463355 | Msa0605530:intron | 35.0% | |
| TTGATCTTGATACATATCCC+AGG | - | chr4_2:51463357-51463376 | None:intergenic | 35.0% | |
| GATGGCATAATGTCATAAGA+TGG | - | chr4_2:51463762-51463781 | None:intergenic | 35.0% | |
| CATTGCTATGTTCTCAACTT+CGG | + | chr4_2:51463916-51463935 | Msa0605530:intron | 35.0% | |
| GTCCAAGAATCCTTCTTTAT+TGG | + | chr4_2:51463998-51464017 | Msa0605530:intron | 35.0% | |
| TGCCAATAAAGAAGGATTCT+TGG | - | chr4_2:51464003-51464022 | None:intergenic | 35.0% | |
| GTTTGGTATGCCAATAAAGA+AGG | - | chr4_2:51464011-51464030 | None:intergenic | 35.0% | |
| GAATTGCTACATTGCAGATA+CGG | + | chr4_2:51464065-51464084 | Msa0605530:intron | 35.0% | |
| CGAATAACCTGCAGATATTA+TGG | - | chr4_2:51464257-51464276 | None:intergenic | 35.0% | |
| AAGGCAATTACAGACCTTAA+TGG | + | chr4_2:51464377-51464396 | Msa0605530:CDS | 35.0% | |
| TGATTGCTGGAGTTAATTCT+CGG | - | chr4_2:51464412-51464431 | None:intergenic | 35.0% | |
| ATCAATGTTGCAGTTAGTGA+CGG | - | chr4_2:51464749-51464768 | None:intergenic | 35.0% | |
| CACTAACTGCAACATTGATA+TGG | + | chr4_2:51464750-51464769 | Msa0605530:CDS | 35.0% | |
| AAGAGTAGTAATAGCAAGTG+TGG | - | chr4_2:51464809-51464828 | None:intergenic | 35.0% | |
| AGTAACATTCTTAGGGAAGA+AGG | + | chr4_2:51465103-51465122 | Msa0605530:CDS | 35.0% | |
| ! | TCGACACAGGTGATAAATTT+TGG | + | chr4_2:51465253-51465272 | Msa0605530:intron | 35.0% |
| CATTGAAGGACCAAAAACAT+TGG | + | chr4_2:51465365-51465384 | Msa0605530:CDS | 35.0% | |
| !! | ATCAACAGAAGCACCAAATT+TGG | - | chr4_2:51465475-51465494 | None:intergenic | 35.0% |
| !! | AAATTTGGTGCTTCTGTTGA+TGG | + | chr4_2:51465474-51465493 | Msa0605530:CDS | 35.0% |
| !! | TGCTTCTGTTGATGGATTAA+AGG | + | chr4_2:51465482-51465501 | Msa0605530:CDS | 35.0% |
| CTTTATCTTAACACACTTGG+AGG | + | chr4_2:51465807-51465826 | Msa0605530:CDS | 35.0% | |
| TGAGATTGATAAAGATGCGA+GGG | + | chr4_2:51465836-51465855 | Msa0605530:CDS | 35.0% | |
| ATTCCTGAGTTTGCAAACTT+TGG | + | chr4_2:51466160-51466179 | Msa0605530:CDS | 35.0% | |
| TTCCTGAGTTTGCAAACTTT+GGG | + | chr4_2:51466161-51466180 | Msa0605530:CDS | 35.0% | |
| ACATCTTCCAATAGTTGTTC+GGG | - | chr4_2:51466414-51466433 | None:intergenic | 35.0% | |
| CAACTACAATAACCTGGAAT+AGG | - | chr4_2:51466507-51466526 | None:intergenic | 35.0% | |
| ATTCCAGGTTATTGTAGTTG+TGG | + | chr4_2:51466507-51466526 | Msa0605530:intron | 35.0% | |
| ! | AGAAGCAGAAGAATTTTCTC+AGG | + | chr4_2:51466537-51466556 | Msa0605530:CDS | 35.0% |
| ATCATAAGGAAGAGATCTGA+GGG | - | chr4_2:51466575-51466594 | None:intergenic | 35.0% | |
| AATCATAAGGAAGAGATCTG+AGG | - | chr4_2:51466576-51466595 | None:intergenic | 35.0% | |
| ACAGGAAAACCACAAACAAA+GGG | - | chr4_2:51466700-51466719 | None:intergenic | 35.0% | |
| ! | ATATAATGGAGATCTTGGAC+AGG | - | chr4_2:51466718-51466737 | None:intergenic | 35.0% |
| ! | TCATAACTTGCATATTGACC+AGG | + | chr4_2:51466849-51466868 | Msa0605530:intron | 35.0% |
| GGCAGATTACATATTGAAAG+TGG | + | chr4_2:51466948-51466967 | Msa0605530:CDS | 35.0% | |
| GATGACAGTATTTACAGCTT+CGG | - | chr4_2:51467064-51467083 | None:intergenic | 35.0% | |
| AATACTGTCATCACTCTTCT+TGG | + | chr4_2:51467072-51467091 | Msa0605530:CDS | 35.0% | |
| ! | GTAAGACATTTCTTTTCCCA+TGG | + | chr4_2:51467622-51467641 | Msa0605530:intron | 35.0% |
| ACCCGATTTAAGAGTTTCTT+AGG | + | chr4_2:51467850-51467869 | Msa0605530:intron | 35.0% | |
| TGGATTTCTCTTTCACTTCA+TGG | + | chr4_2:51467888-51467907 | Msa0605530:intron | 35.0% | |
| ATGTCATTGCTAACATCATC+TGG | + | chr4_2:51467935-51467954 | Msa0605530:intron | 35.0% | |
| TTCTTTCAGAAGTTCTTTGG+TGG | - | chr4_2:51468005-51468024 | None:intergenic | 35.0% | |
| CCTTTCTTTCAGAAGTTCTT+TGG | - | chr4_2:51468008-51468027 | None:intergenic | 35.0% | |
| ! | CCAAAGAACTTCTGAAAGAA+AGG | + | chr4_2:51468005-51468024 | Msa0605530:intron | 35.0% |
| GTAATACAACCGTATCTTCT+AGG | + | chr4_2:51468065-51468084 | Msa0605530:intron | 35.0% | |
| TATTGCCTTCCTAGAAGATA+CGG | - | chr4_2:51468077-51468096 | None:intergenic | 35.0% | |
| TTATTGTCGGGTGTATACAT+AGG | + | chr4_2:51468173-51468192 | Msa0605530:CDS | 35.0% | |
| TATTGTCGGGTGTATACATA+GGG | + | chr4_2:51468174-51468193 | Msa0605530:CDS | 35.0% | |
