AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0650080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0650080 MtrunA17_Chr4g0042081 96.138 492 12 1 475 959 499 990 0.0 930
Msa0650080 MtrunA17_Chr2g0319201 67.871 498 141 9 466 949 358 850 0.0 664
Msa0650080 MtrunA17_Chr2g0319201 45.000 140 72 2 3 141 4 139 1.00e-27 120
Msa0650080 MtrunA17_Chr4g0023611 59.662 533 186 7 441 957 347 866 0.0 565
Msa0650080 MtrunA17_Chr2g0323071 57.196 542 209 7 419 949 241 770 0.0 552
Msa0650080 MtrunA17_Chr1g0192111 50.361 415 195 6 504 915 496 902 1.47e-126 405
Msa0650080 MtrunA17_Chr4g0054001 49.048 420 197 6 500 911 409 819 3.35e-123 395
Msa0650080 MtrunA17_Chr8g0347491 46.541 477 217 10 455 911 573 1031 7.34e-120 392
Msa0650080 MtrunA17_Chr5g0401291 51.079 417 185 9 496 905 460 864 8.67e-120 387
Msa0650080 MtrunA17_Chr4g0045881 47.846 441 198 10 496 911 420 853 5.43e-117 379
Msa0650080 MtrunA17_Chr7g0249941 47.651 447 208 10 468 905 536 965 2.14e-115 378
Msa0650080 MtrunA17_Chr5g0414941 39.700 466 248 10 475 911 380 841 2.04e-93 315
Msa0650080 MtrunA17_Chr8g0364331 37.701 435 244 10 499 911 303 732 5.88e-87 295
Msa0650080 MtrunA17_Chr3g0118231 37.802 455 251 10 474 911 209 648 5.14e-79 271
Msa0650080 MtrunA17_Chr1g0150261 23.506 502 322 9 448 932 1315 1771 8.24e-34 141
Msa0650080 MtrunA17_Chr4g0074091 23.729 472 297 10 447 906 744 1164 3.20e-29 126
Msa0650080 MtrunA17_Chr3g0091511 24.745 392 234 10 501 875 1579 1926 2.34e-27 120
Msa0650080 MtrunA17_Chr4g0061111 23.977 513 282 12 439 904 1091 1542 4.98e-25 112
Msa0650080 MtrunA17_Chr5g0409151 22.819 298 188 5 636 929 2 261 6.96e-18 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0650080 AT5G54650.2 62.400 500 161 7 466 957 420 900 0.0 607
Msa0650080 AT5G54650.1 62.400 500 161 7 466 957 420 900 0.0 607
Msa0650080 AT5G67470.1 46.970 462 194 9 472 910 420 853 1.04e-119 387
Msa0650080 AT3G05470.1 46.695 469 229 7 442 906 418 869 5.30e-118 382
Msa0650080 AT3G25500.1 46.429 476 228 10 441 905 532 991 2.63e-117 385
Msa0650080 AT2G43800.1 47.115 416 206 5 496 905 438 845 4.27e-112 367
Msa0650080 AT1G70140.1 40.798 451 236 10 479 911 283 720 1.33e-95 319
Msa0650080 AT1G59910.1 41.609 435 243 8 500 927 457 887 1.83e-89 306
Msa0650080 AT5G48360.1 39.418 378 180 9 537 907 447 782 3.35e-70 249
Msa0650080 AT3G07540.1 32.128 470 241 12 446 905 433 834 9.88e-45 174
Msa0650080 AT4G15200.2 54.774 199 72 5 441 638 281 462 8.17e-44 166
Msa0650080 AT4G15200.4 54.774 199 72 5 441 638 280 461 9.50e-44 166
Msa0650080 AT1G24150.2 38.768 276 155 5 443 712 252 519 2.32e-39 154
Msa0650080 AT5G07740.1 29.457 258 166 6 497 744 1238 1489 1.92e-29 127
Msa0650080 AT5G07740.3 29.457 258 166 6 497 744 1216 1467 2.03e-29 127
Msa0650080 AT5G58160.1 27.935 247 167 4 505 744 838 1080 2.33e-28 124
Msa0650080 AT1G31810.2 28.458 253 167 5 503 746 816 1063 6.00e-27 119
Msa0650080 AT1G31810.1 28.458 253 167 5 503 746 816 1063 6.00e-27 119
Msa0650080 AT5G07770.1 27.393 303 191 8 501 788 187 475 3.20e-26 115
Msa0650080 AT5G07770.3 27.393 303 191 8 501 788 194 482 3.92e-26 115
Msa0650080 AT5G07770.4 27.393 303 191 8 501 788 53 341 1.23e-25 113
Msa0650080 AT4G15200.3 49.080 163 65 5 441 602 281 426 5.28e-25 109
Msa0650080 AT5G07740.2 26.027 292 166 7 497 744 1238 1523 3.33e-24 110
Msa0650080 AT5G07770.2 27.046 281 177 7 523 788 181 448 9.56e-23 104
Msa0650080 AT2G25050.1 24.113 282 178 6 496 744 735 1013 3.09e-20 97.4
Msa0650080 AT3G32400.2 27.976 336 207 8 433 744 16 340 3.65e-19 92.4
Msa0650080 AT5G07760.1 25.114 219 154 3 572 788 523 733 3.68e-18 90.5
Msa0650080 AT5G07760.2 25.114 219 154 3 572 788 523 733 5.26e-18 90.1
Msa0650080 AT5G07780.1 27.273 176 125 2 572 744 144 319 1.22e-15 81.3
Msa0650080 AT5G07650.2 24.528 212 154 3 536 744 435 643 2.03e-15 81.6
Msa0650080 AT3G25493.1 38.372 86 51 1 822 905 28 113 5.72e-15 73.9
Msa0650080 AT3G32400.1 26.957 345 205 10 433 745 8 337 3.62e-13 73.6
Msa0650080 AT5G07650.1 22.881 236 152 4 536 744 435 667 3.45e-12 71.2

Find 294 sgRNAs with CRISPR-Local

Find 516 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGTCCACCATGGCTTTC+AGG 0.210313 4_3:-56832536 None:intergenic
CCAGATGGTGCTGGCGGTGG+TGG 0.231478 4_3:-56831679 None:intergenic
GCTGCTGGCGGTGTCAGTTT+TGG 0.240006 4_3:-56830837 None:intergenic
ACACGGCCTGGATTTCTTCT+AGG 0.243627 4_3:-56830627 None:intergenic
CTGCCTGGAGGAGGTCTTAA+AGG 0.243919 4_3:-56831352 None:intergenic
CCGCCTTCGTTTACACCTTT+TGG 0.247274 4_3:+56831397 Msa0650080:CDS
CAGTCATCAAGTAATAATTT+AGG 0.250746 4_3:+56831208 Msa0650080:CDS
GGTCCTTCCAATCATGCTTT+TGG 0.263432 4_3:+56831154 Msa0650080:intron
TCAGCATTCTCTGTAGCTTT+TGG 0.266889 4_3:-56831769 None:intergenic
AACCGTGGAACTGACTTTAT+TGG 0.291384 4_3:-56830424 None:intergenic
AAATATCAAGCACTTGTTAA+TGG 0.294166 4_3:+56828921 Msa0650080:exon
AGAGGAGCTCACTACTACTA+TGG 0.295866 4_3:+56832608 Msa0650080:CDS
AGCATGAATGACTATTCTTT+TGG 0.300414 4_3:+56831050 Msa0650080:CDS
TTCTGTAGTTATAACTATAT+CGG 0.301183 4_3:+56830938 Msa0650080:intron
TTCGGGCAATGGAGGGAGAC+TGG 0.301432 4_3:-56830733 None:intergenic
TATCGTCCTCAACATTCTTC+AGG 0.303241 4_3:-56833779 None:intergenic
CACAAGACCGTGGCCAAGTT+TGG 0.309150 4_3:-56833730 None:intergenic
TTGAAATTATCTGATGTAAA+AGG 0.312971 4_3:+56833462 Msa0650080:CDS
CAACTATTTGATTCAGCATC+TGG 0.315270 4_3:+56829060 Msa0650080:CDS
TGATGGGGATAGGCTGGGTT+CGG 0.317278 4_3:-56830751 None:intergenic
CTTGAAGCTGTTCTCAAAAC+TGG 0.318506 4_3:+56833378 Msa0650080:CDS
TGGATTTCTTCTAGGAATAC+TGG 0.328042 4_3:-56830619 None:intergenic
GACTGCAGGCAAAGGTATTT+AGG 0.334509 4_3:+56830316 Msa0650080:intron
CGTATTTCCAAAAGCATGAT+TGG 0.340689 4_3:-56831161 None:intergenic
AGCGGGTGATGGGGATAGGC+TGG 0.346901 4_3:-56830757 None:intergenic
GATGGTGCTGGCGGTGGTGG+GGG 0.347519 4_3:-56831676 None:intergenic
ATTCAAATCAATCAATGGTT+TGG 0.349734 4_3:+56831866 Msa0650080:CDS
TATATTGAGGTGAAGGGTCT+TGG 0.350584 4_3:-56832089 None:intergenic
GTTTGGTATGAGAGAGATAG+AGG 0.356625 4_3:-56828294 None:intergenic
TGGATATCTGCTTGAGCAAC+TGG 0.357353 4_3:-56830450 None:intergenic
GAAATGTCAGGTTGCTTGTA+AGG 0.359972 4_3:+56833323 Msa0650080:intron
GGTTTGGCACCAGGTGGTGC+AGG 0.360892 4_3:-56831643 None:intergenic
CAGATGGTGCTGGCGGTGGT+GGG 0.363070 4_3:-56831678 None:intergenic
GGAGGAGCTCCACCACTCTT+AGG 0.365419 4_3:-56831736 None:intergenic
TAGGGTTGTTTGTTTCTTGA+GGG 0.367082 4_3:+56828566 Msa0650080:five_prime_UTR
AATATCAAGCACTTGTTAAT+GGG 0.367085 4_3:+56828922 Msa0650080:exon
AGGCTGGGTTCGGGCAATGG+AGG 0.376157 4_3:-56830741 None:intergenic
TTTGAGACGGTCACTTTCAC+AGG 0.376582 4_3:+56834422 Msa0650080:three_prime_UTR
TTGGCACCAGGTGGTGCAGG+GGG 0.379963 4_3:-56831640 None:intergenic
GATGGGGATAGGCTGGGTTC+GGG 0.380378 4_3:-56830750 None:intergenic
GGTTTGGCACCAAGTGGTGC+AGG 0.381434 4_3:-56831598 None:intergenic
AAAGGAGGAGAAAGAGGATT+AGG 0.385320 4_3:-56830795 None:intergenic
GATAGGCTGGGTTCGGGCAA+TGG 0.393581 4_3:-56830744 None:intergenic
AAGAATGTTGAGGACGATAG+AGG 0.394680 4_3:+56833783 Msa0650080:CDS
ATTGATTGATTTGAATTAGC+TGG 0.395298 4_3:-56831859 None:intergenic
CTCCTACTGGAATTGTTTGC+CGG 0.397227 4_3:+56830399 Msa0650080:CDS
TTGGCACCAAGTGGTGCAGG+GGG 0.398419 4_3:-56831595 None:intergenic
CCTTCAAACCTTGTTGAAGA+TGG 0.399631 4_3:+56832437 Msa0650080:CDS
CTCCATCTTCTGACACGAAC+GGG 0.400615 4_3:+56830877 Msa0650080:CDS
CTGGAGCGGGTGATGGGGAT+AGG 0.402711 4_3:-56830761 None:intergenic
CTTAGTGACGAAGGGATTGT+AGG 0.408617 4_3:+56828855 Msa0650080:five_prime_UTR
AGAGTGGGAACTATCCATTC+TGG 0.408801 4_3:+56831322 Msa0650080:CDS
CAATAGAAAGATTCAACAAA+AGG 0.409696 4_3:-56828518 None:intergenic
AGGTGAAGGGTCTTGGGAGG+AGG 0.412105 4_3:-56832082 None:intergenic
ACTACGCGTAAGCCTTTGTT+TGG 0.412480 4_3:-56828311 None:intergenic
AGATGGTGCTGGCGGTGGTG+GGG 0.413538 4_3:-56831677 None:intergenic
ATTAGTGACATGCCATATCT+TGG 0.415267 4_3:-56830574 None:intergenic
AGCTAATTCAAATCAATCAA+TGG 0.415501 4_3:+56831861 Msa0650080:CDS
AATGGGAATTGAGAGATATA+TGG 0.422327 4_3:+56828939 Msa0650080:exon
ATATTGAGGTGAAGGGTCTT+GGG 0.422759 4_3:-56832088 None:intergenic
CAGGTGATGGTGTGAGACTC+GGG 0.429829 4_3:-56830707 None:intergenic
GAACAGCTTCAAGAAGTTTG+TGG 0.430295 4_3:-56833368 None:intergenic
GTAGGGTTGTTTGTTTCTTG+AGG 0.430635 4_3:+56828565 Msa0650080:five_prime_UTR
CCATTTCCAACTTGAACCTA+TGG 0.432578 4_3:-56834167 None:intergenic
TTTGGCACCAGGTGGTGCAG+GGG 0.433099 4_3:-56831641 None:intergenic
GTTTGGAATCAGATCAAATC+AGG 0.434148 4_3:+56831883 Msa0650080:CDS
GTTTGAAACTTTGTTGAAGA+GGG 0.435081 4_3:+56828690 Msa0650080:five_prime_UTR
AAGGACCAAAAGGAAAGAAA+AGG 0.435175 4_3:-56828377 None:intergenic
GGAGGACCGGGTTTGGCACC+AGG 0.435572 4_3:-56831652 None:intergenic
GAGGCGCTGGAGCGGGTGAT+GGG 0.437847 4_3:-56830767 None:intergenic
