Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610290 | XP_013456788.1 | 94.876 | 644 | 18 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610290 | sp|Q9FM96|PSL4_ARATH | 57.188 | 633 | 234 | 13 | 21 | 629 | 28 | 647 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0610290 | 0.808862 | 2.513678e-50 | -8.615850e-47 |
| Msa0610290 | Msa0650990 | 0.828263 | 9.908018e-55 | -8.615850e-47 |
| Msa0610290 | Msa0758030 | 0.813402 | 2.606100e-51 | -8.615850e-47 |
| Msa0610290 | Msa0930770 | 0.828894 | 6.974977e-55 | -8.615850e-47 |
| Msa0610290 | Msa1400850 | 0.804097 | 2.544463e-49 | -8.615850e-47 |
| Msa0204950 | Msa0610290 | 0.804324 | 2.281090e-49 | -8.615850e-47 |
| Msa0249850 | Msa0610290 | 0.820642 | 6.157869e-53 | -8.615850e-47 |
| Msa0276860 | Msa0610290 | 0.801424 | 9.063858e-49 | -8.615850e-47 |
| Msa0563090 | Msa0610290 | 0.809429 | 1.900553e-50 | -8.615850e-47 |
| Msa0574900 | Msa0610290 | 0.840243 | 9.778266e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610290 | MtrunA17_Chr4g0043321 | 94.876 | 644 | 18 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1230 |
| Msa0610290 | MtrunA17_Chr4g0040841 | 59.836 | 122 | 48 | 1 | 11 | 132 | 8 | 128 | 1.66e-43 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610290 | AT5G56360.1 | 57.188 | 633 | 234 | 13 | 21 | 629 | 28 | 647 | 0.0 | 617 |
| Msa0610290 | AT2G42390.1 | 58.333 | 132 | 49 | 3 | 1 | 132 | 1 | 126 | 3.30e-45 | 160 |
Find 193 sgRNAs with CRISPR-Local
Find 576 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAACTCATCACGGCTTTC+TGG | 0.130781 | 4_2:+58005459 | None:intergenic |
| ACCCCAGCCAATACCAAATT+TGG | 0.144694 | 4_2:+58005271 | None:intergenic |
| AACTCATTCTAACCAAAATT+TGG | 0.181117 | 4_2:+58005006 | None:intergenic |
| CCAGCCTCCCAGCATGTATT+TGG | 0.202598 | 4_2:+58011601 | None:intergenic |
| GAGATTCTAAAACCAAATTT+TGG | 0.212338 | 4_2:-58005018 | Msa0610290:three_prime_UTR |
| TACTAGAGCTTACCCAAATT+TGG | 0.239918 | 4_2:-58005284 | Msa0610290:three_prime_UTR |
| TGACAAAACTGGTACGAATT+TGG | 0.243728 | 4_2:-58013197 | Msa0610290:five_prime_UTR |
| GGCCATTCCACCACCCGTTT+GGG | 0.243752 | 4_2:-58006571 | Msa0610290:CDS |
| AAAGAAGAAAGTATACTTAA+AGG | 0.252920 | 4_2:-58011448 | Msa0610290:CDS |
| ATAAAGATCTCCTTTGAAAA+TGG | 0.255299 | 4_2:+58005085 | None:intergenic |
| GATTCCGAGGAATGGGTCTT+TGG | 0.265562 | 4_2:+58012939 | None:intergenic |
| TCCTGGCTAGCCTGTTTATA+GGG | 0.289800 | 4_2:+58006598 | None:intergenic |
| ACTAGGAGCGTGTTTGGCTT+TGG | 0.297811 | 4_2:-58005233 | Msa0610290:three_prime_UTR |
| AATTCCTGTATCTTCTTCAT+TGG | 0.303497 | 4_2:+58010584 | None:intergenic |
| CTAGGAGCGTGTTTGGCTTT+GGG | 0.307074 | 4_2:-58005232 | Msa0610290:three_prime_UTR |
| GAGGAATGGGTCTTTGGGTT+TGG | 0.310876 | 4_2:+58012945 | None:intergenic |
| ATTTGGTATTGGCTGGGGTT+AGG | 0.314776 | 4_2:-58005267 | Msa0610290:three_prime_UTR |
| AAGAAGAAAGTATACTTAAA+GGG | 0.318461 | 4_2:-58011447 | Msa0610290:CDS |
| AATGAATAAAACTCCTTTGC+TGG | 0.318818 | 4_2:+58006793 | None:intergenic |
| GGGCCATTCCACCACCCGTT+TGG | 0.326302 | 4_2:-58006572 | Msa0610290:CDS |
| GCTCTAGTATACAAAACTTA+AGG | 0.330616 | 4_2:+58005298 | None:intergenic |
| TGAGGATTCATACAAAATAA+TGG | 0.332168 | 4_2:-58006393 | Msa0610290:CDS |
| CTCCTGGCTAGCCTGTTTAT+AGG | 0.335387 | 4_2:+58006597 | None:intergenic |
| CAGCCTCCCAGCATGTATTT+GGG | 0.344775 | 4_2:+58011602 | None:intergenic |
| TTTGGTATTGGCTGGGGTTA+GGG | 0.347819 | 4_2:-58005266 | Msa0610290:three_prime_UTR |
| AGCTTACCCAAATTTGGTAT+TGG | 0.354114 | 4_2:-58005278 | Msa0610290:three_prime_UTR |
| TTTCTAATGGTGATCATTGC+TGG | 0.357080 | 4_2:-58006367 | Msa0610290:CDS |
| TCTGAAACTGATTTGACAAC+TGG | 0.358865 | 4_2:-58009757 | Msa0610290:CDS |
| CTCTAGTATACAAAACTTAA+GGG | 0.365596 | 4_2:+58005299 | None:intergenic |
| TCCTTATGTCTCATCTGGTT+TGG | 0.367667 | 4_2:-58005202 | Msa0610290:three_prime_UTR |
| GGGAGTCCTTATGTCTCATC+TGG | 0.368488 | 4_2:-58005207 | Msa0610290:three_prime_UTR |
| ATCTGTATGGAATATTATTC+AGG | 0.371491 | 4_2:-58007138 | Msa0610290:CDS |
| TACCCAAATTTGGTATTGGC+TGG | 0.373990 | 4_2:-58005274 | Msa0610290:three_prime_UTR |
| CCTAGGACTAGGAGCGTGTT+TGG | 0.377315 | 4_2:-58005239 | Msa0610290:three_prime_UTR |
| TTACTCAGTTATTAATTGTA+AGG | 0.379705 | 4_2:+58013278 | None:intergenic |
| TATATCTTCGTCATATTTGC+CGG | 0.384323 | 4_2:+58007374 | None:intergenic |
| AAACTCAAATGAATCTTAAC+TGG | 0.386832 | 4_2:-58005435 | Msa0610290:intron |
| ATTAATAACTGAGTAATATC+AGG | 0.388048 | 4_2:-58013271 | Msa0610290:five_prime_UTR |
| AGCGTGTTTGGCTTTGGGTT+GGG | 0.393248 | 4_2:-58005227 | Msa0610290:three_prime_UTR |
| ATTCCGAGGAATGGGTCTTT+GGG | 0.400938 | 4_2:+58012940 | None:intergenic |
| TTTCTTCCTGACAAAGGGCT+GGG | 0.402523 | 4_2:+58005610 | None:intergenic |
| CATACCTTCAAACTCCTATC+AGG | 0.404765 | 4_2:+58006338 | None:intergenic |
| CCAAATACATGCTGGGAGGC+TGG | 0.405666 | 4_2:-58011601 | Msa0610290:CDS |
| CTGACTGATTCACGGGTGTC+TGG | 0.405932 | 4_2:+58007102 | None:intergenic |
| CTACGCAGATACCGTATTGA+TGG | 0.406515 | 4_2:+58009711 | None:intergenic |
| AGAGGGCTCTCCGGTTGATC+AGG | 0.406967 | 4_2:-58010487 | Msa0610290:intron |
| CAAAGTCTGCCCCTATAAAC+AGG | 0.407002 | 4_2:-58006608 | Msa0610290:CDS |
| GCGACAGAAACGTCCCGTTA+TGG | 0.411468 | 4_2:+58013094 | None:intergenic |
| GAGCGTGTTTGGCTTTGGGT+TGG | 0.414636 | 4_2:-58005228 | Msa0610290:three_prime_UTR |
| CAAGCTAGACCTACTGAATT+CGG | 0.417093 | 4_2:-58005487 | Msa0610290:CDS |
| TTCATTGTCTAATGCAGTGT+TGG | 0.417389 | 4_2:+58007470 | None:intergenic |
| TGGTGGAATGGCCCTCCTCC+TGG | 0.417770 | 4_2:+58006581 | None:intergenic |
| AGCAATTGAACACGCACATT+TGG | 0.418179 | 4_2:-58011509 | Msa0610290:CDS |
| CCAGGTTCATCGGTGCCATC+GGG | 0.421592 | 4_2:+58012723 | None:intergenic |
| TACAATCGAACCTGATCAAC+CGG | 0.423911 | 4_2:+58010477 | None:intergenic |
| TACCAAAACCTTACCCCAAA+CGG | 0.426842 | 4_2:+58006557 | None:intergenic |
| ACCCAAATTTGGTATTGGCT+GGG | 0.427869 | 4_2:-58005273 | Msa0610290:three_prime_UTR |
| CCCCTATAAACAGGCTAGCC+AGG | 0.438029 | 4_2:-58006599 | Msa0610290:CDS |
| CTGATCTTTGTTGAAATTAG+CGG | 0.439746 | 4_2:+58012770 | None:intergenic |
| CTTGTTGCTTCACGTTGGAC+AGG | 0.441661 | 4_2:-58007522 | Msa0610290:CDS |
| AGGATCCTTGTTTGATAAAG+TGG | 0.441971 | 4_2:-58009953 | Msa0610290:CDS |
| AGCCACCCCAGCCCTTTGTC+AGG | 0.449068 | 4_2:-58005616 | Msa0610290:CDS |
| GGGGTTGTGAAACAGTTAAA+AGG | 0.449128 | 4_2:-58011427 | Msa0610290:intron |
| CAGGCGCTGGGACAAATTTG+AGG | 0.449184 | 4_2:-58006411 | Msa0610290:CDS |
| ACCAGGTTCATCGGTGCCAT+CGG | 0.449789 | 4_2:+58012722 | None:intergenic |
| GAGAGTGAACCAGACTTGTC+AGG | 0.450153 | 4_2:-58007288 | Msa0610290:intron |
| AATAGACAAGGCTGAGGAAA+AGG | 0.453522 | 4_2:-58010682 | Msa0610290:CDS |
| TTAAAATCACAATGACTACT+TGG | 0.454936 | 4_2:-58005136 | Msa0610290:three_prime_UTR |
| ATCTCCTTTGAAAATGGAAC+GGG | 0.456810 | 4_2:+58005091 | None:intergenic |
| ATTGCTGGAACGGTCCTGAT+AGG | 0.460707 | 4_2:-58006352 | Msa0610290:CDS |
| AAAAGAAGAGAAACAGAAGA+AGG | 0.462480 | 4_2:-58010643 | Msa0610290:CDS |
| TTTAGAAATTGAACAAAAGA+GGG | 0.463031 | 4_2:+58013060 | None:intergenic |