| AAAGGATGTTGCAATGAAAC+TGG | + | chr4_2:51468241-51468260 | Msa0605530:CDS | 35.0% | |
| !! | CAAGATATGTTGACTCAATG+CGG | + | chr4_2:51468338-51468357 | Msa0605530:three_prime_UTR | 35.0% |
| ! | TGCGGCCTAAATTTGTATTT+TGG | + | chr4_2:51468356-51468375 | Msa0605530:three_prime_UTR | 35.0% |
| AAAGAATTGCAACTTTGGCT+TGG | + | chr4_2:51468416-51468435 | Msa0605530:three_prime_UTR | 35.0% | |
| !! | AATACCCAGAAGTATCATGT+CGG | + | chr4_2:51468492-51468511 | Msa0605530:three_prime_UTR | 35.0% |
| !! | AAATTTACACTGGTTCGTTC+AGG | + | chr4_2:51468713-51468732 | Msa0605530:three_prime_UTR | 35.0% |
| !! | AATTTACACTGGTTCGTTCA+GGG | + | chr4_2:51468714-51468733 | Msa0605530:three_prime_UTR | 35.0% |
| ATGAATTACCTTCGTCGTCA+CGG | - | chr4_2:51461437-51461456 | None:intergenic | 40.0% | |
| TTGGATCTGGAAAATGAGCA+CGG | - | chr4_2:51461511-51461530 | None:intergenic | 40.0% | |
| TTCTATTGAGGAATGCGGTA+CGG | + | chr4_2:51461545-51461564 | Msa0605530:intron | 40.0% | |
| !! | CCCGTTTTTGGGAATTGAAA+AGG | + | chr4_2:51462091-51462110 | Msa0605530:CDS | 40.0% |
| ATGATCCACAACTAGATGCT+AGG | + | chr4_2:51462144-51462163 | Msa0605530:CDS | 40.0% | |
| !! | GTGCGTGTTTAACTTTTTCC+AGG | + | chr4_2:51462411-51462430 | Msa0605530:intron | 40.0% |
| TCAGGGAGAGACATTTACAA+AGG | + | chr4_2:51462462-51462481 | Msa0605530:intron | 40.0% | |
| ATCTCGAGATTGGAAAAGCT+TGG | - | chr4_2:51462645-51462664 | None:intergenic | 40.0% | |
| ! | CTTTTCCAATCTCGAGATCT+TGG | + | chr4_2:51462647-51462666 | Msa0605530:CDS | 40.0% |
| TTAACCCAAGATCTCGAGAT+TGG | - | chr4_2:51462655-51462674 | None:intergenic | 40.0% | |
| AATCTCGAGATCTTGGGTTA+AGG | + | chr4_2:51462654-51462673 | Msa0605530:CDS | 40.0% | |
| AGATCTTGGGTTAAGGAGAA+TGG | + | chr4_2:51462661-51462680 | Msa0605530:CDS | 40.0% | |
| TTTATAACCTCGTCTGCAGA+GGG | - | chr4_2:51462713-51462732 | None:intergenic | 40.0% | |
| ATTTATAACCTCGTCTGCAG+AGG | - | chr4_2:51462714-51462733 | None:intergenic | 40.0% | |
| TAGTGGTATTCATCTACTCC+AGG | + | chr4_2:51463034-51463053 | Msa0605530:CDS | 40.0% | |
| TCAGGATTTGTCTGAAAGTG+GGG | - | chr4_2:51463135-51463154 | None:intergenic | 40.0% | |
| CTCAGGATTTGTCTGAAAGT+GGG | - | chr4_2:51463136-51463155 | None:intergenic | 40.0% | |
| TCTCAGGATTTGTCTGAAAG+TGG | - | chr4_2:51463137-51463156 | None:intergenic | 40.0% | |
| ! | CTCCACCTTTTTACAATCTC+AGG | - | chr4_2:51463153-51463172 | None:intergenic | 40.0% |
| TGTAAAAAGGTGGAGCAATG+AGG | + | chr4_2:51463158-51463177 | Msa0605530:CDS | 40.0% | |
| ! | ATCACTGACGACAGAGTTTT+AGG | - | chr4_2:51463315-51463334 | None:intergenic | 40.0% |
| TTTGGAAAATGGAGGTGACA+GGG | - | chr4_2:51463541-51463560 | None:intergenic | 40.0% | |
| ATTTGGAAAATGGAGGTGAC+AGG | - | chr4_2:51463542-51463561 | None:intergenic | 40.0% | |
| ! | CTACAGCTGCAATTGATAAC+TGG | + | chr4_2:51463845-51463864 | Msa0605530:intron | 40.0% |
| ! | CAATGTGTCATTGATAGGAG+AGG | - | chr4_2:51463971-51463990 | None:intergenic | 40.0% |
| !! | GTAACGGATCAAGAGACATT+GGG | - | chr4_2:51464161-51464180 | None:intergenic | 40.0% |
| !! | TGTAACGGATCAAGAGACAT+TGG | - | chr4_2:51464162-51464181 | None:intergenic | 40.0% |
| ! | AACACACCTGACTTGTGTAA+CGG | - | chr4_2:51464177-51464196 | None:intergenic | 40.0% |
| TTCAAATGAATAGCCTCCCA+GGG | - | chr4_2:51464221-51464240 | None:intergenic | 40.0% | |
| ATTCAAATGAATAGCCTCCC+AGG | - | chr4_2:51464222-51464241 | None:intergenic | 40.0% | |
| !!! | GGTGATTTTTGAAGCTGCTA+AGG | + | chr4_2:51464358-51464377 | Msa0605530:CDS | 40.0% |
| !! | ATACTGGCTTGGAAGAACTT+AGG | - | chr4_2:51464451-51464470 | None:intergenic | 40.0% |
| ! | AGCAAATCTCAATACTGGCT+TGG | - | chr4_2:51464462-51464481 | None:intergenic | 40.0% |
| ACAGCAGCAAATCTCAATAC+TGG | - | chr4_2:51464467-51464486 | None:intergenic | 40.0% | |
| GAGAATGTCAACCTTGTTCA+AGG | - | chr4_2:51464495-51464514 | None:intergenic | 40.0% | |
| !! | TATGTTGATTCTCTCCCTTC+TGG | + | chr4_2:51464551-51464570 | Msa0605530:intron | 40.0% |
| !!! | AGTGTGGTTTTGAACTTTGC+AGG | + | chr4_2:51464702-51464721 | Msa0605530:intron | 40.0% |
| CTTCCCTAAGAATGTTACTC+AGG | - | chr4_2:51465102-51465121 | None:intergenic | 40.0% | |
| AACATTCTTAGGGAAGAAGG+TGG | + | chr4_2:51465106-51465125 | Msa0605530:CDS | 40.0% | |