GTTTGGCACCAGGTGGTGCA+GGG 0.438893 4_3:-56831642 None:intergenic
GGGAGACTGGGTTCAGGTGA+TGG 0.438984 4_3:-56830720 None:intergenic
GCAGAAATGTCTGCAGCTGC+TGG 0.440090 4_3:-56830852 None:intergenic
GATATGGCATGTCACTAATA+CGG 0.440424 4_3:+56830578 Msa0650080:CDS
CTCCTTCTGCCGTTGACCAT+TGG 0.440769 4_3:-56832055 None:intergenic
AGAGGCGCTGGAGCGGGTGA+TGG 0.442056 4_3:-56830768 None:intergenic
TCAGGTGATGGTGTGAGACT+CGG 0.442832 4_3:-56830708 None:intergenic
GGTTTGGCACCAGGTGGAGC+AGG 0.448523 4_3:-56831559 None:intergenic
TTCCCGTTCGTGTCAGAAGA+TGG 0.449953 4_3:-56830879 None:intergenic
AATGCTGGATAAAGTATGTA+AGG 0.452129 4_3:+56833980 Msa0650080:CDS
ACAGCAACTGCTGCCAAACT+TGG 0.453608 4_3:+56833717 Msa0650080:CDS
TGTGGTGGTGAAGGAGTAGT+AGG 0.455412 4_3:-56831487 None:intergenic
AGTGGAGGGCGAGGAGGAAC+AGG 0.456131 4_3:-56831532 None:intergenic
TCTTGATTAGAAATCCTTTG+TGG 0.458503 4_3:+56828762 Msa0650080:five_prime_UTR
AGTTAGCTCCATAGAAAAGA+AGG 0.459170 4_3:+56829014 Msa0650080:CDS
CCATAGGTTCAAGTTGGAAA+TGG 0.459344 4_3:+56834167 Msa0650080:exon
GCAGGGTGTAGTGGAGGGCG+AGG 0.460761 4_3:-56831541 None:intergenic
GGAGGAGGTGGACGAGGACC+AGG 0.461446 4_3:-56831709 None:intergenic
TCATGATTTATGCCTCCTAC+TGG 0.461588 4_3:+56830386 Msa0650080:CDS
CCTCCTCCTCCTCGACAGTC+TGG 0.462302 4_3:+56831445 Msa0650080:CDS
AGGGCGAGGAGGAACAGGTT+TGG 0.462316 4_3:-56831527 None:intergenic
CCACCACCGCCAGCACCATC+TGG 0.462467 4_3:+56831679 Msa0650080:CDS
TCTTTCTCCTCCTTTGTCAC+CGG 0.463623 4_3:+56830803 Msa0650080:CDS
CTTGATTAGAAATCCTTTGT+GGG 0.464853 4_3:+56828763 Msa0650080:five_prime_UTR
GGATTAGGAAGTAGAGGCGC+TGG 0.465467 4_3:-56830780 None:intergenic
AGAAAGATTTCCTTGATTTG+AGG 0.468963 4_3:-56830495 None:intergenic
ATAATTCTTGTGTTCTGCTA+AGG 0.469514 4_3:+56828792 Msa0650080:five_prime_UTR
AATGGCGATCTGTCTCAACT+TGG 0.469986 4_3:+56832498 Msa0650080:CDS
CCAGGTGGAGCAGGGTGTAG+TGG 0.470247 4_3:-56831550 None:intergenic
TATGCTTTCGTAAGGCTGGC+CGG 0.471391 4_3:+56830991 Msa0650080:CDS
CCACTACACCCTGCTCCACC+TGG 0.471440 4_3:+56831550 Msa0650080:CDS
AAGAGGATGATTCCAAGATA+TGG 0.473310 4_3:+56830562 Msa0650080:CDS
AGCTGGAGCAAAACACGGCC+TGG 0.476378 4_3:-56830639 None:intergenic
GGAGGAGGAGGAGGTGGACG+AGG 0.476559 4_3:-56831715 None:intergenic
GAGCTTGCTAATGTTAAAAG+AGG 0.476648 4_3:+56833669 Msa0650080:CDS
GGAGGACTAGGTTTGGCACC+AGG 0.477585 4_3:-56831568 None:intergenic
CCATCTTCAACAAGGTTTGA+AGG 0.481397 4_3:-56832437 None:intergenic
GGAGGAGGATTCAATTCAAA+TGG 0.482443 4_3:-56831295 None:intergenic
GGGGTAGGTGATCCAACTGC+GGG 0.483728 4_3:-56830687 None:intergenic
AATGGAGGGAGACTGGGTTC+AGG 0.483769 4_3:-56830726 None:intergenic
ATCCTCCTTTCAGCTATAGC+TGG 0.485588 4_3:-56834116 None:intergenic
GGGTGGTGGAGGACTAGGTT+TGG 0.487566 4_3:-56831575 None:intergenic
GGAACTGACTTTATTGGTGC+CGG 0.488689 4_3:-56830418 None:intergenic
TTTGAATTGAATCCTCCTCC+TGG 0.489661 4_3:+56831298 Msa0650080:CDS
TGAGAAGAAAATCATGGCTC+TGG 0.489915 4_3:+56833872 Msa0650080:CDS
AAGAGACTTCTTGATAATGC+TGG 0.489977 4_3:+56833965 Msa0650080:CDS
GGGAATGCTGCGAAGGATGA+TGG 0.490591 4_3:+56833921 Msa0650080:CDS
AGCACGGGCGATTACTTTCA+CGG 0.491716 4_3:+56833900 Msa0650080:CDS
CCACCATGGCTTTCAGGAAA+CGG 0.491880 4_3:-56832530 None:intergenic
AGAAGGTGATGGGCGTGTAT+CGG 0.493216 4_3:-56834072 None:intergenic
GCACCAGATGGTGCTGGCGG+TGG 0.493511 4_3:-56831682 None:intergenic
TCCCTCTGCGTTTAAGCGAA+TGG 0.494568 4_3:+56832557 Msa0650080:CDS
GTTTGGCACCAAGTGGTGCA+GGG 0.494911 4_3:-56831597 None:intergenic
GGAAGTAGAGGCGCTGGAGC+GGG 0.496495 4_3:-56830774 None:intergenic
GTGTAAACGAAGGCGGCTCA+TGG 0.497349 4_3:-56831390 None:intergenic
ATCTGGATATATTGAGGTGA+AGG 0.497544 4_3:-56832096 None:intergenic
AAGTTTGTCTAATATTAAAA+CGG 0.498224 4_3:+56833578 Msa0650080:CDS
AATAAAATCTTCACAGCAAG+TGG 0.502155 4_3:-56830340 None:intergenic
AGGCGCTGGAGCGGGTGATG+GGG 0.502861 4_3:-56830766 None:intergenic
GCGGGTGATGGGGATAGGCT+GGG 0.507685 4_3:-56830756 None:intergenic
GCACCACTTGGTGCCAAACC+CGG 0.507883 4_3:+56831601 Msa0650080:CDS
CAAGAAGTTTGTGGAACAGC+CGG 0.508507 4_3:-56833359 None:intergenic
GTACAGACATGGCTGGAGGC+TGG 0.509191 4_3:+56834359 Msa0650080:three_prime_UTR
GGAAGAGGATTCATCCTGCC+TGG 0.509754 4_3:-56831367 None:intergenic
TCGACGATCTGGATATATTG+AGG 0.513039 4_3:-56832102 None:intergenic
AGCAGTTGCTGTTAAGCTGT+CGG 0.513377 4_3:-56833706 None:intergenic
CAAGACCAAGCTCGCGATAG+TGG 0.515198 4_3:-56833623 None:intergenic
GCTTTCAGGAAACGGTCAGC+AGG 0.515256 4_3:-56832522 None:intergenic
AATAGAAAGATTCAACAAAA+GGG 0.516514 4_3:-56828517 None:intergenic
GGTATGTTCCATCGTTCATA+CGG 0.518763 4_3:-56833404 None:intergenic
ACGACAAAAGGGGAGAAGCT+TGG 0.521530 4_3:+56831181 Msa0650080:CDS
TGTAAACGAAGGCGGCTCAT+GGG 0.522295 4_3:-56831389 None:intergenic
GGATTCATCCTGCCTGGAGG+AGG 0.523494 4_3:-56831361 None:intergenic
TCTTCTAGGAATACTGGATG+TGG 0.524707 4_3:-56830613 None:intergenic
GCACCACCTGGTGCCAAACC+CGG 0.528215 4_3:+56831646 Msa0650080:CDS
CCACCACTCTTAGGAGGAGG+AGG 0.528417 4_3:-56831727 None:intergenic
TTTCACAGGGATAGTTGTGT+AGG 0.529624 4_3:+56834436 Msa0650080:three_prime_UTR
TTAGTGACGAAGGGATTGTA+GGG 0.530407 4_3:+56828856 Msa0650080:five_prime_UTR
TCGCGAGCTTGGTCTTGAGA+TGG 0.530563 4_3:+56833629 Msa0650080:CDS
GAAGACCACTATCGCGAGCT+TGG 0.531023 4_3:+56833618 Msa0650080:CDS
GCACCATCTGGTGCTAAACC+TGG 0.531028 4_3:+56831691 Msa0650080:CDS
TCGGGCAATGGAGGGAGACT+GGG 0.531046 4_3:-56830732 None:intergenic
AATGCTGAAGCAGGTGCAGA+AGG 0.533724 4_3:+56831784 Msa0650080:CDS
GTGGAGCAGGGTGTAGTGGA+GGG 0.533864 4_3:-56831546 None:intergenic
ACACCAGACTGTCGAGGAGG+AGG 0.533874 4_3:-56831448 None:intergenic
TTTGGCACCAAGTGGTGCAG+GGG 0.533875 4_3:-56831596 None:intergenic
AGGAAGTAGAGGCGCTGGAG+CGG 0.535058 4_3:-56830775 None:intergenic
ATATGGCATGTCACTAATAC+GGG 0.535067 4_3:+56830579 Msa0650080:CDS
CAGGTGGTTCTGATATGAGC+TGG 0.536634 4_3:-56830656 None:intergenic
GGTGGAGCAGGGTGTAGTGG+AGG 0.537361 4_3:-56831547 None:intergenic
TCCATTCGCTTAAACGCAGA+GGG 0.538295 4_3:-56832558 None:intergenic
TTGTGTTTCTTAGTGACGAA+GGG 0.538402 4_3:+56828847 Msa0650080:five_prime_UTR
TGACGAAAATCAGAAGGTGA+TGG 0.540226 4_3:-56834083 None:intergenic
TGCTTGCCATCCTCAAATCA+AGG 0.540431 4_3:+56830485 Msa0650080:CDS
GCTACAGAGAATGCTGAAGC+AGG 0.540879 4_3:+56831775 Msa0650080:CDS
GGCTGGGTTCGGGCAATGGA+GGG 0.542357 4_3:-56830740 None:intergenic
GAATCCTCCTCCTGGGAGAG+TGG 0.544001 4_3:+56831306 Msa0650080:CDS
GTTTGTGATGCACTTTATGA+AGG 0.544465 4_3:+56832186 Msa0650080:CDS
ATGGCTCTGGTGAAGAGCAC+GGG 0.545130 4_3:+56833885 Msa0650080:CDS
CTTTCACGGGAATGCTGCGA+AGG 0.546173 4_3:+56833914 Msa0650080:CDS
GGTTTAGCACCAGATGGTGC+TGG 0.548821 4_3:-56831688 None:intergenic
GGGTGTAGTGGAGGGCGAGG+AGG 0.548938 4_3:-56831538 None:intergenic
TGGATAGTTCCCACTCTCCC+AGG 0.550191 4_3:-56831316 None:intergenic
CCTGGTTTAGGCCCCGCAGT+TGG 0.550746 4_3:+56830675 Msa0650080:intron
GTTTGGCACCAGGTGGAGCA+GGG 0.551572 4_3:-56831558 None:intergenic
TGAAGATGAGAAGAAAATCA+TGG 0.553044 4_3:+56833866 Msa0650080:CDS
ATGGCGATCTGTCTCAACTT+GGG 0.553072 4_3:+56832499 Msa0650080:CDS
CTTTAAGACCTCCTCCAGGC+AGG 0.553261 4_3:+56831353 Msa0650080:CDS
AGATTTCCTTGATTTGAGGA+TGG 0.553854 4_3:-56830491 None:intergenic
GAAGGCGGCTCATGGGGAAG+AGG 0.554110 4_3:-56831382 None:intergenic
CCTCCTCCTCCTAAGAGTGG+TGG 0.555072 4_3:+56831727 Msa0650080:CDS
TTGAATTGAATCCTCCTCCT+GGG 0.557209 4_3:+56831299 Msa0650080:CDS
GACGAAAATCAGAAGGTGAT+GGG 0.557273 4_3:-56834082 None:intergenic
AGGACCAAAAGGAAAGAAAA+GGG 0.557395 4_3:-56828376 None:intergenic
GGTGACAAAGGAGGAGAAAG+AGG 0.557438 4_3:-56830801 None:intergenic
GAGACGACAGTATTACCAAA+AGG 0.558989 4_3:-56831412 None:intergenic
ATTACATGTCTTAGGCAAAG+AGG 0.561567 4_3:+56830545 Msa0650080:intron
CAAGAGATTATCCGCTCTGA+GGG 0.561932 4_3:+56833522 Msa0650080:CDS
CATGGCTCTGGTGAAGAGCA+CGG 0.562048 4_3:+56833884 Msa0650080:CDS
GAGATATGTACAGACATGGC+TGG 0.562068 4_3:+56834352 Msa0650080:three_prime_UTR
TTAAGTTCTTCGTCTGATGT+CGG 0.563214 4_3:-56832462 None:intergenic
CCACTCTTAGGAGGAGGAGG+AGG 0.563379 4_3:-56831724 None:intergenic
GTTCCCACTCTCCCAGGAGG+AGG 0.563679 4_3:-56831310 None:intergenic
AGTATTCCTAGAAGAAATCC+AGG 0.564318 4_3:+56830621 Msa0650080:CDS
TTCACAGGGATAGTTGTGTA+GGG 0.564925 4_3:+56834437 Msa0650080:three_prime_UTR
CCACCACAATCAATACTAGC+TGG 0.565760 4_3:+56831502 Msa0650080:CDS
AGTTTGAAACTTTGTTGAAG+AGG 0.566719 4_3:+56828689 Msa0650080:five_prime_UTR
TGTTGTACGAAAGGACCAAA+AGG 0.566975 4_3:-56828387 None:intergenic
AATCCTCCTCCTGGGAGAGT+GGG 0.569029 4_3:+56831307 Msa0650080:CDS
CCAGACTGTCGAGGAGGAGG+AGG 0.569086 4_3:-56831445 None:intergenic
ATTCATGCTCAAGCTGAGCA+AGG 0.569881 4_3:-56831036 None:intergenic
GAAAGAGGATTAGGAAGTAG+AGG 0.570279 4_3:-56830786 None:intergenic
GCACGGGCGATTACTTTCAC+GGG 0.572404 4_3:+56833901 Msa0650080:CDS