| GAAGAAGGAGGCTGAGGAAA+AGG | 0.463951 | 4_2:-58010628 | Msa0610290:CDS |
| CCCCAGCCAATACCAAATTT+GGG | 0.464599 | 4_2:+58005272 | None:intergenic |
| CCCGATGGCACCGATGAACC+TGG | 0.467529 | 4_2:-58012723 | Msa0610290:intron |
| ACTTTCTTATAGGATGAAGC+TGG | 0.469184 | 4_2:-58010033 | Msa0610290:intron |
| ACCAAAACCTTACCCCAAAC+GGG | 0.470971 | 4_2:+58006558 | None:intergenic |
| AGAAAATACAGAAATCTGTA+TGG | 0.474370 | 4_2:-58007151 | Msa0610290:CDS |
| GGGGAGCGATTCCGAGGAAT+GGG | 0.478435 | 4_2:+58012932 | None:intergenic |
| CCAAACACGCTCCTAGTCCT+AGG | 0.479154 | 4_2:+58005239 | None:intergenic |
| ACCTTACCCCAAACGGGTGG+TGG | 0.480378 | 4_2:+58006564 | None:intergenic |
| TGCATTAGACAATGAAGATC+AGG | 0.480617 | 4_2:-58007463 | Msa0610290:CDS |
| CCCAAATTTGGTATTGGCTG+GGG | 0.480761 | 4_2:-58005272 | Msa0610290:three_prime_UTR |
| TGGGGAGCGATTCCGAGGAA+TGG | 0.481598 | 4_2:+58012931 | None:intergenic |
| ACCCCAAACGGGTGGTGGAA+TGG | 0.481723 | 4_2:+58006569 | None:intergenic |
| TGAGAAAATTGAAGTTAAAG+AGG | 0.483030 | 4_2:-58010505 | Msa0610290:CDS |
| TATAACAAACCTGACAAGTC+TGG | 0.483214 | 4_2:+58007279 | None:intergenic |
| AAAACCAATGAAGAAGATAC+AGG | 0.483963 | 4_2:-58010588 | Msa0610290:CDS |
| GTTAGGGAGCTCCTAGGACT+AGG | 0.486760 | 4_2:-58005250 | Msa0610290:three_prime_UTR |
| GTTTAGAAATTGAACAAAAG+AGG | 0.488040 | 4_2:+58013059 | None:intergenic |
| TTCTTCCTGACAAAGGGCTG+GGG | 0.488589 | 4_2:+58005611 | None:intergenic |
| CTCTTCCACTTTATCAAACA+AGG | 0.488744 | 4_2:+58009948 | None:intergenic |
| CTTTCTTATAGGATGAAGCT+GGG | 0.488948 | 4_2:-58010032 | Msa0610290:intron |
| CTTGTTTGATAAAGTGGAAG+AGG | 0.495036 | 4_2:-58009947 | Msa0610290:intron |
| CAAATACATGCTGGGAGGCT+GGG | 0.498891 | 4_2:-58011600 | Msa0610290:CDS |
| CTGGTTGTTCCGAATTCAGT+AGG | 0.499226 | 4_2:+58005478 | None:intergenic |
| TTCCTGACAAAGGGCTGGGG+TGG | 0.501335 | 4_2:+58005614 | None:intergenic |
| CAAAGTGCCCAAATACATGC+TGG | 0.502257 | 4_2:-58011609 | Msa0610290:CDS |
| CAGATTTGTATGAGGAACTA+AGG | 0.503712 | 4_2:+58007316 | None:intergenic |
| TGAACACGCACATTTGGCTC+TGG | 0.506028 | 4_2:-58011503 | Msa0610290:CDS |
| CAGACACCCGTGAATCAGTC+AGG | 0.506973 | 4_2:-58007101 | Msa0610290:intron |
| TGAAGTTAAAGAGGGCTCTC+CGG | 0.513998 | 4_2:-58010496 | Msa0610290:CDS |
| GGTTTGGATGAAGAAGAGAA+TGG | 0.518565 | 4_2:+58012961 | None:intergenic |
| GGATTGTCAAAGGAAGAATT+AGG | 0.518607 | 4_2:-58007549 | Msa0610290:CDS |
| CGCACATTTGGCTCTGGAGA+AGG | 0.520642 | 4_2:-58011497 | Msa0610290:CDS |
| GCTGGGGTTAGGGAGCTCCT+AGG | 0.523806 | 4_2:-58005256 | Msa0610290:three_prime_UTR |
| GAAACAGAAGAAGGAGGCTG+AGG | 0.526794 | 4_2:-58010634 | Msa0610290:CDS |
| TTTGGTGATGATATTGAATG+AGG | 0.527461 | 4_2:-58013179 | Msa0610290:five_prime_UTR |
| TTTGACGCCCTCTTGATATG+TGG | 0.528509 | 4_2:+58011543 | None:intergenic |
| GCACAACAGATGACCCTTCG+TGG | 0.528602 | 4_2:-58007178 | Msa0610290:CDS |
| ATGTCTACCTGACTGATTCA+CGG | 0.529282 | 4_2:+58007094 | None:intergenic |
| AACAGCTAGTATGAAGATCA+TGG | 0.529848 | 4_2:-58005341 | Msa0610290:intron |
| GTTTGGATGAAGAAGAGAAT+GGG | 0.530013 | 4_2:+58012962 | None:intergenic |
| TCCTTCACTTTCAGAATCAG+TGG | 0.530933 | 4_2:+58009972 | None:intergenic |
| GATGTAATAAGATGTAAAGA+TGG | 0.532369 | 4_2:-58012795 | Msa0610290:CDS |
| AATCCCTACTCGCAACGGCT+TGG | 0.532996 | 4_2:+58005761 | None:intergenic |
| CGGTCCTGATAGGAGTTTGA+AGG | 0.533208 | 4_2:-58006342 | Msa0610290:intron |
| GATACGCTAGTGTCCATAAC+GGG | 0.535879 | 4_2:-58013107 | Msa0610290:five_prime_UTR |
| GAAGCATCTGAGAATACTGA+TGG | 0.537435 | 4_2:-58007570 | Msa0610290:CDS |
| TGTCTACCTGACTGATTCAC+GGG | 0.537621 | 4_2:+58007095 | None:intergenic |
| GATTTCTGCGATTGCCCCGA+TGG | 0.539680 | 4_2:-58012738 | Msa0610290:CDS |
| ACAAATAATGAAGAGAATGA+AGG | 0.542197 | 4_2:-58007423 | Msa0610290:CDS |
| TTCTGATGAAGCCATCAATA+CGG | 0.542935 | 4_2:-58009722 | Msa0610290:intron |
| AGAAGAAAGTATACTTAAAG+GGG | 0.543603 | 4_2:-58011446 | Msa0610290:CDS |
| GGGTGTCTGGAATATATTGA+CGG | 0.546399 | 4_2:+58007115 | None:intergenic |
| CGAGTCAATGATGGAATTTG+CGG | 0.553365 | 4_2:-58012542 | Msa0610290:intron |
| CTTTGGTATTGCAGGTACAT+CGG | 0.554528 | 4_2:-58012630 | Msa0610290:intron |
| CGAGACGAAAACAGAGACAC+AGG | 0.554823 | 4_2:+58012563 | None:intergenic |
| TAAACAGGCTAGCCAGGAGG+AGG | 0.555074 | 4_2:-58006593 | Msa0610290:CDS |
| TTATGTTTAGATTGCTGTGA+TGG | 0.562355 | 4_2:-58011655 | Msa0610290:intron |
| GCCAAACCAGATGAGACATA+AGG | 0.563949 | 4_2:+58005201 | None:intergenic |
| TGTCAAAGGAAGAATTAGGC+AGG | 0.563992 | 4_2:-58007545 | Msa0610290:CDS |
| CTCAACGTCAGATTTGTATG+AGG | 0.565568 | 4_2:+58007308 | None:intergenic |
| AACAGGTCAAGCTAAAATGC+GGG | 0.566211 | 4_2:-58005814 | Msa0610290:intron |
| AAATGGAACGGGCAATCTGA+AGG | 0.566678 | 4_2:+58005102 | None:intergenic |
| GAGAAAATTGAAGTTAAAGA+GGG | 0.567079 | 4_2:-58010504 | Msa0610290:CDS |
| GAATGCAAAAGAAGCTGAGA+GGG | 0.568138 | 4_2:-58009794 | Msa0610290:CDS |
| CACACTAGAACGGTATAAGA+TGG | 0.568632 | 4_2:+58004938 | None:intergenic |
| AGAATGGAAACCAGGTTCAT+CGG | 0.576515 | 4_2:+58012713 | None:intergenic |
| AATGGTGATCATTGCTGGAA+CGG | 0.578500 | 4_2:-58006362 | Msa0610290:CDS |
| GGAAAAGGAGCGTTTACAGA+AGG | 0.581537 | 4_2:-58010667 | Msa0610290:CDS |
| CGTTGGACAGGAGAAGATGT+TGG | 0.584656 | 4_2:-58007510 | Msa0610290:CDS |
| AACCTTGGGGAGCGATTCCG+AGG | 0.585592 | 4_2:+58012926 | None:intergenic |
| TTTGGCTCTGGAGAAGGATG+AGG | 0.585737 | 4_2:-58011491 | Msa0610290:CDS |
| GCAGGCTTGTTGCTTCACGT+TGG | 0.589123 | 4_2:-58007527 | Msa0610290:CDS |
| AAACGATGAAGAATTTCAAG+AGG | 0.591771 | 4_2:-58007352 | Msa0610290:CDS |
| GCCATTCCACCACCCGTTTG+GGG | 0.596501 | 4_2:-58006570 | Msa0610290:intron |
| GAATACTGATGGATTGTCAA+AGG | 0.597321 | 4_2:-58007559 | Msa0610290:CDS |
| AAACCCAAAGACCCATTCCT+CGG | 0.598704 | 4_2:-58012943 | Msa0610290:CDS |
| GATCTCCTTTGAAAATGGAA+CGG | 0.604030 | 4_2:+58005090 | None:intergenic |
| TAGAAATTGAACAAAAGAGG+GGG | 0.604122 | 4_2:+58013062 | None:intergenic |
| CCTGGCTAGCCTGTTTATAG+GGG | 0.604222 | 4_2:+58006599 | None:intergenic |
| CACAATGACTACTTGGTCTG+TGG | 0.605592 | 4_2:-58005129 | Msa0610290:three_prime_UTR |
| TACAGGAATTGAAAATGAAG+CGG | 0.607388 | 4_2:-58010571 | Msa0610290:CDS |
| AAAGTGCCCAAATACATGCT+GGG | 0.607920 | 4_2:-58011608 | Msa0610290:CDS |
| GAACAGGTCAAGCTAAAATG+CGG | 0.608720 | 4_2:-58005815 | Msa0610290:intron |
| AACTGATTTGACAACTGGAA+AGG | 0.613288 | 4_2:-58009752 | Msa0610290:CDS |
| ATAACAATCCCTACTCGCAA+CGG | 0.613583 | 4_2:+58005756 | None:intergenic |
| AAAGATTGCCACATATCAAG+AGG | 0.614060 | 4_2:-58011551 | Msa0610290:CDS |
| TTCCTCGGAATCGCTCCCCA+AGG | 0.616903 | 4_2:-58012928 | Msa0610290:intron |
| AGAAGAGAAACAGAAGAAGG+AGG | 0.617934 | 4_2:-58010640 | Msa0610290:CDS |
| GCCACTGATTCTGAAAGTGA+AGG | 0.619286 | 4_2:-58009973 | Msa0610290:CDS |
| ACGCGAGGAGAAGAGAAATG+AGG | 0.624983 | 4_2:+58012992 | None:intergenic |
| AGAACAAATAGACAAGGCTG+AGG | 0.625081 | 4_2:-58010688 | Msa0610290:CDS |
| AGATGCTGCTCGTATACGCA+AGG | 0.627154 | 4_2:-58007003 | Msa0610290:CDS |
| GTCTAGGAATCACACTAGAA+CGG | 0.628998 | 4_2:+58004928 | None:intergenic |