| TAGAGATATCCCTGATGCTA+AGG | + | chr4_2:51465174-51465193 | Msa0605530:CDS | 40.0% | |
| ! | AATTTATCACCTGTGTCGAC+AGG | - | chr4_2:51465252-51465271 | None:intergenic | 40.0% |
| ! | TGGAGTATCTAAGGTACAAG+GGG | - | chr4_2:51465336-51465355 | None:intergenic | 40.0% |
| ! | GTGGAGTATCTAAGGTACAA+GGG | - | chr4_2:51465337-51465356 | None:intergenic | 40.0% |
| ! | AGTGGAGTATCTAAGGTACA+AGG | - | chr4_2:51465338-51465357 | None:intergenic | 40.0% |
| !! | TTTTTGGTCCTTCAATGCCA+AGG | - | chr4_2:51465362-51465381 | None:intergenic | 40.0% |
| TGGACCCCAGCAAATATATT+CGG | + | chr4_2:51465385-51465404 | Msa0605530:CDS | 40.0% | |
| ATCTCGAGAATGCAACTGTT+AGG | + | chr4_2:51465427-51465446 | Msa0605530:CDS | 40.0% | |
| TCTCGAGAATGCAACTGTTA+GGG | + | chr4_2:51465428-51465447 | Msa0605530:CDS | 40.0% | |
| CTTAGCAGAACAAATATGCG+GGG | - | chr4_2:51465611-51465630 | None:intergenic | 40.0% | |
| CCTTAGCAGAACAAATATGC+GGG | - | chr4_2:51465612-51465631 | None:intergenic | 40.0% | |
| GCCTTAGCAGAACAAATATG+CGG | - | chr4_2:51465613-51465632 | None:intergenic | 40.0% | |
| !! | TCTTTTTGACAGTGATGACG+AGG | + | chr4_2:51465637-51465656 | Msa0605530:CDS | 40.0% |
| ! | TGTGGTTCCTACGATTTTCA+AGG | + | chr4_2:51465700-51465719 | Msa0605530:intron | 40.0% |
| CTGAGATTGATAAAGATGCG+AGG | + | chr4_2:51465835-51465854 | Msa0605530:CDS | 40.0% | |
| !! | TGACATTAATTTGGTGCCCA+AGG | + | chr4_2:51466015-51466034 | Msa0605530:CDS | 40.0% |
| TAAAAAGCCAACTGGTGGTT+TGG | + | chr4_2:51466078-51466097 | Msa0605530:CDS | 40.0% | |
| AAAAAGCCAACTGGTGGTTT+GGG | + | chr4_2:51466079-51466098 | Msa0605530:CDS | 40.0% | |
| ATATGAATCCACAGTGGATG+GGG | - | chr4_2:51466122-51466141 | None:intergenic | 40.0% | |
| CATATGAATCCACAGTGGAT+GGG | - | chr4_2:51466123-51466142 | None:intergenic | 40.0% | |
| TCATATGAATCCACAGTGGA+TGG | - | chr4_2:51466124-51466143 | None:intergenic | 40.0% | |
| CCTTTCATATGAATCCACAG+TGG | - | chr4_2:51466128-51466147 | None:intergenic | 40.0% | |
| CCACTGTGGATTCATATGAA+AGG | + | chr4_2:51466125-51466144 | Msa0605530:CDS | 40.0% | |
| TTCCCAAAGTTTGCAAACTC+AGG | - | chr4_2:51466166-51466185 | None:intergenic | 40.0% | |
| CACAATACCCGAACAACTAT+TGG | + | chr4_2:51466404-51466423 | Msa0605530:CDS | 40.0% | |
| CATCCACAACTACAATAACC+TGG | - | chr4_2:51466513-51466532 | None:intergenic | 40.0% | |
| TCATAAGGAAGAGATCTGAG+GGG | - | chr4_2:51466574-51466593 | None:intergenic | 40.0% | |
| TCTCTTCCTTATGATTCACC+TGG | + | chr4_2:51466580-51466599 | Msa0605530:CDS | 40.0% | |
| CTCTTCCTTATGATTCACCT+GGG | + | chr4_2:51466581-51466600 | Msa0605530:CDS | 40.0% | |
| ! | GTACGTATTCCCTTTGTTTG+TGG | + | chr4_2:51466688-51466707 | Msa0605530:intron | 40.0% |
| GACAGGAAAACCACAAACAA+AGG | - | chr4_2:51466701-51466720 | None:intergenic | 40.0% | |
| TGTCTAATTTCAGGAACGCA+TGG | + | chr4_2:51466974-51466993 | Msa0605530:CDS | 40.0% | |
| GTCTAATTTCAGGAACGCAT+GGG | + | chr4_2:51466975-51466994 | Msa0605530:CDS | 40.0% | |
| TCTGAACGAGTGGATGAATA+CGG | + | chr4_2:51467015-51467034 | Msa0605530:CDS | 40.0% | |
| TAAGCCAATGATGTCAGTTG+TGG | + | chr4_2:51467112-51467131 | Msa0605530:intron | 40.0% | |
| ATTACTGCAACTGCAACATG+AGG | + | chr4_2:51467200-51467219 | Msa0605530:intron | 40.0% | |
| CTGGAAAGAATCTAATTGGG+AGG | - | chr4_2:51467232-51467251 | None:intergenic | 40.0% | |
| ! | TTTTGCTCTCCAATAAGGCA+TGG | - | chr4_2:51467316-51467335 | None:intergenic | 40.0% |
| ! | TTGGGTTTTGCTCTCCAATA+AGG | - | chr4_2:51467321-51467340 | None:intergenic | 40.0% |
| TTAAAAGGAACTAAGCGGAC+TGG | - | chr4_2:51467425-51467444 | None:intergenic | 40.0% | |
| ATTGCTAAACTCAAGCCACA+AGG | + | chr4_2:51467469-51467488 | Msa0605530:intron | 40.0% | |
| GTGAAGTAGAAGAGATTCTC+TGG | + | chr4_2:51467589-51467608 | Msa0605530:intron | 40.0% | |
| TTGCATCTATAACCTCGTTG+TGG | - | chr4_2:51467798-51467817 | None:intergenic | 40.0% | |
| TCAATGGTCTATGCTTACAC+AGG | - | chr4_2:51467828-51467847 | None:intergenic | 40.0% | |
| CTCTTAAATCGGGTTCTCAA+TGG | - | chr4_2:51467844-51467863 | None:intergenic | 40.0% | |
| TTAGGTTCTCGTGAGAGTAA+TGG | + | chr4_2:51467868-51467887 | Msa0605530:intron | 40.0% | |