GTAAGGAACTAAGAAACAGC+CGG 0.573002 4_3:+56833340 Msa0650080:CDS
GAAATGTCTGCAGCTGCTGG+CGG 0.574329 4_3:-56830849 None:intergenic
ATTGTGTTTCTTAGTGACGA+AGG 0.575596 4_3:+56828846 Msa0650080:five_prime_UTR
GAGAGTCCATAGGTTCAAGT+TGG 0.576884 4_3:+56834161 Msa0650080:exon
GCTCCACCACTCTTAGGAGG+AGG 0.581787 4_3:-56831730 None:intergenic
CCTCCATCTTCTGACACGAA+CGG 0.582016 4_3:+56830876 Msa0650080:CDS
AAGGAATTGAAGTGGGTTCG+TGG 0.583394 4_3:+56828811 Msa0650080:five_prime_UTR
CGGGGTAGGTGATCCAACTG+CGG 0.584611 4_3:-56830688 None:intergenic
CTGCAAGGAAATCAATCGAT+GGG 0.586296 4_3:+56831250 Msa0650080:CDS
AGAATGTTGAGGACGATAGA+GGG 0.587583 4_3:+56833784 Msa0650080:CDS
AGTATTGATTGTGGTGGTGA+AGG 0.589299 4_3:-56831496 None:intergenic
TTTCCAAAAGCATGATTGGA+AGG 0.590426 4_3:-56831157 None:intergenic
GTCCAATGGTCAACGGCAGA+AGG 0.591750 4_3:+56832053 Msa0650080:CDS
TTGAGGTGAAGGGTCTTGGG+AGG 0.592444 4_3:-56832085 None:intergenic
GCACCAGCTAGTATTGATTG+TGG 0.593120 4_3:-56831505 None:intergenic
TTCATGCTCAAGCTGAGCAA+GGG 0.593596 4_3:-56831035 None:intergenic
GAAAAGAAGGAAACACAAGA+TGG 0.594013 4_3:+56829027 Msa0650080:CDS
TTCAGACGAGGAGAGTCCAT+AGG 0.595433 4_3:+56834151 Msa0650080:CDS
AACAAGAAGACCTCACTGCA+AGG 0.596038 4_3:+56831235 Msa0650080:CDS
ACTGCTGCCAAACTTGGCCA+CGG 0.599565 4_3:+56833723 Msa0650080:CDS
TTAAAGGTGGCATTCCAGAA+TGG 0.600135 4_3:-56831336 None:intergenic
GGAGCTCCACCACTCTTAGG+AGG 0.601332 4_3:-56831733 None:intergenic
GGTGGTGAAGGAGTAGTAGG+AGG 0.601605 4_3:-56831484 None:intergenic
ACTGCAAGGAAATCAATCGA+TGG 0.603881 4_3:+56831249 Msa0650080:CDS
GTAAACGAAGGCGGCTCATG+GGG 0.604293 4_3:-56831388 None:intergenic
ATCTTCTGACACGAACGGGA+AGG 0.605783 4_3:+56830881 Msa0650080:CDS
GCTGAAGCAGGTGCAGAAGG+TGG 0.605872 4_3:+56831787 Msa0650080:CDS
TCATACCTCTAAAACTGCAA+AGG 0.606128 4_3:-56832634 None:intergenic
TTCCAGCTATAGCTGAAAGG+AGG 0.608360 4_3:+56834114 Msa0650080:CDS
TAGAGACCGTGTTGTACGAA+AGG 0.608510 4_3:-56828396 None:intergenic
TTCTGCTAAGGAATTGAAGT+GGG 0.610601 4_3:+56828804 Msa0650080:five_prime_UTR
CGGCAAACAATTCCAGTAGG+AGG 0.613272 4_3:-56830398 None:intergenic
CCACCTTTAAGACCTCCTCC+AGG 0.613829 4_3:+56831349 Msa0650080:CDS
TGACCGTTTCCTGAAAGCCA+TGG 0.615549 4_3:+56832527 Msa0650080:CDS
GGCTTAGACAAAATGATGAG+AGG 0.615592 4_3:+56831012 Msa0650080:CDS
TCTGGATATATTGAGGTGAA+GGG 0.618913 4_3:-56832095 None:intergenic
AGCCGCTGACGAAAATCAGA+AGG 0.621884 4_3:-56834089 None:intergenic
ACTGGTAACCGTATGAACGA+TGG 0.628161 4_3:+56833396 Msa0650080:CDS
TCTGATGTAAAAGGAACAGA+CGG 0.628502 4_3:+56833471 Msa0650080:CDS
CCGTTTCCTGAAAGCCATGG+TGG 0.628940 4_3:+56832530 Msa0650080:CDS
CAGCTCATATCAGAACCACC+TGG 0.629581 4_3:+56830657 Msa0650080:CDS
AATGAGGCCGGTGACAAAGG+AGG 0.630045 4_3:-56830810 None:intergenic
GAATTGAAGTGGGTTCGTGG+TGG 0.632060 4_3:+56828814 Msa0650080:five_prime_UTR
TTCCATTCGCTTAAACGCAG+AGG 0.632346 4_3:-56832559 None:intergenic
CGATTGATTTCCTTGCAGTG+AGG 0.632581 4_3:-56831245 None:intergenic
AATGCTGTGAATAAGTCCAA+TGG 0.632825 4_3:+56832039 Msa0650080:CDS
TTTGGTCCTTTCGTACAACA+CGG 0.633107 4_3:+56828390 Msa0650080:five_prime_UTR
AAAGGGTATTTGCGTCAATG+AGG 0.634483 4_3:-56828500 None:intergenic
TCAAGAGATTATCCGCTCTG+AGG 0.635223 4_3:+56833521 Msa0650080:CDS
GGGCGTGTATCGGACGAAGA+CGG 0.635897 4_3:-56834062 None:intergenic
ATATGAGCTGGAGCAAAACA+CGG 0.635980 4_3:-56830644 None:intergenic
TGTCGGTGCCATCTTCAACA+AGG 0.636676 4_3:-56832445 None:intergenic
GGGCATAAAAGCTGCTCGAG+CGG 0.637404 4_3:+56833542 Msa0650080:CDS
TGAATAAGTCCAATGGTCAA+CGG 0.639520 4_3:+56832046 Msa0650080:CDS
GGACCGGGTTTGGCACCAGG+TGG 0.640127 4_3:-56831649 None:intergenic
ATCAGGAAATGAGCTACCGT+CGG 0.641710 4_3:+56832410 Msa0650080:intron
ATCTCTCTCATACCAAACAA+AGG 0.643517 4_3:+56828299 Msa0650080:five_prime_UTR
CCTGGAGGAGGTCTTAAAGG+TGG 0.645739 4_3:-56831349 None:intergenic
CACCAATAAAGTCAGTTCCA+CGG 0.646082 4_3:+56830422 Msa0650080:CDS
GATGGTGTGAGACTCGGGGT+AGG 0.649770 4_3:-56830702 None:intergenic
GGACTAGGTTTGGCACCAGG+TGG 0.652043 4_3:-56831565 None:intergenic
AAGGTTTGAAGGAATTCCGA+CGG 0.652817 4_3:-56832426 None:intergenic
GGACCAGGTTTAGCACCAGA+TGG 0.653890 4_3:-56831694 None:intergenic
TTAGCACCAGATGGTGCTGG+CGG 0.655065 4_3:-56831685 None:intergenic
CCAAAAGGTGTAAACGAAGG+CGG 0.656548 4_3:-56831397 None:intergenic
AGGTGATGGTGTGAGACTCG+GGG 0.658138 4_3:-56830706 None:intergenic
GGACCGGGTTTGGCACCAAG+TGG 0.661371 4_3:-56831604 None:intergenic
AGATTATGTTAGTTCAGACG+AGG 0.662395 4_3:+56834139 Msa0650080:CDS
GAATTATACAAAACCCACAA+AGG 0.663309 4_3:-56828776 None:intergenic
CTAGCAACACCAGACTGTCG+AGG 0.667233 4_3:-56831454 None:intergenic
CTTTGGCTTTCACAAGACCG+TGG 0.668586 4_3:-56833740 None:intergenic
TTGAGACGGTCACTTTCACA+GGG 0.672518 4_3:+56834423 Msa0650080:three_prime_UTR
AAATGAGATATGTACAGACA+TGG 0.673490 4_3:+56834348 Msa0650080:three_prime_UTR
CCGTTCGTGTCAGAAGATGG+AGG 0.676411 4_3:-56830876 None:intergenic
TAAATGCTTGTGCACCACCA+CGG 0.677817 4_3:-56833425 None:intergenic
GGGTAGGTGATCCAACTGCG+GGG 0.687109 4_3:-56830686 None:intergenic
CGCAGAGGGAATGTCCACCA+TGG 0.687791 4_3:-56832544 None:intergenic
CCAGCTAGTATTGATTGTGG+TGG 0.688825 4_3:-56831502 None:intergenic
GTTCTGCTAAGGAATTGAAG+TGG 0.692103 4_3:+56828803 Msa0650080:five_prime_UTR
TTGAGCAACTGGTCGAACCG+TGG 0.697702 4_3:-56830439 None:intergenic
AGAGGATTCATCCTGCCTGG+AGG 0.702096 4_3:-56831364 None:intergenic
GCAACACCAGACTGTCGAGG+AGG 0.702662 4_3:-56831451 None:intergenic
ATGAACGATGGAACATACCG+TGG 0.706065 4_3:+56833408 Msa0650080:CDS
TGCCGGCAAACAATTCCAGT+AGG 0.707174 4_3:-56830401 None:intergenic
GCGCGCATTGAACGTGACGA+TGG 0.709406 4_3:+56832158 Msa0650080:CDS
TTACCAAAAGGTGTAAACGA+AGG 0.710378 4_3:-56831400 None:intergenic
TGGATTGTTAGATGAGCACA+CGG 0.712269 4_3:+56829080 Msa0650080:CDS
ATAGTTCCCACTCTCCCAGG+AGG 0.719091 4_3:-56831313 None:intergenic
ATATGTACAGACATGGCTGG+AGG 0.743127 4_3:+56834355 Msa0650080:three_prime_UTR
AACGATGGAACATACCGTGG+TGG 0.745719 4_3:+56833411 Msa0650080:CDS
ATAAAACAAGAAACTTCACG+AGG 0.777985 4_3:+56834038 Msa0650080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTAGATTAAAGTTT+AGG + chr4_3:56829341-56829360 Msa0650080:intron 10.0%
!! ACTGAATAAAAATAATAGTT+TGG + chr4_3:56829240-56829259 Msa0650080:intron 15.0%
!! TTTAATCTAAAAAAAATAGC+TGG - chr4_3:56829337-56829356 None:intergenic 15.0%
!! TAGATTTAATATGAATAACA+TGG - chr4_3:56829573-56829592 None:intergenic 15.0%
!! ACATGTAAAAAATTAATTAC+TGG - chr4_3:56829971-56829990 None:intergenic 15.0%
!!! TTTTATTCATTTAAAGAAAG+AGG + chr4_3:56830356-56830375 Msa0650080:CDS 15.0%
!!! AACAAAATAATTTTTGGATT+TGG - chr4_3:56831925-56831944 None:intergenic 15.0%
!! ATTTAGAAGCAAAATTATTT+AGG + chr4_3:56832339-56832358 Msa0650080:intron 15.0%
!!! TTTTAATATTAGACAAACTT+TGG - chr4_3:56833578-56833597 None:intergenic 15.0%
!! AAGTTTGTCTAATATTAAAA+CGG + chr4_3:56833578-56833597 Msa0650080:CDS 15.0%
!! AATAGAAAGATTCAACAAAA+GGG - chr4_3:56828520-56828539 None:intergenic 20.0%
!!! ACTTTGTATTTTACATTTGT+AGG + chr4_3:56828547-56828566 Msa0650080:five_prime_UTR 20.0%
!!! CTTTGTATTTTACATTTGTA+GGG + chr4_3:56828548-56828567 Msa0650080:five_prime_UTR 20.0%
!! AAAAACAAAAAGTAACAAGA+GGG - chr4_3:56828618-56828637 None:intergenic 20.0%
!! AAAAAACAAAAAGTAACAAG+AGG - chr4_3:56828619-56828638 None:intergenic 20.0%
!!! GTTTTTTTCATTGTTATTTC+TGG + chr4_3:56828632-56828651 Msa0650080:five_prime_UTR 20.0%
!! AATTTGGAAGTTAGAAAATT+AGG + chr4_3:56829203-56829222 Msa0650080:intron 20.0%
!! ATTTGGAAGTTAGAAAATTA+GGG + chr4_3:56829204-56829223 Msa0650080:intron 20.0%
!! AAACTAATATAACTGTATAC+GGG - chr4_3:56829616-56829635 None:intergenic 20.0%
!! CAAACTAATATAACTGTATA+CGG - chr4_3:56829617-56829636 None:intergenic 20.0%
!!! ACTATTTTCATGTGAAAAAA+TGG + chr4_3:56829707-56829726 Msa0650080:intron 20.0%
!!! GTTTAGTTTATAATGCTATT+TGG + chr4_3:56829911-56829930 Msa0650080:intron 20.0%
!! TTCTGTAGTTATAACTATAT+CGG + chr4_3:56830938-56830957 Msa0650080:intron 20.0%
!!! ATGCTCAACAAAATAATTTT+TGG - chr4_3:56831931-56831950 None:intergenic 20.0%
!!! AAAAATTATTTTGTTGAGCA+TGG + chr4_3:56831930-56831949 Msa0650080:intron 20.0%
!!! TTTTATGTGTACATTTAAAG+AGG + chr4_3:56832590-56832609 Msa0650080:CDS 20.0%
!! AATATACTTACACAAAAACA+GGG + chr4_3:56832779-56832798 Msa0650080:intron 20.0%
!! AATAATAAGTGTCAATTTAG+TGG - chr4_3:56832891-56832910 None:intergenic 20.0%
!!! ACATTGTAAATCAGTTTTAA+TGG + chr4_3:56833221-56833240 Msa0650080:intron 20.0%
!!! TATAATTCATTTGAAATGTC+AGG + chr4_3:56833311-56833330 Msa0650080:intron 20.0%
!! TTGAAATTATCTGATGTAAA+AGG + chr4_3:56833462-56833481 Msa0650080:CDS 20.0%
!!! GTTTTTGTTTAGTATATCTT+TGG - chr4_3:56833760-56833779 None:intergenic 20.0%
!!! TTTTTTAACTTATTTTGCAG+AGG + chr4_3:56834261-56834280 Msa0650080:intron 20.0%
