Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650990 | XP_013456788.1 | 96.118 | 644 | 17 | 2 | 1 | 636 | 1 | 644 | 0.0 | 1250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650990 | sp|Q9FM96|PSL4_ARATH | 57.143 | 637 | 235 | 13 | 21 | 636 | 28 | 647 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610290 | Msa0650990 | 0.828263 | 9.908018e-55 | -8.615850e-47 |
| Msa0650990 | Msa0930770 | 0.809773 | 1.603297e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650990 | MtrunA17_Chr4g0043321 | 96.118 | 644 | 17 | 2 | 1 | 636 | 1 | 644 | 0.0 | 1250 |
| Msa0650990 | MtrunA17_Chr4g0040841 | 60.656 | 122 | 47 | 1 | 11 | 132 | 8 | 128 | 2.23e-44 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650990 | AT5G56360.1 | 57.143 | 637 | 235 | 13 | 21 | 636 | 28 | 647 | 0.0 | 619 |
| Msa0650990 | AT2G42390.1 | 60.484 | 124 | 44 | 2 | 7 | 130 | 6 | 124 | 2.80e-49 | 171 |
Find 194 sgRNAs with CRISPR-Local
Find 579 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAACTCATCACGGCTTTC+TGG | 0.130781 | 4_3:+58278885 | None:intergenic |
| ACCCCAACCAATACCAAATT+TGG | 0.133404 | 4_3:+58278697 | None:intergenic |
| AACTCATTCTAACCAAAATT+TGG | 0.181117 | 4_3:+58278436 | None:intergenic |
| CCAGCCTCCCAGCATGTATT+TGG | 0.202598 | 4_3:+58285048 | None:intergenic |
| GAGATTCTAAAACCAAATTT+TGG | 0.212338 | 4_3:-58278448 | Msa0650990:three_prime_UTR |
| TACTAGAGCTTACCCAAATT+TGG | 0.239918 | 4_3:-58278710 | Msa0650990:three_prime_UTR |
| TGACAAAACTGGTACGAATT+TGG | 0.243728 | 4_3:-58286644 | Msa0650990:five_prime_UTR |
| GGCCATTCCACCACCCGTTT+GGG | 0.243752 | 4_3:-58279997 | Msa0650990:CDS |
| AAAGAAGAAAGTATACTTAA+AGG | 0.252920 | 4_3:-58284895 | Msa0650990:CDS |
| ATAAAGATCTCCTTTGAAAA+TGG | 0.255299 | 4_3:+58278511 | None:intergenic |
| GATTCCGAGGAATGGGTCTT+TGG | 0.265562 | 4_3:+58286386 | None:intergenic |
| ATTTGGTATTGGTTGGGGTT+AGG | 0.289117 | 4_3:-58278693 | Msa0650990:three_prime_UTR |
| TCCTGGCTAGCCTGTTTATA+GGG | 0.289800 | 4_3:+58280024 | None:intergenic |
| ACCCAAATTTGGTATTGGTT+GGG | 0.290054 | 4_3:-58278699 | Msa0650990:three_prime_UTR |
| ACTAGGAGCGTGTTTGGCTT+TGG | 0.297811 | 4_3:-58278659 | Msa0650990:three_prime_UTR |
| AATTCCTGTATCTTCTTCAT+TGG | 0.303497 | 4_3:+58284031 | None:intergenic |
| CTAGGAGCGTGTTTGGCTTT+GGG | 0.307074 | 4_3:-58278658 | Msa0650990:three_prime_UTR |
| GAGGAATGGGTCTTTGGGTT+TGG | 0.310876 | 4_3:+58286392 | None:intergenic |
| AAGAAGAAAGTATACTTAAA+GGG | 0.318461 | 4_3:-58284894 | Msa0650990:CDS |
| AATGAATAAAACTCCTTTGC+TGG | 0.318818 | 4_3:+58280219 | None:intergenic |
| GGGCCATTCCACCACCCGTT+TGG | 0.326302 | 4_3:-58279998 | Msa0650990:CDS |
| TTTGGTATTGGTTGGGGTTA+GGG | 0.326745 | 4_3:-58278692 | Msa0650990:three_prime_UTR |
| GCTCTAGTATACAAAACTTA+AGG | 0.330616 | 4_3:+58278724 | None:intergenic |
| TGAGGATTCATACAAAATAA+TGG | 0.332168 | 4_3:-58279819 | Msa0650990:CDS |
| CTCCTGGCTAGCCTGTTTAT+AGG | 0.335387 | 4_3:+58280023 | None:intergenic |
| CAGCCTCCCAGCATGTATTT+GGG | 0.344775 | 4_3:+58285049 | None:intergenic |
| TTTCTAATGGTGATCATTGC+TGG | 0.357080 | 4_3:-58279793 | Msa0650990:CDS |
| TCTGAAACTGATTTGACAAC+TGG | 0.358865 | 4_3:-58283204 | Msa0650990:CDS |
| CTCTAGTATACAAAACTTAA+GGG | 0.365596 | 4_3:+58278725 | None:intergenic |
| TCCTTATGTCTCATCTGGTT+TGG | 0.367667 | 4_3:-58278628 | Msa0650990:three_prime_UTR |
| GGGAGTCCTTATGTCTCATC+TGG | 0.368488 | 4_3:-58278633 | Msa0650990:three_prime_UTR |
| ATCTGTATGGAATATTATTC+AGG | 0.371491 | 4_3:-58280564 | Msa0650990:CDS |
| AGCTTACCCAAATTTGGTAT+TGG | 0.373421 | 4_3:-58278704 | Msa0650990:three_prime_UTR |
| CCTAGGACTAGGAGCGTGTT+TGG | 0.377315 | 4_3:-58278665 | Msa0650990:three_prime_UTR |
| TTACTCAGTTATTAATTGTA+AGG | 0.379705 | 4_3:+58286725 | None:intergenic |
| TATATCTTCGTCATATTTGC+CGG | 0.384323 | 4_3:+58280800 | None:intergenic |
| AAACTCAAATGAATCTTAAC+TGG | 0.386832 | 4_3:-58278861 | Msa0650990:intron |
| ATTAATAACTGAGTAATATC+AGG | 0.388048 | 4_3:-58286718 | Msa0650990:five_prime_UTR |
| CCCAAATTTGGTATTGGTTG+GGG | 0.391746 | 4_3:-58278698 | Msa0650990:three_prime_UTR |
| AGCGTGTTTGGCTTTGGGTT+GGG | 0.393248 | 4_3:-58278653 | Msa0650990:three_prime_UTR |
| ATTCCGAGGAATGGGTCTTT+GGG | 0.400938 | 4_3:+58286387 | None:intergenic |
| TTTCTTCCTGACAAAGGGCT+GGG | 0.402523 | 4_3:+58279036 | None:intergenic |
| CATACCTTCAAACTCCTATC+AGG | 0.404765 | 4_3:+58279764 | None:intergenic |
| CCAAATACATGCTGGGAGGC+TGG | 0.405666 | 4_3:-58285048 | Msa0650990:CDS |
| CTGACTGATTCACGGGTGTC+TGG | 0.405932 | 4_3:+58280528 | None:intergenic |
| CTACGCAGATACCGTATTGA+TGG | 0.406515 | 4_3:+58283158 | None:intergenic |
| AGAGGGCTCTCCGGTTGATC+AGG | 0.406967 | 4_3:-58283934 | Msa0650990:intron |
| CAAAGTCTGCCCCTATAAAC+AGG | 0.407002 | 4_3:-58280034 | Msa0650990:CDS |
| GCGACAGAAACGTCCCGTTA+TGG | 0.411468 | 4_3:+58286541 | None:intergenic |
| GAGCGTGTTTGGCTTTGGGT+TGG | 0.414636 | 4_3:-58278654 | Msa0650990:three_prime_UTR |
| CAAGCTAGACCTACTGAATT+CGG | 0.417093 | 4_3:-58278913 | Msa0650990:CDS |
| TTCATTGTCTAATGCAGTGT+TGG | 0.417389 | 4_3:+58280917 | None:intergenic |
| TGGTGGAATGGCCCTCCTCC+TGG | 0.417770 | 4_3:+58280007 | None:intergenic |
| AGCAATTGAACACGCACATT+TGG | 0.418179 | 4_3:-58284956 | Msa0650990:CDS |
| CCAGGTTCATCGGTGCCATC+GGG | 0.421592 | 4_3:+58286170 | None:intergenic |
| TACAATCGAACCTGATCAAC+CGG | 0.423911 | 4_3:+58283924 | None:intergenic |
| TACCAAAACCTTACCCCAAA+CGG | 0.426842 | 4_3:+58279983 | None:intergenic |
| CCCCAACCAATACCAAATTT+GGG | 0.434768 | 4_3:+58278698 | None:intergenic |
| CCCCTATAAACAGGCTAGCC+AGG | 0.438029 | 4_3:-58280025 | Msa0650990:CDS |
| CTGATCTTTGTTGAAATTAG+CGG | 0.439746 | 4_3:+58286217 | None:intergenic |
| CTTGTTGCTTCACGTTGGAC+AGG | 0.441661 | 4_3:-58280969 | Msa0650990:CDS |
| AGGATCCTTGTTTGATAAAG+TGG | 0.441971 | 4_3:-58283400 | Msa0650990:CDS |
| TTAAAATCACAACGACTACT+TGG | 0.445169 | 4_3:-58278562 | Msa0650990:three_prime_UTR |
| TACCCAAATTTGGTATTGGT+TGG | 0.448904 | 4_3:-58278700 | Msa0650990:three_prime_UTR |
| AGCCACCCCAGCCCTTTGTC+AGG | 0.449068 | 4_3:-58279042 | Msa0650990:CDS |
| GGGGTTGTGAAACAGTTAAA+AGG | 0.449128 | 4_3:-58284874 | Msa0650990:intron |
| CAGGCGCTGGGACAAATTTG+AGG | 0.449184 | 4_3:-58279837 | Msa0650990:CDS |
| ACCAGGTTCATCGGTGCCAT+CGG | 0.449789 | 4_3:+58286169 | None:intergenic |
| GAGAGTGAACCAGACTTGTC+AGG | 0.450153 | 4_3:-58280714 | Msa0650990:intron |
| AATAGACAAGGCTGAGGAAA+AGG | 0.453522 | 4_3:-58284129 | Msa0650990:CDS |
| ATCTCCTTTGAAAATGGAAC+GGG | 0.456810 | 4_3:+58278517 | None:intergenic |
| GGTGTCATCGTCATATTTGC+CGG | 0.457149 | 4_3:+58280821 | None:intergenic |
| ATTGCTGGAACGGTCCTGAT+AGG | 0.460707 | 4_3:-58279778 | Msa0650990:CDS |
| AAAAGAAGAGAAACAGAAGA+AGG | 0.462480 | 4_3:-58284090 | Msa0650990:CDS |
| TTTAGAAATTGAACAAAAGA+GGG | 0.463031 | 4_3:+58286507 | None:intergenic |
| GAAGAAGGAGGCTGAGGAAA+AGG | 0.463951 | 4_3:-58284075 | Msa0650990:CDS |
| CCCGATGGCACCGATGAACC+TGG | 0.467529 | 4_3:-58286170 | Msa0650990:intron |
| ACTTTCTTATAGGATGAAGC+TGG | 0.469184 | 4_3:-58283480 | Msa0650990:intron |
| ACCAAAACCTTACCCCAAAC+GGG | 0.470971 | 4_3:+58279984 | None:intergenic |
| AGAAAATACAGAAATCTGTA+TGG | 0.474370 | 4_3:-58280577 | Msa0650990:CDS |
| GGGGAGCGATTCCGAGGAAT+GGG | 0.478435 | 4_3:+58286379 | None:intergenic |
| CCAAACACGCTCCTAGTCCT+AGG | 0.479154 | 4_3:+58278665 | None:intergenic |
| ACCTTACCCCAAACGGGTGG+TGG | 0.480378 | 4_3:+58279990 | None:intergenic |
| TGCATTAGACAATGAAGATC+AGG | 0.480617 | 4_3:-58280910 | Msa0650990:CDS |
| TGGGGAGCGATTCCGAGGAA+TGG | 0.481598 | 4_3:+58286378 | None:intergenic |
| ACCCCAAACGGGTGGTGGAA+TGG | 0.481723 | 4_3:+58279995 | None:intergenic |
| TGAGAAAATTGAAGTTAAAG+AGG | 0.483030 | 4_3:-58283952 | Msa0650990:CDS |
| TATAACAAACCTGACAAGTC+TGG | 0.483214 | 4_3:+58280705 | None:intergenic |
| AAAACCAATGAAGAAGATAC+AGG | 0.483963 | 4_3:-58284035 | Msa0650990:CDS |
| GTTAGGGAGCTCCTAGGACT+AGG | 0.486760 | 4_3:-58278676 | Msa0650990:three_prime_UTR |
| GTTTAGAAATTGAACAAAAG+AGG | 0.488040 | 4_3:+58286506 | None:intergenic |
| TTCTTCCTGACAAAGGGCTG+GGG | 0.488589 | 4_3:+58279037 | None:intergenic |
| CTCTTCCACTTTATCAAACA+AGG | 0.488744 | 4_3:+58283395 | None:intergenic |
| CTTTCTTATAGGATGAAGCT+GGG | 0.488948 | 4_3:-58283479 | Msa0650990:intron |
| CTTGTTTGATAAAGTGGAAG+AGG | 0.495036 | 4_3:-58283394 | Msa0650990:intron |
| CAAATACATGCTGGGAGGCT+GGG | 0.498891 | 4_3:-58285047 | Msa0650990:CDS |
| CTGGTTGTTCCGAATTCAGT+AGG | 0.499226 | 4_3:+58278904 | None:intergenic |
| TTCCTGACAAAGGGCTGGGG+TGG | 0.501335 | 4_3:+58279040 | None:intergenic |
| CAAAGTGCCCAAATACATGC+TGG | 0.502257 | 4_3:-58285056 | Msa0650990:CDS |
| CAGATTTGTATGAGGAACTA+AGG | 0.503712 | 4_3:+58280742 | None:intergenic |
| TGAACACGCACATTTGGCTC+TGG | 0.506028 | 4_3:-58284950 | Msa0650990:CDS |
| CAGACACCCGTGAATCAGTC+AGG | 0.506973 | 4_3:-58280527 | Msa0650990:intron |
| TGAAGTTAAAGAGGGCTCTC+CGG | 0.513998 | 4_3:-58283943 | Msa0650990:CDS |
| GGTTTGGATGAAGAAGAGAA+TGG | 0.518565 | 4_3:+58286408 | None:intergenic |
| GGATTGTCAAAGGAAGAATT+AGG | 0.518607 | 4_3:-58280996 | Msa0650990:CDS |
| CGCACATTTGGCTCTGGAGA+AGG | 0.520642 | 4_3:-58284944 | Msa0650990:CDS |