| AGCCAATACTTTATCTCGAG+TGG | - | chr4_2:51467914-51467933 | None:intergenic | 40.0% | |
| ! | TACAACCGTATCTTCTAGGA+AGG | + | chr4_2:51468069-51468088 | Msa0605530:intron | 40.0% |
| TGTGTGACCTTGAATTAGGT+GGG | - | chr4_2:51468148-51468167 | None:intergenic | 40.0% | |
| CATGTGTGTGACCTTGAATT+AGG | - | chr4_2:51468152-51468171 | None:intergenic | 40.0% | |
| GTCACACACATGCTTATTGT+CGG | + | chr4_2:51468160-51468179 | Msa0605530:CDS | 40.0% | |
| TCACACACATGCTTATTGTC+GGG | + | chr4_2:51468161-51468180 | Msa0605530:CDS | 40.0% | |
| ATTGTCGGGTGTATACATAG+GGG | + | chr4_2:51468175-51468194 | Msa0605530:CDS | 40.0% | |
| !!! | TTTTGGACTTGATGGTGCAA+AGG | + | chr4_2:51468223-51468242 | Msa0605530:CDS | 40.0% |
| AGTTAAACAGCCACATAGCT+AGG | + | chr4_2:51468386-51468405 | Msa0605530:three_prime_UTR | 40.0% | |
| TTTACACACACCTAGCTATG+TGG | - | chr4_2:51468399-51468418 | None:intergenic | 40.0% | |
| ! | TGACAAGAAGTATGCAGTGA+GGG | - | chr4_2:51468460-51468479 | None:intergenic | 40.0% |
| !! | ATACCCAGAAGTATCATGTC+GGG | + | chr4_2:51468493-51468512 | Msa0605530:three_prime_UTR | 40.0% |
| AAACCCGACATGATACTTCT+GGG | - | chr4_2:51468499-51468518 | None:intergenic | 40.0% | |
| TAAACCCGACATGATACTTC+TGG | - | chr4_2:51468500-51468519 | None:intergenic | 40.0% | |
| CTTCAGTGGTGCACTTACAA+AGG | + | chr4_2:51461319-51461338 | Msa0605530:five_prime_UTR | 45.0% | |
| CATCTCCTAGCATCTAGTTG+TGG | - | chr4_2:51462152-51462171 | None:intergenic | 45.0% | |
| AGATGCTAGGAGATGTTCAC+AGG | + | chr4_2:51462157-51462176 | Msa0605530:CDS | 45.0% | |
| CGGATACCAACATGAGTTGT+CGG | + | chr4_2:51462317-51462336 | Msa0605530:intron | 45.0% | |
| !! | CTTCTGATTGATGGTGTGTC+CGG | - | chr4_2:51462346-51462365 | None:intergenic | 45.0% |
| GCACAGACACTTCTGATTGA+TGG | - | chr4_2:51462355-51462374 | None:intergenic | 45.0% | |
| !! | CAGAAGTGTCTGTGCTACAT+AGG | + | chr4_2:51462360-51462379 | Msa0605530:intron | 45.0% |
| ATGTCTCTCCCTGATTCAGT+AGG | - | chr4_2:51462456-51462475 | None:intergenic | 45.0% | |
| TTATAACCTCGTCTGCAGAG+GGG | - | chr4_2:51462712-51462731 | None:intergenic | 45.0% | |
| ATGCCATTCGTGTGCTTTGT+CGG | + | chr4_2:51462919-51462938 | Msa0605530:CDS | 45.0% | |
| CCTCTCAATTTGGGTAAGGA+GGG | - | chr4_2:51462958-51462977 | None:intergenic | 45.0% | |
| ACCTCTCAATTTGGGTAAGG+AGG | - | chr4_2:51462959-51462978 | None:intergenic | 45.0% | |
| GAATCCAGTTGTTGCAAGTG+CGG | + | chr4_2:51463004-51463023 | Msa0605530:CDS | 45.0% | |
| CAGGATTTGTCTGAAAGTGG+GGG | - | chr4_2:51463134-51463153 | None:intergenic | 45.0% | |
| TCTTGTACAATTTCACGCGC+TGG | + | chr4_2:51463209-51463228 | Msa0605530:CDS | 45.0% | |
| AAGCTTAAGCTGTCCACTGA+AGG | - | chr4_2:51463606-51463625 | None:intergenic | 45.0% | |
| TCGACTAGCAGTTAGCAAAC+TGG | + | chr4_2:51464096-51464115 | Msa0605530:CDS | 45.0% | |
| AACTGGTTACCAGCTTGACA+AGG | + | chr4_2:51464113-51464132 | Msa0605530:CDS | 45.0% | |
| ACTGGTTACCAGCTTGACAA+GGG | + | chr4_2:51464114-51464133 | Msa0605530:CDS | 45.0% | |
| ATCAAGAGACATTGGGCCAA+AGG | - | chr4_2:51464154-51464173 | None:intergenic | 45.0% | |
| CTTGATCCGTTACACAAGTC+AGG | + | chr4_2:51464168-51464187 | Msa0605530:CDS | 45.0% | |
| CTTATATAGTTGTCCCTGGG+AGG | + | chr4_2:51464205-51464224 | Msa0605530:intron | 45.0% | |
| ! | CTCGGCTAGTTACACCATTA+AGG | - | chr4_2:51464394-51464413 | None:intergenic | 45.0% |
| AGCTGAAGAACAGTGATTGC+TGG | - | chr4_2:51464425-51464444 | None:intergenic | 45.0% | |
| TGTCAACCTTGTTCAAGGTG+CGG | - | chr4_2:51464490-51464509 | None:intergenic | 45.0% | |
| !!! | GTGGTTTTGAACTTTGCAGG+TGG | + | chr4_2:51464705-51464724 | Msa0605530:intron | 45.0% |
| GACAGGAAATGAATCAAGCG+TGG | + | chr4_2:51464834-51464853 | Msa0605530:CDS | 45.0% | |
| ATCCCTGATGCTAAGGAAAG+TGG | + | chr4_2:51465181-51465200 | Msa0605530:CDS | 45.0% | |
| TCCCTGATGCTAAGGAAAGT+GGG | + | chr4_2:51465182-51465201 | Msa0605530:CDS | 45.0% | |
| ACCCACTTTCCTTAGCATCA+GGG | - | chr4_2:51465186-51465205 | None:intergenic | 45.0% | |
| AACCCACTTTCCTTAGCATC+AGG | - | chr4_2:51465187-51465206 | None:intergenic | 45.0% | |
| ATTCACTTACCTGTCGACAC+AGG | + | chr4_2:51465240-51465259 | Msa0605530:CDS | 45.0% | |
| ! | CCAAGGAAGTGGAGTATCTA+AGG | - | chr4_2:51465345-51465364 | None:intergenic | 45.0% |