| TCTGAAACTGACGACGACAC+CGG | 0.629370 | 4_2:-58007393 | Msa0610290:CDS |
| CAATGCTACAGGTCCAGCAA+AGG | 0.629416 | 4_2:-58006806 | Msa0610290:intron |
| AGAAATTGAACAAAAGAGGG+GGG | 0.629996 | 4_2:+58013063 | None:intergenic |
| CGATACGCTAGTGTCCATAA+CGG | 0.632084 | 4_2:-58013108 | Msa0610290:five_prime_UTR |
| GAGACGAAAACAGAGACACA+GGG | 0.636956 | 4_2:+58012564 | None:intergenic |
| TTTCTCATGAATACTTGCCG+CGG | 0.637229 | 4_2:+58010521 | None:intergenic |
| TTAGAAATTGAACAAAAGAG+GGG | 0.637796 | 4_2:+58013061 | None:intergenic |
| GATGGAAGTGATGAATATGA+TGG | 0.639953 | 4_2:-58011637 | Msa0610290:CDS |
| ATCAGTTTCAGATTCAACAG+TGG | 0.643721 | 4_2:+58009768 | None:intergenic |
| TTTCTTATAGGATGAAGCTG+GGG | 0.646594 | 4_2:-58010031 | Msa0610290:intron |
| TTGTCAGGAAGAAAAGCTGA+AGG | 0.652990 | 4_2:-58005601 | Msa0610290:intron |
| GGTACATCGGCGTGTCCGCG+TGG | 0.653397 | 4_2:-58012617 | Msa0610290:CDS |
| ACACGATGCAAAATACTAGA+CGG | 0.663631 | 4_2:-58005045 | Msa0610290:three_prime_UTR |
| AAGATTGCCACATATCAAGA+GGG | 0.666614 | 4_2:-58011550 | Msa0610290:CDS |
| AAACAGGCTAGCCAGGAGGA+GGG | 0.674511 | 4_2:-58006592 | Msa0610290:CDS |
| ATCAGGAAGATATTCTACAC+GGG | 0.675112 | 4_2:-58007446 | Msa0610290:CDS |
| GATCAGGAAGATATTCTACA+CGG | 0.678925 | 4_2:-58007447 | Msa0610290:CDS |
| AGAATGCAAAAGAAGCTGAG+AGG | 0.679629 | 4_2:-58009795 | Msa0610290:CDS |
| AAAACCTTACCCCAAACGGG+TGG | 0.683329 | 4_2:+58006561 | None:intergenic |
| TCATAAAGAACAAATAGACA+AGG | 0.689258 | 4_2:-58010694 | Msa0610290:CDS |
| CTATAAACAGGCTAGCCAGG+AGG | 0.720671 | 4_2:-58006596 | Msa0610290:CDS |
| AGACATCAAAGACAATTCCG+CGG | 0.722504 | 4_2:-58010538 | Msa0610290:CDS |
| CAGGTTCATCGGTGCCATCG+GGG | 0.723293 | 4_2:+58012724 | None:intergenic |
| GTGCCCAAATACATGCTGGG+AGG | 0.724802 | 4_2:-58011605 | Msa0610290:CDS |
| AGAATGGGACGAGAAACGCG+AGG | 0.754935 | 4_2:+58012977 | None:intergenic |
| AGACGAAAACAGAGACACAG+GGG | 0.769467 | 4_2:+58012565 | None:intergenic |
| CGACAGTAAAATGTTCCACG+CGG | 0.787877 | 4_2:+58012602 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTGTACTTTTTA+AGG | - | chr4_2:58009048-58009067 | Msa0610290:intron | 10.0% |
| !!! | ATAAATTTTAAAACATTGTT+AGG | - | chr4_2:58009550-58009569 | Msa0610290:intron | 10.0% |
| !! | AGATAAAAATGTGTAAAAAA+TGG | + | chr4_2:58005148-58005167 | None:intergenic | 15.0% |
| !! | AAATAAAATAAAAGAGAGAA+TGG | + | chr4_2:58005341-58005360 | None:intergenic | 15.0% |
| !!! | ACTTCTAAATTTTTAAGTAT+AGG | + | chr4_2:58005812-58005831 | None:intergenic | 15.0% |
| !!! | TTACTTTTTGACATTAATTT+TGG | - | chr4_2:58005864-58005883 | Msa0610290:intron | 15.0% |
| !!! | ATAATAGATTTATTTTGCAT+TGG | - | chr4_2:58006814-58006833 | Msa0610290:intron | 15.0% |
| !!! | TATTTATTGAGTATTTTTCT+TGG | - | chr4_2:58008631-58008650 | Msa0610290:intron | 15.0% |
| !! | AAAAAGTTTCATGTATAAAT+AGG | + | chr4_2:58009413-58009432 | None:intergenic | 15.0% |
| !! | GAGTCTAATAAAAAAAATTA+AGG | + | chr4_2:58009584-58009603 | None:intergenic | 15.0% |
| !!! | GGTGTTTATTTATTTTAAAT+TGG | + | chr4_2:58009606-58009625 | None:intergenic | 15.0% |
| !! | TTAATTCAAATGTTTATCAA+AGG | - | chr4_2:58010782-58010801 | Msa0610290:intron | 15.0% |
| !! | TAATTCAAATGTTTATCAAA+GGG | - | chr4_2:58010783-58010802 | Msa0610290:intron | 15.0% |
| !! | ATTGTATCTATTCATTAAAA+CGG | - | chr4_2:58011775-58011794 | Msa0610290:intron | 15.0% |
| !! | CTAAAGTAATTATATTCATT+TGG | - | chr4_2:58011879-58011898 | Msa0610290:intron | 15.0% |
| !!! | TGTAATTTTTTTTTATGAAG+TGG | - | chr4_2:58012170-58012189 | Msa0610290:intron | 15.0% |
| !!! | ATTATTAATTTTAGATGAAG+TGG | - | chr4_2:58013058-58013077 | Msa0610290:five_prime_UTR | 15.0% |
| !! | AACAAAATATAAAAAAGTCT+AGG | + | chr4_2:58013126-58013145 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTTTGTTTGCA+TGG | - | chr4_2:58013130-58013149 | Msa0610290:five_prime_UTR | 15.0% |
| !! | ATTAATAACTGAGTAATATC+AGG | - | chr4_2:58004764-58004783 | Msa0610290:three_prime_UTR | 20.0% |
| !! | TTTAGAAATTGAACAAAAGA+GGG | + | chr4_2:58004978-58004997 | None:intergenic | 20.0% |
| !!! | AACACTCAATATGTTTTTAT+TGG | - | chr4_2:58005841-58005860 | Msa0610290:intron | 20.0% |
| !!! | ATTAATTTTGGTGTAGAAAT+TGG | - | chr4_2:58005876-58005895 | Msa0610290:intron | 20.0% |
| !!! | TTTTTTGCAAACACAAATTA+AGG | - | chr4_2:58005924-58005943 | Msa0610290:intron | 20.0% |
| !!! | TTTTACTTTGTTATTTTCTC+TGG | - | chr4_2:58005976-58005995 | Msa0610290:intron | 20.0% |
| !!! | AAAGAAGAAAGTATACTTAA+AGG | - | chr4_2:58006587-58006606 | Msa0610290:CDS | 20.0% |
| !!! | AAGAAGAAAGTATACTTAAA+GGG | - | chr4_2:58006588-58006607 | Msa0610290:CDS | 20.0% |
| !!! | TATCCTTTAAGACAAAATTA+AGG | + | chr4_2:58006692-58006711 | None:intergenic | 20.0% |
| !!! | CTGTCAATTTTTTTTTTCTA+TGG | + | chr4_2:58006749-58006768 | None:intergenic | 20.0% |
| !! | TAGAATAAAACACTTCAATA+AGG | + | chr4_2:58007628-58007647 | None:intergenic | 20.0% |
| !! | ACATACTTGCTTATTTAAAT+AGG | + | chr4_2:58007779-58007798 | None:intergenic | 20.0% |
| !! | AACATTGAAAACTTTCTTAT+AGG | - | chr4_2:58007992-58008011 | Msa0610290:intron | 20.0% |
| !! | AAAATCAAGTAAAAATGTTG+AGG | + | chr4_2:58008210-58008229 | None:intergenic | 20.0% |
| !! | AAATATTCTGCAATCATTTA+TGG | + | chr4_2:58008683-58008702 | None:intergenic | 20.0% |
| !! | CAGATTTAAACAAAATGAAA+AGG | - | chr4_2:58008774-58008793 | Msa0610290:intron | 20.0% |
| !! | TTAAACAAAATGAAAAGGAA+TGG | - | chr4_2:58008779-58008798 | Msa0610290:intron | 20.0% |
| !!! | ACAAATATTTAAAACAGTCA+GGG | + | chr4_2:58008979-58008998 | None:intergenic | 20.0% |
| !!! | TAATAAGTTTTTCGATTTTG+AGG | + | chr4_2:58009165-58009184 | None:intergenic | 20.0% |
| !!! | TTATTTTGAGTTCAATTTCT+TGG | + | chr4_2:58009258-58009277 | None:intergenic | 20.0% |
| !! | ATTTATACACAAACATTGAT+AGG | + | chr4_2:58009536-58009555 | None:intergenic | 20.0% |
| !!! | AGTATAAAGATGTCAAATTT+TGG | - | chr4_2:58010226-58010245 | Msa0610290:intron | 20.0% |
| !! | AAAAAACATCAATGAAAAGT+GGG | + | chr4_2:58010406-58010425 | None:intergenic | 20.0% |
| !!! | TTTTATATTCTCTGTAAAAG+AGG | - | chr4_2:58011577-58011596 | Msa0610290:CDS | 20.0% |
| !!! | AAAATAATGGTGTTTTCTAA+TGG | - | chr4_2:58011655-58011674 | Msa0610290:intron | 20.0% |
| !! | TTAACTCTTAAGAAAAAACA+TGG | + | chr4_2:58011938-58011957 | None:intergenic | 20.0% |
| !!! | TATTTTTTACGAGAAATGTA+AGG | + | chr4_2:58012064-58012083 | None:intergenic | 20.0% |
| !!! | TAATTAAATTGACTAGTTTG+TGG | - | chr4_2:58012095-58012114 | Msa0610290:intron | 20.0% |
| !!! | AATTAAATTGACTAGTTTGT+GGG | - | chr4_2:58012096-58012115 | Msa0610290:intron | 20.0% |
| !! | AAAAAATTGTTGAAAAAGGT+TGG | + | chr4_2:58013202-58013221 | None:intergenic | 20.0% |
| !!! | AACCTTTTTCAACAATTTTT+TGG | - | chr4_2:58013201-58013220 | Msa0610290:five_prime_UTR | 20.0% |
| ! | ACATAAAAATCTGACAAAAC+TGG | - | chr4_2:58004827-58004846 | Msa0610290:three_prime_UTR | 25.0% |
| ! | TTAGAAATTGAACAAAAGAG+GGG | + | chr4_2:58004977-58004996 | None:intergenic | 25.0% |
| ! | GTTTAGAAATTGAACAAAAG+AGG | + | chr4_2:58004979-58004998 | None:intergenic | 25.0% |
| ! | GATGTAATAAGATGTAAAGA+TGG | - | chr4_2:58005240-58005259 | Msa0610290:three_prime_UTR | 25.0% |