| GTTGGGGTTAGGGAGCTCCT+AGG | 0.524754 | 4_3:-58278682 | Msa0650990:three_prime_UTR |
| GAAACAGAAGAAGGAGGCTG+AGG | 0.526794 | 4_3:-58284081 | Msa0650990:CDS |
| TTTGACGCCCTCTTGATATG+TGG | 0.528509 | 4_3:+58284990 | None:intergenic |
| GCACAACAGATGACCCTTCG+TGG | 0.528602 | 4_3:-58280604 | Msa0650990:CDS |
| ATGTCTACCTGACTGATTCA+CGG | 0.529282 | 4_3:+58280520 | None:intergenic |
| AACAGCTAGTATGAAGATCA+TGG | 0.529848 | 4_3:-58278767 | Msa0650990:intron |
| GTTTGGATGAAGAAGAGAAT+GGG | 0.530013 | 4_3:+58286409 | None:intergenic |
| TCCTTCACTTTCAGAATCAG+TGG | 0.530933 | 4_3:+58283419 | None:intergenic |
| GATGTAATAAGATGTAAAGA+TGG | 0.532369 | 4_3:-58286242 | Msa0650990:CDS |
| AATCCCTACTCGCAACGGCT+TGG | 0.532996 | 4_3:+58279187 | None:intergenic |
| CGGTCCTGATAGGAGTTTGA+AGG | 0.533208 | 4_3:-58279768 | Msa0650990:intron |
| GATACGCTAGTGTCCATAAC+GGG | 0.535879 | 4_3:-58286554 | Msa0650990:five_prime_UTR |
| GAAGCATCTGAGAATACTGA+TGG | 0.537435 | 4_3:-58281017 | Msa0650990:CDS |
| TGTCTACCTGACTGATTCAC+GGG | 0.537621 | 4_3:+58280521 | None:intergenic |
| GATTTCTGCGATTGCCCCGA+TGG | 0.539680 | 4_3:-58286185 | Msa0650990:CDS |
| ACAAATAATGAAGAGAATGA+AGG | 0.542197 | 4_3:-58280870 | Msa0650990:CDS |
| TTCTGATGAAGCCATCAATA+CGG | 0.542935 | 4_3:-58283169 | Msa0650990:intron |
| AGAAGAAAGTATACTTAAAG+GGG | 0.543603 | 4_3:-58284893 | Msa0650990:CDS |
| GGGTGTCTGGAATATATTGA+CGG | 0.546399 | 4_3:+58280541 | None:intergenic |
| TTTGGTGATGATCTTGAATG+AGG | 0.553083 | 4_3:-58286626 | Msa0650990:five_prime_UTR |
| CGAGTCAATGATGGAATTTG+CGG | 0.553365 | 4_3:-58285989 | Msa0650990:intron |
| AGAATTGAAACCAGGTTCAT+CGG | 0.554450 | 4_3:+58286160 | None:intergenic |
| CTTTGGTATTGCAGGTACAT+CGG | 0.554528 | 4_3:-58286077 | Msa0650990:intron |
| CGAGACGAAAACAGAGACAC+AGG | 0.554823 | 4_3:+58286010 | None:intergenic |
| TAAACAGGCTAGCCAGGAGG+AGG | 0.555074 | 4_3:-58280019 | Msa0650990:CDS |
| TTATGTTTAGATTGCTGTGA+TGG | 0.562355 | 4_3:-58285102 | Msa0650990:intron |
| GCCAAACCAGATGAGACATA+AGG | 0.563949 | 4_3:+58278627 | None:intergenic |
| TGTCAAAGGAAGAATTAGGC+AGG | 0.563992 | 4_3:-58280992 | Msa0650990:CDS |
| CTCAACGTCAGATTTGTATG+AGG | 0.565568 | 4_3:+58280734 | None:intergenic |
| AACAGGTCAAGCTAAAATGC+GGG | 0.566211 | 4_3:-58279240 | Msa0650990:intron |
| AAATGGAACGGGCAATCTGA+AGG | 0.566678 | 4_3:+58278528 | None:intergenic |
| GAGAAAATTGAAGTTAAAGA+GGG | 0.567079 | 4_3:-58283951 | Msa0650990:CDS |
| GAATGCAAAAGAAGCTGAGA+GGG | 0.568138 | 4_3:-58283241 | Msa0650990:CDS |
| CACACTAGAACGGTATAAGA+TGG | 0.568632 | 4_3:+58278368 | None:intergenic |
| AATGGTGATCATTGCTGGAA+CGG | 0.578500 | 4_3:-58279788 | Msa0650990:CDS |
| GGAAAAGGAGCGTTTACAGA+AGG | 0.581537 | 4_3:-58284114 | Msa0650990:CDS |
| CGTTGGACAGGAGAAGATGT+TGG | 0.584656 | 4_3:-58280957 | Msa0650990:CDS |
| AACCTTGGGGAGCGATTCCG+AGG | 0.585592 | 4_3:+58286373 | None:intergenic |
| TTTGGCTCTGGAGAAGGATG+AGG | 0.585737 | 4_3:-58284938 | Msa0650990:CDS |
| GCAGGCTTGTTGCTTCACGT+TGG | 0.589123 | 4_3:-58280974 | Msa0650990:CDS |
| AAACGATGAAGAATTTCAAG+AGG | 0.591771 | 4_3:-58280778 | Msa0650990:CDS |
| GCCATTCCACCACCCGTTTG+GGG | 0.596501 | 4_3:-58279996 | Msa0650990:intron |
| GAATACTGATGGATTGTCAA+AGG | 0.597321 | 4_3:-58281006 | Msa0650990:CDS |
| AAACCCAAAGACCCATTCCT+CGG | 0.598704 | 4_3:-58286390 | Msa0650990:CDS |
| GATCTCCTTTGAAAATGGAA+CGG | 0.604030 | 4_3:+58278516 | None:intergenic |
| TAGAAATTGAACAAAAGAGG+GGG | 0.604122 | 4_3:+58286509 | None:intergenic |
| CCTGGCTAGCCTGTTTATAG+GGG | 0.604222 | 4_3:+58280025 | None:intergenic |
| TACAGGAATTGAAAATGAAG+CGG | 0.607388 | 4_3:-58284018 | Msa0650990:CDS |
| AAAGTGCCCAAATACATGCT+GGG | 0.607920 | 4_3:-58285055 | Msa0650990:CDS |
| GAACAGGTCAAGCTAAAATG+CGG | 0.608720 | 4_3:-58279241 | Msa0650990:intron |
| AACTGATTTGACAACTGGAA+AGG | 0.613288 | 4_3:-58283199 | Msa0650990:CDS |
| ATAACAATCCCTACTCGCAA+CGG | 0.613583 | 4_3:+58279182 | None:intergenic |
| AAAGATTGCCACATATCAAG+AGG | 0.614060 | 4_3:-58284998 | Msa0650990:CDS |
| GGCAAATATGACGATGACAC+CGG | 0.616567 | 4_3:-58280819 | Msa0650990:CDS |
| TTCCTCGGAATCGCTCCCCA+AGG | 0.616903 | 4_3:-58286375 | Msa0650990:intron |
| AGAAGAGAAACAGAAGAAGG+AGG | 0.617934 | 4_3:-58284087 | Msa0650990:CDS |
| GCCACTGATTCTGAAAGTGA+AGG | 0.619286 | 4_3:-58283420 | Msa0650990:CDS |
| ACGCGAGGAGAAGAGAAATG+AGG | 0.624983 | 4_3:+58286439 | None:intergenic |
| AGAACAAATAGACAAGGCTG+AGG | 0.625081 | 4_3:-58284135 | Msa0650990:CDS |
| AGATGCTGCTCGTATACGCA+AGG | 0.627154 | 4_3:-58280429 | Msa0650990:CDS |
| GTCTAGGAATCACACTAGAA+CGG | 0.628998 | 4_3:+58278358 | None:intergenic |
| TCTGAAACTGACGACGACAC+CGG | 0.629370 | 4_3:-58280840 | Msa0650990:CDS |
| CAATGCTACAGGTCCAGCAA+AGG | 0.629416 | 4_3:-58280232 | Msa0650990:intron |
| CTAGACTGCAAAATACTAGA+CGG | 0.629562 | 4_3:-58278475 | Msa0650990:three_prime_UTR |
| AGAAATTGAACAAAAGAGGG+GGG | 0.629996 | 4_3:+58286510 | None:intergenic |
| CGATACGCTAGTGTCCATAA+CGG | 0.632084 | 4_3:-58286555 | Msa0650990:five_prime_UTR |
| GAGACGAAAACAGAGACACA+GGG | 0.636956 | 4_3:+58286011 | None:intergenic |
| TTTCTCATGAATACTTGCCG+CGG | 0.637229 | 4_3:+58283968 | None:intergenic |
| TTAGAAATTGAACAAAAGAG+GGG | 0.637796 | 4_3:+58286508 | None:intergenic |
| GATGGAAGTGATGAATATGA+TGG | 0.639953 | 4_3:-58285084 | Msa0650990:CDS |
| ATCAGTTTCAGATTCAACAG+TGG | 0.643721 | 4_3:+58283215 | None:intergenic |
| TTTCTTATAGGATGAAGCTG+GGG | 0.646594 | 4_3:-58283478 | Msa0650990:intron |
| CACAACGACTACTTGGTCTG+TGG | 0.652524 | 4_3:-58278555 | Msa0650990:three_prime_UTR |
| TTGTCAGGAAGAAAAGCTGA+AGG | 0.652990 | 4_3:-58279027 | Msa0650990:intron |
| AAGATTGCCACATATCAAGA+GGG | 0.666614 | 4_3:-58284997 | Msa0650990:CDS |
| GGTACATCGGCGTGTCCGCG+TGG | 0.670391 | 4_3:-58286064 | Msa0650990:CDS |
| AAACAGGCTAGCCAGGAGGA+GGG | 0.674511 | 4_3:-58280018 | Msa0650990:CDS |
| ATCAGGAAGATATTCTACAC+GGG | 0.675112 | 4_3:-58280893 | Msa0650990:CDS |
| GATCAGGAAGATATTCTACA+CGG | 0.678925 | 4_3:-58280894 | Msa0650990:CDS |
| AGAATGCAAAAGAAGCTGAG+AGG | 0.679629 | 4_3:-58283242 | Msa0650990:CDS |
| AAAACCTTACCCCAAACGGG+TGG | 0.683329 | 4_3:+58279987 | None:intergenic |
| TCATAAAGAACAAATAGACA+AGG | 0.689258 | 4_3:-58284141 | Msa0650990:CDS |
| CTATAAACAGGCTAGCCAGG+AGG | 0.720671 | 4_3:-58280022 | Msa0650990:CDS |
| AGACATCAAAGACAATTCCG+CGG | 0.722504 | 4_3:-58283985 | Msa0650990:CDS |
| CAGGTTCATCGGTGCCATCG+GGG | 0.723293 | 4_3:+58286171 | None:intergenic |
| GTGCCCAAATACATGCTGGG+AGG | 0.724802 | 4_3:-58285052 | Msa0650990:CDS |
| AGAATGGGACGAGAAACGCG+AGG | 0.754935 | 4_3:+58286424 | None:intergenic |
| AGACGAAAACAGAGACACAG+GGG | 0.769467 | 4_3:+58286012 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTGTACTTTTTA+AGG | - | chr4_3:58282478-58282497 | Msa0650990:intron | 10.0% |
| !!! | ATAAATTTTAAAACATTGTT+AGG | - | chr4_3:58282980-58282999 | Msa0650990:intron | 10.0% |
| !! | AGATAAAAATGTGTAAAAAA+TGG | + | chr4_3:58278578-58278597 | None:intergenic | 15.0% |
| !!! | ACTTCTAAATTTTTAAGTAT+AGG | + | chr4_3:58279242-58279261 | None:intergenic | 15.0% |
| !!! | TTACTTTTTGACATTAATTT+TGG | - | chr4_3:58279294-58279313 | Msa0650990:intron | 15.0% |
| !!! | ATAATAGATTTATTTTGCAT+TGG | - | chr4_3:58280244-58280263 | Msa0650990:intron | 15.0% |
| !! | AAAAAGTTTCATGTATAAAT+AGG | + | chr4_3:58282843-58282862 | None:intergenic | 15.0% |
| !! | GAGTCTAATAAAAAAAATTA+AGG | + | chr4_3:58283014-58283033 | None:intergenic | 15.0% |
| !!! | GGTGTTTATTTATTTTAAAT+TGG | + | chr4_3:58283036-58283055 | None:intergenic | 15.0% |
| !!! | AGTATAAAGATATCAAATTT+TGG | - | chr4_3:58283656-58283675 | Msa0650990:intron | 15.0% |
| !! | TTAATTCAAATGTTTATCAA+AGG | - | chr4_3:58284233-58284252 | Msa0650990:intron | 15.0% |
| !! | TAATTCAAATGTTTATCAAA+GGG | - | chr4_3:58284234-58284253 | Msa0650990:intron | 15.0% |
| !! | ATTGTATCTATTCATTAAAA+CGG | - | chr4_3:58285226-58285245 | Msa0650990:intron | 15.0% |
| !! | CTAAAGTAATTATATTCATT+TGG | - | chr4_3:58285330-58285349 | Msa0650990:intron | 15.0% |
| !!! | TGTAATTTTTTTTTATGAAG+TGG | - | chr4_3:58285621-58285640 | Msa0650990:intron | 15.0% |
| !!! | ATTATTAATTTTAGATGAAG+TGG | - | chr4_3:58286505-58286524 | Msa0650990:five_prime_UTR | 15.0% |
| !! | AACAAAATATAAAAAAGTCT+AGG | + | chr4_3:58286573-58286592 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTTTGTTTGCA+TGG | - | chr4_3:58286577-58286596 | Msa0650990:five_prime_UTR | 15.0% |
| !! | ATTAATAACTGAGTAATATC+AGG | - | chr4_3:58278194-58278213 | Msa0650990:three_prime_UTR | 20.0% |
| !! | TTTAGAAATTGAACAAAAGA+GGG | + | chr4_3:58278408-58278427 | None:intergenic | 20.0% |
| !!! | AACACTCAATATGTTTTTAT+TGG | - | chr4_3:58279271-58279290 | Msa0650990:intron | 20.0% |
| !!! | TTTTTTGCAAACACAAATTA+AGG | - | chr4_3:58279354-58279373 | Msa0650990:intron | 20.0% |
| !!! | TTTTACTTTGTTATTTTCTC+TGG | - | chr4_3:58279406-58279425 | Msa0650990:intron | 20.0% |
| !!! | AAAGAAGAAAGTATACTTAA+AGG | - | chr4_3:58280017-58280036 | Msa0650990:CDS | 20.0% |
| !!! | AAGAAGAAAGTATACTTAAA+GGG | - | chr4_3:58280018-58280037 | Msa0650990:CDS | 20.0% |