| CCTTAGATACTCCACTTCCT+TGG | + | chr4_2:51465342-51465361 | Msa0605530:intron | 45.0% | |
| ! | TTGCTGGGGTCCAATGTTTT+TGG | - | chr4_2:51465378-51465397 | None:intergenic | 45.0% |
| GTGAGCACACTAGCCAAATT+TGG | + | chr4_2:51465459-51465478 | Msa0605530:CDS | 45.0% | |
| CCCGCATATTTGTTCTGCTA+AGG | + | chr4_2:51465609-51465628 | Msa0605530:CDS | 45.0% | |
| CATGTTTCCTCTTTGACTGC+AGG | + | chr4_2:51465973-51465992 | Msa0605530:intron | 45.0% | |
| ATGTCAAAAGCCTCTTCCGA+AGG | - | chr4_2:51466001-51466020 | None:intergenic | 45.0% | |
| !! | CATTAATTTGGTGCCCAAGG+AGG | + | chr4_2:51466018-51466037 | Msa0605530:CDS | 45.0% |
| TTTACCAGGGGCTTTCTTCT+CGG | - | chr4_2:51466062-51466081 | None:intergenic | 45.0% | |
| !!! | ACCAGTTGGCTTTTTACCAG+GGG | - | chr4_2:51466074-51466093 | None:intergenic | 45.0% |
| !!! | CACCAGTTGGCTTTTTACCA+GGG | - | chr4_2:51466075-51466094 | None:intergenic | 45.0% |
| TATGAATCCACAGTGGATGG+GGG | - | chr4_2:51466121-51466140 | None:intergenic | 45.0% | |
| CGTTGAAGATGAATACCAGC+TGG | + | chr4_2:51466906-51466925 | Msa0605530:CDS | 45.0% | |
| TGAAGATGAATACCAGCTGG+AGG | + | chr4_2:51466909-51466928 | Msa0605530:CDS | 45.0% | |
| !! | AAGTGGGGGTGTCTAATTTC+AGG | + | chr4_2:51466965-51466984 | Msa0605530:CDS | 45.0% |
| CATCCACTCGTTCAGAATCA+GGG | - | chr4_2:51467011-51467030 | None:intergenic | 45.0% | |
| TCATCCACTCGTTCAGAATC+AGG | - | chr4_2:51467012-51467031 | None:intergenic | 45.0% | |
| !! | CATCATTGGCTTACCTCACA+AGG | - | chr4_2:51467105-51467124 | None:intergenic | 45.0% |
| GAAGCCACAACTGACATCAT+TGG | - | chr4_2:51467119-51467138 | None:intergenic | 45.0% | |
| GAAAGTGAACGCCAACGTTT+GGG | - | chr4_2:51467339-51467358 | None:intergenic | 45.0% | |
| AGAAAGTGAACGCCAACGTT+TGG | - | chr4_2:51467340-51467359 | None:intergenic | 45.0% | |
| AAGAGATTCTCTGGTGCTTC+AGG | + | chr4_2:51467598-51467617 | Msa0605530:intron | 45.0% | |
| GGGATTGATCTTTGAGCCAT+GGG | - | chr4_2:51467641-51467660 | None:intergenic | 45.0% | |
| TGGGATTGATCTTTGAGCCA+TGG | - | chr4_2:51467642-51467661 | None:intergenic | 45.0% | |
| TCTATAACCTCGTTGTGGCA+GGG | - | chr4_2:51467793-51467812 | None:intergenic | 45.0% | |
| ATCTATAACCTCGTTGTGGC+AGG | - | chr4_2:51467794-51467813 | None:intergenic | 45.0% | |
| GGCCACTCGAGATAAAGTAT+TGG | + | chr4_2:51467909-51467928 | Msa0605530:intron | 45.0% | |
| ! | TGCTAACATCATCTGGAACC+TGG | + | chr4_2:51467942-51467961 | Msa0605530:intron | 45.0% |
| ! | GTTCTTTGGTGGTACTAGCA+TGG | - | chr4_2:51467994-51468013 | None:intergenic | 45.0% |
| GTGTGTGACCTTGAATTAGG+TGG | - | chr4_2:51468149-51468168 | None:intergenic | 45.0% | |
| TTGTCGGGTGTATACATAGG+GGG | + | chr4_2:51468176-51468195 | Msa0605530:CDS | 45.0% | |
| ! | TGTATACATAGGGGGTGTGA+AGG | + | chr4_2:51468184-51468203 | Msa0605530:CDS | 45.0% |
| TGATGCCATCCATGAGATTG+TGG | + | chr4_2:51468292-51468311 | Msa0605530:CDS | 45.0% | |
| ATCCATGAGATTGTGGCAAG+CGG | + | chr4_2:51468299-51468318 | Msa0605530:CDS | 45.0% | |
| ! | CTGACAAGAAGTATGCAGTG+AGG | - | chr4_2:51468461-51468480 | None:intergenic | 45.0% |
| ! | ACTTCTGGGTATTGTTGCTG+AGG | - | chr4_2:51468485-51468504 | None:intergenic | 45.0% |
| !! | AGAAAATAATTAATAAATAA+AGG | - | chr4_2:51465516-51465535 | None:intergenic | 5.0% |
| GGTGGTGAATCTGTGAGATC+TGG | - | chr4_2:51461372-51461391 | None:intergenic | 50.0% | |
| CACAGATTCACCACCTTCTC+CGG | + | chr4_2:51461377-51461396 | Msa0605530:five_prime_UTR | 50.0% | |
| ACTTCGGTTAGGACTCAAGC+TGG | + | chr4_2:51461984-51462003 | Msa0605530:intron | 50.0% | |
| AAAGGGGGCTGTTCTTCAAG+AGG | + | chr4_2:51462109-51462128 | Msa0605530:CDS | 50.0% | |
| GTGCTGTGTCAGTGCTTCAT+TGG | - | chr4_2:51462232-51462251 | None:intergenic | 50.0% | |
| CAACATGAGTTGTCGGACTC+CGG | + | chr4_2:51462324-51462343 | Msa0605530:intron | 50.0% | |
| TATAACCTCGTCTGCAGAGG+GGG | - | chr4_2:51462711-51462730 | None:intergenic | 50.0% | |
| GATCCGACAAAGCACACGAA+TGG | - | chr4_2:51462925-51462944 | None:intergenic | 50.0% | |
| TCGTGTGCTTTGTCGGATCA+CGG | + | chr4_2:51462926-51462945 | Msa0605530:CDS | 50.0% | |
| CCCTCCTTACCCAAATTGAG+AGG | + | chr4_2:51462955-51462974 | Msa0605530:CDS | 50.0% | |