| ! | TTTGTTTCGTGTTGAATTAT+TGG | - | chr4_2:58005363-58005382 | Msa0610290:intron | 25.0% |
| !! | AAAGTCGGGTTTTTAAATAA+AGG | + | chr4_2:58005696-58005715 | None:intergenic | 25.0% |
| ! | TTGCAAAAAATAAAGTACAC+CGG | + | chr4_2:58005914-58005933 | None:intergenic | 25.0% |
| ! | AATGTAGATACCTAGATATA+TGG | - | chr4_2:58006018-58006037 | Msa0610290:intron | 25.0% |
| ! | GCAACATGACTAAAAATATA+TGG | + | chr4_2:58006130-58006149 | None:intergenic | 25.0% |
| !! | AACACAATACTTTTAGATCA+TGG | + | chr4_2:58006246-58006265 | None:intergenic | 25.0% |
| !! | AGAAGAAAGTATACTTAAAG+GGG | - | chr4_2:58006589-58006608 | Msa0610290:CDS | 25.0% |
| !! | CTACCTTAATTTTGTCTTAA+AGG | - | chr4_2:58006686-58006705 | Msa0610290:intron | 25.0% |
| !!! | TAGATTTATTTTGCATTGGT+AGG | - | chr4_2:58006818-58006837 | Msa0610290:intron | 25.0% |
| ! | TAGGATCAAGTTAATGTATA+AGG | - | chr4_2:58006837-58006856 | Msa0610290:intron | 25.0% |
| ! | ATGTATAAGGAAATCTGATT+AGG | - | chr4_2:58006850-58006869 | Msa0610290:intron | 25.0% |
| ! | CATATGTGTAATTAAACAGT+TGG | + | chr4_2:58006995-58007014 | None:intergenic | 25.0% |
| ! | TTCATCAATTGAGAATAGAT+GGG | + | chr4_2:58007031-58007050 | None:intergenic | 25.0% |
| !!! | AACACTTTCCTTGTTTTAAA+AGG | - | chr4_2:58007137-58007156 | Msa0610290:CDS | 25.0% |
| ! | GTTAAAGAAAGAATTCCATT+TGG | + | chr4_2:58007296-58007315 | None:intergenic | 25.0% |
| ! | TCATAAAGAACAAATAGACA+AGG | - | chr4_2:58007341-58007360 | Msa0610290:CDS | 25.0% |
| ! | TGAGAAAATTGAAGTTAAAG+AGG | - | chr4_2:58007530-58007549 | Msa0610290:CDS | 25.0% |
| ! | GAGAAAATTGAAGTTAAAGA+GGG | - | chr4_2:58007531-58007550 | Msa0610290:CDS | 25.0% |
| ! | CTTGCTTATTTAAATAGGTA+CGG | + | chr4_2:58007774-58007793 | None:intergenic | 25.0% |
| !! | GAAGAGGTGAATAAAATTTT+TGG | - | chr4_2:58008104-58008123 | Msa0610290:intron | 25.0% |
| ! | TTATATCTAATGAACACACA+TGG | + | chr4_2:58008182-58008201 | None:intergenic | 25.0% |
| ! | TCACTTAATCGACAATTATT+AGG | - | chr4_2:58008428-58008447 | Msa0610290:intron | 25.0% |
| ! | ACAATTATTAGGTCATAATG+AGG | - | chr4_2:58008439-58008458 | Msa0610290:intron | 25.0% |
| !!! | TCATAAAACTGACTTTTCTT+GGG | + | chr4_2:58008508-58008527 | None:intergenic | 25.0% |
| !!! | TCTAGTTTTTATGATATGAC+TGG | + | chr4_2:58008544-58008563 | None:intergenic | 25.0% |
| !! | ATAATCAAGTGCAATTGTTT+TGG | + | chr4_2:58008614-58008633 | None:intergenic | 25.0% |
| ! | AGACTAGATAACGTAATTAT+TGG | + | chr4_2:58008657-58008676 | None:intergenic | 25.0% |
| ! | GTTATGTAAATTGCAATCAA+TGG | - | chr4_2:58008925-58008944 | Msa0610290:intron | 25.0% |
| !!! | GCTTTAAACTCTTTTTTACT+GGG | - | chr4_2:58008947-58008966 | Msa0610290:intron | 25.0% |
| !! | CACAAATATTTAAAACAGTC+AGG | + | chr4_2:58008980-58008999 | None:intergenic | 25.0% |
| !!! | TTGTGTTTTGCAATTGATTT+TGG | - | chr4_2:58008995-58009014 | Msa0610290:intron | 25.0% |
| ! | GTAATGTATATAACAGGATA+AGG | + | chr4_2:58009125-58009144 | None:intergenic | 25.0% |
| ! | TTAGCAGAAAAAACATATCA+TGG | - | chr4_2:58009182-58009201 | Msa0610290:intron | 25.0% |
| ! | TTTCATGTATAAATAGGACT+AGG | + | chr4_2:58009407-58009426 | None:intergenic | 25.0% |
| ! | TAAACACCAATCACAAATAA+AGG | - | chr4_2:58009618-58009637 | Msa0610290:intron | 25.0% |
| !!! | ATTTTGATTGATAATGTGCT+AGG | - | chr4_2:58009976-58009995 | Msa0610290:CDS | 25.0% |
| !!! | TTTTGATTGATAATGTGCTA+GGG | - | chr4_2:58009977-58009996 | Msa0610290:CDS | 25.0% |
| ! | GAATTCAATTTGATAGGATT+GGG | + | chr4_2:58010109-58010128 | None:intergenic | 25.0% |
| ! | TGAATTCAATTTGATAGGAT+TGG | + | chr4_2:58010110-58010129 | None:intergenic | 25.0% |
| ! | AATCCTATCAAATTGAATTC+AGG | - | chr4_2:58010109-58010128 | Msa0610290:intron | 25.0% |
| ! | ATCCTATCAAATTGAATTCA+GGG | - | chr4_2:58010110-58010129 | Msa0610290:intron | 25.0% |
| !! | ATAAAGATGTCAAATTTTGG+CGG | - | chr4_2:58010229-58010248 | Msa0610290:intron | 25.0% |
| ! | AAAAACATCAATGAAAAGTG+GGG | + | chr4_2:58010405-58010424 | None:intergenic | 25.0% |
| ! | GAAAAAACATCAATGAAAAG+TGG | + | chr4_2:58010407-58010426 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTTTTCTCTTTG+TGG | - | chr4_2:58010418-58010437 | Msa0610290:intron | 25.0% |
| !!! | GTTTTTTCTTTTCTCTTTGT+GGG | - | chr4_2:58010419-58010438 | Msa0610290:intron | 25.0% |
| ! | TGGGTATATACATATCTTTA+GGG | - | chr4_2:58010438-58010457 | Msa0610290:intron | 25.0% |
| ! | ACAAATAATGAAGAGAATGA+AGG | - | chr4_2:58010612-58010631 | Msa0610290:CDS | 25.0% |
| ! | AGAAAATACAGAAATCTGTA+TGG | - | chr4_2:58010884-58010903 | Msa0610290:intron | 25.0% |
| ! | ATCTGTATGGAATATTATTC+AGG | - | chr4_2:58010897-58010916 | Msa0610290:intron | 25.0% |
| ! | ACAAATATTATTTGTCCAGA+TGG | - | chr4_2:58010977-58010996 | Msa0610290:intron | 25.0% |
| !! | CAAAAGCAAAAACTTGATTT+TGG | - | chr4_2:58011114-58011133 | Msa0610290:intron | 25.0% |
| !! | AACAGAAAGTAAACTTTTAG+GGG | + | chr4_2:58011317-58011336 | None:intergenic | 25.0% |
| !! | CAACAGAAAGTAAACTTTTA+GGG | + | chr4_2:58011318-58011337 | None:intergenic | 25.0% |
| !! | ACAACAGAAAGTAAACTTTT+AGG | + | chr4_2:58011319-58011338 | None:intergenic | 25.0% |
| !! | TAATTCAGTTTTCTTTTCAC+AGG | - | chr4_2:58011605-58011624 | Msa0610290:CDS | 25.0% |
| ! | TGAGGATTCATACAAAATAA+TGG | - | chr4_2:58011642-58011661 | Msa0610290:CDS | 25.0% |
| !!! | ATTAAATTGACTAGTTTGTG+GGG | - | chr4_2:58012097-58012116 | Msa0610290:intron | 25.0% |
| ! | CATGGAAATAAAAACTTGAA+AGG | - | chr4_2:58012125-58012144 | Msa0610290:intron | 25.0% |
| ! | ATTAGTTATCGTGTAATGAT+TGG | + | chr4_2:58012468-58012487 | None:intergenic | 25.0% |
| ! | AAACTCAAATGAATCTTAAC+TGG | - | chr4_2:58012600-58012619 | Msa0610290:CDS | 25.0% |
| ! | CTCTAGTATACAAAACTTAA+GGG | + | chr4_2:58012739-58012758 | None:intergenic | 25.0% |
| ! | AATAAAAGAAAAATGCGCTA+AGG | + | chr4_2:58012881-58012900 | None:intergenic | 25.0% |
| ! | TTAAAATCACAATGACTACT+TGG | - | chr4_2:58012899-58012918 | Msa0610290:intron | 25.0% |
| !! | ATAAAGATCTCCTTTGAAAA+TGG | + | chr4_2:58012953-58012972 | None:intergenic | 25.0% |
| !!! | AATTTGGTTTTAGAATCTCT+GGG | + | chr4_2:58013016-58013035 | None:intergenic | 25.0% |
| !!! | AAATTTGGTTTTAGAATCTC+TGG | + | chr4_2:58013017-58013036 | None:intergenic | 25.0% |
| !!! | GAGATTCTAAAACCAAATTT+TGG | - | chr4_2:58013017-58013036 | Msa0610290:CDS | 25.0% |
| ! | AACTCATTCTAACCAAAATT+TGG | + | chr4_2:58013032-58013051 | None:intergenic | 25.0% |
| !!! | TATATTTTGTTTGCATGGAT+AGG | - | chr4_2:58013135-58013154 | Msa0610290:five_prime_UTR | 25.0% |
| ! | AGCCAAAAAATTGTTGAAAA+AGG | + | chr4_2:58013206-58013225 | None:intergenic | 25.0% |
| !! | TTTGGTGATGATATTGAATG+AGG | - | chr4_2:58004856-58004875 | Msa0610290:three_prime_UTR | 30.0% |
| TAGAAATTGAACAAAAGAGG+GGG | + | chr4_2:58004976-58004995 | None:intergenic | 30.0% | |
| TGTTATAGAAATGACGATGA+CGG | - | chr4_2:58005175-58005194 | Msa0610290:three_prime_UTR | 30.0% | |
| CTGATCTTTGTTGAAATTAG+CGG | + | chr4_2:58005268-58005287 | None:intergenic | 30.0% | |
| ! | TTGGTGATTGTTTATTCATG+TGG | - | chr4_2:58005382-58005401 | Msa0610290:intron | 30.0% |