| !!! | TATCCTTTAAGACAAAATTA+AGG | + | chr4_3:58280122-58280141 | None:intergenic | 20.0% |
| !!! | CTGTCAATTTTTTTTTTCTA+TGG | + | chr4_3:58280179-58280198 | None:intergenic | 20.0% |
| !! | TAGAATAAAACACTTCAATA+AGG | + | chr4_3:58281058-58281077 | None:intergenic | 20.0% |
| !! | ACATACTTGCTTATTTAAAT+AGG | + | chr4_3:58281209-58281228 | None:intergenic | 20.0% |
| !! | AACATTGAAAACTTTCTTAT+AGG | - | chr4_3:58281422-58281441 | Msa0650990:intron | 20.0% |
| !! | AAAATCAAGTAAAAATGTTG+AGG | + | chr4_3:58281640-58281659 | None:intergenic | 20.0% |
| !!! | TATTTATCGAGTATTTTTCT+TGG | - | chr4_3:58282061-58282080 | Msa0650990:intron | 20.0% |
| !! | CAGATTTAAACAAAATGAAA+AGG | - | chr4_3:58282204-58282223 | Msa0650990:intron | 20.0% |
| !! | TTAAACAAAATGAAAAGGAA+TGG | - | chr4_3:58282209-58282228 | Msa0650990:intron | 20.0% |
| !!! | ACAAATATTTAAAACAGTCA+GGG | + | chr4_3:58282409-58282428 | None:intergenic | 20.0% |
| !!! | TAATAAGTTTTTCGATTTTG+AGG | + | chr4_3:58282595-58282614 | None:intergenic | 20.0% |
| !!! | TTATTTTGAGTTCAATTTCT+TGG | + | chr4_3:58282688-58282707 | None:intergenic | 20.0% |
| !! | ATTTATACACAAACATTGAT+AGG | + | chr4_3:58282966-58282985 | None:intergenic | 20.0% |
| !!! | ATAAAGATATCAAATTTTGG+CGG | - | chr4_3:58283659-58283678 | Msa0650990:intron | 20.0% |
| !! | AAAAAACATCAATGAAAAGT+GGG | + | chr4_3:58283836-58283855 | None:intergenic | 20.0% |
| !!! | TTTTATATTCTCTGTAAAAG+AGG | - | chr4_3:58285028-58285047 | Msa0650990:CDS | 20.0% |
| !!! | AAAATAATGGTGTTTTCTAA+TGG | - | chr4_3:58285106-58285125 | Msa0650990:intron | 20.0% |
| !! | TTAACTCTTAAGAAAAAACA+TGG | + | chr4_3:58285389-58285408 | None:intergenic | 20.0% |
| !!! | TATTTTTTACGAGAAATGTA+AGG | + | chr4_3:58285515-58285534 | None:intergenic | 20.0% |
| !!! | TAATTAAATTGACTAGTTTG+TGG | - | chr4_3:58285546-58285565 | Msa0650990:intron | 20.0% |
| !!! | AATTAAATTGACTAGTTTGT+GGG | - | chr4_3:58285547-58285566 | Msa0650990:intron | 20.0% |
| !! | AAAAAATTGTTGAAAAAGGT+TGG | + | chr4_3:58286649-58286668 | None:intergenic | 20.0% |
| !!! | AACCTTTTTCAACAATTTTT+TGG | - | chr4_3:58286648-58286667 | Msa0650990:five_prime_UTR | 20.0% |
| ! | ACATAAAAATCTGACAAAAC+TGG | - | chr4_3:58278257-58278276 | Msa0650990:three_prime_UTR | 25.0% |
| ! | TTAGAAATTGAACAAAAGAG+GGG | + | chr4_3:58278407-58278426 | None:intergenic | 25.0% |
| ! | GTTTAGAAATTGAACAAAAG+AGG | + | chr4_3:58278409-58278428 | None:intergenic | 25.0% |
| ! | GATGTAATAAGATGTAAAGA+TGG | - | chr4_3:58278670-58278689 | Msa0650990:three_prime_UTR | 25.0% |
| ! | TTTGTTTCGTGTTGAATTAT+TGG | - | chr4_3:58278793-58278812 | Msa0650990:intron | 25.0% |
| !! | AAAGTCGGGTTTTTAAATAA+AGG | + | chr4_3:58279126-58279145 | None:intergenic | 25.0% |
| !!! | ATTAATTTTGGTGTAGAAAG+TGG | - | chr4_3:58279306-58279325 | Msa0650990:intron | 25.0% |
| ! | TTGCAAAAAATAAAGTACAC+CGG | + | chr4_3:58279344-58279363 | None:intergenic | 25.0% |
| ! | AATGTAGATACCTAGATATA+TGG | - | chr4_3:58279448-58279467 | Msa0650990:intron | 25.0% |
| ! | GCAACATGACTAAAAATATA+TGG | + | chr4_3:58279560-58279579 | None:intergenic | 25.0% |
| !! | AACACAATACTTTTAGATCA+TGG | + | chr4_3:58279676-58279695 | None:intergenic | 25.0% |
| !! | AGAAGAAAGTATACTTAAAG+GGG | - | chr4_3:58280019-58280038 | Msa0650990:CDS | 25.0% |
| !! | CTACCTTAATTTTGTCTTAA+AGG | - | chr4_3:58280116-58280135 | Msa0650990:intron | 25.0% |
| !!! | TAGATTTATTTTGCATTGGT+AGG | - | chr4_3:58280248-58280267 | Msa0650990:intron | 25.0% |
| ! | TAGGATCAAGTTAATGTATA+AGG | - | chr4_3:58280267-58280286 | Msa0650990:intron | 25.0% |
| ! | ATGTATAAGGAAATCTGATT+AGG | - | chr4_3:58280280-58280299 | Msa0650990:intron | 25.0% |
| ! | CATATGTGTAATTAAACAGT+TGG | + | chr4_3:58280425-58280444 | None:intergenic | 25.0% |
| ! | TTCATCAATTGAGAATAGAT+GGG | + | chr4_3:58280461-58280480 | None:intergenic | 25.0% |
| !!! | AACACTTTCCTTGTTTTAAA+AGG | - | chr4_3:58280567-58280586 | Msa0650990:CDS | 25.0% |
| ! | GTTAAAGAAAGAATTCCATT+TGG | + | chr4_3:58280726-58280745 | None:intergenic | 25.0% |
| ! | TCATAAAGAACAAATAGACA+AGG | - | chr4_3:58280771-58280790 | Msa0650990:CDS | 25.0% |
| ! | TGAGAAAATTGAAGTTAAAG+AGG | - | chr4_3:58280960-58280979 | Msa0650990:CDS | 25.0% |
| ! | GAGAAAATTGAAGTTAAAGA+GGG | - | chr4_3:58280961-58280980 | Msa0650990:CDS | 25.0% |
| ! | CTTGCTTATTTAAATAGGTA+CGG | + | chr4_3:58281204-58281223 | None:intergenic | 25.0% |
| !! | GAAGAGGTGAATAAAATTTT+TGG | - | chr4_3:58281534-58281553 | Msa0650990:intron | 25.0% |
| !! | CTTCAAAATTATTGTTGTTG+AGG | - | chr4_3:58281574-58281593 | Msa0650990:intron | 25.0% |
| ! | TTATATCTAATGAACACACA+TGG | + | chr4_3:58281612-58281631 | None:intergenic | 25.0% |
| ! | TCACTTAATCGACAATTATT+AGG | - | chr4_3:58281858-58281877 | Msa0650990:intron | 25.0% |
| ! | ACAATTATTAGGTCATAATG+AGG | - | chr4_3:58281869-58281888 | Msa0650990:intron | 25.0% |
| !!! | TCATAAAACTGACTTTTCTT+GGG | + | chr4_3:58281938-58281957 | None:intergenic | 25.0% |
| !!! | TCTAGTTTTTATGATATGAC+TGG | + | chr4_3:58281974-58281993 | None:intergenic | 25.0% |
| !! | ATAATCAAGTGCAATTGTTT+TGG | + | chr4_3:58282044-58282063 | None:intergenic | 25.0% |
| ! | AGACTAGATAACGTAATTAT+TGG | + | chr4_3:58282087-58282106 | None:intergenic | 25.0% |
| ! | AAATATTCTGCAATCACTTA+TGG | + | chr4_3:58282113-58282132 | None:intergenic | 25.0% |
| ! | GTTATGTAAATTGCAATCAA+TGG | - | chr4_3:58282355-58282374 | Msa0650990:intron | 25.0% |
| !!! | GCTTTAAACTCTTTTTTACT+GGG | - | chr4_3:58282377-58282396 | Msa0650990:intron | 25.0% |
| !! | CACAAATATTTAAAACAGTC+AGG | + | chr4_3:58282410-58282429 | None:intergenic | 25.0% |
| !!! | TTGTGTTTTGCAATTGATTT+TGG | - | chr4_3:58282425-58282444 | Msa0650990:intron | 25.0% |
| ! | GTAATGTATATAACAGGATA+AGG | + | chr4_3:58282555-58282574 | None:intergenic | 25.0% |
| ! | TTAGCAGAAAAAACATATCA+TGG | - | chr4_3:58282612-58282631 | Msa0650990:intron | 25.0% |
| ! | TTTCATGTATAAATAGGACT+AGG | + | chr4_3:58282837-58282856 | None:intergenic | 25.0% |
| ! | TAAACACCAATCACAAATAA+AGG | - | chr4_3:58283048-58283067 | Msa0650990:intron | 25.0% |
| !!! | ATTTTGATTGATAATGTGCT+AGG | - | chr4_3:58283406-58283425 | Msa0650990:CDS | 25.0% |
| !!! | TTTTGATTGATAATGTGCTA+GGG | - | chr4_3:58283407-58283426 | Msa0650990:CDS | 25.0% |
| ! | GAATTCAATTTGATAGGATT+GGG | + | chr4_3:58283539-58283558 | None:intergenic | 25.0% |
| ! | TGAATTCAATTTGATAGGAT+TGG | + | chr4_3:58283540-58283559 | None:intergenic | 25.0% |
| ! | AATCCTATCAAATTGAATTC+AGG | - | chr4_3:58283539-58283558 | Msa0650990:intron | 25.0% |
| ! | ATCCTATCAAATTGAATTCA+GGG | - | chr4_3:58283540-58283559 | Msa0650990:intron | 25.0% |
| ! | AAAAACATCAATGAAAAGTG+GGG | + | chr4_3:58283835-58283854 | None:intergenic | 25.0% |
| ! | GAAAAAACATCAATGAAAAG+TGG | + | chr4_3:58283837-58283856 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTTTTCTCTTTG+TGG | - | chr4_3:58283848-58283867 | Msa0650990:intron | 25.0% |
| !!! | GTTTTTTCTTTTCTCTTTGT+GGG | - | chr4_3:58283849-58283868 | Msa0650990:intron | 25.0% |
| ! | TGGGTATATACATATCTTTA+GGG | - | chr4_3:58283868-58283887 | Msa0650990:intron | 25.0% |
| ! | ACAAATAATGAAGAGAATGA+AGG | - | chr4_3:58284042-58284061 | Msa0650990:CDS | 25.0% |
| ! | AGAAAATACAGAAATCTGTA+TGG | - | chr4_3:58284335-58284354 | Msa0650990:intron | 25.0% |
| ! | ATCTGTATGGAATATTATTC+AGG | - | chr4_3:58284348-58284367 | Msa0650990:intron | 25.0% |
| ! | ACAAATATTATTTGTCCAGA+TGG | - | chr4_3:58284428-58284447 | Msa0650990:intron | 25.0% |
| !! | CAAAAGCAAAAACTTGATTT+TGG | - | chr4_3:58284565-58284584 | Msa0650990:intron | 25.0% |
| !! | AACAGAAAGTAAACTTTTAG+GGG | + | chr4_3:58284768-58284787 | None:intergenic | 25.0% |
| !! | CAACAGAAAGTAAACTTTTA+GGG | + | chr4_3:58284769-58284788 | None:intergenic | 25.0% |
| !! | ACAACAGAAAGTAAACTTTT+AGG | + | chr4_3:58284770-58284789 | None:intergenic | 25.0% |
| !! | TAATTCAGTTTTCTTTTCAC+AGG | - | chr4_3:58285056-58285075 | Msa0650990:CDS | 25.0% |
| ! | TGAGGATTCATACAAAATAA+TGG | - | chr4_3:58285093-58285112 | Msa0650990:CDS | 25.0% |
| !!! | ATTAAATTGACTAGTTTGTG+GGG | - | chr4_3:58285548-58285567 | Msa0650990:intron | 25.0% |
| ! | CATGGAAATAAAAACTTGAA+AGG | - | chr4_3:58285576-58285595 | Msa0650990:intron | 25.0% |
| ! | ATTAGTTATCGTGTAATGAT+TGG | + | chr4_3:58285919-58285938 | None:intergenic | 25.0% |
| ! | AAACTCAAATGAATCTTAAC+TGG | - | chr4_3:58286051-58286070 | Msa0650990:CDS | 25.0% |
| ! | CTCTAGTATACAAAACTTAA+GGG | + | chr4_3:58286190-58286209 | None:intergenic | 25.0% |
| ! | AATAAAAGAAAAATGCGCTA+AGG | + | chr4_3:58286332-58286351 | None:intergenic | 25.0% |
| !! | ATAAAGATCTCCTTTGAAAA+TGG | + | chr4_3:58286404-58286423 | None:intergenic | 25.0% |
| !!! | AATTTGGTTTTAGAATCTCT+GGG | + | chr4_3:58286463-58286482 | None:intergenic | 25.0% |
| !!! | AAATTTGGTTTTAGAATCTC+TGG | + | chr4_3:58286464-58286483 | None:intergenic | 25.0% |
| !!! | GAGATTCTAAAACCAAATTT+TGG | - | chr4_3:58286464-58286483 | Msa0650990:CDS | 25.0% |
| ! | AACTCATTCTAACCAAAATT+TGG | + | chr4_3:58286479-58286498 | None:intergenic | 25.0% |
| !!! | TATATTTTGTTTGCATGGAT+AGG | - | chr4_3:58286582-58286601 | Msa0650990:five_prime_UTR | 25.0% |