!!! TTTTTAACTTATTTTGCAGA+GGG + chr4_3:56834262-56834281 Msa0650080:intron 20.0%
!!! TACACATTTTTCTTGATAAA+TGG + chr4_3:56834292-56834311 Msa0650080:three_prime_UTR 20.0%
!!! ACAAATACTACTTGTTTTTG+TGG + chr4_3:56828462-56828481 Msa0650080:five_prime_UTR 25.0%
! CAATAGAAAGATTCAACAAA+AGG - chr4_3:56828521-56828540 None:intergenic 25.0%
!!! TTTTTCATTGTTATTTCTGG+TGG + chr4_3:56828635-56828654 Msa0650080:five_prime_UTR 25.0%
!!! TTTTCATTGTTATTTCTGGT+GGG + chr4_3:56828636-56828655 Msa0650080:five_prime_UTR 25.0%
!! AAATATCAAGCACTTGTTAA+TGG + chr4_3:56828921-56828940 Msa0650080:exon 25.0%
!! AATATCAAGCACTTGTTAAT+GGG + chr4_3:56828922-56828941 Msa0650080:exon 25.0%
! AAGTTGAAATGACAAAAAAG+CGG + chr4_3:56829170-56829189 Msa0650080:intron 25.0%
! TTTGGAAGTTAGAAAATTAG+GGG + chr4_3:56829205-56829224 Msa0650080:intron 25.0%
!! ATTTGATAAATTTTCCTGAC+TGG - chr4_3:56829545-56829564 None:intergenic 25.0%
! CAGGAAAATTTATCAAATAG+AGG + chr4_3:56829547-56829566 Msa0650080:intron 25.0%
! ATGTGAAAAAATGGTTTAGA+CGG + chr4_3:56829716-56829735 Msa0650080:intron 25.0%
! GTTAAGATACTCAGAAAATT+AGG - chr4_3:56829864-56829883 None:intergenic 25.0%
! TTACATGTTCTATATTGACA+TGG + chr4_3:56829983-56830002 Msa0650080:intron 25.0%
! TACATGTTCTATATTGACAT+GGG + chr4_3:56829984-56830003 Msa0650080:intron 25.0%
! TTCTTATGTAATTGTTGCTA+AGG + chr4_3:56830159-56830178 Msa0650080:intron 25.0%
!! GAATTCATTGATTGAAACAA+TGG - chr4_3:56830269-56830288 None:intergenic 25.0%
! AATCTTCTATTACATGTCTT+AGG + chr4_3:56830537-56830556 Msa0650080:intron 25.0%
!!! CAACTGTTGTTTTATTACTA+TGG - chr4_3:56830914-56830933 None:intergenic 25.0%
! CAGTCATCAAGTAATAATTT+AGG + chr4_3:56831208-56831227 Msa0650080:CDS 25.0%
!!! ATTGATTGATTTGAATTAGC+TGG - chr4_3:56831862-56831881 None:intergenic 25.0%
! AGCTAATTCAAATCAATCAA+TGG + chr4_3:56831861-56831880 Msa0650080:CDS 25.0%
! ATTCAAATCAATCAATGGTT+TGG + chr4_3:56831866-56831885 Msa0650080:CDS 25.0%
! TTCCTTAATGACAATTTGAT+AGG + chr4_3:56831980-56831999 Msa0650080:intron 25.0%
! AACCTATCAAATTGTCATTA+AGG - chr4_3:56831985-56832004 None:intergenic 25.0%
! AAATTGCTGATAACTGTAAT+AGG + chr4_3:56832238-56832257 Msa0650080:intron 25.0%
! AATTGCTGATAACTGTAATA+GGG + chr4_3:56832239-56832258 Msa0650080:intron 25.0%
! ATAACTGTAATAGGGATATT+AGG + chr4_3:56832247-56832266 Msa0650080:intron 25.0%
!! CTTAAGCTTAGACTTTTTAA+TGG + chr4_3:56832480-56832499 Msa0650080:CDS 25.0%
! ATGTAAATCAGATCATAGAA+TGG + chr4_3:56832737-56832756 Msa0650080:intron 25.0%
! GAATATACTTACACAAAAAC+AGG + chr4_3:56832778-56832797 Msa0650080:intron 25.0%
! TTCAAATGAATTATAGTGAG+AGG - chr4_3:56833306-56833325 None:intergenic 25.0%
!! ACATTTTTCTTGATAAATGG+TGG + chr4_3:56834295-56834314 Msa0650080:three_prime_UTR 25.0%
!!! TGATTGTTTTGATTTTGAGA+CGG + chr4_3:56834409-56834428 Msa0650080:three_prime_UTR 25.0%
!!! AAAGAAAAGGGTGTTTTTTG+GGG - chr4_3:56828367-56828386 None:intergenic 30.0%
!!! GAAAGAAAAGGGTGTTTTTT+GGG - chr4_3:56828368-56828387 None:intergenic 30.0%
!!! TTTGTTTTGTTGACTGTGAA+AGG - chr4_3:56828447-56828466 None:intergenic 30.0%
! AGTTTGAAACTTTGTTGAAG+AGG + chr4_3:56828689-56828708 Msa0650080:five_prime_UTR 30.0%
! GTTTGAAACTTTGTTGAAGA+GGG + chr4_3:56828690-56828709 Msa0650080:five_prime_UTR 30.0%
! TTGAAGAGGGAAATTTTTCA+CGG + chr4_3:56828703-56828722 Msa0650080:five_prime_UTR 30.0%
TCTTGATTAGAAATCCTTTG+TGG + chr4_3:56828762-56828781 Msa0650080:five_prime_UTR 30.0%
CTTGATTAGAAATCCTTTGT+GGG + chr4_3:56828763-56828782 Msa0650080:five_prime_UTR 30.0%
GAATTATACAAAACCCACAA+AGG - chr4_3:56828779-56828798 None:intergenic 30.0%
ATAATTCTTGTGTTCTGCTA+AGG + chr4_3:56828792-56828811 Msa0650080:five_prime_UTR 30.0%
! ATTGTAGGGTTGTTCTTTTT+GGG + chr4_3:56828870-56828889 Msa0650080:five_prime_UTR 30.0%
AATGGGAATTGAGAGATATA+TGG + chr4_3:56828939-56828958 Msa0650080:exon 30.0%
! TTGTGTTTCCTTCTTTTCTA+TGG - chr4_3:56829025-56829044 None:intergenic 30.0%
!! GTTTGGTGTGTCTTATTATT+CGG + chr4_3:56829257-56829276 Msa0650080:intron 30.0%
AGATTAAAGTTTAGGTGAGT+TGG + chr4_3:56829349-56829368 Msa0650080:intron 30.0%
GATTAAAGTTTAGGTGAGTT+GGG + chr4_3:56829350-56829369 Msa0650080:intron 30.0%
ATATTCATAGTTGGACAGTA+CGG - chr4_3:56829514-56829533 None:intergenic 30.0%
TAATATAACTGTATACGGGT+AGG - chr4_3:56829612-56829631 None:intergenic 30.0%
! TGCACTTTTAGTCAGAATTT+TGG + chr4_3:56829635-56829654 Msa0650080:intron 30.0%
! ACTTTTAGTCAGAATTTTGG+TGG + chr4_3:56829638-56829657 Msa0650080:intron 30.0%
TGTGAAAAAATGGTTTAGAC+GGG + chr4_3:56829717-56829736 Msa0650080:intron 30.0%
! AATGTCATGATGGAAAGTAA+TGG - chr4_3:56829768-56829787 None:intergenic 30.0%
CTTTGCAAATATAAGATCTC+TGG - chr4_3:56829892-56829911 None:intergenic 30.0%
ATTACTGGAAGATTGTCTAA+TGG - chr4_3:56829956-56829975 None:intergenic 30.0%
AATAAAATCTTCACAGCAAG+TGG - chr4_3:56830343-56830362 None:intergenic 30.0%
! AGAAAGATTTCCTTGATTTG+AGG - chr4_3:56830498-56830517 None:intergenic 30.0%
! GTTCTTTTTATGCTTTCGTA+AGG + chr4_3:56830983-56831002 Msa0650080:CDS 30.0%
! AGCATGAATGACTATTCTTT+TGG + chr4_3:56831050-56831069 Msa0650080:CDS 30.0%
!! TGACATTGACTTTATTGTAC+AGG + chr4_3:56831133-56831152 Msa0650080:intron 30.0%
!! CTTTTGGAAATACGACAAAA+GGG + chr4_3:56831170-56831189 Msa0650080:CDS 30.0%
!! TTTTGGAAATACGACAAAAG+GGG + chr4_3:56831171-56831190 Msa0650080:CDS 30.0%
!!! CAAACTAAAGCCATTTTTCT+GGG + chr4_3:56831828-56831847 Msa0650080:CDS 30.0%
ACAGTTATCAGCAATTTCTT+GGG - chr4_3:56832235-56832254 None:intergenic 30.0%
TACAGTTATCAGCAATTTCT+TGG - chr4_3:56832236-56832255 None:intergenic 30.0%
TTCAATCAGTAAACCAAACA+AGG - chr4_3:56832297-56832316 None:intergenic 30.0%
ATAAGTGTCAATTTAGTGGT+TGG - chr4_3:56832887-56832906 None:intergenic 30.0%
ATGTGTATATCTTACCATGT+AGG - chr4_3:56833024-56833043 None:intergenic 30.0%
ATGTGTATATCTTACCATGT+AGG - chr4_3:56833024-56833043 None:intergenic 30.0%
!!! TGGTGCACTTTTAAAATCAA+TGG - chr4_3:56833185-56833204 None:intergenic 30.0%
!! GTAAATCAGTTTTAATGGTG+AGG + chr4_3:56833226-56833245 Msa0650080:intron 30.0%
TGAAGATGAGAAGAAAATCA+TGG + chr4_3:56833866-56833885 Msa0650080:CDS 30.0%
AATGCTGGATAAAGTATGTA+AGG + chr4_3:56833980-56833999 Msa0650080:CDS 30.0%
!!! TCTTGTTTTATAGGTTTTGC+TGG - chr4_3:56834029-56834048 None:intergenic 30.0%
!!! CGTGAAGTTTCTTGTTTTAT+AGG - chr4_3:56834038-56834057 None:intergenic 30.0%
ATAAAACAAGAAACTTCACG+AGG + chr4_3:56834038-56834057 Msa0650080:CDS 30.0%
AAATGAGATATGTACAGACA+TGG + chr4_3:56834348-56834367 Msa0650080:three_prime_UTR 30.0%
ATCTCTCTCATACCAAACAA+AGG + chr4_3:56828299-56828318 Msa0650080:five_prime_UTR 35.0%
!!! GGAAAGAAAAGGGTGTTTTT+TGG - chr4_3:56828369-56828388 None:intergenic 35.0%
! AACACCCTTTTCTTTCCTTT+TGG + chr4_3:56828372-56828391 Msa0650080:five_prime_UTR 35.0%
AGGACCAAAAGGAAAGAAAA+GGG - chr4_3:56828379-56828398 None:intergenic 35.0%
AAGGACCAAAAGGAAAGAAA+AGG - chr4_3:56828380-56828399 None:intergenic 35.0%
! TAGGGTTGTTTGTTTCTTGA+GGG + chr4_3:56828566-56828585 Msa0650080:five_prime_UTR 35.0%
! AAAAAGTAACAAGAGGGTGT+TGG - chr4_3:56828612-56828631 None:intergenic 35.0%
! TGAAGAGGGAAATTTTTCAC+GGG + chr4_3:56828704-56828723 Msa0650080:five_prime_UTR 35.0%
TTCTGCTAAGGAATTGAAGT+GGG + chr4_3:56828804-56828823 Msa0650080:five_prime_UTR 35.0%
ATTGTGTTTCTTAGTGACGA+AGG + chr4_3:56828846-56828865 Msa0650080:five_prime_UTR 35.0%
TTGTGTTTCTTAGTGACGAA+GGG + chr4_3:56828847-56828866 Msa0650080:five_prime_UTR 35.0%
! GATTGTAGGGTTGTTCTTTT+TGG + chr4_3:56828869-56828888 Msa0650080:five_prime_UTR 35.0%
! TTGTAGGGTTGTTCTTTTTG+GGG + chr4_3:56828871-56828890 Msa0650080:five_prime_UTR 35.0%
AGTTAGCTCCATAGAAAAGA+AGG + chr4_3:56829014-56829033 Msa0650080:CDS 35.0%
GAAAAGAAGGAAACACAAGA+TGG + chr4_3:56829027-56829046 Msa0650080:CDS 35.0%
CAACTATTTGATTCAGCATC+TGG + chr4_3:56829060-56829079 Msa0650080:CDS 35.0%
ATATCCAAGTAACCAGTGAA+AGG - chr4_3:56829113-56829132 None:intergenic 35.0%
! TTCACTGGTTACTTGGATAT+TGG + chr4_3:56829113-56829132 Msa0650080:intron 35.0%
! AAGCGGAGAGTACATAAATT+TGG + chr4_3:56829187-56829206 Msa0650080:intron 35.0%
CAGTAATAGAACAGCTTAAG+CGG - chr4_3:56829295-56829314 None:intergenic 35.0%
TACTGAGCCTATATCATGTA+CGG + chr4_3:56829310-56829329 Msa0650080:intron 35.0%
GATACTTATAGATTACCCAG+CGG + chr4_3:56829422-56829441 Msa0650080:intron 35.0%
ATACTTATAGATTACCCAGC+GGG + chr4_3:56829423-56829442 Msa0650080:intron 35.0%
TGAGATAACTCCTTATCAAC+TGG + chr4_3:56829472-56829491 Msa0650080:intron 35.0%
TATTCATAGTTGGACAGTAC+GGG - chr4_3:56829513-56829532 None:intergenic 35.0%
!! TTTTGGTGGCATGATAGAAA+AGG + chr4_3:56829652-56829671 Msa0650080:intron 35.0%
! TTTGGTGGCATGATAGAAAA+GGG + chr4_3:56829653-56829672 Msa0650080:intron 35.0%
ATCAGAACTCAATGTCATGA+TGG - chr4_3:56829778-56829797 None:intergenic 35.0%
! AAACTTTCTCGTCCTCTTTT+TGG + chr4_3:56829801-56829820 Msa0650080:intron 35.0%