| ATTGTTTATTCATGTGGCTT+TGG | - | chr4_2:58005388-58005407 | Msa0610290:intron | 30.0% | |
| ! | AGGGTTTTACATAGCAATAA+TGG | - | chr4_2:58005572-58005591 | Msa0610290:intron | 30.0% |
| TAATGGTTATCGTGGAAAAT+TGG | - | chr4_2:58005589-58005608 | Msa0610290:intron | 30.0% | |
| GAAGAAGAAAAAGTCCATAT+TGG | - | chr4_2:58005759-58005778 | Msa0610290:intron | 30.0% | |
| AGAAAAAGTCCATATTGGAT+AGG | - | chr4_2:58005764-58005783 | Msa0610290:intron | 30.0% | |
| GTATCTATACCTATCCAATA+TGG | + | chr4_2:58005776-58005795 | None:intergenic | 30.0% | |
| ! | GTGTAGAAATTGGACATTTT+TGG | - | chr4_2:58005886-58005905 | Msa0610290:intron | 30.0% |
| !! | AAATTGGACATTTTTGGATC+CGG | - | chr4_2:58005892-58005911 | Msa0610290:intron | 30.0% |
| AATCTCTATGCCATATATCT+AGG | + | chr4_2:58006031-58006050 | None:intergenic | 30.0% | |
| TCACAGCAATCTAAACATAA+CGG | + | chr4_2:58006380-58006399 | None:intergenic | 30.0% | |
| TTATGTTTAGATTGCTGTGA+TGG | - | chr4_2:58006380-58006399 | Msa0610290:CDS | 30.0% | |
| AAAAGGGCAGAACAAAAAAA+TGG | + | chr4_2:58006636-58006655 | None:intergenic | 30.0% | |
| AGTACATCATTACGAGAAAA+GGG | + | chr4_2:58006652-58006671 | None:intergenic | 30.0% | |
| AAGTACATCATTACGAGAAA+AGG | + | chr4_2:58006653-58006672 | None:intergenic | 30.0% | |
| TTCTCGTAATGATGTACTTA+AGG | - | chr4_2:58006654-58006673 | Msa0610290:intron | 30.0% | |
| GCAAGAAACCTTAAAATGTT+CGG | - | chr4_2:58006939-58006958 | Msa0610290:CDS | 30.0% | |
| TGTTTAATTACACATATGCC+CGG | - | chr4_2:58006997-58007016 | Msa0610290:CDS | 30.0% | |
| GTTCATCAATTGAGAATAGA+TGG | + | chr4_2:58007032-58007051 | None:intergenic | 30.0% | |
| TATTACCTGTCTGTTTAACA+AGG | - | chr4_2:58007075-58007094 | Msa0610290:intron | 30.0% | |
| ATTACCTGTCTGTTTAACAA+GGG | - | chr4_2:58007076-58007095 | Msa0610290:intron | 30.0% | |
| !!! | TGATCTTGCCTTTTAAAACA+AGG | + | chr4_2:58007148-58007167 | None:intergenic | 30.0% |
| ! | TCATAAAGGATGTGAACTTT+TGG | - | chr4_2:58007209-58007228 | Msa0610290:intron | 30.0% |
| ! | CAATTTTCTATGCTACCAAA+TGG | - | chr4_2:58007278-58007297 | Msa0610290:intron | 30.0% |
| TTGTTCTTTATGATCTGCAA+TGG | + | chr4_2:58007334-58007353 | None:intergenic | 30.0% | |
| AAAAGAAGAGAAACAGAAGA+AGG | - | chr4_2:58007392-58007411 | Msa0610290:CDS | 30.0% | |
| AAAACCAATGAAGAAGATAC+AGG | - | chr4_2:58007447-58007466 | Msa0610290:CDS | 30.0% | |
| AATTCCTGTATCTTCTTCAT+TGG | + | chr4_2:58007454-58007473 | None:intergenic | 30.0% | |
| TACAGGAATTGAAAATGAAG+CGG | - | chr4_2:58007464-58007483 | Msa0610290:CDS | 30.0% | |
| ! | GTCAAGTTGTGCAATTAAAA+TGG | + | chr4_2:58007588-58007607 | None:intergenic | 30.0% |
| ! | TTTTGAACGCATTAACAATC+TGG | - | chr4_2:58007650-58007669 | Msa0610290:intron | 30.0% |
| ! | CTTCAAAATTAGTGTTGTTG+AGG | - | chr4_2:58008144-58008163 | Msa0610290:intron | 30.0% |
| ! | TTCTTTTGCATTCTACATTC+AGG | + | chr4_2:58008234-58008253 | None:intergenic | 30.0% |
| !! | CATAAAACTGACTTTTCTTG+GGG | + | chr4_2:58008507-58008526 | None:intergenic | 30.0% |
| !! | GTCATAAAACTGACTTTTCT+TGG | + | chr4_2:58008509-58008528 | None:intergenic | 30.0% |
| TATTCTGCAATCATTTATGG+AGG | + | chr4_2:58008680-58008699 | None:intergenic | 30.0% | |
| TGATTGCAGAATATTTCTTG+TGG | - | chr4_2:58008687-58008706 | Msa0610290:intron | 30.0% | |
| ATCCAAATCTGAGAAATCAA+AGG | + | chr4_2:58008728-58008747 | None:intergenic | 30.0% | |
| ATTTCTCAGATTTGGATGAA+AGG | - | chr4_2:58008731-58008750 | Msa0610290:intron | 30.0% | |
| !!! | GGCTTTAAACTCTTTTTTAC+TGG | - | chr4_2:58008946-58008965 | Msa0610290:intron | 30.0% |
| GTAGGTGTAATGTATATAAC+AGG | + | chr4_2:58009131-58009150 | None:intergenic | 30.0% | |
| ! | TTTGAGGATATCTTTGTTGT+AGG | + | chr4_2:58009149-58009168 | None:intergenic | 30.0% |
| ! | ACAATGGTAATTTTCCATGA+AGG | + | chr4_2:58009221-58009240 | None:intergenic | 30.0% |
| ATTTAGAAATATACCCTCCT+AGG | - | chr4_2:58009297-58009316 | Msa0610290:intron | 30.0% | |
| TAATGTGTCTATTGTAGAAG+GGG | + | chr4_2:58009327-58009346 | None:intergenic | 30.0% | |
| GTAATGTGTCTATTGTAGAA+GGG | + | chr4_2:58009328-58009347 | None:intergenic | 30.0% | |
| AGTAATGTGTCTATTGTAGA+AGG | + | chr4_2:58009329-58009348 | None:intergenic | 30.0% | |
| TAGTAGTTAGAGAAGTTAGT+TGG | + | chr4_2:58009451-58009470 | None:intergenic | 30.0% | |
| !! | GTTTGTTATGATATGGGATA+AGG | + | chr4_2:58009503-58009522 | None:intergenic | 30.0% |
| !! | TGAGGAGTTTGTTATGATAT+GGG | + | chr4_2:58009509-58009528 | None:intergenic | 30.0% |
| !! | ATGAGGAGTTTGTTATGATA+TGG | + | chr4_2:58009510-58009529 | None:intergenic | 30.0% |
| CAAACATTGATAGGATAATG+AGG | + | chr4_2:58009527-58009546 | None:intergenic | 30.0% | |
| ! | GTATGACCTTTATTTGTGAT+TGG | + | chr4_2:58009627-58009646 | None:intergenic | 30.0% |
| !!! | TGTTTTTGTTTTAGCTCTGT+TGG | + | chr4_2:58009672-58009691 | None:intergenic | 30.0% |
| !!! | GAGCACTACAACTTTTTTAA+TGG | + | chr4_2:58009808-58009827 | None:intergenic | 30.0% |
| ! | AGACTATTTCCCTATTTTGT+TGG | + | chr4_2:58009930-58009949 | None:intergenic | 30.0% |
| ATCCCTGAATTCAATTTGAT+AGG | + | chr4_2:58010115-58010134 | None:intergenic | 30.0% | |
| ATCAAATTGAATTCAGGGAT+AGG | - | chr4_2:58010115-58010134 | Msa0610290:intron | 30.0% | |
| ATAAGGTTTATGTACAGAAG+AGG | + | chr4_2:58010184-58010203 | None:intergenic | 30.0% | |
| AGCAATCTATCAGTTCATAT+AGG | + | chr4_2:58010335-58010354 | None:intergenic | 30.0% | |
| AAAACATCAATGAAAAGTGG+GGG | + | chr4_2:58010404-58010423 | None:intergenic | 30.0% | |
| GTGGGTATATACATATCTTT+AGG | - | chr4_2:58010437-58010456 | Msa0610290:intron | 30.0% | |
| GGGTATATACATATCTTTAG+GGG | - | chr4_2:58010439-58010458 | Msa0610290:intron | 30.0% | |
| TATATCTTCGTCATATTTGC+CGG | + | chr4_2:58010664-58010683 | None:intergenic | 30.0% | |
| AAACGATGAAGAATTTCAAG+AGG | - | chr4_2:58010683-58010702 | Msa0610290:CDS | 30.0% | |
| TTCAAATGTTTATCAAAGGG+TGG | - | chr4_2:58010786-58010805 | Msa0610290:intron | 30.0% | |
| TATCAAAGGGTGGTATATAA+TGG | - | chr4_2:58010796-58010815 | Msa0610290:intron | 30.0% | |
| ATAACTTACACCTTTCTCTT+TGG | - | chr4_2:58011002-58011021 | Msa0610290:intron | 30.0% | |
| !! | AGACTGTATTTTAGACAACT+TGG | + | chr4_2:58011076-58011095 | None:intergenic | 30.0% |
| AAGTAAAACTTCAATGCTAC+AGG | - | chr4_2:58011218-58011237 | Msa0610290:intron | 30.0% | |
| AATGAATAAAACTCCTTTGC+TGG | + | chr4_2:58011245-58011264 | None:intergenic | 30.0% | |
| !!! | ACTTTCTGGGATGAAAATTT+TGG | - | chr4_2:58011390-58011409 | Msa0610290:intron | 30.0% |
| !!! | ATGCTTGAGTTTTTTTGAAC+CGG | + | chr4_2:58011537-58011556 | None:intergenic | 30.0% |
| AAAAAAACTCAAGCATCAGT+TGG | - | chr4_2:58011541-58011560 | Msa0610290:CDS | 30.0% | |
| CCTCTCAAAACTGAAATAAA+TGG | + | chr4_2:58011750-58011769 | None:intergenic | 30.0% | |
| !!! | CCATTTATTTCAGTTTTGAG+AGG | - | chr4_2:58011747-58011766 | Msa0610290:intron | 30.0% |
| ! | TATACTCAACTGTTACTTAC+AGG | - | chr4_2:58011835-58011854 | Msa0610290:intron | 30.0% |
| ! | AGAGTTAAGAGCGTATTAAT+AGG | - | chr4_2:58011950-58011969 | Msa0610290:intron | 30.0% |
| ATAGGTATAATAGCTCATCT+TGG | - | chr4_2:58011968-58011987 | Msa0610290:intron | 30.0% | |