| ! | AGCCAAAAAATTGTTGAAAA+AGG | + | chr4_3:58286653-58286672 | None:intergenic | 25.0% |
| TAGAAATTGAACAAAAGAGG+GGG | + | chr4_3:58278406-58278425 | None:intergenic | 30.0% | |
| TGTTATAGAAATGACGATGA+CGG | - | chr4_3:58278605-58278624 | Msa0650990:three_prime_UTR | 30.0% | |
| CTGATCTTTGTTGAAATTAG+CGG | + | chr4_3:58278698-58278717 | None:intergenic | 30.0% | |
| TAAAAGAGAGAATTGAAACC+AGG | + | chr4_3:58278763-58278782 | None:intergenic | 30.0% | |
| ! | TTGGTGATTGTTTATTCATG+TGG | - | chr4_3:58278812-58278831 | Msa0650990:intron | 30.0% |
| ATTGTTTATTCATGTGGCTT+TGG | - | chr4_3:58278818-58278837 | Msa0650990:intron | 30.0% | |
| ! | AAATTTTACTGTCGTAATGC+TGG | - | chr4_3:58278872-58278891 | Msa0650990:exon | 30.0% |
| ! | AATTTTACTGTCGTAATGCT+GGG | - | chr4_3:58278873-58278892 | Msa0650990:exon | 30.0% |
| ! | AGGGTTTTACATAGCAATAA+TGG | - | chr4_3:58279002-58279021 | Msa0650990:intron | 30.0% |
| TAATGGTTATCGTGGAAAAT+TGG | - | chr4_3:58279019-58279038 | Msa0650990:intron | 30.0% | |
| AATGGTTATCGTGGAAAATT+GGG | - | chr4_3:58279020-58279039 | Msa0650990:intron | 30.0% | |
| GAAGAAGAAAAAGTCCATAT+TGG | - | chr4_3:58279189-58279208 | Msa0650990:intron | 30.0% | |
| AGAAAAAGTCCATATTGGAT+AGG | - | chr4_3:58279194-58279213 | Msa0650990:intron | 30.0% | |
| GTATCTATACCTATCCAATA+TGG | + | chr4_3:58279206-58279225 | None:intergenic | 30.0% | |
| AATCTCTATGCCATATATCT+AGG | + | chr4_3:58279461-58279480 | None:intergenic | 30.0% | |
| TCACAGCAATCTAAACATAA+CGG | + | chr4_3:58279810-58279829 | None:intergenic | 30.0% | |
| TTATGTTTAGATTGCTGTGA+TGG | - | chr4_3:58279810-58279829 | Msa0650990:CDS | 30.0% | |
| AAAAGGGCAGAACAAAAAAA+TGG | + | chr4_3:58280066-58280085 | None:intergenic | 30.0% | |
| AGTACATCATTACGAGAAAA+GGG | + | chr4_3:58280082-58280101 | None:intergenic | 30.0% | |
| AAGTACATCATTACGAGAAA+AGG | + | chr4_3:58280083-58280102 | None:intergenic | 30.0% | |
| TTCTCGTAATGATGTACTTA+AGG | - | chr4_3:58280084-58280103 | Msa0650990:intron | 30.0% | |
| GCAAGAAACCTTAAAATGTT+CGG | - | chr4_3:58280369-58280388 | Msa0650990:CDS | 30.0% | |
| TGTTTAATTACACATATGCC+CGG | - | chr4_3:58280427-58280446 | Msa0650990:CDS | 30.0% | |
| GTTCATCAATTGAGAATAGA+TGG | + | chr4_3:58280462-58280481 | None:intergenic | 30.0% | |
| TATTACCTGTCTGTTTAACA+AGG | - | chr4_3:58280505-58280524 | Msa0650990:intron | 30.0% | |
| ATTACCTGTCTGTTTAACAA+GGG | - | chr4_3:58280506-58280525 | Msa0650990:intron | 30.0% | |
| !!! | TGATCTTGCCTTTTAAAACA+AGG | + | chr4_3:58280578-58280597 | None:intergenic | 30.0% |
| ! | TCATAAAGGATGTGAACTTT+TGG | - | chr4_3:58280639-58280658 | Msa0650990:intron | 30.0% |
| ! | CAATTTTCTATGCTACCAAA+TGG | - | chr4_3:58280708-58280727 | Msa0650990:intron | 30.0% |
| TTGTTCTTTATGATCTGCAA+TGG | + | chr4_3:58280764-58280783 | None:intergenic | 30.0% | |
| AAAAGAAGAGAAACAGAAGA+AGG | - | chr4_3:58280822-58280841 | Msa0650990:CDS | 30.0% | |
| AAAACCAATGAAGAAGATAC+AGG | - | chr4_3:58280877-58280896 | Msa0650990:CDS | 30.0% | |
| AATTCCTGTATCTTCTTCAT+TGG | + | chr4_3:58280884-58280903 | None:intergenic | 30.0% | |
| TACAGGAATTGAAAATGAAG+CGG | - | chr4_3:58280894-58280913 | Msa0650990:CDS | 30.0% | |
| ! | GTCAAGTTGTGCAATTAAAA+TGG | + | chr4_3:58281018-58281037 | None:intergenic | 30.0% |
| ! | TTTTGAACGCATTAACAATC+TGG | - | chr4_3:58281080-58281099 | Msa0650990:intron | 30.0% |
| ! | CAAAATTATTGTTGTTGAGG+TGG | - | chr4_3:58281577-58281596 | Msa0650990:intron | 30.0% |
| ! | TTCTTTTGCATTCTACATTC+AGG | + | chr4_3:58281664-58281683 | None:intergenic | 30.0% |
| !! | CATAAAACTGACTTTTCTTG+GGG | + | chr4_3:58281937-58281956 | None:intergenic | 30.0% |
| !! | GTCATAAAACTGACTTTTCT+TGG | + | chr4_3:58281939-58281958 | None:intergenic | 30.0% |
| TGATTGCAGAATATTTCTTG+TGG | - | chr4_3:58282117-58282136 | Msa0650990:intron | 30.0% | |
| ATCCAAATCTGAGAAATCAA+AGG | + | chr4_3:58282158-58282177 | None:intergenic | 30.0% | |
| ATTTCTCAGATTTGGATGAA+AGG | - | chr4_3:58282161-58282180 | Msa0650990:intron | 30.0% | |
| !!! | GGCTTTAAACTCTTTTTTAC+TGG | - | chr4_3:58282376-58282395 | Msa0650990:intron | 30.0% |
| GTAGGTGTAATGTATATAAC+AGG | + | chr4_3:58282561-58282580 | None:intergenic | 30.0% | |
| ! | TTTGAGGATATCTTTGTTGT+AGG | + | chr4_3:58282579-58282598 | None:intergenic | 30.0% |
| ! | ACAATGGTAATTTTCCATGA+AGG | + | chr4_3:58282651-58282670 | None:intergenic | 30.0% |
| ATTTAGAAATATACCCTCCT+AGG | - | chr4_3:58282727-58282746 | Msa0650990:intron | 30.0% | |
| TAATGTGTCTATTGTAGAAG+GGG | + | chr4_3:58282757-58282776 | None:intergenic | 30.0% | |
| GTAATGTGTCTATTGTAGAA+GGG | + | chr4_3:58282758-58282777 | None:intergenic | 30.0% | |
| AGTAATGTGTCTATTGTAGA+AGG | + | chr4_3:58282759-58282778 | None:intergenic | 30.0% | |
| TAGTAGTTAGAGAAGTTAGT+TGG | + | chr4_3:58282881-58282900 | None:intergenic | 30.0% | |
| !! | GTTTGTTATGATATGGGATA+AGG | + | chr4_3:58282933-58282952 | None:intergenic | 30.0% |
| !! | TGAGGAGTTTGTTATGATAT+GGG | + | chr4_3:58282939-58282958 | None:intergenic | 30.0% |
| !! | ATGAGGAGTTTGTTATGATA+TGG | + | chr4_3:58282940-58282959 | None:intergenic | 30.0% |
| CAAACATTGATAGGATAATG+AGG | + | chr4_3:58282957-58282976 | None:intergenic | 30.0% | |
| ! | GTATGACCTTTATTTGTGAT+TGG | + | chr4_3:58283057-58283076 | None:intergenic | 30.0% |
| !!! | TGTTTTTGTTTTAGCTCTGT+TGG | + | chr4_3:58283102-58283121 | None:intergenic | 30.0% |
| !!! | GAGCACTACAACTTTTTTAA+TGG | + | chr4_3:58283238-58283257 | None:intergenic | 30.0% |
| ! | AGACTATTTCCCTATTTTGT+TGG | + | chr4_3:58283360-58283379 | None:intergenic | 30.0% |
| ATCCCTGAATTCAATTTGAT+AGG | + | chr4_3:58283545-58283564 | None:intergenic | 30.0% | |
| ATCAAATTGAATTCAGGGAT+AGG | - | chr4_3:58283545-58283564 | Msa0650990:intron | 30.0% | |
| ATAAGGTTTATGTACAGAAG+AGG | + | chr4_3:58283614-58283633 | None:intergenic | 30.0% | |
| AGCAATCTATCAGTTCATAT+AGG | + | chr4_3:58283765-58283784 | None:intergenic | 30.0% | |
| AAAACATCAATGAAAAGTGG+GGG | + | chr4_3:58283834-58283853 | None:intergenic | 30.0% | |
| GTGGGTATATACATATCTTT+AGG | - | chr4_3:58283867-58283886 | Msa0650990:intron | 30.0% | |
| GGGTATATACATATCTTTAG+GGG | - | chr4_3:58283869-58283888 | Msa0650990:intron | 30.0% | |
| TATATCTTCGTCATATTTGC+CGG | + | chr4_3:58284115-58284134 | None:intergenic | 30.0% | |
| AAACGATGAAGAATTTCAAG+AGG | - | chr4_3:58284134-58284153 | Msa0650990:CDS | 30.0% | |
| TTCAAATGTTTATCAAAGGG+TGG | - | chr4_3:58284237-58284256 | Msa0650990:intron | 30.0% | |
| TATCAAAGGGTGGTATATAA+TGG | - | chr4_3:58284247-58284266 | Msa0650990:intron | 30.0% | |
| ATAACTTACACCTTTCTCTT+TGG | - | chr4_3:58284453-58284472 | Msa0650990:intron | 30.0% | |
| !! | AGACTGTATTTTAGACAACT+TGG | + | chr4_3:58284527-58284546 | None:intergenic | 30.0% |
| AAGTAAAACTTCAATGCTAC+AGG | - | chr4_3:58284669-58284688 | Msa0650990:intron | 30.0% | |
| AATGAATAAAACTCCTTTGC+TGG | + | chr4_3:58284696-58284715 | None:intergenic | 30.0% | |
| !!! | ACTTTCTGGGATGAAAATTT+TGG | - | chr4_3:58284841-58284860 | Msa0650990:intron | 30.0% |
| !!! | ATGCTTGAGTTTTTTTGAAC+CGG | + | chr4_3:58284988-58285007 | None:intergenic | 30.0% |
| AAAAAAACTCAAGCATCAGT+TGG | - | chr4_3:58284992-58285011 | Msa0650990:CDS | 30.0% | |
| CCTCTCAAAACTGAAATAAA+TGG | + | chr4_3:58285201-58285220 | None:intergenic | 30.0% | |
| !!! | CCATTTATTTCAGTTTTGAG+AGG | - | chr4_3:58285198-58285217 | Msa0650990:intron | 30.0% |
| ! | TATACTCAACTGTTACTTAC+AGG | - | chr4_3:58285286-58285305 | Msa0650990:intron | 30.0% |
| ! | AGAGTTAAGAGCGTATTAAT+AGG | - | chr4_3:58285401-58285420 | Msa0650990:intron | 30.0% |
| ATAGGTATAATAGCTCATCT+TGG | - | chr4_3:58285419-58285438 | Msa0650990:intron | 30.0% | |
| TAGGTATAATAGCTCATCTT+GGG | - | chr4_3:58285420-58285439 | Msa0650990:intron | 30.0% | |
| TACTTTCAGTGAGTTATACT+TGG | - | chr4_3:58285452-58285471 | Msa0650990:intron | 30.0% | |
| GGAAATAAAAACTTGAAAGG+TGG | - | chr4_3:58285579-58285598 | Msa0650990:intron | 30.0% | |
| TAAAAACTTGAAAGGTGGTT+TGG | - | chr4_3:58285584-58285603 | Msa0650990:intron | 30.0% | |
| !!! | TTAATGGCTTGTTTTTGAAC+AGG | - | chr4_3:58285655-58285674 | Msa0650990:intron | 30.0% |
| AAATGAAGACAAGTGGTAAA+AGG | + | chr4_3:58285772-58285791 | None:intergenic | 30.0% | |
| TTTACCACTTGTCTTCATTT+AGG | - | chr4_3:58285772-58285791 | Msa0650990:intron | 30.0% | |
| ATATTGTCCTTACCTCAATA+TGG | - | chr4_3:58285937-58285956 | Msa0650990:intron | 30.0% | |
| ATAAATGCCATATTGAGGTA+AGG | + | chr4_3:58285947-58285966 | None:intergenic | 30.0% | |
| TCACTATAAATGCCATATTG+AGG | + | chr4_3:58285952-58285971 | None:intergenic | 30.0% | |
| ATCTTAACTGGTAAGTTTAC+TGG | - | chr4_3:58286063-58286082 | Msa0650990:CDS | 30.0% | |
| GCTCTAGTATACAAAACTTA+AGG | + | chr4_3:58286191-58286210 | None:intergenic | 30.0% | |
| TTAAAATCACAACGACTACT+TGG | - | chr4_3:58286350-58286369 | Msa0650990:intron | 30.0% | |
| TGACAAAACTGGTACGAATT+TGG | - | chr4_3:58278268-58278287 | Msa0650990:three_prime_UTR | 35.0% | |
| !! | TTTGGTGATGATCTTGAATG+AGG | - | chr4_3:58278286-58278305 | Msa0650990:three_prime_UTR | 35.0% |
| AGAAATTGAACAAAAGAGGG+GGG | + | chr4_3:58278405-58278424 | None:intergenic | 35.0% | |