GTTCGTGCTAATCATGTAAA+AGG - chr4_3:56830104-56830123 None:intergenic 35.0%
! TACAGATCATTGATTGTTCC+TGG + chr4_3:56830198-56830217 Msa0650080:intron 35.0%
! GGCAAGCATTAAGCAATTTT+TGG - chr4_3:56830473-56830492 None:intergenic 35.0%
! AGATTTCCTTGATTTGAGGA+TGG - chr4_3:56830494-56830513 None:intergenic 35.0%
ATTACATGTCTTAGGCAAAG+AGG + chr4_3:56830545-56830564 Msa0650080:intron 35.0%
AAGAGGATGATTCCAAGATA+TGG + chr4_3:56830562-56830581 Msa0650080:CDS 35.0%
ATTAGTGACATGCCATATCT+TGG - chr4_3:56830577-56830596 None:intergenic 35.0%
GATATGGCATGTCACTAATA+CGG + chr4_3:56830578-56830597 Msa0650080:CDS 35.0%
ATATGGCATGTCACTAATAC+GGG + chr4_3:56830579-56830598 Msa0650080:CDS 35.0%
! TGGATTTCTTCTAGGAATAC+TGG - chr4_3:56830622-56830641 None:intergenic 35.0%
AGTATTCCTAGAAGAAATCC+AGG + chr4_3:56830621-56830640 Msa0650080:CDS 35.0%
!!! TGTCAGTTTTGGGAAAAATG+AGG - chr4_3:56830829-56830848 None:intergenic 35.0%
! TTTTTATGCTTTCGTAAGGC+TGG + chr4_3:56830987-56831006 Msa0650080:CDS 35.0%
! TCTCATCATTTTGTCTAAGC+CGG - chr4_3:56831013-56831032 None:intergenic 35.0%
! TTTCCAAAAGCATGATTGGA+AGG - chr4_3:56831160-56831179 None:intergenic 35.0%
! CGTATTTCCAAAAGCATGAT+TGG - chr4_3:56831164-56831183 None:intergenic 35.0%
!! GCTTTTGGAAATACGACAAA+AGG + chr4_3:56831169-56831188 Msa0650080:CDS 35.0%
! TTACCAAAAGGTGTAAACGA+AGG - chr4_3:56831403-56831422 None:intergenic 35.0%
!! CCAGAAAAATGGCTTTAGTT+TGG - chr4_3:56831830-56831849 None:intergenic 35.0%
!!! CCAAACTAAAGCCATTTTTC+TGG + chr4_3:56831827-56831846 Msa0650080:CDS 35.0%
!!! AAAGCCATTTTTCTGGGATA+AGG + chr4_3:56831834-56831853 Msa0650080:CDS 35.0%
! GTTTGGAATCAGATCAAATC+AGG + chr4_3:56831883-56831902 Msa0650080:CDS 35.0%
AAATCAGGATCATTCCAGTA+AGG + chr4_3:56831898-56831917 Msa0650080:intron 35.0%
!! TTTTTGGATTTGGTCCTTAC+TGG - chr4_3:56831915-56831934 None:intergenic 35.0%
! GAGATGATAGAGACACTTTT+TGG + chr4_3:56832012-56832031 Msa0650080:CDS 35.0%
AATGCTGTGAATAAGTCCAA+TGG + chr4_3:56832039-56832058 Msa0650080:CDS 35.0%
TGAATAAGTCCAATGGTCAA+CGG + chr4_3:56832046-56832065 Msa0650080:CDS 35.0%
TCTGGATATATTGAGGTGAA+GGG - chr4_3:56832098-56832117 None:intergenic 35.0%
ATCTGGATATATTGAGGTGA+AGG - chr4_3:56832099-56832118 None:intergenic 35.0%
GTTTGTGATGCACTTTATGA+AGG + chr4_3:56832186-56832205 Msa0650080:CDS 35.0%
TTAGAAAGACATCATACAGG+TGG - chr4_3:56832376-56832395 None:intergenic 35.0%
TGGTTAGAAAGACATCATAC+AGG - chr4_3:56832379-56832398 None:intergenic 35.0%
TTAAGTTCTTCGTCTGATGT+CGG - chr4_3:56832465-56832484 None:intergenic 35.0%
!! TCATACCTCTAAAACTGCAA+AGG - chr4_3:56832637-56832656 None:intergenic 35.0%
TTGCTCATGCTCTTTCTAAT+CGG + chr4_3:56832685-56832704 Msa0650080:intron 35.0%
TATATCTTACCATGTAGGCA+CGG - chr4_3:56833019-56833038 None:intergenic 35.0%
TCTGATGTAAAAGGAACAGA+CGG + chr4_3:56833471-56833490 Msa0650080:CDS 35.0%
!! GAGCTTGCTAATGTTAAAAG+AGG + chr4_3:56833669-56833688 Msa0650080:CDS 35.0%
CAAAAACCTGAAGAATGTTG+AGG + chr4_3:56833773-56833792 Msa0650080:CDS 35.0%
!! AAGAGACTTCTTGATAATGC+TGG + chr4_3:56833965-56833984 Msa0650080:CDS 35.0%
! TTTTTCCAGCTATAGCTGAA+AGG + chr4_3:56834111-56834130 Msa0650080:CDS 35.0%
AGATTATGTTAGTTCAGACG+AGG + chr4_3:56834139-56834158 Msa0650080:CDS 35.0%
!!! TTAACTTATTTTGCAGAGGG+AGG + chr4_3:56834265-56834284 Msa0650080:intron 35.0%
GTTTGGTATGAGAGAGATAG+AGG - chr4_3:56828297-56828316 None:intergenic 40.0%
!!! GGTGTTTTTTGGGGAAAACA+AGG - chr4_3:56828358-56828377 None:intergenic 40.0%
TGTTGTACGAAAGGACCAAA+AGG - chr4_3:56828390-56828409 None:intergenic 40.0%
TTTGGTCCTTTCGTACAACA+CGG + chr4_3:56828390-56828409 Msa0650080:five_prime_UTR 40.0%
!! AAAGGGTATTTGCGTCAATG+AGG - chr4_3:56828503-56828522 None:intergenic 40.0%
! GTAGGGTTGTTTGTTTCTTG+AGG + chr4_3:56828565-56828584 Msa0650080:five_prime_UTR 40.0%
GTTCTGCTAAGGAATTGAAG+TGG + chr4_3:56828803-56828822 Msa0650080:five_prime_UTR 40.0%
TTAGTGACGAAGGGATTGTA+GGG + chr4_3:56828856-56828875 Msa0650080:five_prime_UTR 40.0%
! TGTAGGGTTGTTCTTTTTGG+GGG + chr4_3:56828872-56828891 Msa0650080:five_prime_UTR 40.0%
TGGATTGTTAGATGAGCACA+CGG + chr4_3:56829080-56829099 Msa0650080:CDS 40.0%
TAATAGAACAGCTTAAGCGG+AGG - chr4_3:56829292-56829311 None:intergenic 40.0%
GAGTTATCTCATATCCTGCA+AGG - chr4_3:56829463-56829482 None:intergenic 40.0%
! AGAAGTTGGTCCAGTTGATA+AGG - chr4_3:56829485-56829504 None:intergenic 40.0%
CAGTACGGGAAAATAGAAGT+TGG - chr4_3:56829499-56829518 None:intergenic 40.0%
!! GCAGTGCTGATATTCATAGT+TGG - chr4_3:56829523-56829542 None:intergenic 40.0%
ACAGACAGAATGCCAAAAAG+AGG - chr4_3:56829816-56829835 None:intergenic 40.0%
AGGTTCTGCAACTAATAGCT+GGG - chr4_3:56829844-56829863 None:intergenic 40.0%
TAGGTTCTGCAACTAATAGC+TGG - chr4_3:56829845-56829864 None:intergenic 40.0%
GAGAATTTCAGAGTGCAATC+TGG - chr4_3:56830078-56830097 None:intergenic 40.0%
TGGTCATTTGTCGTACTTGA+GGG + chr4_3:56830218-56830237 Msa0650080:intron 40.0%
TCATGATTTATGCCTCCTAC+TGG + chr4_3:56830386-56830405 Msa0650080:CDS 40.0%
CACCAATAAAGTCAGTTCCA+CGG + chr4_3:56830422-56830441 Msa0650080:CDS 40.0%
! AACCGTGGAACTGACTTTAT+TGG - chr4_3:56830427-56830446 None:intergenic 40.0%
! TCTTCTAGGAATACTGGATG+TGG - chr4_3:56830616-56830635 None:intergenic 40.0%
ATATGAGCTGGAGCAAAACA+CGG - chr4_3:56830647-56830666 None:intergenic 40.0%
ATATCAGAACCACCTGGTTT+AGG + chr4_3:56830663-56830682 Msa0650080:intron 40.0%
GAAAGAGGATTAGGAAGTAG+AGG - chr4_3:56830789-56830808 None:intergenic 40.0%
AAAGGAGGAGAAAGAGGATT+AGG - chr4_3:56830798-56830817 None:intergenic 40.0%
!!! AGTTTTGGGAAAAATGAGGC+CGG - chr4_3:56830825-56830844 None:intergenic 40.0%
GGCTTAGACAAAATGATGAG+AGG + chr4_3:56831012-56831031 Msa0650080:CDS 40.0%
ACTGCAAGGAAATCAATCGA+TGG + chr4_3:56831249-56831268 Msa0650080:CDS 40.0%
CTGCAAGGAAATCAATCGAT+GGG + chr4_3:56831250-56831269 Msa0650080:CDS 40.0%
GGAGGAGGATTCAATTCAAA+TGG - chr4_3:56831298-56831317 None:intergenic 40.0%
TTTGAATTGAATCCTCCTCC+TGG + chr4_3:56831298-56831317 Msa0650080:CDS 40.0%
TTGAATTGAATCCTCCTCCT+GGG + chr4_3:56831299-56831318 Msa0650080:CDS 40.0%
TTAAAGGTGGCATTCCAGAA+TGG - chr4_3:56831339-56831358 None:intergenic 40.0%
GAGACGACAGTATTACCAAA+AGG - chr4_3:56831415-56831434 None:intergenic 40.0%
!! AGTATTGATTGTGGTGGTGA+AGG - chr4_3:56831499-56831518 None:intergenic 40.0%
! TCAGCATTCTCTGTAGCTTT+TGG - chr4_3:56831772-56831791 None:intergenic 40.0%
GGAACCTTATCCCAGAAAAA+TGG - chr4_3:56831841-56831860 None:intergenic 40.0%
ATATTGAGGTGAAGGGTCTT+GGG - chr4_3:56832091-56832110 None:intergenic 40.0%
TATATTGAGGTGAAGGGTCT+TGG - chr4_3:56832092-56832111 None:intergenic 40.0%
TCGACGATCTGGATATATTG+AGG - chr4_3:56832105-56832124 None:intergenic 40.0%
! CTTTCTTTTTGTCGACGATC+TGG - chr4_3:56832116-56832135 None:intergenic 40.0%
CAATTTCTTGGGCAAACTGA+AGG - chr4_3:56832224-56832243 None:intergenic 40.0%
ATGTCTTTCTAACCAGTCGT+TGG + chr4_3:56832384-56832403 Msa0650080:intron 40.0%
AAGGTTTGAAGGAATTCCGA+CGG - chr4_3:56832429-56832448 None:intergenic 40.0%
CCATCTTCAACAAGGTTTGA+AGG - chr4_3:56832440-56832459 None:intergenic 40.0%
CCTTCAAACCTTGTTGAAGA+TGG + chr4_3:56832437-56832456 Msa0650080:CDS 40.0%
AAAGAGAATACGTGCCTACA+TGG + chr4_3:56833080-56833099 Msa0650080:intron 40.0%
ATGTTCACCAGCATTTCGAA+TGG - chr4_3:56833205-56833224 None:intergenic 40.0%
! GAAATGTCAGGTTGCTTGTA+AGG + chr4_3:56833323-56833342 Msa0650080:intron 40.0%
GTAAGGAACTAAGAAACAGC+CGG + chr4_3:56833340-56833359 Msa0650080:CDS 40.0%
GAACAGCTTCAAGAAGTTTG+TGG - chr4_3:56833371-56833390 None:intergenic 40.0%
CTTGAAGCTGTTCTCAAAAC+TGG + chr4_3:56833378-56833397 Msa0650080:CDS 40.0%
GGTATGTTCCATCGTTCATA+CGG - chr4_3:56833407-56833426 None:intergenic 40.0%
TATCGTCCTCAACATTCTTC+AGG - chr4_3:56833782-56833801 None:intergenic 40.0%
AAGAATGTTGAGGACGATAG+AGG + chr4_3:56833783-56833802 Msa0650080:CDS 40.0%
AGAATGTTGAGGACGATAGA+GGG + chr4_3:56833784-56833803 Msa0650080:CDS 40.0%
!! AAGTTTTGTCAAGAACGCTG+AGG + chr4_3:56833824-56833843 Msa0650080:CDS 40.0%
TGAGAAGAAAATCATGGCTC+TGG + chr4_3:56833872-56833891 Msa0650080:CDS 40.0%
GACGAAAATCAGAAGGTGAT+GGG - chr4_3:56834085-56834104 None:intergenic 40.0%
TGACGAAAATCAGAAGGTGA+TGG - chr4_3:56834086-56834105 None:intergenic 40.0%
CCATTTCCAACTTGAACCTA+TGG - chr4_3:56834170-56834189 None:intergenic 40.0%
!! CCATAGGTTCAAGTTGGAAA+TGG + chr4_3:56834167-56834186 Msa0650080:exon 40.0%
TTTCACAGGGATAGTTGTGT+AGG + chr4_3:56834436-56834455 Msa0650080:three_prime_UTR 40.0%
TTCACAGGGATAGTTGTGTA+GGG + chr4_3:56834437-56834456 Msa0650080:three_prime_UTR 40.0%
ACTACGCGTAAGCCTTTGTT+TGG - chr4_3:56828314-56828333 None:intergenic 45.0%
TAGAGACCGTGTTGTACGAA+AGG - chr4_3:56828399-56828418 None:intergenic 45.0%
! GTTTTTGTGGCTGCTTAGCT+TGG + chr4_3:56828475-56828494 Msa0650080:five_prime_UTR 45.0%