| AAGGTGGAGCAATGAGGTTC+AGG | + | chr4_2:51463164-51463183 | Msa0605530:CDS | 50.0% | |
| CTGGTTACCAGCTTGACAAG+GGG | + | chr4_2:51464115-51464134 | Msa0605530:CDS | 50.0% | |
| AACACTTCCCCTTGTCAAGC+TGG | - | chr4_2:51464125-51464144 | None:intergenic | 50.0% | |
| CCATTTCGGACTTGTGACGA+AGG | - | chr4_2:51464340-51464359 | None:intergenic | 50.0% | |
| CCTTCGTCACAAGTCCGAAA+TGG | + | chr4_2:51464337-51464356 | Msa0605530:CDS | 50.0% | |
| ! | GTTGATTCTCTCCCTTCTGG+AGG | + | chr4_2:51464554-51464573 | Msa0605530:intron | 50.0% |
| AGCAAAATGCGCCTCCAGAA+GGG | - | chr4_2:51464568-51464587 | None:intergenic | 50.0% | |
| AAGCAAAATGCGCCTCCAGA+AGG | - | chr4_2:51464569-51464588 | None:intergenic | 50.0% | |
| GGTGGCAATGACACATCCAA+TGG | + | chr4_2:51464723-51464742 | Msa0605530:intron | 50.0% | |
| TTGCAGTTAGTGACGGCCAT+TGG | - | chr4_2:51464742-51464761 | None:intergenic | 50.0% | |
| GTGTGGCAATGCTTCTGTTC+TGG | - | chr4_2:51464792-51464811 | None:intergenic | 50.0% | |
| ! | CTCCACTTCCTTGGCATTGA+AGG | + | chr4_2:51465351-51465370 | Msa0605530:CDS | 50.0% |
| GTCCTTCAATGCCAAGGAAG+TGG | - | chr4_2:51465356-51465375 | None:intergenic | 50.0% | |
| GGATATCAAGTGAGCCGAAG+AGG | - | chr4_2:51465866-51465885 | None:intergenic | 50.0% | |
| TGATATCCCGCTCGTCAATC+TGG | + | chr4_2:51465878-51465897 | Msa0605530:CDS | 50.0% | |
| TCTTTGACTGCAGGAGCCTT+CGG | + | chr4_2:51465982-51466001 | Msa0605530:intron | 50.0% | |
| !!! | CCACCAGTTGGCTTTTTACC+AGG | - | chr4_2:51466076-51466095 | None:intergenic | 50.0% |
| CCTGGTAAAAAGCCAACTGG+TGG | + | chr4_2:51466073-51466092 | Msa0605530:CDS | 50.0% | |
| TCTGCTTCAGTAAGCTCCAC+AGG | - | chr4_2:51466312-51466331 | None:intergenic | 50.0% | |
| AGGAAGAGATCTGAGGGGTT+TGG | - | chr4_2:51466569-51466588 | None:intergenic | 50.0% | |
| GTCTGCCCAGGTGAATCATA+AGG | - | chr4_2:51466589-51466608 | None:intergenic | 50.0% | |
| ! | TTCACCTGGGCAGACTTTTG+TGG | + | chr4_2:51466594-51466613 | Msa0605530:CDS | 50.0% |
| ATACCAGCTGGAGGATCTAG+AGG | + | chr4_2:51466918-51466937 | Msa0605530:CDS | 50.0% | |
| GGAGGATCTAGAGGTTGTTG+CGG | + | chr4_2:51466927-51466946 | Msa0605530:CDS | 50.0% | |
| CGAGTGGATGAATACGGTCT+TGG | + | chr4_2:51467021-51467040 | Msa0605530:CDS | 50.0% | |
| ATGAATACGGTCTTGGCCCA+AGG | + | chr4_2:51467028-51467047 | Msa0605530:CDS | 50.0% | |
| TGAATACGGTCTTGGCCCAA+GGG | + | chr4_2:51467029-51467048 | Msa0605530:CDS | 50.0% | |
| TCTTGGCATGCAACCTTGTG+AGG | + | chr4_2:51467089-51467108 | Msa0605530:CDS | 50.0% | |
| GGAGAGCAAAACCCAAACGT+TGG | + | chr4_2:51467325-51467344 | Msa0605530:intron | 50.0% | |
| GTGAACATGTGCTTGCACAC+AGG | + | chr4_2:51467550-51467569 | Msa0605530:intron | 50.0% | |
| AGGTCGTCCCACCTAATTCA+AGG | + | chr4_2:51468138-51468157 | Msa0605530:CDS | 50.0% | |
| ! | GTACTTGTGCGGCTGTCTTT+TGG | + | chr4_2:51468206-51468225 | Msa0605530:CDS | 50.0% |
| ! | CGGCTGTCTTTTGGACTTGA+TGG | + | chr4_2:51468215-51468234 | Msa0605530:CDS | 50.0% |
| GCTTGCCACAATCTCATGGA+TGG | - | chr4_2:51468300-51468319 | None:intergenic | 50.0% | |
| AACCGCTTGCCACAATCTCA+TGG | - | chr4_2:51468304-51468323 | None:intergenic | 50.0% | |
| CAGCACAACACAGTCGACAC+TGG | + | chr4_2:51462246-51462265 | Msa0605530:intron | 55.0% | |
| CGGAGTCCGACAACTCATGT+TGG | - | chr4_2:51462326-51462345 | None:intergenic | 55.0% | |
| CGTCACGAGCTCTCTCATGA+AGG | + | chr4_2:51462863-51462882 | Msa0605530:CDS | 55.0% | |
| GTGCTTTGTCGGATCACGGA+TGG | + | chr4_2:51462930-51462949 | Msa0605530:CDS | 55.0% | |
| !! | GGGAAGTGTTCGCTCACCTT+TGG | + | chr4_2:51464135-51464154 | Msa0605530:CDS | 55.0% |
| CTGCAGGTTATTCGCGAGTC+AGG | + | chr4_2:51464263-51464282 | Msa0605530:intron | 55.0% | |
| TGCTGTCCGCACCTTGAACA+AGG | + | chr4_2:51464481-51464500 | Msa0605530:CDS | 55.0% | |
| GATGCGAGGGACTTCCTCTT+CGG | + | chr4_2:51465849-51465868 | Msa0605530:CDS | 55.0% | |
| TGGTCTCCAGATTGACGAGC+GGG | - | chr4_2:51465887-51465906 | None:intergenic | 55.0% | |
| CTGGTCTCCAGATTGACGAG+CGG | - | chr4_2:51465888-51465907 | None:intergenic | 55.0% | |
| GAAGGCTCCTGCAGTCAAAG+AGG | - | chr4_2:51465983-51466002 | None:intergenic | 55.0% | |
| GGCTGAGACTTGACCTCCTT+GGG | - | chr4_2:51466034-51466053 | None:intergenic | 55.0% | |