| GTTTGGATGAAGAAGAGAAT+GGG | + | chr4_3:58278506-58278525 | None:intergenic | 35.0% | |
| AGAATTGAAACCAGGTTCAT+CGG | + | chr4_3:58278755-58278774 | None:intergenic | 35.0% | |
| ! | TAGACTTTACTGCTTTAGAC+AGG | - | chr4_3:58278982-58279001 | Msa0650990:intron | 35.0% |
| ! | AGACTTTACTGCTTTAGACA+GGG | - | chr4_3:58278983-58279002 | Msa0650990:intron | 35.0% |
| CATAGCAATAATGGTTATCG+TGG | - | chr4_3:58279011-58279030 | Msa0650990:intron | 35.0% | |
| ATGGTTATCGTGGAAAATTG+GGG | - | chr4_3:58279021-58279040 | Msa0650990:intron | 35.0% | |
| ! | TTTAGGTTCGTCACTAAAGT+CGG | + | chr4_3:58279141-58279160 | None:intergenic | 35.0% |
| TTAGTGACGAACCTAAAACT+AGG | - | chr4_3:58279144-58279163 | Msa0650990:intron | 35.0% | |
| TAGTGACGAACCTAAAACTA+GGG | - | chr4_3:58279145-58279164 | Msa0650990:intron | 35.0% | |
| ! | GTGTAGAAAGTGGACATTTT+TGG | - | chr4_3:58279316-58279335 | Msa0650990:intron | 35.0% |
| !! | AAAGTGGACATTTTTGGATC+CGG | - | chr4_3:58279322-58279341 | Msa0650990:intron | 35.0% |
| ACATGCTGCTAAAACAATCT+CGG | + | chr4_3:58279528-58279547 | None:intergenic | 35.0% | |
| CAAGCACCTTATGTTGTTAT+CGG | - | chr4_3:58279601-58279620 | Msa0650990:intron | 35.0% | |
| TAAGCAGATGAACAGTGTAA+GGG | + | chr4_3:58279628-58279647 | None:intergenic | 35.0% | |
| TTAAGCAGATGAACAGTGTA+AGG | + | chr4_3:58279629-58279648 | None:intergenic | 35.0% | |
| AGCAGTTAATTGGGTATCAA+TGG | + | chr4_3:58279716-58279735 | None:intergenic | 35.0% | |
| GATGGAAGTGATGAATATGA+TGG | - | chr4_3:58279828-58279847 | Msa0650990:CDS | 35.0% | |
| AAAGATTGCCACATATCAAG+AGG | - | chr4_3:58279914-58279933 | Msa0650990:intron | 35.0% | |
| AAGATTGCCACATATCAAGA+GGG | - | chr4_3:58279915-58279934 | Msa0650990:intron | 35.0% | |
| GAAATCTGATTAGGAAAGCA+GGG | - | chr4_3:58280289-58280308 | Msa0650990:intron | 35.0% | |
| GATACAGCAATTGTTGTGTT+TGG | - | chr4_3:58280311-58280330 | Msa0650990:intron | 35.0% | |
| ! | TTGGTTTGAAGTGCTAGATT+AGG | - | chr4_3:58280330-58280349 | Msa0650990:intron | 35.0% |
| ! | ATGCTCTTCCGAACATTTTA+AGG | + | chr4_3:58280380-58280399 | None:intergenic | 35.0% |
| AATTGAGAATAGATGGGTGT+GGG | + | chr4_3:58280455-58280474 | None:intergenic | 35.0% | |
| GTTAAACAGACAGGTAATAG+TGG | + | chr4_3:58280504-58280523 | None:intergenic | 35.0% | |
| TTACCTGTCTGTTTAACAAG+GGG | - | chr4_3:58280507-58280526 | Msa0650990:intron | 35.0% | |
| GCGTGAAATCTGTAATTTCA+CGG | + | chr4_3:58280615-58280634 | None:intergenic | 35.0% | |
| GATTTCACGCTATGTCATAA+AGG | - | chr4_3:58280625-58280644 | Msa0650990:intron | 35.0% | |
| !! | AAGGATGTGAACTTTTGGTT+TGG | - | chr4_3:58280644-58280663 | Msa0650990:intron | 35.0% |
| !!! | AGGATGTGAACTTTTGGTTT+GGG | - | chr4_3:58280645-58280664 | Msa0650990:intron | 35.0% |
| !!! | ACTTTTGGTTTGGGTGATAA+AGG | - | chr4_3:58280654-58280673 | Msa0650990:intron | 35.0% |
| TAGGAGGATGATAAAAGATC+AGG | + | chr4_3:58281154-58281173 | None:intergenic | 35.0% | |
| ! | TGATCTTTTATCATCCTCCT+AGG | - | chr4_3:58281153-58281172 | Msa0650990:intron | 35.0% |
| ACTTTCTTATAGGATGAAGC+TGG | - | chr4_3:58281432-58281451 | Msa0650990:intron | 35.0% | |
| CTTTCTTATAGGATGAAGCT+GGG | - | chr4_3:58281433-58281452 | Msa0650990:intron | 35.0% | |
| TTTCTTATAGGATGAAGCTG+GGG | - | chr4_3:58281434-58281453 | Msa0650990:intron | 35.0% | |
| ! | AGGATCCTTGTTTGATAAAG+TGG | - | chr4_3:58281512-58281531 | Msa0650990:intron | 35.0% |
| CTCTTCCACTTTATCAAACA+AGG | + | chr4_3:58281520-58281539 | None:intergenic | 35.0% | |
| CTTGTTTGATAAAGTGGAAG+AGG | - | chr4_3:58281518-58281537 | Msa0650990:intron | 35.0% | |
| ATCAGTTTCAGATTCAACAG+TGG | + | chr4_3:58281700-58281719 | None:intergenic | 35.0% | |
| !! | TCTGAAACTGATTTGACAAC+TGG | - | chr4_3:58281708-58281727 | Msa0650990:intron | 35.0% |
| !! | AACTGATTTGACAACTGGAA+AGG | - | chr4_3:58281713-58281732 | Msa0650990:intron | 35.0% |
| TTCTGATGAAGCCATCAATA+CGG | - | chr4_3:58281743-58281762 | Msa0650990:intron | 35.0% | |
| ATTAGGTCATAATGAGGTAC+CGG | - | chr4_3:58281875-58281894 | Msa0650990:intron | 35.0% | |
| ACAAAAATAGAAGAGCCTAC+CGG | + | chr4_3:58281897-58281916 | None:intergenic | 35.0% | |
| TATTCTGCAATCACTTATGG+AGG | + | chr4_3:58282110-58282129 | None:intergenic | 35.0% | |
| ! | TGCCTTTGATTTCTCAGATT+TGG | - | chr4_3:58282153-58282172 | Msa0650990:intron | 35.0% |
| ATTTGGATGAAAGGAAACAC+TGG | - | chr4_3:58282170-58282189 | Msa0650990:intron | 35.0% | |
| TTTGGATGAAAGGAAACACT+GGG | - | chr4_3:58282171-58282190 | Msa0650990:intron | 35.0% | |
| ATCTAACTTTGTCATGTCAG+AGG | + | chr4_3:58282275-58282294 | None:intergenic | 35.0% | |
| !!! | GGCTAAACTGCATTTTTTGA+AGG | - | chr4_3:58282446-58282465 | Msa0650990:intron | 35.0% |
| GAATTATCTGTCTTCCTTCA+TGG | - | chr4_3:58282634-58282653 | Msa0650990:intron | 35.0% | |
| ATTACCATTGTGAGTGTGTT+AGG | - | chr4_3:58282660-58282679 | Msa0650990:intron | 35.0% | |
| GAGAATACATGAATAGAGGA+GGG | + | chr4_3:58282815-58282834 | None:intergenic | 35.0% | |
| CTAGGAGAATACATGAATAG+AGG | + | chr4_3:58282819-58282838 | None:intergenic | 35.0% | |
| GGAGCAGTTAGTAACAATAT+AGG | + | chr4_3:58282912-58282931 | None:intergenic | 35.0% | |
| CAAAATAGGGAAATAGTCTC+AGG | - | chr4_3:58283361-58283380 | Msa0650990:intron | 35.0% | |
| GTCTATCAGGTTTCAGATTA+GGG | - | chr4_3:58283383-58283402 | Msa0650990:intron | 35.0% | |
| GAGATACTCCAACATTTGTT+TGG | + | chr4_3:58283480-58283499 | None:intergenic | 35.0% | |
| ! | AACAAATGTTGGAGTATCTC+TGG | - | chr4_3:58283480-58283499 | Msa0650990:intron | 35.0% |
| TCAATTTGATAGGATTGGGT+GGG | + | chr4_3:58283535-58283554 | None:intergenic | 35.0% | |
| TTCAATTTGATAGGATTGGG+TGG | + | chr4_3:58283536-58283555 | None:intergenic | 35.0% | |
| TACTTATATTCGAGACTGCA+AGG | + | chr4_3:58283640-58283659 | None:intergenic | 35.0% | |
| AAATCAAACTTTGTGCCTTG+TGG | - | chr4_3:58283689-58283708 | Msa0650990:intron | 35.0% | |
| AAGTGAATATGAGTTCCACA+AGG | + | chr4_3:58283707-58283726 | None:intergenic | 35.0% | |
| !! | GAATACTGATGGATTGTCAA+AGG | - | chr4_3:58283906-58283925 | Msa0650990:intron | 35.0% |
| GGATTGTCAAAGGAAGAATT+AGG | - | chr4_3:58283916-58283935 | Msa0650990:intron | 35.0% | |
| TTCATTGTCTAATGCAGTGT+TGG | + | chr4_3:58283998-58284017 | None:intergenic | 35.0% | |
| TGCATTAGACAATGAAGATC+AGG | - | chr4_3:58284002-58284021 | Msa0650990:CDS | 35.0% | |
| GATCAGGAAGATATTCTACA+CGG | - | chr4_3:58284018-58284037 | Msa0650990:CDS | 35.0% | |
| ATCAGGAAGATATTCTACAC+GGG | - | chr4_3:58284019-58284038 | Msa0650990:CDS | 35.0% | |
| CAGATTTGTATGAGGAACTA+AGG | + | chr4_3:58284173-58284192 | None:intergenic | 35.0% | |
| TATAACAAACCTGACAAGTC+TGG | + | chr4_3:58284210-58284229 | None:intergenic | 35.0% | |
| ! | GTATTTTCTCTAACCACGAA+GGG | + | chr4_3:58284324-58284343 | None:intergenic | 35.0% |
| ! | TGTATTTTCTCTAACCACGA+AGG | + | chr4_3:58284325-58284344 | None:intergenic | 35.0% |
| AGGTGTAAGTTATATCCATC+TGG | + | chr4_3:58284446-58284465 | None:intergenic | 35.0% | |
| TCTAAAGAAGCCAAAGAGAA+AGG | + | chr4_3:58284466-58284485 | None:intergenic | 35.0% | |
| !! | CAAGTTTTTGCTTTTGTGTC+AGG | + | chr4_3:58284561-58284580 | None:intergenic | 35.0% |
| !!! | GATTTTGGTTAGTATCATGC+TGG | - | chr4_3:58284580-58284599 | Msa0650990:intron | 35.0% |
| ! | CACAATACAAATGCTTTGAG+TGG | + | chr4_3:58284615-58284634 | None:intergenic | 35.0% |
| ! | CACTCAAAGCATTTGTATTG+TGG | - | chr4_3:58284613-58284632 | Msa0650990:intron | 35.0% |
| ! | TCAAAGCATTTGTATTGTGG+AGG | - | chr4_3:58284616-58284635 | Msa0650990:intron | 35.0% |
| !!! | TGGGATGAAAATTTTGGTTC+AGG | - | chr4_3:58284847-58284866 | Msa0650990:intron | 35.0% |
| TTAATCAGACTGTGTTTCTC+CGG | - | chr4_3:58284966-58284985 | Msa0650990:CDS | 35.0% | |
| TTTCTAATGGTGATCATTGC+TGG | - | chr4_3:58285119-58285138 | Msa0650990:intron | 35.0% | |
| TTCATTTGGATCACAAGTGT+TGG | - | chr4_3:58285344-58285363 | Msa0650990:intron | 35.0% | |
| !! | TTGGTGACTTTTGCAACATT+GGG | - | chr4_3:58285471-58285490 | Msa0650990:intron | 35.0% |
| !! | AGTGGACTGTCTGTAATTAA+TGG | - | chr4_3:58285639-58285658 | Msa0650990:intron | 35.0% |
| TTGACCTAAATGAAGACAAG+TGG | + | chr4_3:58285779-58285798 | None:intergenic | 35.0% | |
| TATGGCATTTATAGTGACTG+TGG | - | chr4_3:58285955-58285974 | Msa0650990:intron | 35.0% | |
| ! | TGAGTTTTCACAACTCATCA+CGG | + | chr4_3:58286038-58286057 | None:intergenic | 35.0% |
| ! | GCATTGTGATTCCTTTTCTT+TGG | - | chr4_3:58286085-58286104 | Msa0650990:intron | 35.0% |
| GACTCAAATCTCCAAAGAAA+AGG | + | chr4_3:58286099-58286118 | None:intergenic | 35.0% | |
| ! | TTTCTTTGGAGATTTGAGTC+CGG | - | chr4_3:58286099-58286118 | Msa0650990:intron | 35.0% |
| ! | GCAAAAAAGTTGATCATCTC+CGG | + | chr4_3:58286121-58286140 | None:intergenic | 35.0% |
| AACAGCTAGTATGAAGATCA+TGG | - | chr4_3:58286145-58286164 | Msa0650990:intron | 35.0% | |
| TACTAGAGCTTACCCAAATT+TGG | - | chr4_3:58286202-58286221 | Msa0650990:CDS | 35.0% | |
| AGCTTACCCAAATTTGGTAT+TGG | - | chr4_3:58286208-58286227 | Msa0650990:CDS | 35.0% | |
| !! | TACCCAAATTTGGTATTGGT+TGG | - | chr4_3:58286212-58286231 | Msa0650990:CDS | 35.0% |
| !! | ACCCAAATTTGGTATTGGTT+GGG | - | chr4_3:58286213-58286232 | Msa0650990:CDS | 35.0% |