! AAGGAATTGAAGTGGGTTCG+TGG + chr4_3:56828811-56828830 Msa0650080:five_prime_UTR 45.0%
CTTAGTGACGAAGGGATTGT+AGG + chr4_3:56828855-56828874 Msa0650080:five_prime_UTR 45.0%
!! GTAGGGTTGTTCTTTTTGGG+GGG + chr4_3:56828873-56828892 Msa0650080:five_prime_UTR 45.0%
!! TAGGGTTGTTCTTTTTGGGG+GGG + chr4_3:56828874-56828893 Msa0650080:five_prime_UTR 45.0%
! GACTCCTTTCACTGGTTACT+TGG + chr4_3:56829106-56829125 Msa0650080:intron 45.0%
AGCTGGACCGTACATGATAT+AGG - chr4_3:56829320-56829339 None:intergenic 45.0%
! TTTAGGTGAGTTGGGTCTCA+GGG + chr4_3:56829358-56829377 Msa0650080:intron 45.0%
CTCAAGTACGACAAATGACC+AGG - chr4_3:56830219-56830238 None:intergenic 45.0%
CTGGTCATTTGTCGTACTTG+AGG + chr4_3:56830217-56830236 Msa0650080:intron 45.0%
GTTGCAAGTTTCATGACTGC+AGG + chr4_3:56830302-56830321 Msa0650080:intron 45.0%
AGTTTCATGACTGCAGGCAA+AGG + chr4_3:56830308-56830327 Msa0650080:intron 45.0%
!! GACTGCAGGCAAAGGTATTT+AGG + chr4_3:56830316-56830335 Msa0650080:intron 45.0%
CTCCTACTGGAATTGTTTGC+CGG + chr4_3:56830399-56830418 Msa0650080:CDS 45.0%
! GGAACTGACTTTATTGGTGC+CGG - chr4_3:56830421-56830440 None:intergenic 45.0%
TGGATATCTGCTTGAGCAAC+TGG - chr4_3:56830453-56830472 None:intergenic 45.0%
TGCTTGCCATCCTCAAATCA+AGG + chr4_3:56830485-56830504 Msa0650080:CDS 45.0%
TCTTTCTCCTCCTTTGTCAC+CGG + chr4_3:56830803-56830822 Msa0650080:CDS 45.0%
AAAAATGAGGCCGGTGACAA+AGG - chr4_3:56830816-56830835 None:intergenic 45.0%
TTCATGCTCAAGCTGAGCAA+GGG - chr4_3:56831038-56831057 None:intergenic 45.0%
ATTCATGCTCAAGCTGAGCA+AGG - chr4_3:56831039-56831058 None:intergenic 45.0%
! GGTCCTTCCAATCATGCTTT+TGG + chr4_3:56831154-56831173 Msa0650080:intron 45.0%
AACAAGAAGACCTCACTGCA+AGG + chr4_3:56831235-56831254 Msa0650080:CDS 45.0%
! CGATTGATTTCCTTGCAGTG+AGG - chr4_3:56831248-56831267 None:intergenic 45.0%
! ATGGGAGCTTTTACTGCTGT+CGG + chr4_3:56831268-56831287 Msa0650080:CDS 45.0%
AGAGTGGGAACTATCCATTC+TGG + chr4_3:56831322-56831341 Msa0650080:CDS 45.0%
! CCAAAAGGTGTAAACGAAGG+CGG - chr4_3:56831400-56831419 None:intergenic 45.0%
!! CCAGCTAGTATTGATTGTGG+TGG - chr4_3:56831505-56831524 None:intergenic 45.0%
CCACCACAATCAATACTAGC+TGG + chr4_3:56831502-56831521 Msa0650080:CDS 45.0%
!! GCACCAGCTAGTATTGATTG+TGG - chr4_3:56831508-56831527 None:intergenic 45.0%
! TTCTCTGTAGCTTTTGGTGG+AGG - chr4_3:56831766-56831785 None:intergenic 45.0%
! GCATTCTCTGTAGCTTTTGG+TGG - chr4_3:56831769-56831788 None:intergenic 45.0%
ATCAGGAAATGAGCTACCGT+CGG + chr4_3:56832410-56832429 Msa0650080:intron 45.0%
AATGGCGATCTGTCTCAACT+TGG + chr4_3:56832498-56832517 Msa0650080:CDS 45.0%
ATGGCGATCTGTCTCAACTT+GGG + chr4_3:56832499-56832518 Msa0650080:CDS 45.0%
TCCATTCGCTTAAACGCAGA+GGG - chr4_3:56832561-56832580 None:intergenic 45.0%
TTCCATTCGCTTAAACGCAG+AGG - chr4_3:56832562-56832581 None:intergenic 45.0%
AGAGGAGCTCACTACTACTA+TGG + chr4_3:56832608-56832627 Msa0650080:CDS 45.0%
!! GGAGTCCTTTGCAGTTTTAG+AGG + chr4_3:56832629-56832648 Msa0650080:CDS 45.0%
CATGAGCAATGCAACTGAAG+GGG - chr4_3:56832674-56832693 None:intergenic 45.0%
GCATGAGCAATGCAACTGAA+GGG - chr4_3:56832675-56832694 None:intergenic 45.0%
AGCATGAGCAATGCAACTGA+AGG - chr4_3:56832676-56832695 None:intergenic 45.0%
AAGTGCACCATTCGAAATGC+TGG + chr4_3:56833195-56833214 Msa0650080:intron 45.0%
CATTGAGTTTGTGTGCGTGA+TGG - chr4_3:56833260-56833279 None:intergenic 45.0%
CAAGAAGTTTGTGGAACAGC+CGG - chr4_3:56833362-56833381 None:intergenic 45.0%
ACTGGTAACCGTATGAACGA+TGG + chr4_3:56833396-56833415 Msa0650080:CDS 45.0%
ATGAACGATGGAACATACCG+TGG + chr4_3:56833408-56833427 Msa0650080:CDS 45.0%
TAAATGCTTGTGCACCACCA+CGG - chr4_3:56833428-56833447 None:intergenic 45.0%
TCAAGAGATTATCCGCTCTG+AGG + chr4_3:56833521-56833540 Msa0650080:CDS 45.0%
CAAGAGATTATCCGCTCTGA+GGG + chr4_3:56833522-56833541 Msa0650080:CDS 45.0%
! AGCAGTTGCTGTTAAGCTGT+CGG - chr4_3:56833709-56833728 None:intergenic 45.0%
!! TAGAGGGTTTTGTGAGACAG+TGG + chr4_3:56833800-56833819 Msa0650080:CDS 45.0%
! CACCTTCTGATTTTCGTCAG+CGG + chr4_3:56834087-56834106 Msa0650080:CDS 45.0%
TTCCAGCTATAGCTGAAAGG+AGG + chr4_3:56834114-56834133 Msa0650080:CDS 45.0%
ATCCTCCTTTCAGCTATAGC+TGG - chr4_3:56834119-56834138 None:intergenic 45.0%
GAGAGTCCATAGGTTCAAGT+TGG + chr4_3:56834161-56834180 Msa0650080:exon 45.0%
!!! ACTTATTTTGCAGAGGGAGG+AGG + chr4_3:56834268-56834287 Msa0650080:intron 45.0%
GAGATATGTACAGACATGGC+TGG + chr4_3:56834352-56834371 Msa0650080:three_prime_UTR 45.0%
ATATGTACAGACATGGCTGG+AGG + chr4_3:56834355-56834374 Msa0650080:three_prime_UTR 45.0%
! TTTGAGACGGTCACTTTCAC+AGG + chr4_3:56834422-56834441 Msa0650080:three_prime_UTR 45.0%
! TTGAGACGGTCACTTTCACA+GGG + chr4_3:56834423-56834442 Msa0650080:three_prime_UTR 45.0%
!!! ATAATCTTTTTTAATATTTA+GGG - chr4_3:56834224-56834243 None:intergenic 5.0%
!!! TATAATCTTTTTTAATATTT+AGG - chr4_3:56834225-56834244 None:intergenic 5.0%
! GAATTGAAGTGGGTTCGTGG+TGG + chr4_3:56828814-56828833 Msa0650080:five_prime_UTR 50.0%
CACGGTAAGACTCCTTTCAC+TGG + chr4_3:56829098-56829117 Msa0650080:intron 50.0%
! GTTTAGGTGAGTTGGGTCTC+AGG + chr4_3:56829357-56829376 Msa0650080:intron 50.0%
CTCATATCCTGCAAGGTCGT+GGG - chr4_3:56829456-56829475 None:intergenic 50.0%
TCTCATATCCTGCAAGGTCG+TGG - chr4_3:56829457-56829476 None:intergenic 50.0%
GAATATCAGCACTGCCAGTC+AGG + chr4_3:56829528-56829547 Msa0650080:intron 50.0%
CTGTATACGGGTAGGTACAG+TGG - chr4_3:56829604-56829623 None:intergenic 50.0%
GGTGGCATGATAGAAAAGGG+TGG + chr4_3:56829656-56829675 Msa0650080:intron 50.0%
CGGCAAACAATTCCAGTAGG+AGG - chr4_3:56830401-56830420 None:intergenic 50.0%
TGCCGGCAAACAATTCCAGT+AGG - chr4_3:56830404-56830423 None:intergenic 50.0%
ACACGGCCTGGATTTCTTCT+AGG - chr4_3:56830630-56830649 None:intergenic 50.0%
!! CAGGTGGTTCTGATATGAGC+TGG - chr4_3:56830659-56830678 None:intergenic 50.0%
CAGCTCATATCAGAACCACC+TGG + chr4_3:56830657-56830676 Msa0650080:CDS 50.0%
! TCAGGTGATGGTGTGAGACT+CGG - chr4_3:56830711-56830730 None:intergenic 50.0%
GGTGACAAAGGAGGAGAAAG+AGG - chr4_3:56830804-56830823 None:intergenic 50.0%
CCTCCATCTTCTGACACGAA+CGG + chr4_3:56830876-56830895 Msa0650080:CDS 50.0%
CTCCATCTTCTGACACGAAC+GGG + chr4_3:56830877-56830896 Msa0650080:CDS 50.0%
TTCCCGTTCGTGTCAGAAGA+TGG - chr4_3:56830882-56830901 None:intergenic 50.0%
ATCTTCTGACACGAACGGGA+AGG + chr4_3:56830881-56830900 Msa0650080:CDS 50.0%
TATGCTTTCGTAAGGCTGGC+CGG + chr4_3:56830991-56831010 Msa0650080:CDS 50.0%
ACGACAAAAGGGGAGAAGCT+TGG + chr4_3:56831181-56831200 Msa0650080:CDS 50.0%
TGTAAACGAAGGCGGCTCAT+GGG - chr4_3:56831392-56831411 None:intergenic 50.0%
! CCGCCTTCGTTTACACCTTT+TGG + chr4_3:56831397-56831416 Msa0650080:CDS 50.0%
! TGTGGTGGTGAAGGAGTAGT+AGG - chr4_3:56831490-56831509 None:intergenic 50.0%
GCTACAGAGAATGCTGAAGC+AGG + chr4_3:56831775-56831794 Msa0650080:CDS 50.0%
AATGCTGAAGCAGGTGCAGA+AGG + chr4_3:56831784-56831803 Msa0650080:CDS 50.0%
! TAACCAGTCGTTGGCTGATC+AGG + chr4_3:56832393-56832412 Msa0650080:intron 50.0%
TTTCCTGATCAGCCAACGAC+TGG - chr4_3:56832399-56832418 None:intergenic 50.0%
!! TGTCGGTGCCATCTTCAACA+AGG - chr4_3:56832448-56832467 None:intergenic 50.0%
TGACCGTTTCCTGAAAGCCA+TGG + chr4_3:56832527-56832546 Msa0650080:CDS 50.0%
CCACCATGGCTTTCAGGAAA+CGG - chr4_3:56832533-56832552 None:intergenic 50.0%
GAATGTCCACCATGGCTTTC+AGG - chr4_3:56832539-56832558 None:intergenic 50.0%
TCCCTCTGCGTTTAAGCGAA+TGG + chr4_3:56832557-56832576 Msa0650080:CDS 50.0%
GTTATGTAGCCGTGCCTACA+TGG + chr4_3:56833007-56833026 Msa0650080:intron 50.0%
AACGATGGAACATACCGTGG+TGG + chr4_3:56833411-56833430 Msa0650080:CDS 50.0%
! CAGCTTTTATGCCCTCAGAG+CGG - chr4_3:56833536-56833555 None:intergenic 50.0%
ACAGCAACTGCTGCCAAACT+TGG + chr4_3:56833717-56833736 Msa0650080:CDS 50.0%
!! CTTTGGCTTTCACAAGACCG+TGG - chr4_3:56833743-56833762 None:intergenic 50.0%
AGCACGGGCGATTACTTTCA+CGG + chr4_3:56833900-56833919 Msa0650080:CDS 50.0%
!! AGAAGGTGATGGGCGTGTAT+CGG - chr4_3:56834075-56834094 None:intergenic 50.0%
AGCCGCTGACGAAAATCAGA+AGG - chr4_3:56834092-56834111 None:intergenic 50.0%
TTCAGACGAGGAGAGTCCAT+AGG + chr4_3:56834151-56834170 Msa0650080:CDS 50.0%
AGTTGAACCCACGACCTTGC+AGG + chr4_3:56829446-56829465 Msa0650080:intron 55.0%
TTGAGCAACTGGTCGAACCG+TGG - chr4_3:56830442-56830461 None:intergenic 55.0%
! AGGTGATGGTGTGAGACTCG+GGG - chr4_3:56830709-56830728 None:intergenic 55.0%
! CAGGTGATGGTGTGAGACTC+GGG - chr4_3:56830710-56830729 None:intergenic 55.0%
AATGGAGGGAGACTGGGTTC+AGG - chr4_3:56830729-56830748 None:intergenic 55.0%
TGATGGGGATAGGCTGGGTT+CGG - chr4_3:56830754-56830773 None:intergenic 55.0%
! GGATTAGGAAGTAGAGGCGC+TGG - chr4_3:56830783-56830802 None:intergenic 55.0%
AATGAGGCCGGTGACAAAGG+AGG - chr4_3:56830813-56830832 None:intergenic 55.0%
!! CTGCTGGCGGTGTCAGTTTT+GGG - chr4_3:56830839-56830858 None:intergenic 55.0%
GAAATGTCTGCAGCTGCTGG+CGG - chr4_3:56830852-56830871 None:intergenic 55.0%