| AGGCTGAGACTTGACCTCCT+TGG | - | chr4_2:51466035-51466054 | None:intergenic | 55.0% | |
| GCCCCTGGTAAAAAGCCAAC+TGG | + | chr4_2:51466070-51466089 | Msa0605530:CDS | 55.0% | |
| GTTTGGGTGCTCCTCCTAGT+GGG | + | chr4_2:51466095-51466114 | Msa0605530:CDS | 55.0% | |
| TTACCAGTCCTCAGCACCTG+TGG | + | chr4_2:51466293-51466312 | Msa0605530:intron | 55.0% | |
| ! | AGTAAGCTCCACAGGTGCTG+AGG | - | chr4_2:51466304-51466323 | None:intergenic | 55.0% |
| AACGCCACAAAAGTCTGCCC+AGG | - | chr4_2:51466601-51466620 | None:intergenic | 55.0% | |
| TGTGGCGTTTGAGAAGCCTG+AGG | + | chr4_2:51466612-51466631 | Msa0605530:CDS | 55.0% | |
| GTGGCGTTTGAGAAGCCTGA+GGG | + | chr4_2:51466613-51466632 | Msa0605530:CDS | 55.0% | |
| CCAGATGTTGGCAATCCCTC+AGG | - | chr4_2:51466631-51466650 | None:intergenic | 55.0% | |
| CCTGAGGGATTGCCAACATC+TGG | + | chr4_2:51466628-51466647 | Msa0605530:CDS | 55.0% | |
| ATCATCTTCAGCCTCGCCAG+AGG | - | chr4_2:51466884-51466903 | None:intergenic | 55.0% | |
| TCTGGCGAGGCTGAAGATGA+TGG | + | chr4_2:51466883-51466902 | Msa0605530:CDS | 55.0% | |
| CAACCTCTAGATCCTCCAGC+TGG | - | chr4_2:51466924-51466943 | None:intergenic | 55.0% | |
| CAGGAACGCATGGGAAAGCA+TGG | + | chr4_2:51466984-51467003 | Msa0605530:CDS | 55.0% | |
| GGACCCTGATTCTGAACGAG+TGG | + | chr4_2:51467005-51467024 | Msa0605530:CDS | 55.0% | |
| CTTCGGACAAGCCTTCCCTT+GGG | - | chr4_2:51467047-51467066 | None:intergenic | 55.0% | |
| GTCAAATCCCTGCCACAACG+AGG | + | chr4_2:51467783-51467802 | Msa0605530:intron | 55.0% | |
| TCACTACTTGCAGGGCACAG+AGG | + | chr4_2:51468118-51468137 | Msa0605530:intron | 55.0% | |
| !! | GGGGTGTGAAGGTACTTGTG+CGG | + | chr4_2:51468195-51468214 | Msa0605530:CDS | 55.0% |
| TTCACCACCTTCTCCGGCGA+TGG | + | chr4_2:51461383-51461402 | Msa0605530:exon | 60.0% | |
| ATAAGCGGCTGAGCCATCGC+CGG | - | chr4_2:51461399-51461418 | None:intergenic | 60.0% | |
| GACGATGACCGTGACGACGA+AGG | + | chr4_2:51461426-51461445 | Msa0605530:CDS | 60.0% | |
| GGGCTGTTCTTCAAGAGGCC+CGG | + | chr4_2:51462114-51462133 | Msa0605530:CDS | 60.0% | |
| GGCTGTTCTTCAAGAGGCCC+GGG | + | chr4_2:51462115-51462134 | Msa0605530:CDS | 60.0% | |
| ACTTTCCCCCTCTGCAGACG+AGG | + | chr4_2:51462703-51462722 | Msa0605530:CDS | 60.0% | |
| AGGGCCGCACTTGCAACAAC+TGG | - | chr4_2:51463011-51463030 | None:intergenic | 60.0% | |
| GCAAGTGCGGCCCTAGTTAG+TGG | + | chr4_2:51463017-51463036 | Msa0605530:CDS | 60.0% | |
| !! | CGCGCTGGCTTTGCTACATC+AGG | + | chr4_2:51463224-51463243 | Msa0605530:CDS | 60.0% |
| GGCTAGTGTGCTCACAGCAC+TGG | - | chr4_2:51465454-51465473 | None:intergenic | 60.0% | |
| ACTGCAGGAGCCTTCGGAAG+AGG | + | chr4_2:51465988-51466007 | Msa0605530:intron | 60.0% | |
| GGGGCTTTCTTCTCGGCAAG+AGG | - | chr4_2:51466055-51466074 | None:intergenic | 60.0% | |
| CTTGCCGAGAAGAAAGCCCC+TGG | + | chr4_2:51466055-51466074 | Msa0605530:CDS | 60.0% | |
| ! | GGAGCACCCAAACCACCAGT+TGG | - | chr4_2:51466088-51466107 | None:intergenic | 60.0% |
| GGTTTGGGTGCTCCTCCTAG+TGG | + | chr4_2:51466094-51466113 | Msa0605530:CDS | 60.0% | |
| ! | GACCAGGTTGACCCAACCTC+TGG | + | chr4_2:51466865-51466884 | Msa0605530:intron | 60.0% |
| CTTCAGCCTCGCCAGAGGTT+GGG | - | chr4_2:51466879-51466898 | None:intergenic | 60.0% | |
| TCTTCAGCCTCGCCAGAGGT+TGG | - | chr4_2:51466880-51466899 | None:intergenic | 60.0% | |
| TACGGTCTTGGCCCAAGGGA+AGG | + | chr4_2:51467033-51467052 | Msa0605530:CDS | 60.0% | |
| GCTTCGGACAAGCCTTCCCT+TGG | - | chr4_2:51467048-51467067 | None:intergenic | 60.0% | |
| GCTACTCATGGGCGTCCTTG+TGG | - | chr4_2:51467487-51467506 | None:intergenic | 60.0% | |
| TGAGCCATCGCCGGAGAAGG+TGG | - | chr4_2:51461390-51461409 | None:intergenic | 65.0% | |
| ACAGTGGATGGGGGCCCACT+AGG | - | chr4_2:51466112-51466131 | None:intergenic | 65.0% | |
| ! | TAGTGGGCCCCCATCCACTG+TGG | + | chr4_2:51466111-51466130 | Msa0605530:CDS | 65.0% |
| !! | GCTCCACAGGTGCTGAGGAC+TGG | - | chr4_2:51466299-51466318 | None:intergenic | 65.0% |
| CGCCAGAGGTTGGGTCAACC+TGG | - | chr4_2:51466870-51466889 | None:intergenic | 65.0% | |
| GGTTGACCCAACCTCTGGCG+AGG | + | chr4_2:51466870-51466889 | Msa0605530:intron | 65.0% | |
| GGCTGAGCCATCGCCGGAGA+AGG | - | chr4_2:51461393-51461412 | None:intergenic | 70.0% | |