| ! | ATCTCCTTTGAAAATGGAAC+GGG | + | chr4_3:58286398-58286417 | None:intergenic | 35.0% |
| ! | GATCTCCTTTGAAAATGGAA+CGG | + | chr4_3:58286399-58286418 | None:intergenic | 35.0% |
| CTAGACTGCAAAATACTAGA+CGG | - | chr4_3:58286437-58286456 | Msa0650990:CDS | 35.0% | |
| !! | TTTTGTTTGCATGGATAGGA+AGG | - | chr4_3:58286586-58286605 | Msa0650990:five_prime_UTR | 35.0% |
| GGTTTGGATGAAGAAGAGAA+TGG | + | chr4_3:58278507-58278526 | None:intergenic | 40.0% | |
| TAACAGTGAGATGAACCTTG+GGG | + | chr4_3:58278555-58278574 | None:intergenic | 40.0% | |
| GTAACAGTGAGATGAACCTT+GGG | + | chr4_3:58278556-58278575 | None:intergenic | 40.0% | |
| CTTTGGTATTGCAGGTACAT+CGG | - | chr4_3:58278835-58278854 | Msa0650990:intron | 40.0% | |
| ! | CGACAGTAAAATTTTCCACG+CGG | + | chr4_3:58278866-58278885 | None:intergenic | 40.0% |
| ! | TTTTCGTCTCGAGTCAATGA+TGG | - | chr4_3:58278914-58278933 | Msa0650990:CDS | 40.0% |
| ! | CGAGTCAATGATGGAATTTG+CGG | - | chr4_3:58278923-58278942 | Msa0650990:CDS | 40.0% |
| AATGTGTGTGACCTCAATTG+CGG | - | chr4_3:58279047-58279066 | Msa0650990:CDS | 40.0% | |
| AGTTGTCAAAACCGCAATTG+AGG | + | chr4_3:58279061-58279080 | None:intergenic | 40.0% | |
| ATATCACACTGCACAGATTG+TGG | - | chr4_3:58279093-58279112 | Msa0650990:intron | 40.0% | |
| TTAGGTTCGTCACTAAAGTC+GGG | + | chr4_3:58279140-58279159 | None:intergenic | 40.0% | |
| GAACCTAAAACTAGGGACAA+GGG | - | chr4_3:58279152-58279171 | Msa0650990:intron | 40.0% | |
| !! | TTTCCCTTGTCCCTAGTTTT+AGG | + | chr4_3:58279158-58279177 | None:intergenic | 40.0% |
| GGATAGGTATAGATACGCAT+AGG | - | chr4_3:58279210-58279229 | Msa0650990:CDS | 40.0% | |
| AAGGGACCGATAACAACATA+AGG | + | chr4_3:58279610-58279629 | None:intergenic | 40.0% | |
| CTACAGGCTAGCAGTTAATT+GGG | + | chr4_3:58279725-58279744 | None:intergenic | 40.0% | |
| ACTACAGGCTAGCAGTTAAT+TGG | + | chr4_3:58279726-58279745 | None:intergenic | 40.0% | |
| CTAGAAACTGCACAAACTAC+AGG | + | chr4_3:58279741-58279760 | None:intergenic | 40.0% | |
| AGCAATCTAAACATAACGGC+AGG | + | chr4_3:58279806-58279825 | None:intergenic | 40.0% | |
| ! | AAAGTGCCCAAATACATGCT+GGG | - | chr4_3:58279857-58279876 | Msa0650990:intron | 40.0% |
| AGCAATTGAACACGCACATT+TGG | - | chr4_3:58279956-58279975 | Msa0650990:intron | 40.0% | |
| GGGGTTGTGAAACAGTTAAA+AGG | - | chr4_3:58280038-58280057 | Msa0650990:CDS | 40.0% | |
| GGAAATCTGATTAGGAAAGC+AGG | - | chr4_3:58280288-58280307 | Msa0650990:intron | 40.0% | |
| CAATTGAGAATAGATGGGTG+TGG | + | chr4_3:58280456-58280475 | None:intergenic | 40.0% | |
| AGAACAAATAGACAAGGCTG+AGG | - | chr4_3:58280777-58280796 | Msa0650990:CDS | 40.0% | |
| AATAGACAAGGCTGAGGAAA+AGG | - | chr4_3:58280783-58280802 | Msa0650990:CDS | 40.0% | |
| AGAAGAGAAACAGAAGAAGG+AGG | - | chr4_3:58280825-58280844 | Msa0650990:CDS | 40.0% | |
| AGACATCAAAGACAATTCCG+CGG | - | chr4_3:58280927-58280946 | Msa0650990:CDS | 40.0% | |
| TTTCTCATGAATACTTGCCG+CGG | + | chr4_3:58280947-58280966 | None:intergenic | 40.0% | |
| TACAATCGAACCTGATCAAC+CGG | + | chr4_3:58280991-58281010 | None:intergenic | 40.0% | |
| ! | CGCATTAACAATCTGGAATC+TGG | - | chr4_3:58281087-58281106 | Msa0650990:intron | 40.0% |
| GGCATTCAGCTAATATGAAG+TGG | - | chr4_3:58281108-58281127 | Msa0650990:intron | 40.0% | |
| TTATCATCCTCCTAGGAGTT+AGG | - | chr4_3:58281160-58281179 | Msa0650990:intron | 40.0% | |
| TAGTAAACCTCCTAACTCCT+AGG | + | chr4_3:58281173-58281192 | None:intergenic | 40.0% | |
| AGAGAAATAATATGCCCCAG+TGG | + | chr4_3:58281317-58281336 | None:intergenic | 40.0% | |
| TGTTTCACTACTCCATCATG+TGG | - | chr4_3:58281376-58281395 | Msa0650990:intron | 40.0% | |
| TTAAACCACTGACCACATGA+TGG | + | chr4_3:58281391-58281410 | None:intergenic | 40.0% | |
| TCCTTCACTTTCAGAATCAG+TGG | + | chr4_3:58281496-58281515 | None:intergenic | 40.0% | |
| ATCTAATGAACACACATGGC+AGG | + | chr4_3:58281608-58281627 | None:intergenic | 40.0% | |
| AGAATGCAAAAGAAGCTGAG+AGG | - | chr4_3:58281670-58281689 | Msa0650990:intron | 40.0% | |
| GAATGCAAAAGAAGCTGAGA+GGG | - | chr4_3:58281671-58281690 | Msa0650990:intron | 40.0% | |
| TTCGTTATGAGACCATTCAC+TGG | + | chr4_3:58282009-58282028 | None:intergenic | 40.0% | |
| TTGGATGAAAGGAAACACTG+GGG | - | chr4_3:58282172-58282191 | Msa0650990:intron | 40.0% | |
| TTGAAACAATACCTCCCTTG+TGG | - | chr4_3:58282239-58282258 | Msa0650990:intron | 40.0% | |
| ! | TTTTGTCGTCGTACAAAGTC+AGG | + | chr4_3:58282526-58282545 | None:intergenic | 40.0% |
| ATTGTAGAAGGGGAAATCCT+AGG | + | chr4_3:58282747-58282766 | None:intergenic | 40.0% | |
| GGAGAATACATGAATAGAGG+AGG | + | chr4_3:58282816-58282835 | None:intergenic | 40.0% | |
| TGGCTGGGAGCAAATTAATA+GGG | + | chr4_3:58283082-58283101 | None:intergenic | 40.0% | |
| TTGGCTGGGAGCAAATTAAT+AGG | + | chr4_3:58283083-58283102 | None:intergenic | 40.0% | |
| !!! | TTGTTTTAGCTCTGTTGGCT+GGG | + | chr4_3:58283097-58283116 | None:intergenic | 40.0% |
| !!! | TTTGTTTTAGCTCTGTTGGC+TGG | + | chr4_3:58283098-58283117 | None:intergenic | 40.0% |
| AACACAACAAGAGAGTCAGT+CGG | - | chr4_3:58283139-58283158 | Msa0650990:intron | 40.0% | |
| GTGGTGCAAGTAAAAAAGCT+CGG | + | chr4_3:58283290-58283309 | None:intergenic | 40.0% | |
| AGGTCTCACACCAACAAAAT+AGG | - | chr4_3:58283347-58283366 | Msa0650990:intron | 40.0% | |
| GGTCTCACACCAACAAAATA+GGG | - | chr4_3:58283348-58283367 | Msa0650990:intron | 40.0% | |
| GAAATAGTCTCAGGTCTATC+AGG | - | chr4_3:58283370-58283389 | Msa0650990:intron | 40.0% | |
| GGTCTATCAGGTTTCAGATT+AGG | - | chr4_3:58283382-58283401 | Msa0650990:intron | 40.0% | |
| !! | ATTGATAATGTGCTAGGGCT+AGG | - | chr4_3:58283412-58283431 | Msa0650990:CDS | 40.0% |
| AATGGGGACCAAACAAATGT+TGG | - | chr4_3:58283469-58283488 | Msa0650990:CDS | 40.0% | |
| TTCAGGGATAGGAACAATCA+TGG | - | chr4_3:58283556-58283575 | Msa0650990:intron | 40.0% | |
| GAAATATTTCCCTTGTGAGC+AGG | + | chr4_3:58283739-58283758 | None:intergenic | 40.0% | |
| ! | GAAGCATCTGAGAATACTGA+TGG | - | chr4_3:58283895-58283914 | Msa0650990:intron | 40.0% |
| TGTCAAAGGAAGAATTAGGC+AGG | - | chr4_3:58283920-58283939 | Msa0650990:intron | 40.0% | |
| CTCAACGTCAGATTTGTATG+AGG | + | chr4_3:58284181-58284200 | None:intergenic | 40.0% | |
| ! | GGGTGTCTGGAATATATTGA+CGG | + | chr4_3:58284374-58284393 | None:intergenic | 40.0% |
| ! | ATGTCTACCTGACTGATTCA+CGG | + | chr4_3:58284395-58284414 | None:intergenic | 40.0% |
| GTATTGTGGAGGTTTAGTTG+TGG | - | chr4_3:58284627-58284646 | Msa0650990:intron | 40.0% | |
| TGGAGGTTTAGTTGTGGAAT+TGG | - | chr4_3:58284633-58284652 | Msa0650990:intron | 40.0% | |
| AGAAAGTGAGATGACGAGAT+AGG | + | chr4_3:58284828-58284847 | None:intergenic | 40.0% | |
| TATCTCGTCATCTCACTTTC+TGG | - | chr4_3:58284827-58284846 | Msa0650990:intron | 40.0% | |
| ATCTCGTCATCTCACTTTCT+GGG | - | chr4_3:58284828-58284847 | Msa0650990:intron | 40.0% | |
| TACCAAAACCTTACCCCAAA+CGG | + | chr4_3:58284932-58284951 | None:intergenic | 40.0% | |
| AATGGTGATCATTGCTGGAA+CGG | - | chr4_3:58285124-58285143 | Msa0650990:intron | 40.0% | |
| CATACCTTCAAACTCCTATC+AGG | + | chr4_3:58285151-58285170 | None:intergenic | 40.0% | |
| !! | CTTGGTGACTTTTGCAACAT+TGG | - | chr4_3:58285470-58285489 | Msa0650990:intron | 40.0% |
| ! | TGAAAGGTGGTTTGGATTTG+TGG | - | chr4_3:58285592-58285611 | Msa0650990:intron | 40.0% |
| GAACAGGTCAAGCTAAAATG+CGG | - | chr4_3:58285671-58285690 | Msa0650990:intron | 40.0% | |
| AACAGGTCAAGCTAAAATGC+GGG | - | chr4_3:58285672-58285691 | Msa0650990:intron | 40.0% | |
| ATAACAATCCCTACTCGCAA+CGG | + | chr4_3:58285733-58285752 | None:intergenic | 40.0% | |
| ! | TTTTCCTGATTGCTGTCTCA+TGG | - | chr4_3:58285820-58285839 | Msa0650990:intron | 40.0% |
| TTTCCTGATTGCTGTCTCAT+GGG | - | chr4_3:58285821-58285840 | Msa0650990:intron | 40.0% | |
| ! | CAGCTTTTCTTCCTGACAAA+GGG | + | chr4_3:58285884-58285903 | None:intergenic | 40.0% |
| ! | TCAGCTTTTCTTCCTGACAA+AGG | + | chr4_3:58285885-58285904 | None:intergenic | 40.0% |
| TTGTCAGGAAGAAAAGCTGA+AGG | - | chr4_3:58285885-58285904 | Msa0650990:intron | 40.0% | |
| TAGTGACTGTGGAATGTAAC+AGG | - | chr4_3:58285966-58285985 | Msa0650990:intron | 40.0% | |
| CAAGCTAGACCTACTGAATT+CGG | - | chr4_3:58285999-58286018 | Msa0650990:CDS | 40.0% | |
| CCCCAACCAATACCAAATTT+GGG | + | chr4_3:58286217-58286236 | None:intergenic | 40.0% | |
| !! | CCCAAATTTGGTATTGGTTG+GGG | - | chr4_3:58286214-58286233 | Msa0650990:CDS | 40.0% |
| ACCCCAACCAATACCAAATT+TGG | + | chr4_3:58286218-58286237 | None:intergenic | 40.0% | |
| !! | ATTTGGTATTGGTTGGGGTT+AGG | - | chr4_3:58286219-58286238 | Msa0650990:CDS | 40.0% |
| !! | TTTGGTATTGGTTGGGGTTA+GGG | - | chr4_3:58286220-58286239 | Msa0650990:CDS | 40.0% |
| TCCTTATGTCTCATCTGGTT+TGG | - | chr4_3:58286284-58286303 | Msa0650990:intron | 40.0% | |
| ! | ATTGCCCGTTCCATTTTCAA+AGG | - | chr4_3:58286391-58286410 | Msa0650990:CDS | 40.0% |
| CACACTAGAACGGTATAAGA+TGG | + | chr4_3:58286547-58286566 | None:intergenic | 40.0% | |
| GTCTAGGAATCACACTAGAA+CGG | + | chr4_3:58286557-58286576 | None:intergenic | 40.0% | |
| CGATACGCTAGTGTCCATAA+CGG | - | chr4_3:58278357-58278376 | Msa0650990:three_prime_UTR | 45.0% | |
| GATACGCTAGTGTCCATAAC+GGG | - | chr4_3:58278358-58278377 | Msa0650990:three_prime_UTR | 45.0% | |