| TAGGTATAATAGCTCATCTT+GGG | - | chr4_2:58011969-58011988 | Msa0610290:intron | 30.0% | |
| TACTTTCAGTGAGTTATACT+TGG | - | chr4_2:58012001-58012020 | Msa0610290:intron | 30.0% | |
| GGAAATAAAAACTTGAAAGG+TGG | - | chr4_2:58012128-58012147 | Msa0610290:intron | 30.0% | |
| TAAAAACTTGAAAGGTGGTT+TGG | - | chr4_2:58012133-58012152 | Msa0610290:intron | 30.0% | |
| !!! | TTAATGGCTTGTTTTTGAAC+AGG | - | chr4_2:58012204-58012223 | Msa0610290:intron | 30.0% |
| AAATGAAGACAAGTGGTAAA+AGG | + | chr4_2:58012321-58012340 | None:intergenic | 30.0% | |
| TTTACCACTTGTCTTCATTT+AGG | - | chr4_2:58012321-58012340 | Msa0610290:intron | 30.0% | |
| ATATTGTCCTTACCTCAATA+TGG | - | chr4_2:58012486-58012505 | Msa0610290:intron | 30.0% | |
| ATAAATGCCATATTGAGGTA+AGG | + | chr4_2:58012496-58012515 | None:intergenic | 30.0% | |
| TCACTATAAATGCCATATTG+AGG | + | chr4_2:58012501-58012520 | None:intergenic | 30.0% | |
| ATCTTAACTGGTAAGTTTAC+TGG | - | chr4_2:58012612-58012631 | Msa0610290:CDS | 30.0% | |
| GCTCTAGTATACAAAACTTA+AGG | + | chr4_2:58012740-58012759 | None:intergenic | 30.0% | |
| TGACAAAACTGGTACGAATT+TGG | - | chr4_2:58004838-58004857 | Msa0610290:three_prime_UTR | 35.0% | |
| AGAAATTGAACAAAAGAGGG+GGG | + | chr4_2:58004975-58004994 | None:intergenic | 35.0% | |
| GTTTGGATGAAGAAGAGAAT+GGG | + | chr4_2:58005076-58005095 | None:intergenic | 35.0% | |
| TAAAAGAGAGAATGGAAACC+AGG | + | chr4_2:58005333-58005352 | None:intergenic | 35.0% | |
| ! | ACATTTTACTGTCGTAATGC+TGG | - | chr4_2:58005442-58005461 | Msa0610290:exon | 35.0% |
| ! | CATTTTACTGTCGTAATGCT+GGG | - | chr4_2:58005443-58005462 | Msa0610290:exon | 35.0% |
| ! | TAGACTTTACTGCTTTAGAC+AGG | - | chr4_2:58005552-58005571 | Msa0610290:intron | 35.0% |
| ! | AGACTTTACTGCTTTAGACA+GGG | - | chr4_2:58005553-58005572 | Msa0610290:intron | 35.0% |
| CATAGCAATAATGGTTATCG+TGG | - | chr4_2:58005581-58005600 | Msa0610290:intron | 35.0% | |
| ! | TTTAGGTTCGTCACTAAAGT+CGG | + | chr4_2:58005711-58005730 | None:intergenic | 35.0% |
| TTAGTGACGAACCTAAAACT+AGG | - | chr4_2:58005714-58005733 | Msa0610290:intron | 35.0% | |
| TAGTGACGAACCTAAAACTA+GGG | - | chr4_2:58005715-58005734 | Msa0610290:intron | 35.0% | |
| ACATGCTGCTAAAACAATCT+CGG | + | chr4_2:58006098-58006117 | None:intergenic | 35.0% | |
| CAAGCACCTTATGTTGTTAT+CGG | - | chr4_2:58006171-58006190 | Msa0610290:intron | 35.0% | |
| TAAGCAGATGAACAGTGTAA+GGG | + | chr4_2:58006198-58006217 | None:intergenic | 35.0% | |
| TTAAGCAGATGAACAGTGTA+AGG | + | chr4_2:58006199-58006218 | None:intergenic | 35.0% | |
| AGCAGTTAATTGGGTATCAA+TGG | + | chr4_2:58006286-58006305 | None:intergenic | 35.0% | |
| GATGGAAGTGATGAATATGA+TGG | - | chr4_2:58006398-58006417 | Msa0610290:CDS | 35.0% | |
| AAAGATTGCCACATATCAAG+AGG | - | chr4_2:58006484-58006503 | Msa0610290:intron | 35.0% | |
| AAGATTGCCACATATCAAGA+GGG | - | chr4_2:58006485-58006504 | Msa0610290:intron | 35.0% | |
| GAAATCTGATTAGGAAAGCA+GGG | - | chr4_2:58006859-58006878 | Msa0610290:intron | 35.0% | |
| GATACAGCAATTGTTGTGTT+TGG | - | chr4_2:58006881-58006900 | Msa0610290:intron | 35.0% | |
| ! | TTGGTTTGAAGTGCTAGATT+AGG | - | chr4_2:58006900-58006919 | Msa0610290:intron | 35.0% |
| ! | ATGCTCTTCCGAACATTTTA+AGG | + | chr4_2:58006950-58006969 | None:intergenic | 35.0% |
| AATTGAGAATAGATGGGTGT+GGG | + | chr4_2:58007025-58007044 | None:intergenic | 35.0% | |
| GTTAAACAGACAGGTAATAG+TGG | + | chr4_2:58007074-58007093 | None:intergenic | 35.0% | |
| TTACCTGTCTGTTTAACAAG+GGG | - | chr4_2:58007077-58007096 | Msa0610290:intron | 35.0% | |
| GCGTGAAATCTGTAATTTCA+CGG | + | chr4_2:58007185-58007204 | None:intergenic | 35.0% | |
| GATTTCACGCTATGTCATAA+AGG | - | chr4_2:58007195-58007214 | Msa0610290:intron | 35.0% | |
| !! | AAGGATGTGAACTTTTGGTT+TGG | - | chr4_2:58007214-58007233 | Msa0610290:intron | 35.0% |
| !!! | AGGATGTGAACTTTTGGTTT+GGG | - | chr4_2:58007215-58007234 | Msa0610290:intron | 35.0% |
| !!! | ACTTTTGGTTTGGGTGATAA+AGG | - | chr4_2:58007224-58007243 | Msa0610290:intron | 35.0% |
| TAGGAGGATGATAAAAGATC+AGG | + | chr4_2:58007724-58007743 | None:intergenic | 35.0% | |
| ! | TGATCTTTTATCATCCTCCT+AGG | - | chr4_2:58007723-58007742 | Msa0610290:intron | 35.0% |
| ACTTTCTTATAGGATGAAGC+TGG | - | chr4_2:58008002-58008021 | Msa0610290:intron | 35.0% | |
| CTTTCTTATAGGATGAAGCT+GGG | - | chr4_2:58008003-58008022 | Msa0610290:intron | 35.0% | |
| TTTCTTATAGGATGAAGCTG+GGG | - | chr4_2:58008004-58008023 | Msa0610290:intron | 35.0% | |
| ! | AGGATCCTTGTTTGATAAAG+TGG | - | chr4_2:58008082-58008101 | Msa0610290:intron | 35.0% |
| CTCTTCCACTTTATCAAACA+AGG | + | chr4_2:58008090-58008109 | None:intergenic | 35.0% | |
| CTTGTTTGATAAAGTGGAAG+AGG | - | chr4_2:58008088-58008107 | Msa0610290:intron | 35.0% | |
| ! | CAAAATTAGTGTTGTTGAGG+TGG | - | chr4_2:58008147-58008166 | Msa0610290:intron | 35.0% |
| ATCAGTTTCAGATTCAACAG+TGG | + | chr4_2:58008270-58008289 | None:intergenic | 35.0% | |
| !! | TCTGAAACTGATTTGACAAC+TGG | - | chr4_2:58008278-58008297 | Msa0610290:intron | 35.0% |
| !! | AACTGATTTGACAACTGGAA+AGG | - | chr4_2:58008283-58008302 | Msa0610290:intron | 35.0% |
| TTCTGATGAAGCCATCAATA+CGG | - | chr4_2:58008313-58008332 | Msa0610290:intron | 35.0% | |
| ATTAGGTCATAATGAGGTAC+CGG | - | chr4_2:58008445-58008464 | Msa0610290:intron | 35.0% | |
| ACAAAAATAGAAGAGCCTAC+CGG | + | chr4_2:58008467-58008486 | None:intergenic | 35.0% | |
| ! | TGCCTTTGATTTCTCAGATT+TGG | - | chr4_2:58008723-58008742 | Msa0610290:intron | 35.0% |
| ATTTGGATGAAAGGAAACAC+TGG | - | chr4_2:58008740-58008759 | Msa0610290:intron | 35.0% | |
| TTTGGATGAAAGGAAACACT+GGG | - | chr4_2:58008741-58008760 | Msa0610290:intron | 35.0% | |
| ATCTAACTTTGTCATGTCAG+AGG | + | chr4_2:58008845-58008864 | None:intergenic | 35.0% | |
| !!! | GGCTAAACTGCATTTTTTGA+AGG | - | chr4_2:58009016-58009035 | Msa0610290:intron | 35.0% |
| GAATTATCAGTCTTCCTTCA+TGG | - | chr4_2:58009204-58009223 | Msa0610290:intron | 35.0% | |
| ATTACCATTGTGAGTGTGTT+AGG | - | chr4_2:58009230-58009249 | Msa0610290:intron | 35.0% | |
| GAGAATACATGAATAGAGGA+GGG | + | chr4_2:58009385-58009404 | None:intergenic | 35.0% | |
| CTAGGAGAATACATGAATAG+AGG | + | chr4_2:58009389-58009408 | None:intergenic | 35.0% | |
| GGAGCAGTTAGTAACAATAT+AGG | + | chr4_2:58009482-58009501 | None:intergenic | 35.0% | |
| CAAAATAGGGAAATAGTCTC+AGG | - | chr4_2:58009931-58009950 | Msa0610290:intron | 35.0% | |
| GTCTATCAGGTTTCAGATTA+GGG | - | chr4_2:58009953-58009972 | Msa0610290:CDS | 35.0% | |
| GAGATACTCCAACATTTGTT+TGG | + | chr4_2:58010050-58010069 | None:intergenic | 35.0% | |
| ! | AACAAATGTTGGAGTATCTC+TGG | - | chr4_2:58010050-58010069 | Msa0610290:intron | 35.0% |
| TCAATTTGATAGGATTGGGT+GGG | + | chr4_2:58010105-58010124 | None:intergenic | 35.0% | |
| TTCAATTTGATAGGATTGGG+TGG | + | chr4_2:58010106-58010125 | None:intergenic | 35.0% | |
| TACTTATATTCGAGACTGCA+AGG | + | chr4_2:58010210-58010229 | None:intergenic | 35.0% | |
| AAATCAAACTTTGTGCCTTG+TGG | - | chr4_2:58010259-58010278 | Msa0610290:intron | 35.0% | |
| AAGTGAATATGAGTTCCACA+AGG | + | chr4_2:58010277-58010296 | None:intergenic | 35.0% | |