| GTGGATGGGGGCCCACTAGG+AGG | - | chr4_2:51466109-51466128 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 51461254 | 51468749 | 51461254 | ID=Msa0605530;Name=Msa0605530 |
| chr4_2 | mRNA | 51461254 | 51468749 | 51461254 | ID=Msa0605530-mRNA-1;Parent=Msa0605530;Name=Msa0605530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=148|0.87|0.94|1|0.93|1|17|424|857 |
| chr4_2 | exon | 51461254 | 51461447 | 51461254 | ID=Msa0605530-mRNA-1:exon:12277;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51462081 | 51462178 | 51462081 | ID=Msa0605530-mRNA-1:exon:12278;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51462611 | 51462724 | 51462611 | ID=Msa0605530-mRNA-1:exon:12279;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51462855 | 51463055 | 51462855 | ID=Msa0605530-mRNA-1:exon:12280;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51463144 | 51463245 | 51463144 | ID=Msa0605530-mRNA-1:exon:12281;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51464082 | 51464189 | 51464082 | ID=Msa0605530-mRNA-1:exon:12282;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51464269 | 51464502 | 51464269 | ID=Msa0605530-mRNA-1:exon:12283;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51464724 | 51464941 | 51464724 | ID=Msa0605530-mRNA-1:exon:12284;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51465090 | 51465261 | 51465090 | ID=Msa0605530-mRNA-1:exon:12285;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51465348 | 51465503 | 51465348 | ID=Msa0605530-mRNA-1:exon:12286;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51465608 | 51465658 | 51465608 | ID=Msa0605530-mRNA-1:exon:12287;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51465789 | 51465920 | 51465789 | ID=Msa0605530-mRNA-1:exon:12288;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51465995 | 51466195 | 51465995 | ID=Msa0605530-mRNA-1:exon:12289;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51466300 | 51466431 | 51466300 | ID=Msa0605530-mRNA-1:exon:12290;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51466514 | 51466687 | 51466514 | ID=Msa0605530-mRNA-1:exon:12291;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51466871 | 51467110 | 51466871 | ID=Msa0605530-mRNA-1:exon:12292;Parent=Msa0605530-mRNA-1 |
| chr4_2 | exon | 51468131 | 51468749 | 51468131 | ID=Msa0605530-mRNA-1:exon:12293;Parent=Msa0605530-mRNA-1 |
| chr4_2 | five_prime_UTR | 51461254 | 51461401 | 51461254 | ID=Msa0605530-mRNA-1:five_prime_utr;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51461402 | 51461447 | 51461402 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51462081 | 51462178 | 51462081 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51462611 | 51462724 | 51462611 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51462855 | 51463055 | 51462855 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51463144 | 51463245 | 51463144 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51464082 | 51464189 | 51464082 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51464269 | 51464502 | 51464269 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51464724 | 51464941 | 51464724 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51465090 | 51465261 | 51465090 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51465348 | 51465503 | 51465348 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51465608 | 51465658 | 51465608 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51465789 | 51465920 | 51465789 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51465995 | 51466195 | 51465995 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51466300 | 51466431 | 51466300 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51466514 | 51466687 | 51466514 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51466871 | 51467110 | 51466871 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | CDS | 51468131 | 51468325 | 51468131 | ID=Msa0605530-mRNA-1:cds;Parent=Msa0605530-mRNA-1 |
| chr4_2 | three_prime_UTR | 51468326 | 51468749 | 51468326 | ID=Msa0605530-mRNA-1:three_prime_utr;Parent=Msa0605530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