| AAACCCAAAGACCCATTCCT+CGG | - | chr4_3:58278522-58278541 | Msa0650990:three_prime_UTR | 45.0% | |
| ATTCCGAGGAATGGGTCTTT+GGG | + | chr4_3:58278528-58278547 | None:intergenic | 45.0% | |
| GGTAACAGTGAGATGAACCT+TGG | + | chr4_3:58278557-58278576 | None:intergenic | 45.0% | |
| ! | GAAATGACGATGACGGTTAC+TGG | - | chr4_3:58278612-58278631 | Msa0650990:three_prime_UTR | 45.0% |
| !! | TCATGTGGCTTTGGTATTGC+AGG | - | chr4_3:58278827-58278846 | Msa0650990:intron | 45.0% |
| AGACGAAAACAGAGACACAG+GGG | + | chr4_3:58278903-58278922 | None:intergenic | 45.0% | |
| GAGACGAAAACAGAGACACA+GGG | + | chr4_3:58278904-58278923 | None:intergenic | 45.0% | |
| CACTGCACAGATTGTGGTTA+TGG | - | chr4_3:58279099-58279118 | Msa0650990:intron | 45.0% | |
| CGAACCTAAAACTAGGGACA+AGG | - | chr4_3:58279151-58279170 | Msa0650990:intron | 45.0% | |
| ! | CAAAGTGCCCAAATACATGC+TGG | - | chr4_3:58279856-58279875 | Msa0650990:intron | 45.0% |
| TTTGACGCCCTCTTGATATG+TGG | + | chr4_3:58279925-58279944 | None:intergenic | 45.0% | |
| GCTAGATTAGGCGTCTTCTT+TGG | - | chr4_3:58280342-58280361 | Msa0650990:intron | 45.0% | |
| TCTCCCCTTGTTAAACAGAC+AGG | + | chr4_3:58280513-58280532 | None:intergenic | 45.0% | |
| TGTCTGTTTAACAAGGGGAG+AGG | - | chr4_3:58280512-58280531 | Msa0650990:intron | 45.0% | |
| !! | GGAAAAGGAGCGTTTACAGA+AGG | - | chr4_3:58280798-58280817 | Msa0650990:CDS | 45.0% |
| TGAAGTTAAAGAGGGCTCTC+CGG | - | chr4_3:58280969-58280988 | Msa0650990:CDS | 45.0% | |
| TAAACCTCCTAACTCCTAGG+AGG | + | chr4_3:58281170-58281189 | None:intergenic | 45.0% | |
| !! | GCCACTGATTCTGAAAGTGA+AGG | - | chr4_3:58281492-58281511 | Msa0650990:intron | 45.0% |
| CTACGCAGATACCGTATTGA+TGG | + | chr4_3:58281757-58281776 | None:intergenic | 45.0% | |
| TGAAGTCAGACACCAGTGAA+TGG | - | chr4_3:58281994-58282013 | Msa0650990:intron | 45.0% | |
| !! | GAGGATTAGAAGCACCACAA+GGG | + | chr4_3:58282256-58282275 | None:intergenic | 45.0% |
| !! | AGAGGATTAGAAGCACCACA+AGG | + | chr4_3:58282257-58282276 | None:intergenic | 45.0% |
| GGTTCCTAACACACTCACAA+TGG | + | chr4_3:58282667-58282686 | None:intergenic | 45.0% | |
| TAGAAGGGGAAATCCTAGGA+GGG | + | chr4_3:58282743-58282762 | None:intergenic | 45.0% | |
| TGCTCAAAGATGCAGAGTCA+AGG | - | chr4_3:58283253-58283272 | Msa0650990:intron | 45.0% | |
| TGCTCCACCAACTGGAAAAT+GGG | - | chr4_3:58283452-58283471 | Msa0650990:CDS | 45.0% | |
| ! | TTTGGTCCCCATTTTCCAGT+TGG | + | chr4_3:58283462-58283481 | None:intergenic | 45.0% |
| ! | TCGAGACTGCAAGGAGTATA+AGG | + | chr4_3:58283631-58283650 | None:intergenic | 45.0% |
| TCTGATATCTCCTGCTCACA+AGG | - | chr4_3:58283726-58283745 | Msa0650990:intron | 45.0% | |
| CTGATATCTCCTGCTCACAA+GGG | - | chr4_3:58283727-58283746 | Msa0650990:intron | 45.0% | |
| ! | GGTGTCATCGTCATATTTGC+CGG | + | chr4_3:58284094-58284113 | None:intergenic | 45.0% |
| GGCAAATATGACGATGACAC+CGG | - | chr4_3:58284093-58284112 | Msa0650990:CDS | 45.0% | |
| ! | TGTCTACCTGACTGATTCAC+GGG | + | chr4_3:58284394-58284413 | None:intergenic | 45.0% |
| CAAAGTCTGCCCCTATAAAC+AGG | - | chr4_3:58284878-58284897 | Msa0650990:CDS | 45.0% | |
| !! | TCCTGGCTAGCCTGTTTATA+GGG | + | chr4_3:58284891-58284910 | None:intergenic | 45.0% |
| ACCAAAACCTTACCCCAAAC+GGG | + | chr4_3:58284931-58284950 | None:intergenic | 45.0% | |
| ! | AGTTTTCTTTTCACAGGCGC+TGG | - | chr4_3:58285062-58285081 | Msa0650990:CDS | 45.0% |
| ! | GTTTTCTTTTCACAGGCGCT+GGG | - | chr4_3:58285063-58285082 | Msa0650990:CDS | 45.0% |
| ! | CTAGTTTGTGGGGTTTCTCA+TGG | - | chr4_3:58285558-58285577 | Msa0650990:intron | 45.0% |
| AAAGCTACATACCTGCCATG+AGG | + | chr4_3:58285847-58285866 | None:intergenic | 45.0% | |
| TTTCTTCCTGACAAAGGGCT+GGG | + | chr4_3:58285879-58285898 | None:intergenic | 45.0% | |
| ! | TTTTCTTCCTGACAAAGGGC+TGG | + | chr4_3:58285880-58285899 | None:intergenic | 45.0% |
| CTGGTTGTTCCGAATTCAGT+AGG | + | chr4_3:58286011-58286030 | None:intergenic | 45.0% | |
| GCCAAACCAGATGAGACATA+AGG | + | chr4_3:58286288-58286307 | None:intergenic | 45.0% | |
| AAATGGAACGGGCAATCTGA+AGG | + | chr4_3:58286387-58286406 | None:intergenic | 45.0% | |
| ACGCGAGGAGAAGAGAAATG+AGG | + | chr4_3:58278476-58278495 | None:intergenic | 50.0% | |
| ! | GAGGAATGGGTCTTTGGGTT+TGG | + | chr4_3:58278523-58278542 | None:intergenic | 50.0% |
| GATTCCGAGGAATGGGTCTT+TGG | + | chr4_3:58278529-58278548 | None:intergenic | 50.0% | |
| CGAGACGAAAACAGAGACAC+AGG | + | chr4_3:58278905-58278924 | None:intergenic | 50.0% | |
| GCAGTGCAACAAGACGAGTA+TGG | - | chr4_3:58279578-58279597 | Msa0650990:intron | 50.0% | |
| CAGCCTCCCAGCATGTATTT+GGG | + | chr4_3:58279866-58279885 | None:intergenic | 50.0% | |
| CAAATACATGCTGGGAGGCT+GGG | - | chr4_3:58279865-58279884 | Msa0650990:intron | 50.0% | |
| ! | TGAACACGCACATTTGGCTC+TGG | - | chr4_3:58279962-58279981 | Msa0650990:intron | 50.0% |
| !! | TTTGGCTCTGGAGAAGGATG+AGG | - | chr4_3:58279974-58279993 | Msa0650990:intron | 50.0% |
| TGGCACTACTTTGTCACGTC+TGG | + | chr4_3:58280484-58280503 | None:intergenic | 50.0% | |
| GAAACAGAAGAAGGAGGCTG+AGG | - | chr4_3:58280831-58280850 | Msa0650990:CDS | 50.0% | |
| GAAGAAGGAGGCTGAGGAAA+AGG | - | chr4_3:58280837-58280856 | Msa0650990:CDS | 50.0% | |
| TCATCCTCCTAGGAGTTAGG+AGG | - | chr4_3:58281163-58281182 | Msa0650990:intron | 50.0% | |
| CTACTCCATCATGTGGTCAG+TGG | - | chr4_3:58281383-58281402 | Msa0650990:intron | 50.0% | |
| !! | GGTCATAATGAGGTACCGGT+AGG | - | chr4_3:58281879-58281898 | Msa0650990:intron | 50.0% |
| !! | GATTAGAAGCACCACAAGGG+AGG | + | chr4_3:58282253-58282272 | None:intergenic | 50.0% |
| GTAGAAGGGGAAATCCTAGG+AGG | + | chr4_3:58282744-58282763 | None:intergenic | 50.0% | |
| CTTAAATACGAGCCACTCGC+AGG | - | chr4_3:58283193-58283212 | Msa0650990:CDS | 50.0% | |
| ! | TACCTGAAACCTTGGTGCAG+TGG | + | chr4_3:58283320-58283339 | None:intergenic | 50.0% |
| TGCGATGCTACCTGAAACCT+TGG | + | chr4_3:58283328-58283347 | None:intergenic | 50.0% | |
| ! | AAGGTTTCAGGTAGCATCGC+AGG | - | chr4_3:58283327-58283346 | Msa0650990:intron | 50.0% |
| TGATTACCTGCTCCACCAAC+TGG | - | chr4_3:58283444-58283463 | Msa0650990:CDS | 50.0% | |
| !!! | CATTTTCCAGTTGGTGGAGC+AGG | + | chr4_3:58283453-58283472 | None:intergenic | 50.0% |
| CTGCTCCACCAACTGGAAAA+TGG | - | chr4_3:58283451-58283470 | Msa0650990:CDS | 50.0% | |
| GCTCCACCAACTGGAAAATG+GGG | - | chr4_3:58283453-58283472 | Msa0650990:CDS | 50.0% | |
| ! | TGGAGTATCTCTGGTTCCCA+CGG | - | chr4_3:58283489-58283508 | Msa0650990:intron | 50.0% |
| ! | CTTGTTGCTTCACGTTGGAC+AGG | - | chr4_3:58283943-58283962 | Msa0650990:CDS | 50.0% |
| CGTTGGACAGGAGAAGATGT+TGG | - | chr4_3:58283955-58283974 | Msa0650990:CDS | 50.0% | |
| ! | TCTGAAACTGACGACGACAC+CGG | - | chr4_3:58284072-58284091 | Msa0650990:CDS | 50.0% |
| GAGAGTGAACCAGACTTGTC+AGG | - | chr4_3:58284198-58284217 | Msa0650990:intron | 50.0% | |
| AGATGCTGCTCGTATACGCA+AGG | - | chr4_3:58284483-58284502 | Msa0650990:intron | 50.0% | |
| CAATGCTACAGGTCCAGCAA+AGG | - | chr4_3:58284680-58284699 | Msa0650990:intron | 50.0% | |
| !! | CCTGGCTAGCCTGTTTATAG+GGG | + | chr4_3:58284890-58284909 | None:intergenic | 50.0% |
| !! | CTCCTGGCTAGCCTGTTTAT+AGG | + | chr4_3:58284892-58284911 | None:intergenic | 50.0% |
| ! | CTATAAACAGGCTAGCCAGG+AGG | - | chr4_3:58284890-58284909 | Msa0650990:CDS | 50.0% |
| AAAACCTTACCCCAAACGGG+TGG | + | chr4_3:58284928-58284947 | None:intergenic | 50.0% | |
| !! | ACCCGTTTGGGGTAAGGTTT+TGG | - | chr4_3:58284927-58284946 | Msa0650990:CDS | 50.0% |
| ATTGCTGGAACGGTCCTGAT+AGG | - | chr4_3:58285134-58285153 | Msa0650990:intron | 50.0% | |
| CGGTCCTGATAGGAGTTTGA+AGG | - | chr4_3:58285144-58285163 | Msa0650990:intron | 50.0% | |
| TTCTTCCTGACAAAGGGCTG+GGG | + | chr4_3:58285878-58285897 | None:intergenic | 50.0% | |
| CACAACTCATCACGGCTTTC+TGG | + | chr4_3:58286030-58286049 | None:intergenic | 50.0% | |
| ! | ACTAGGAGCGTGTTTGGCTT+TGG | - | chr4_3:58286253-58286272 | Msa0650990:CDS | 50.0% |
| !! | CTAGGAGCGTGTTTGGCTTT+GGG | - | chr4_3:58286254-58286273 | Msa0650990:CDS | 50.0% |
| !! | AGCGTGTTTGGCTTTGGGTT+GGG | - | chr4_3:58286259-58286278 | Msa0650990:CDS | 50.0% |
| GGGAGTCCTTATGTCTCATC+TGG | - | chr4_3:58286279-58286298 | Msa0650990:intron | 50.0% | |
| CACAACGACTACTTGGTCTG+TGG | - | chr4_3:58286357-58286376 | Msa0650990:intron | 50.0% | |
| GCGACAGAAACGTCCCGTTA+TGG | + | chr4_3:58278374-58278393 | None:intergenic | 55.0% | |
| AGAATGGGACGAGAAACGCG+AGG | + | chr4_3:58278491-58278510 | None:intergenic | 55.0% | |
| GATTTCTGCGATTGCCCCGA+TGG | - | chr4_3:58278727-58278746 | Msa0650990:three_prime_UTR | 55.0% | |
| !! | ACCAGGTTCATCGGTGCCAT+CGG | + | chr4_3:58278746-58278765 | None:intergenic | 55.0% |
| GTGCCCAAATACATGCTGGG+AGG | - | chr4_3:58279860-58279879 | Msa0650990:intron | 55.0% | |
| CCAGCCTCCCAGCATGTATT+TGG | + | chr4_3:58279867-58279886 | None:intergenic | 55.0% | |
| CCAAATACATGCTGGGAGGC+TGG | - | chr4_3:58279864-58279883 | Msa0650990:intron | 55.0% | |
| !! | CGCACATTTGGCTCTGGAGA+AGG | - | chr4_3:58279968-58279987 | Msa0650990:intron | 55.0% |
| AATAGATGGGTGTGGGCACC+GGG | + | chr4_3:58280448-58280467 | None:intergenic | 55.0% | |