GCAGAAATGTCTGCAGCTGC+TGG - chr4_3:56830855-56830874 None:intergenic 55.0%
CCGTTCGTGTCAGAAGATGG+AGG - chr4_3:56830879-56830898 None:intergenic 55.0%
AATCCTCCTCCTGGGAGAGT+GGG + chr4_3:56831307-56831326 Msa0650080:CDS 55.0%
ATAGTTCCCACTCTCCCAGG+AGG - chr4_3:56831316-56831335 None:intergenic 55.0%
TGGATAGTTCCCACTCTCCC+AGG - chr4_3:56831319-56831338 None:intergenic 55.0%
CCTGGAGGAGGTCTTAAAGG+TGG - chr4_3:56831352-56831371 None:intergenic 55.0%
!! CCACCTTTAAGACCTCCTCC+AGG + chr4_3:56831349-56831368 Msa0650080:CDS 55.0%
CTGCCTGGAGGAGGTCTTAA+AGG - chr4_3:56831355-56831374 None:intergenic 55.0%
!! CTTTAAGACCTCCTCCAGGC+AGG + chr4_3:56831353-56831372 Msa0650080:CDS 55.0%
AGAGGATTCATCCTGCCTGG+AGG - chr4_3:56831367-56831386 None:intergenic 55.0%
GGAAGAGGATTCATCCTGCC+TGG - chr4_3:56831370-56831389 None:intergenic 55.0%
GTAAACGAAGGCGGCTCATG+GGG - chr4_3:56831391-56831410 None:intergenic 55.0%
GTGTAAACGAAGGCGGCTCA+TGG - chr4_3:56831393-56831412 None:intergenic 55.0%
CTAGCAACACCAGACTGTCG+AGG - chr4_3:56831457-56831476 None:intergenic 55.0%
GGTGGTGAAGGAGTAGTAGG+AGG - chr4_3:56831487-56831506 None:intergenic 55.0%
TTTGGCACCAAGTGGTGCAG+GGG - chr4_3:56831599-56831618 None:intergenic 55.0%
GTTTGGCACCAAGTGGTGCA+GGG - chr4_3:56831600-56831619 None:intergenic 55.0%
! TTAGCACCAGATGGTGCTGG+CGG - chr4_3:56831688-56831707 None:intergenic 55.0%
GGTTTAGCACCAGATGGTGC+TGG - chr4_3:56831691-56831710 None:intergenic 55.0%
! GCACCATCTGGTGCTAAACC+TGG + chr4_3:56831691-56831710 Msa0650080:CDS 55.0%
GGACCAGGTTTAGCACCAGA+TGG - chr4_3:56831697-56831716 None:intergenic 55.0%
! GTAGCTTTTGGTGGAGGTCG+AGG - chr4_3:56831760-56831779 None:intergenic 55.0%
GTCCAATGGTCAACGGCAGA+AGG + chr4_3:56832053-56832072 Msa0650080:CDS 55.0%
CTCCTTCTGCCGTTGACCAT+TGG - chr4_3:56832058-56832077 None:intergenic 55.0%
TTGAGGTGAAGGGTCTTGGG+AGG - chr4_3:56832088-56832107 None:intergenic 55.0%
GCTTTCAGGAAACGGTCAGC+AGG - chr4_3:56832525-56832544 None:intergenic 55.0%
CCGTTTCCTGAAAGCCATGG+TGG + chr4_3:56832530-56832549 Msa0650080:CDS 55.0%
GGGCATAAAAGCTGCTCGAG+CGG + chr4_3:56833542-56833561 Msa0650080:CDS 55.0%
GAAGACCACTATCGCGAGCT+TGG + chr4_3:56833618-56833637 Msa0650080:CDS 55.0%
CAAGACCAAGCTCGCGATAG+TGG - chr4_3:56833626-56833645 None:intergenic 55.0%
!! TCGCGAGCTTGGTCTTGAGA+TGG + chr4_3:56833629-56833648 Msa0650080:CDS 55.0%
ACTGCTGCCAAACTTGGCCA+CGG + chr4_3:56833723-56833742 Msa0650080:CDS 55.0%
CACAAGACCGTGGCCAAGTT+TGG - chr4_3:56833733-56833752 None:intergenic 55.0%
!! CATGGCTCTGGTGAAGAGCA+CGG + chr4_3:56833884-56833903 Msa0650080:CDS 55.0%
!! ATGGCTCTGGTGAAGAGCAC+GGG + chr4_3:56833885-56833904 Msa0650080:CDS 55.0%
GCACGGGCGATTACTTTCAC+GGG + chr4_3:56833901-56833920 Msa0650080:CDS 55.0%
CTTTCACGGGAATGCTGCGA+AGG + chr4_3:56833914-56833933 Msa0650080:CDS 55.0%
GGGAATGCTGCGAAGGATGA+TGG + chr4_3:56833921-56833940 Msa0650080:CDS 55.0%
TTGGGTCTCAGGGCTCACCA+GGG + chr4_3:56829368-56829387 Msa0650080:intron 60.0%
TCGTGGGTTCAACTCCCGCT+GGG - chr4_3:56829440-56829459 None:intergenic 60.0%
AGCTGGAGCAAAACACGGCC+TGG - chr4_3:56830642-56830661 None:intergenic 60.0%
GGGTAGGTGATCCAACTGCG+GGG - chr4_3:56830689-56830708 None:intergenic 60.0%
GGGGTAGGTGATCCAACTGC+GGG - chr4_3:56830690-56830709 None:intergenic 60.0%
CGGGGTAGGTGATCCAACTG+CGG - chr4_3:56830691-56830710 None:intergenic 60.0%
GATGGTGTGAGACTCGGGGT+AGG - chr4_3:56830705-56830724 None:intergenic 60.0%
GGGAGACTGGGTTCAGGTGA+TGG - chr4_3:56830723-56830742 None:intergenic 60.0%
TCGGGCAATGGAGGGAGACT+GGG - chr4_3:56830735-56830754 None:intergenic 60.0%
TTCGGGCAATGGAGGGAGAC+TGG - chr4_3:56830736-56830755 None:intergenic 60.0%
GATAGGCTGGGTTCGGGCAA+TGG - chr4_3:56830747-56830766 None:intergenic 60.0%
GATGGGGATAGGCTGGGTTC+GGG - chr4_3:56830753-56830772 None:intergenic 60.0%
!! AGGAAGTAGAGGCGCTGGAG+CGG - chr4_3:56830778-56830797 None:intergenic 60.0%
!! GCTGCTGGCGGTGTCAGTTT+TGG - chr4_3:56830840-56830859 None:intergenic 60.0%
GAATCCTCCTCCTGGGAGAG+TGG + chr4_3:56831306-56831325 Msa0650080:CDS 60.0%
GGATTCATCCTGCCTGGAGG+AGG - chr4_3:56831364-56831383 None:intergenic 60.0%
ACACCAGACTGTCGAGGAGG+AGG - chr4_3:56831451-56831470 None:intergenic 60.0%
GCAACACCAGACTGTCGAGG+AGG - chr4_3:56831454-56831473 None:intergenic 60.0%
AGGGCGAGGAGGAACAGGTT+TGG - chr4_3:56831530-56831549 None:intergenic 60.0%
! GTGGAGCAGGGTGTAGTGGA+GGG - chr4_3:56831549-56831568 None:intergenic 60.0%
GTTTGGCACCAGGTGGAGCA+GGG - chr4_3:56831561-56831580 None:intergenic 60.0%
GGACTAGGTTTGGCACCAGG+TGG - chr4_3:56831568-56831587 None:intergenic 60.0%
GGAGGACTAGGTTTGGCACC+AGG - chr4_3:56831571-56831590 None:intergenic 60.0%
!! GGGTGGTGGAGGACTAGGTT+TGG - chr4_3:56831578-56831597 None:intergenic 60.0%
TTGGCACCAAGTGGTGCAGG+GGG - chr4_3:56831598-56831617 None:intergenic 60.0%
GGTTTGGCACCAAGTGGTGC+AGG - chr4_3:56831601-56831620 None:intergenic 60.0%
!! GCACCACTTGGTGCCAAACC+CGG + chr4_3:56831601-56831620 Msa0650080:CDS 60.0%
TTTGGCACCAGGTGGTGCAG+GGG - chr4_3:56831644-56831663 None:intergenic 60.0%
GTTTGGCACCAGGTGGTGCA+GGG - chr4_3:56831645-56831664 None:intergenic 60.0%
CTCTTAGGAGGAGGAGGAGG+TGG - chr4_3:56831724-56831743 None:intergenic 60.0%
CCACTCTTAGGAGGAGGAGG+AGG - chr4_3:56831727-56831746 None:intergenic 60.0%
CCTCCTCCTCCTCCTAAGAG+TGG + chr4_3:56831724-56831743 Msa0650080:CDS 60.0%
CCACCACTCTTAGGAGGAGG+AGG - chr4_3:56831730-56831749 None:intergenic 60.0%
CCTCCTCCTCCTAAGAGTGG+TGG + chr4_3:56831727-56831746 Msa0650080:CDS 60.0%
GCTCCACCACTCTTAGGAGG+AGG - chr4_3:56831733-56831752 None:intergenic 60.0%
GGAGCTCCACCACTCTTAGG+AGG - chr4_3:56831736-56831755 None:intergenic 60.0%
GGAGGAGCTCCACCACTCTT+AGG - chr4_3:56831739-56831758 None:intergenic 60.0%
! GCTTTTGGTGGAGGTCGAGG+AGG - chr4_3:56831757-56831776 None:intergenic 60.0%
GCTGAAGCAGGTGCAGAAGG+TGG + chr4_3:56831787-56831806 Msa0650080:CDS 60.0%
AGGTGAAGGGTCTTGGGAGG+AGG - chr4_3:56832085-56832104 None:intergenic 60.0%
GCGCGCATTGAACGTGACGA+TGG + chr4_3:56832158-56832177 Msa0650080:CDS 60.0%
CGCAGAGGGAATGTCCACCA+TGG - chr4_3:56832547-56832566 None:intergenic 60.0%
GGGCGTGTATCGGACGAAGA+CGG - chr4_3:56834065-56834084 None:intergenic 60.0%
GTACAGACATGGCTGGAGGC+TGG + chr4_3:56834359-56834378 Msa0650080:three_prime_UTR 60.0%
GTTGGGTCTCAGGGCTCACC+AGG + chr4_3:56829367-56829386 Msa0650080:intron 65.0%
CCAACGCTCTCTGAGCCTCG+AGG - chr4_3:56829398-56829417 None:intergenic 65.0%
! CCTCGAGGCTCAGAGAGCGT+TGG + chr4_3:56829395-56829414 Msa0650080:intron 65.0%
GTCGTGGGTTCAACTCCCGC+TGG - chr4_3:56829441-56829460 None:intergenic 65.0%
ACTGCGGGGCCTAAACCAGG+TGG - chr4_3:56830675-56830694 None:intergenic 65.0%
CCAACTGCGGGGCCTAAACC+AGG - chr4_3:56830678-56830697 None:intergenic 65.0%
CCTGGTTTAGGCCCCGCAGT+TGG + chr4_3:56830675-56830694 Msa0650080:intron 65.0%
GGCTGGGTTCGGGCAATGGA+GGG - chr4_3:56830743-56830762 None:intergenic 65.0%
AGGCTGGGTTCGGGCAATGG+AGG - chr4_3:56830744-56830763 None:intergenic 65.0%
!! GCGGGTGATGGGGATAGGCT+GGG - chr4_3:56830759-56830778 None:intergenic 65.0%
!! AGCGGGTGATGGGGATAGGC+TGG - chr4_3:56830760-56830779 None:intergenic 65.0%
!! CTGGAGCGGGTGATGGGGAT+AGG - chr4_3:56830764-56830783 None:intergenic 65.0%
!! GGAAGTAGAGGCGCTGGAGC+GGG - chr4_3:56830777-56830796 None:intergenic 65.0%
GTTCCCACTCTCCCAGGAGG+AGG - chr4_3:56831313-56831332 None:intergenic 65.0%
GAAGGCGGCTCATGGGGAAG+AGG - chr4_3:56831385-56831404 None:intergenic 65.0%
CCAGACTGTCGAGGAGGAGG+AGG - chr4_3:56831448-56831467 None:intergenic 65.0%
CCTCCTCCTCCTCGACAGTC+TGG + chr4_3:56831445-56831464 Msa0650080:CDS 65.0%
AGTGGAGGGCGAGGAGGAAC+AGG - chr4_3:56831535-56831554 None:intergenic 65.0%
GGTGGAGCAGGGTGTAGTGG+AGG - chr4_3:56831550-56831569 None:intergenic 65.0%
CCAGGTGGAGCAGGGTGTAG+TGG - chr4_3:56831553-56831572 None:intergenic 65.0%
CCACTACACCCTGCTCCACC+TGG + chr4_3:56831550-56831569 Msa0650080:CDS 65.0%
GGTTTGGCACCAGGTGGAGC+AGG - chr4_3:56831562-56831581 None:intergenic 65.0%
GGACCGGGTTTGGCACCAAG+TGG - chr4_3:56831607-56831626 None:intergenic 65.0%
TTGGCACCAGGTGGTGCAGG+GGG - chr4_3:56831643-56831662 None:intergenic 65.0%
GGTTTGGCACCAGGTGGTGC+AGG - chr4_3:56831646-56831665 None:intergenic 65.0%
! GCACCACCTGGTGCCAAACC+CGG + chr4_3:56831646-56831665 Msa0650080:CDS 65.0%
!! AGATGGTGCTGGCGGTGGTG+GGG - chr4_3:56831680-56831699 None:intergenic 65.0%
!! CAGATGGTGCTGGCGGTGGT+GGG - chr4_3:56831681-56831700 None:intergenic 65.0%
GCTCACCAGGGCAGACCTCG+AGG + chr4_3:56829380-56829399 Msa0650080:intron 70.0%
CTGAGCCTCGAGGTCTGCCC+TGG - chr4_3:56829388-56829407 None:intergenic 70.0%
!! AGGCGCTGGAGCGGGTGATG+GGG - chr4_3:56830769-56830788 None:intergenic 70.0%
!! GAGGCGCTGGAGCGGGTGAT+GGG - chr4_3:56830770-56830789 None:intergenic 70.0%
!! AGAGGCGCTGGAGCGGGTGA+TGG - chr4_3:56830771-56830790 None:intergenic 70.0%