| !! | GAATACTGATGGATTGTCAA+AGG | - | chr4_2:58010476-58010495 | Msa0610290:intron | 35.0% |
| GGATTGTCAAAGGAAGAATT+AGG | - | chr4_2:58010486-58010505 | Msa0610290:intron | 35.0% | |
| TTCATTGTCTAATGCAGTGT+TGG | + | chr4_2:58010568-58010587 | None:intergenic | 35.0% | |
| TGCATTAGACAATGAAGATC+AGG | - | chr4_2:58010572-58010591 | Msa0610290:CDS | 35.0% | |
| GATCAGGAAGATATTCTACA+CGG | - | chr4_2:58010588-58010607 | Msa0610290:CDS | 35.0% | |
| ATCAGGAAGATATTCTACAC+GGG | - | chr4_2:58010589-58010608 | Msa0610290:CDS | 35.0% | |
| CAGATTTGTATGAGGAACTA+AGG | + | chr4_2:58010722-58010741 | None:intergenic | 35.0% | |
| TATAACAAACCTGACAAGTC+TGG | + | chr4_2:58010759-58010778 | None:intergenic | 35.0% | |
| ! | GTATTTTCTCTAACCACGAA+GGG | + | chr4_2:58010873-58010892 | None:intergenic | 35.0% |
| ! | TGTATTTTCTCTAACCACGA+AGG | + | chr4_2:58010874-58010893 | None:intergenic | 35.0% |
| AGGTGTAAGTTATATCCATC+TGG | + | chr4_2:58010995-58011014 | None:intergenic | 35.0% | |
| TCTAAAGAAGCCAAAGAGAA+AGG | + | chr4_2:58011015-58011034 | None:intergenic | 35.0% | |
| !! | CAAGTTTTTGCTTTTGTGTC+AGG | + | chr4_2:58011110-58011129 | None:intergenic | 35.0% |
| !!! | GATTTTGGTTAGTATCATGC+TGG | - | chr4_2:58011129-58011148 | Msa0610290:intron | 35.0% |
| ! | CACAATACAAATGCTTTGAG+TGG | + | chr4_2:58011164-58011183 | None:intergenic | 35.0% |
| ! | CACTCAAAGCATTTGTATTG+TGG | - | chr4_2:58011162-58011181 | Msa0610290:intron | 35.0% |
| ! | TCAAAGCATTTGTATTGTGG+AGG | - | chr4_2:58011165-58011184 | Msa0610290:intron | 35.0% |
| !!! | TGGGATGAAAATTTTGGTTC+AGG | - | chr4_2:58011396-58011415 | Msa0610290:intron | 35.0% |
| TTAATCAGACTGTGTTTCTC+CGG | - | chr4_2:58011515-58011534 | Msa0610290:CDS | 35.0% | |
| TTTCTAATGGTGATCATTGC+TGG | - | chr4_2:58011668-58011687 | Msa0610290:intron | 35.0% | |
| TTCATTTGGATCACAAGTGT+TGG | - | chr4_2:58011893-58011912 | Msa0610290:intron | 35.0% | |
| !! | TTGGTGACTTTTGCAACATT+GGG | - | chr4_2:58012020-58012039 | Msa0610290:intron | 35.0% |
| !! | AGTGGACTGTCTGTAATTAA+TGG | - | chr4_2:58012188-58012207 | Msa0610290:intron | 35.0% |
| TTGACCTAAATGAAGACAAG+TGG | + | chr4_2:58012328-58012347 | None:intergenic | 35.0% | |
| TATGGCATTTATAGTGACTG+TGG | - | chr4_2:58012504-58012523 | Msa0610290:intron | 35.0% | |
| ! | TGAGTTTTCACAACTCATCA+CGG | + | chr4_2:58012587-58012606 | None:intergenic | 35.0% |
| ! | GCATTGTGATTCCTTTTCTT+TGG | - | chr4_2:58012634-58012653 | Msa0610290:intron | 35.0% |
| GACTCAAATCTCCAAAGAAA+AGG | + | chr4_2:58012648-58012667 | None:intergenic | 35.0% | |
| ! | TTTCTTTGGAGATTTGAGTC+CGG | - | chr4_2:58012648-58012667 | Msa0610290:intron | 35.0% |
| ! | GCAAAAAAGTTGATCATCTC+CGG | + | chr4_2:58012670-58012689 | None:intergenic | 35.0% |
| AACAGCTAGTATGAAGATCA+TGG | - | chr4_2:58012694-58012713 | Msa0610290:intron | 35.0% | |
| TACTAGAGCTTACCCAAATT+TGG | - | chr4_2:58012751-58012770 | Msa0610290:CDS | 35.0% | |
| AGCTTACCCAAATTTGGTAT+TGG | - | chr4_2:58012757-58012776 | Msa0610290:CDS | 35.0% | |
| ! | ATCTCCTTTGAAAATGGAAC+GGG | + | chr4_2:58012947-58012966 | None:intergenic | 35.0% |
| ! | GATCTCCTTTGAAAATGGAA+CGG | + | chr4_2:58012948-58012967 | None:intergenic | 35.0% |
| ACACGATGCAAAATACTAGA+CGG | - | chr4_2:58012990-58013009 | Msa0610290:CDS | 35.0% | |
| !! | TTTTGTTTGCATGGATAGGA+AGG | - | chr4_2:58013139-58013158 | Msa0610290:five_prime_UTR | 35.0% |
| GGTTTGGATGAAGAAGAGAA+TGG | + | chr4_2:58005077-58005096 | None:intergenic | 40.0% | |
| TAACAGTGAGATGAACCTTG+GGG | + | chr4_2:58005125-58005144 | None:intergenic | 40.0% | |
| GTAACAGTGAGATGAACCTT+GGG | + | chr4_2:58005126-58005145 | None:intergenic | 40.0% | |
| AGAATGGAAACCAGGTTCAT+CGG | + | chr4_2:58005325-58005344 | None:intergenic | 40.0% | |
| CTTTGGTATTGCAGGTACAT+CGG | - | chr4_2:58005405-58005424 | Msa0610290:intron | 40.0% | |
| ! | TTTTCGTCTCGAGTCAATGA+TGG | - | chr4_2:58005484-58005503 | Msa0610290:CDS | 40.0% |
| ! | CGAGTCAATGATGGAATTTG+CGG | - | chr4_2:58005493-58005512 | Msa0610290:CDS | 40.0% |
| AATGTGTGTGACCTCAATTG+CGG | - | chr4_2:58005617-58005636 | Msa0610290:CDS | 40.0% | |
| AGTTGTCAAAACCGCAATTG+AGG | + | chr4_2:58005631-58005650 | None:intergenic | 40.0% | |
| ATATCACACTGCACAGATTG+TGG | - | chr4_2:58005663-58005682 | Msa0610290:intron | 40.0% | |
| TTAGGTTCGTCACTAAAGTC+GGG | + | chr4_2:58005710-58005729 | None:intergenic | 40.0% | |
| GAACCTAAAACTAGGGACAA+GGG | - | chr4_2:58005722-58005741 | Msa0610290:intron | 40.0% | |
| !! | TTTCCCTTGTCCCTAGTTTT+AGG | + | chr4_2:58005728-58005747 | None:intergenic | 40.0% |
| GGATAGGTATAGATACGCAT+AGG | - | chr4_2:58005780-58005799 | Msa0610290:CDS | 40.0% | |
| AAGGGACCGATAACAACATA+AGG | + | chr4_2:58006180-58006199 | None:intergenic | 40.0% | |
| CTACAGGCTAGCAGTTAATT+GGG | + | chr4_2:58006295-58006314 | None:intergenic | 40.0% | |
| ACTACAGGCTAGCAGTTAAT+TGG | + | chr4_2:58006296-58006315 | None:intergenic | 40.0% | |
| CTAGAAACTGCACAAACTAC+AGG | + | chr4_2:58006311-58006330 | None:intergenic | 40.0% | |
| AGCAATCTAAACATAACGGC+AGG | + | chr4_2:58006376-58006395 | None:intergenic | 40.0% | |
| ! | AAAGTGCCCAAATACATGCT+GGG | - | chr4_2:58006427-58006446 | Msa0610290:intron | 40.0% |
| AGCAATTGAACACGCACATT+TGG | - | chr4_2:58006526-58006545 | Msa0610290:intron | 40.0% | |
| GGGGTTGTGAAACAGTTAAA+AGG | - | chr4_2:58006608-58006627 | Msa0610290:CDS | 40.0% | |
| GGAAATCTGATTAGGAAAGC+AGG | - | chr4_2:58006858-58006877 | Msa0610290:intron | 40.0% | |
| CAATTGAGAATAGATGGGTG+TGG | + | chr4_2:58007026-58007045 | None:intergenic | 40.0% | |
| AGAACAAATAGACAAGGCTG+AGG | - | chr4_2:58007347-58007366 | Msa0610290:CDS | 40.0% | |
| AATAGACAAGGCTGAGGAAA+AGG | - | chr4_2:58007353-58007372 | Msa0610290:CDS | 40.0% | |
| AGAAGAGAAACAGAAGAAGG+AGG | - | chr4_2:58007395-58007414 | Msa0610290:CDS | 40.0% | |
| AGACATCAAAGACAATTCCG+CGG | - | chr4_2:58007497-58007516 | Msa0610290:CDS | 40.0% | |
| TTTCTCATGAATACTTGCCG+CGG | + | chr4_2:58007517-58007536 | None:intergenic | 40.0% | |
| TACAATCGAACCTGATCAAC+CGG | + | chr4_2:58007561-58007580 | None:intergenic | 40.0% | |
| ! | CGCATTAACAATCTGGAATC+TGG | - | chr4_2:58007657-58007676 | Msa0610290:intron | 40.0% |
| GGCATTCAGCTAATATGAAG+TGG | - | chr4_2:58007678-58007697 | Msa0610290:intron | 40.0% | |
| TTATCATCCTCCTAGGAGTT+AGG | - | chr4_2:58007730-58007749 | Msa0610290:intron | 40.0% | |
| TAGTAAACCTCCTAACTCCT+AGG | + | chr4_2:58007743-58007762 | None:intergenic | 40.0% | |
| AGAGAAATAATATGCCCCAG+TGG | + | chr4_2:58007887-58007906 | None:intergenic | 40.0% | |
| TGTTTCACTACTCCATCATG+TGG | - | chr4_2:58007946-58007965 | Msa0610290:intron | 40.0% | |
| TTAAACCACTGACCACATGA+TGG | + | chr4_2:58007961-58007980 | None:intergenic | 40.0% | |
| TCCTTCACTTTCAGAATCAG+TGG | + | chr4_2:58008066-58008085 | None:intergenic | 40.0% | |
| ATCTAATGAACACACATGGC+AGG | + | chr4_2:58008178-58008197 | None:intergenic | 40.0% | |
| AGAATGCAAAAGAAGCTGAG+AGG | - | chr4_2:58008240-58008259 | Msa0610290:intron | 40.0% | |
| GAATGCAAAAGAAGCTGAGA+GGG | - | chr4_2:58008241-58008260 | Msa0610290:intron | 40.0% | |
| TTCGTTATGAGACCATTCAC+TGG | + | chr4_2:58008579-58008598 | None:intergenic | 40.0% | |