| GAATAGATGGGTGTGGGCAC+CGG | + | chr4_3:58280449-58280468 | None:intergenic | 55.0% | |
| ! | ACCCATCCATCTGTGCCACT+GGG | - | chr4_3:58281299-58281318 | Msa0650990:intron | 55.0% |
| ATATGCCCCAGTGGCACAGA+TGG | + | chr4_3:58281308-58281327 | None:intergenic | 55.0% | |
| ! | TTGGTGCAGTGGACTTGTGG+TGG | + | chr4_3:58283309-58283328 | None:intergenic | 55.0% |
| ACCACAAGTCCACTGCACCA+AGG | - | chr4_3:58283308-58283327 | Msa0650990:intron | 55.0% | |
| ! | ACCTTGGTGCAGTGGACTTG+TGG | + | chr4_3:58283312-58283331 | None:intergenic | 55.0% |
| GTCCACTGCACCAAGGTTTC+AGG | - | chr4_3:58283315-58283334 | Msa0650990:intron | 55.0% | |
| ! | GGTCCCCATTTTCCAGTTGG+TGG | + | chr4_3:58283459-58283478 | None:intergenic | 55.0% |
| TTCCCACGGATTCCATGAGC+TGG | - | chr4_3:58283503-58283522 | Msa0650990:intron | 55.0% | |
| TGCCAGCTCATGGAATCCGT+GGG | + | chr4_3:58283508-58283527 | None:intergenic | 55.0% | |
| !! | GCAGGCTTGTTGCTTCACGT+TGG | - | chr4_3:58283938-58283957 | Msa0650990:CDS | 55.0% |
| GCACAACAGATGACCCTTCG+TGG | - | chr4_3:58284308-58284327 | Msa0650990:intron | 55.0% | |
| ! | CTGACTGATTCACGGGTGTC+TGG | + | chr4_3:58284387-58284406 | None:intergenic | 55.0% |
| CAGACACCCGTGAATCAGTC+AGG | - | chr4_3:58284385-58284404 | Msa0650990:intron | 55.0% | |
| ! | CCCCTATAAACAGGCTAGCC+AGG | - | chr4_3:58284887-58284906 | Msa0650990:CDS | 55.0% |
| ! | TAAACAGGCTAGCCAGGAGG+AGG | - | chr4_3:58284893-58284912 | Msa0650990:CDS | 55.0% |
| ! | AAACAGGCTAGCCAGGAGGA+GGG | - | chr4_3:58284894-58284913 | Msa0650990:CDS | 55.0% |
| !! | CAGGCGCTGGGACAAATTTG+AGG | - | chr4_3:58285075-58285094 | Msa0650990:CDS | 55.0% |
| TGAACCAAGCCGTTGCGAGT+AGG | - | chr4_3:58285721-58285740 | Msa0650990:intron | 55.0% | |
| GAACCAAGCCGTTGCGAGTA+GGG | - | chr4_3:58285722-58285741 | Msa0650990:intron | 55.0% | |
| AATCCCTACTCGCAACGGCT+TGG | + | chr4_3:58285728-58285747 | None:intergenic | 55.0% | |
| AGGCCCATGAGACAGCAATC+AGG | + | chr4_3:58285827-58285846 | None:intergenic | 55.0% | |
| TTGCTGTCTCATGGGCCTCA+TGG | - | chr4_3:58285829-58285848 | Msa0650990:intron | 55.0% | |
| GTTAGGGAGCTCCTAGGACT+AGG | - | chr4_3:58286236-58286255 | Msa0650990:CDS | 55.0% | |
| CCAAACACGCTCCTAGTCCT+AGG | + | chr4_3:58286250-58286269 | None:intergenic | 55.0% | |
| ! | CCTAGGACTAGGAGCGTGTT+TGG | - | chr4_3:58286247-58286266 | Msa0650990:CDS | 55.0% |
| !! | GAGCGTGTTTGGCTTTGGGT+TGG | - | chr4_3:58286258-58286277 | Msa0650990:CDS | 55.0% |
| GGGGAGCGATTCCGAGGAAT+GGG | + | chr4_3:58278536-58278555 | None:intergenic | 60.0% | |
| TGGGGAGCGATTCCGAGGAA+TGG | + | chr4_3:58278537-58278556 | None:intergenic | 60.0% | |
| TTCCTCGGAATCGCTCCCCA+AGG | - | chr4_3:58278537-58278556 | Msa0650990:three_prime_UTR | 60.0% | |
| AACCTTGGGGAGCGATTCCG+AGG | + | chr4_3:58278542-58278561 | None:intergenic | 60.0% | |
| !! | CAGGTTCATCGGTGCCATCG+GGG | + | chr4_3:58278744-58278763 | None:intergenic | 60.0% |
| !! | CCAGGTTCATCGGTGCCATC+GGG | + | chr4_3:58278745-58278764 | None:intergenic | 60.0% |
| AGAGGGCTCTCCGGTTGATC+AGG | - | chr4_3:58280978-58280997 | Msa0650990:CDS | 60.0% | |
| CAGTGGCACAGATGGATGGG+TGG | + | chr4_3:58281300-58281319 | None:intergenic | 60.0% | |
| CACCCATCCATCTGTGCCAC+TGG | - | chr4_3:58281298-58281317 | Msa0650990:intron | 60.0% | |
| CCCCAGTGGCACAGATGGAT+GGG | + | chr4_3:58281303-58281322 | None:intergenic | 60.0% | |
| ! | CCCATCCATCTGTGCCACTG+GGG | - | chr4_3:58281300-58281319 | Msa0650990:intron | 60.0% |
| CGAGTGATGTGACCTGCGAG+TGG | + | chr4_3:58283208-58283227 | None:intergenic | 60.0% | |
| GTGCCAGCTCATGGAATCCG+TGG | + | chr4_3:58283509-58283528 | None:intergenic | 60.0% | |
| GGTGGGATTGTGCCAGCTCA+TGG | + | chr4_3:58283518-58283537 | None:intergenic | 60.0% | |
| GGCCATTCCACCACCCGTTT+GGG | - | chr4_3:58284915-58284934 | Msa0650990:CDS | 60.0% | |
| GCCATTCCACCACCCGTTTG+GGG | - | chr4_3:58284916-58284935 | Msa0650990:CDS | 60.0% | |
| !! | ACCCCAAACGGGTGGTGGAA+TGG | + | chr4_3:58284920-58284939 | None:intergenic | 60.0% |
| ! | TCCACCACCCGTTTGGGGTA+AGG | - | chr4_3:58284921-58284940 | Msa0650990:CDS | 60.0% |
| ACCTTACCCCAAACGGGTGG+TGG | + | chr4_3:58284925-58284944 | None:intergenic | 60.0% | |
| TGTCTCATGGGCCTCATGGC+AGG | - | chr4_3:58285833-58285852 | Msa0650990:intron | 60.0% | |
| TTCCTGACAAAGGGCTGGGG+TGG | + | chr4_3:58285875-58285894 | None:intergenic | 60.0% | |
| GTTGGGGTTAGGGAGCTCCT+AGG | - | chr4_3:58286230-58286249 | Msa0650990:CDS | 60.0% | |
| !! | CCCGATGGCACCGATGAACC+TGG | - | chr4_3:58278742-58278761 | Msa0650990:three_prime_UTR | 65.0% |
| GCCCCAGTGGCACAGATGGA+TGG | + | chr4_3:58281304-58281323 | None:intergenic | 65.0% | |
| TGGTGGAATGGCCCTCCTCC+TGG | + | chr4_3:58284908-58284927 | None:intergenic | 65.0% | |
| GGGCCATTCCACCACCCGTT+TGG | - | chr4_3:58284914-58284933 | Msa0650990:CDS | 65.0% | |
| AGCCACCCCAGCCCTTTGTC+AGG | - | chr4_3:58285870-58285889 | Msa0650990:intron | 65.0% | |
| GGTACATCGGCGTGTCCGCG+TGG | - | chr4_3:58278848-58278867 | Msa0650990:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 58278188 | 58286746 | 58278188 | ID=Msa0650990;Name=Msa0650990 |
| chr4_3 | mRNA | 58278188 | 58286746 | 58278188 | ID=Msa0650990-mRNA-1;Parent=Msa0650990;Name=Msa0650990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=262|1|1|1|0.93|0.88|17|619|636 |
| chr4_3 | exon | 58278188 | 58278784 | 58278188 | ID=Msa0650990-mRNA-1:exon:15395;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58278862 | 58278946 | 58278862 | ID=Msa0650990-mRNA-1:exon:15394;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58279028 | 58279079 | 58279028 | ID=Msa0650990-mRNA-1:exon:15393;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58279196 | 58279257 | 58279196 | ID=Msa0650990-mRNA-1:exon:15392;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58279769 | 58279856 | 58279769 | ID=Msa0650990-mRNA-1:exon:15391;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58279997 | 58280065 | 58279997 | ID=Msa0650990-mRNA-1:exon:15390;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58280186 | 58280243 | 58280186 | ID=Msa0650990-mRNA-1:exon:15389;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58280348 | 58280449 | 58280348 | ID=Msa0650990-mRNA-1:exon:15388;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58280528 | 58280632 | 58280528 | ID=Msa0650990-mRNA-1:exon:15387;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58280715 | 58281045 | 58280715 | ID=Msa0650990-mRNA-1:exon:15386;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58283170 | 58283262 | 58283170 | ID=Msa0650990-mRNA-1:exon:15385;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58283395 | 58283490 | 58283395 | ID=Msa0650990-mRNA-1:exon:15384;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58283935 | 58284164 | 58283935 | ID=Msa0650990-mRNA-1:exon:15383;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58284875 | 58285114 | 58284875 | ID=Msa0650990-mRNA-1:exon:15382;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58285990 | 58286085 | 58285990 | ID=Msa0650990-mRNA-1:exon:15381;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58286171 | 58286287 | 58286171 | ID=Msa0650990-mRNA-1:exon:15380;Parent=Msa0650990-mRNA-1 |
| chr4_3 | exon | 58286376 | 58286746 | 58286376 | ID=Msa0650990-mRNA-1:exon:15379;Parent=Msa0650990-mRNA-1 |
| chr4_3 | five_prime_UTR | 58286485 | 58286746 | 58286485 | ID=Msa0650990-mRNA-1:five_prime_utr;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58286376 | 58286484 | 58286376 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58286171 | 58286287 | 58286171 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58285990 | 58286085 | 58285990 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58284875 | 58285114 | 58284875 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58283935 | 58284164 | 58283935 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58283395 | 58283490 | 58283395 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58283170 | 58283262 | 58283170 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58280715 | 58281045 | 58280715 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58280528 | 58280632 | 58280528 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58280348 | 58280449 | 58280348 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58280186 | 58280243 | 58280186 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58279997 | 58280065 | 58279997 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58279769 | 58279856 | 58279769 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58279196 | 58279257 | 58279196 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58279028 | 58279079 | 58279028 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | CDS | 58278884 | 58278946 | 58278884 | ID=Msa0650990-mRNA-1:cds;Parent=Msa0650990-mRNA-1 |
| chr4_3 | three_prime_UTR | 58278862 | 58278883 | 58278862 | ID=Msa0650990-mRNA-1:three_prime_utr;Parent=Msa0650990-mRNA-1 |
| chr4_3 | three_prime_UTR | 58278188 | 58278784 | 58278188 | ID=Msa0650990-mRNA-1:three_prime_utr;Parent=Msa0650990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