! GGGTGTAGTGGAGGGCGAGG+AGG - chr4_3:56831541-56831560 None:intergenic 70.0%
! GCAGGGTGTAGTGGAGGGCG+AGG - chr4_3:56831544-56831563 None:intergenic 70.0%
!! GCAGGGGGTGGTGGAGGACT+AGG - chr4_3:56831583-56831602 None:intergenic 70.0%
! AGTGGTGCAGGGGGTGGTGG+AGG - chr4_3:56831589-56831608 None:intergenic 70.0%
CCAAGTGGTGCAGGGGGTGG+TGG - chr4_3:56831592-56831611 None:intergenic 70.0%
CCACCACCCCCTGCACCACT+TGG + chr4_3:56831589-56831608 Msa0650080:CDS 70.0%
GCACCAAGTGGTGCAGGGGG+TGG - chr4_3:56831595-56831614 None:intergenic 70.0%
TGGGGGAGGAGGACCGGGTT+TGG - chr4_3:56831617-56831636 None:intergenic 70.0%
AGGTGGTGCAGGGGGTGGTG+GGG - chr4_3:56831635-56831654 None:intergenic 70.0%
CAGGTGGTGCAGGGGGTGGT+GGG - chr4_3:56831636-56831655 None:intergenic 70.0%
GGACCGGGTTTGGCACCAGG+TGG - chr4_3:56831652-56831671 None:intergenic 70.0%
GGAGGACCGGGTTTGGCACC+AGG - chr4_3:56831610-56831629 None:intergenic 70.0%
TGGGGGAGGAGGACCGGGTT+TGG - chr4_3:56831617-56831636 None:intergenic 70.0%
!! GATGGTGCTGGCGGTGGTGG+GGG - chr4_3:56831679-56831698 None:intergenic 70.0%
!! CCAGATGGTGCTGGCGGTGG+TGG - chr4_3:56831682-56831701 None:intergenic 70.0%
CCACCACCGCCAGCACCATC+TGG + chr4_3:56831679-56831698 Msa0650080:CDS 70.0%
!! GCACCAGATGGTGCTGGCGG+TGG - chr4_3:56831685-56831704 None:intergenic 70.0%
GGAGGAGGTGGACGAGGACC+AGG - chr4_3:56831712-56831731 None:intergenic 70.0%
GGAGGAGGAGGAGGTGGACG+AGG - chr4_3:56831718-56831737 None:intergenic 70.0%
!! GGTGGTGGGGGAGGAGGACC+GGG - chr4_3:56831622-56831641 None:intergenic 75.0%
!! GGGTGGTGGGGGAGGAGGAC+CGG - chr4_3:56831623-56831642 None:intergenic 75.0%
! GGTGGTGCAGGGGGTGGTGG+GGG - chr4_3:56831634-56831653 None:intergenic 75.0%
CCAGGTGGTGCAGGGGGTGG+TGG - chr4_3:56831637-56831656 None:intergenic 75.0%
CCACCACCCCCTGCACCACC+TGG + chr4_3:56831634-56831653 Msa0650080:CDS 75.0%
GCACCAGGTGGTGCAGGGGG+TGG - chr4_3:56831640-56831659 None:intergenic 75.0%
!! GGTGGTGGGGGAGGAGGACC+GGG - chr4_3:56831622-56831641 None:intergenic 75.0%
!! CGGTGGTGGGGGAGGAGGAC+CGG - chr4_3:56831668-56831687 None:intergenic 75.0%
!!! GCAGGGGGTGGTGGGGGAGG+AGG - chr4_3:56831628-56831647 None:intergenic 80.0%
!!! GGTGCAGGGGGTGGTGGGGG+AGG - chr4_3:56831631-56831650 None:intergenic 80.0%
!!! GCTGGCGGTGGTGGGGGAGG+AGG - chr4_3:56831673-56831692 None:intergenic 80.0%
!!! GGTGCTGGCGGTGGTGGGGG+AGG - chr4_3:56831676-56831695 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 56828284 56834543 56828284 ID=Msa0650080;Name=Msa0650080
chr4_3 mRNA 56828284 56834543 56828284 ID=Msa0650080-mRNA-1;Parent=Msa0650080;Name=Msa0650080-mRNA-1;_AED=0.04;_eAED=0.04;_QI=656|0.66|0.6|1|0.44|0.4|10|279|959
chr4_3 exon 56828284 56829101 56828284 ID=Msa0650080-mRNA-1:exon:14844;Parent=Msa0650080-mRNA-1
chr4_3 exon 56830324 56830522 56830324 ID=Msa0650080-mRNA-1:exon:14845;Parent=Msa0650080-mRNA-1
chr4_3 exon 56830559 56830678 56830559 ID=Msa0650080-mRNA-1:exon:14846;Parent=Msa0650080-mRNA-1
chr4_3 exon 56830685 56830915 56830685 ID=Msa0650080-mRNA-1:exon:14847;Parent=Msa0650080-mRNA-1
chr4_3 exon 56830946 56831071 56830946 ID=Msa0650080-mRNA-1:exon:14848;Parent=Msa0650080-mRNA-1
chr4_3 exon 56831155 56831914 56831155 ID=Msa0650080-mRNA-1:exon:14849;Parent=Msa0650080-mRNA-1
chr4_3 exon 56832002 56832207 56832002 ID=Msa0650080-mRNA-1:exon:14850;Parent=Msa0650080-mRNA-1
chr4_3 exon 56832415 56832650 56832415 ID=Msa0650080-mRNA-1:exon:14851;Parent=Msa0650080-mRNA-1
chr4_3 exon 56833333 56834188 56833333 ID=Msa0650080-mRNA-1:exon:14852;Parent=Msa0650080-mRNA-1
chr4_3 exon 56834281 56834543 56834281 ID=Msa0650080-mRNA-1:exon:14853;Parent=Msa0650080-mRNA-1
chr4_3 five_prime_UTR 56828284 56828939 56828284 ID=Msa0650080-mRNA-1:five_prime_utr;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56828940 56829101 56828940 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56830324 56830522 56830324 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56830559 56830678 56830559 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56830685 56830915 56830685 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56830946 56831071 56830946 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56831155 56831914 56831155 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56832002 56832207 56832002 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56832415 56832650 56832415 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 CDS 56833333 56834172 56833333 ID=Msa0650080-mRNA-1:cds;Parent=Msa0650080-mRNA-1
chr4_3 three_prime_UTR 56834173 56834188 56834173 ID=Msa0650080-mRNA-1:three_prime_utr;Parent=Msa0650080-mRNA-1
chr4_3 three_prime_UTR 56834281 56834543 56834281 ID=Msa0650080-mRNA-1:three_prime_utr;Parent=Msa0650080-mRNA-1
Gene Sequence

>Msa0650080

ATGGGAATTGAGAGATATATGGTTGTCATAAAGTTTAGTTTTTGCGTTCTTTTAGTTCTGCAACTTGTAGCAGCAGTTAGCTCCATAGAAAAGAAGGAAACACAAGATGGTTTTGTTAGACAACTATTTGATTCAGCATCTGGATTGTTAGATGAGCACACGGCAAAGGTATTTAGGACCACTTGCTGTGAAGATTTTATTCATTTAAAGAAAGAGGATGAATATCATGATTTATGCCTCCTACTGGAATTGTTTGCCGGCACCAATAAAGTCAGTTCCACGGTTCGACCAGTTGCTCAAGCAGATATCCAAAAATTGCTTAATGCTTGCCATCCTCAAATCAAGGAAATCTTTCTTCATTGCAAAGAGGATGATTCCAAGATATGGCATGTCACTAATACGGGATATCTTTTTTCCACATCCAGTATTCCTAGAAGAAATCCAGGCCGTGTTTTGCTCCAGCTCATATCAGAACCACCTGGCCCCGCAGTTGGATCACCTACCCCGAGTCTCACACCATCACCTGAACCCAGTCTCCCTCCATTGCCCGAACCCAGCCTATCCCCATCACCCGCTCCAGCGCCTCTACTTCCTAATCCTCTTTCTCCTCCTTTGTCACCGGCCTCATTTTTCCCAAAACTGACACCGCCAGCAGCTGCAGACATTTCTGCTCCTCCATCTTCTGACACGAACGGGAAGGAAGATAACCATATTATAACTATATCGGTGATATTTATAGCTGCAGCATTGTTCTTTTTATGCTTTCGTAAGGCTGGCCGGCTTAGACAAAATGATGAGAGGCCCTTGCTCAGCTTGAGCATGAATGACTATTCTTTTGGTCCTTCCAATCATGCTTTTGGAAATACGACAAAAGGGGAGAAGCTTGGATTTCAGTCATCAAGTAATAATTTAGGAGACAACAAGAAGACCTCACTGCAAGGAAATCAATCGATGGGAGCTTTTACTGCTGTCGGATCGCCATTTGAATTGAATCCTCCTCCTGGGAGAGTGGGAACTATCCATTCTGGAATGCCACCTTTAAGACCTCCTCCAGGCAGGATGAATCCTCTTCCCCATGAGCCGCCTTCGTTTACACCTTTTGGTAATACTGTCGTCTCTACTGCTGCACCTCCTCCTCCTCGACAGTCTGGTGTTGCTAGTGCTCGACCTCCTACTACTCCTTCACCACCACAATCAATACTAGCTGGTGCCAAACCTGTTCCTCCTCGCCCTCCACTACACCCTGCTCCACCTGGTGCCAAACCTAGTCCTCCACCACCCCCTGCACCACTTGGTGCCAAACCCGGTCCTCCTCCCCCACCACCCCCTGCACCACCTGGTGCCAAACCCGGTCCTCCTCCCCCACCACCGCCAGCACCATCTGGTGCTAAACCTGGTCCTCGTCCACCTCCTCCTCCTCCTAAGAGTGGTGGAGCTCCTCCTCGACCTCCACCAAAAGCTACAGAGAATGCTGAAGCAGGTGCAGAAGGTGGAGCTGATACTTCTAAAGCCAAACTAAAGCCATTTTTCTGGGATAAGGTTCCAGCTAATTCAAATCAATCAATGGTTTGGAATCAGATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGTTATAATGCTGTGAATAAGTCCAATGGTCAACGGCAGAAGGAGTCTTCCTCCTCCCAAGACCCTTCACCTCAATATATCCAGATCGTCGACAAAAAGAAAGCACAAAATTTATTAATTCTGTTGCGCGCATTGAACGTGACGATGGAAGAAGTTTGTGATGCACTTTATGAAGGAAATGAGCTACCGTCGGAATTCCTTCAAACCTTGTTGAAGATGGCACCGACATCAGACGAAGAACTTAAGCTTAGACTTTTTAATGGCGATCTGTCTCAACTTGGGCCTGCTGACCGTTTCCTGAAAGCCATGGTGGACATTCCCTCTGCGTTTAAGCGAATGGAAGTACTGCTTTTTATGTGTACATTTAAAGAGGAGCTCACTACTACTATGGAGTCCTTTGCAGTTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTCCACAAACTTCTTGAAGCTGTTCTCAAAACTGGTAACCGTATGAACGATGGAACATACCGTGGTGGTGCACAAGCATTTAAACTTGATACACTCTTGAAATTATCTGATGTAAAAGGAACAGACGGCAAGACTACACTCTTACACTTTGTTGTTCAAGAGATTATCCGCTCTGAGGGCATAAAAGCTGCTCGAGCGGCGAAAGAGAGCCAAAGTTTGTCTAATATTAAAACGGACGAGCTTCATGAAACAGAAGACCACTATCGCGAGCTTGGTCTTGAGATGGTTTCACACTTGAGCACTGAGCTTGCTAATGTTAAAAGAGGATCTGTTCTAGACGCCGACAGCTTAACAGCAACTGCTGCCAAACTTGGCCACGGTCTTGTGAAAGCCAAAGATATACTAAACAAAAACCTGAAGAATGTTGAGGACGATAGAGGGTTTTGTGAGACAGTGGAAAGTTTTGTCAAGAACGCTGAGGCTGATGTTAAGAAACTGCTTGAAGATGAGAAGAAAATCATGGCTCTGGTGAAGAGCACGGGCGATTACTTTCACGGGAATGCTGCGAAGGATGATGGCTTGCGATTGTTTGTAGTAGTAAGAGACTTCTTGATAATGCTGGATAAAGTATGTAAGGAAGTGAGAGATGCACAAAAGAAGCCAGCAAAACCTATAAAACAAGAAACTTCACGAGGACCGTCTTCGTCCGATACACGCCCATCACCTTCTGATTTTCGTCAGCGGCTTTTTCCAGCTATAGCTGAAAGGAGGATAGATTATGTTAGTTCAGACGAGGAGAGTCCATAG
Protein sequence

>Msa0650080

MGIERYMVVIKFSFCVLLVLQLVAAVSSIEKKETQDGFVRQLFDSASGLLDEHTAKVFRTTCCEDFIHLKKEDEYHDLCLLLELFAGTNKVSSTVRPVAQADIQKLLNACHPQIKEIFLHCKEDDSKIWHVTNTGYLFSTSSIPRRNPGRVLLQLISEPPGPAVGSPTPSLTPSPEPSLPPLPEPSLSPSPAPAPLLPNPLSPPLSPASFFPKLTPPAAADISAPPSSDTNGKEDNHIITISVIFIAAALFFLCFRKAGRLRQNDERPLLSLSMNDYSFGPSNHAFGNTTKGEKLGFQSSSNNLGDNKKTSLQGNQSMGAFTAVGSPFELNPPPGRVGTIHSGMPPLRPPPGRMNPLPHEPPSFTPFGNTVVSTAAPPPPRQSGVASARPPTTPSPPQSILAGAKPVPPRPPLHPAPPGAKPSPPPPPAPLGAKPGPPPPPPPAPPGAKPGPPPPPPPAPSGAKPGPRPPPPPPKSGGAPPRPPPKATENAEAGAEGGADTSKAKLKPFFWDKVPANSNQSMVWNQIKSGSFQFNEEMIETLFGYNAVNKSNGQRQKESSSSQDPSPQYIQIVDKKKAQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEELKLRLFNGDLSQLGPADRFLKAMVDIPSAFKRMEVLLFMCTFKEELTTTMESFAVLEVACKELRNSRLFHKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAAKESQSLSNIKTDELHETEDHYRELGLEMVSHLSTELANVKRGSVLDADSLTATAAKLGHGLVKAKDILNKNLKNVEDDRGFCETVESFVKNAEADVKKLLEDEKKIMALVKSTGDYFHGNAAKDDGLRLFVVVRDFLIMLDKVCKEVRDAQKKPAKPIKQETSRGPSSSDTRPSPSDFRQRLFPAIAERRIDYVSSDEESP*