| TTGGATGAAAGGAAACACTG+GGG | - | chr4_2:58008742-58008761 | Msa0610290:intron | 40.0% | |
| TTGAAACAATACCTCCCTTG+TGG | - | chr4_2:58008809-58008828 | Msa0610290:intron | 40.0% | |
| ! | TTTTGTCGTCGTACAAAGTC+AGG | + | chr4_2:58009096-58009115 | None:intergenic | 40.0% |
| ATTGTAGAAGGGGAAATCCT+AGG | + | chr4_2:58009317-58009336 | None:intergenic | 40.0% | |
| GGAGAATACATGAATAGAGG+AGG | + | chr4_2:58009386-58009405 | None:intergenic | 40.0% | |
| TGGCTGGGAGCAAATTAATA+GGG | + | chr4_2:58009652-58009671 | None:intergenic | 40.0% | |
| TTGGCTGGGAGCAAATTAAT+AGG | + | chr4_2:58009653-58009672 | None:intergenic | 40.0% | |
| !!! | TTGTTTTAGCTCTGTTGGCT+GGG | + | chr4_2:58009667-58009686 | None:intergenic | 40.0% |
| !!! | TTTGTTTTAGCTCTGTTGGC+TGG | + | chr4_2:58009668-58009687 | None:intergenic | 40.0% |
| AACACAACAAGAGAGTCAGT+CGG | - | chr4_2:58009709-58009728 | Msa0610290:intron | 40.0% | |
| GTGGTGCAAGTAAAAAAGCT+CGG | + | chr4_2:58009860-58009879 | None:intergenic | 40.0% | |
| AGGTCTCACACCAACAAAAT+AGG | - | chr4_2:58009917-58009936 | Msa0610290:intron | 40.0% | |
| GGTCTCACACCAACAAAATA+GGG | - | chr4_2:58009918-58009937 | Msa0610290:intron | 40.0% | |
| GAAATAGTCTCAGGTCTATC+AGG | - | chr4_2:58009940-58009959 | Msa0610290:intron | 40.0% | |
| GGTCTATCAGGTTTCAGATT+AGG | - | chr4_2:58009952-58009971 | Msa0610290:CDS | 40.0% | |
| !! | ATTGATAATGTGCTAGGGCT+AGG | - | chr4_2:58009982-58010001 | Msa0610290:CDS | 40.0% |
| AATGGGGACCAAACAAATGT+TGG | - | chr4_2:58010039-58010058 | Msa0610290:intron | 40.0% | |
| TTCAGGGATAGGAACAATCA+TGG | - | chr4_2:58010126-58010145 | Msa0610290:intron | 40.0% | |
| GAAATATTTCCCTTGTGAGC+AGG | + | chr4_2:58010309-58010328 | None:intergenic | 40.0% | |
| ! | GAAGCATCTGAGAATACTGA+TGG | - | chr4_2:58010465-58010484 | Msa0610290:intron | 40.0% |
| TGTCAAAGGAAGAATTAGGC+AGG | - | chr4_2:58010490-58010509 | Msa0610290:CDS | 40.0% | |
| CTCAACGTCAGATTTGTATG+AGG | + | chr4_2:58010730-58010749 | None:intergenic | 40.0% | |
| ! | GGGTGTCTGGAATATATTGA+CGG | + | chr4_2:58010923-58010942 | None:intergenic | 40.0% |
| ! | ATGTCTACCTGACTGATTCA+CGG | + | chr4_2:58010944-58010963 | None:intergenic | 40.0% |
| GTATTGTGGAGGTTTAGTTG+TGG | - | chr4_2:58011176-58011195 | Msa0610290:intron | 40.0% | |
| TGGAGGTTTAGTTGTGGAAT+TGG | - | chr4_2:58011182-58011201 | Msa0610290:intron | 40.0% | |
| AGAAAGTGAGATGACGAGAT+AGG | + | chr4_2:58011377-58011396 | None:intergenic | 40.0% | |
| TATCTCGTCATCTCACTTTC+TGG | - | chr4_2:58011376-58011395 | Msa0610290:intron | 40.0% | |
| ATCTCGTCATCTCACTTTCT+GGG | - | chr4_2:58011377-58011396 | Msa0610290:intron | 40.0% | |
| TACCAAAACCTTACCCCAAA+CGG | + | chr4_2:58011481-58011500 | None:intergenic | 40.0% | |
| AATGGTGATCATTGCTGGAA+CGG | - | chr4_2:58011673-58011692 | Msa0610290:intron | 40.0% | |
| CATACCTTCAAACTCCTATC+AGG | + | chr4_2:58011700-58011719 | None:intergenic | 40.0% | |
| !! | CTTGGTGACTTTTGCAACAT+TGG | - | chr4_2:58012019-58012038 | Msa0610290:intron | 40.0% |
| ! | TGAAAGGTGGTTTGGATTTG+TGG | - | chr4_2:58012141-58012160 | Msa0610290:intron | 40.0% |
| GAACAGGTCAAGCTAAAATG+CGG | - | chr4_2:58012220-58012239 | Msa0610290:intron | 40.0% | |
| AACAGGTCAAGCTAAAATGC+GGG | - | chr4_2:58012221-58012240 | Msa0610290:intron | 40.0% | |
| ATAACAATCCCTACTCGCAA+CGG | + | chr4_2:58012282-58012301 | None:intergenic | 40.0% | |
| ! | TTTTCCTGATTGCTGTCTCA+TGG | - | chr4_2:58012369-58012388 | Msa0610290:intron | 40.0% |
| TTTCCTGATTGCTGTCTCAT+GGG | - | chr4_2:58012370-58012389 | Msa0610290:intron | 40.0% | |
| ! | CAGCTTTTCTTCCTGACAAA+GGG | + | chr4_2:58012433-58012452 | None:intergenic | 40.0% |
| ! | TCAGCTTTTCTTCCTGACAA+AGG | + | chr4_2:58012434-58012453 | None:intergenic | 40.0% |
| TTGTCAGGAAGAAAAGCTGA+AGG | - | chr4_2:58012434-58012453 | Msa0610290:intron | 40.0% | |
| TAGTGACTGTGGAATGTAAC+AGG | - | chr4_2:58012515-58012534 | Msa0610290:intron | 40.0% | |
| CAAGCTAGACCTACTGAATT+CGG | - | chr4_2:58012548-58012567 | Msa0610290:CDS | 40.0% | |
| !! | TACCCAAATTTGGTATTGGC+TGG | - | chr4_2:58012761-58012780 | Msa0610290:CDS | 40.0% |
| !! | ACCCAAATTTGGTATTGGCT+GGG | - | chr4_2:58012762-58012781 | Msa0610290:CDS | 40.0% |
| TCCTTATGTCTCATCTGGTT+TGG | - | chr4_2:58012833-58012852 | Msa0610290:intron | 40.0% | |
| ! | ATTGCCCGTTCCATTTTCAA+AGG | - | chr4_2:58012940-58012959 | Msa0610290:CDS | 40.0% |
| CACACTAGAACGGTATAAGA+TGG | + | chr4_2:58013100-58013119 | None:intergenic | 40.0% | |
| GTCTAGGAATCACACTAGAA+CGG | + | chr4_2:58013110-58013129 | None:intergenic | 40.0% | |
| CGATACGCTAGTGTCCATAA+CGG | - | chr4_2:58004927-58004946 | Msa0610290:three_prime_UTR | 45.0% | |
| GATACGCTAGTGTCCATAAC+GGG | - | chr4_2:58004928-58004947 | Msa0610290:three_prime_UTR | 45.0% | |
| AAACCCAAAGACCCATTCCT+CGG | - | chr4_2:58005092-58005111 | Msa0610290:three_prime_UTR | 45.0% | |
| ATTCCGAGGAATGGGTCTTT+GGG | + | chr4_2:58005098-58005117 | None:intergenic | 45.0% | |
| GGTAACAGTGAGATGAACCT+TGG | + | chr4_2:58005127-58005146 | None:intergenic | 45.0% | |
| !! | TCATGTGGCTTTGGTATTGC+AGG | - | chr4_2:58005397-58005416 | Msa0610290:intron | 45.0% |
| CGACAGTAAAATGTTCCACG+CGG | + | chr4_2:58005436-58005455 | None:intergenic | 45.0% | |
| AGACGAAAACAGAGACACAG+GGG | + | chr4_2:58005473-58005492 | None:intergenic | 45.0% | |
| GAGACGAAAACAGAGACACA+GGG | + | chr4_2:58005474-58005493 | None:intergenic | 45.0% | |
| CACTGCACAGATTGTGGTTA+TGG | - | chr4_2:58005669-58005688 | Msa0610290:intron | 45.0% | |
| CGAACCTAAAACTAGGGACA+AGG | - | chr4_2:58005721-58005740 | Msa0610290:intron | 45.0% | |
| ! | CAAAGTGCCCAAATACATGC+TGG | - | chr4_2:58006426-58006445 | Msa0610290:intron | 45.0% |
| TTTGACGCCCTCTTGATATG+TGG | + | chr4_2:58006495-58006514 | None:intergenic | 45.0% | |
| GCTAGATTAGGCGTCTTCTT+TGG | - | chr4_2:58006912-58006931 | Msa0610290:intron | 45.0% | |
| TCTCCCCTTGTTAAACAGAC+AGG | + | chr4_2:58007083-58007102 | None:intergenic | 45.0% | |
| TGTCTGTTTAACAAGGGGAG+AGG | - | chr4_2:58007082-58007101 | Msa0610290:intron | 45.0% | |
| !! | GGAAAAGGAGCGTTTACAGA+AGG | - | chr4_2:58007368-58007387 | Msa0610290:CDS | 45.0% |
| TGAAGTTAAAGAGGGCTCTC+CGG | - | chr4_2:58007539-58007558 | Msa0610290:CDS | 45.0% | |
| TAAACCTCCTAACTCCTAGG+AGG | + | chr4_2:58007740-58007759 | None:intergenic | 45.0% | |
| !! | GCCACTGATTCTGAAAGTGA+AGG | - | chr4_2:58008062-58008081 | Msa0610290:intron | 45.0% |
| CTACGCAGATACCGTATTGA+TGG | + | chr4_2:58008327-58008346 | None:intergenic | 45.0% | |
| TGAAGTCAGACACCAGTGAA+TGG | - | chr4_2:58008564-58008583 | Msa0610290:intron | 45.0% | |
| !! | GAGGATTAGAAGCACCACAA+GGG | + | chr4_2:58008826-58008845 | None:intergenic | 45.0% |
| !! | AGAGGATTAGAAGCACCACA+AGG | + | chr4_2:58008827-58008846 | None:intergenic | 45.0% |
| GGTTCCTAACACACTCACAA+TGG | + | chr4_2:58009237-58009256 | None:intergenic | 45.0% | |
| TAGAAGGGGAAATCCTAGGA+GGG | + | chr4_2:58009313-58009332 | None:intergenic | 45.0% | |
| TGCTCAAAGATGCAGAGTCA+AGG | - | chr4_2:58009823-58009842 | Msa0610290:intron | 45.0% | |
| TGCTCCACCAACTGGAAAAT+GGG | - | chr4_2:58010022-58010041 | Msa0610290:CDS | 45.0% | |
| ! | TTTGGTCCCCATTTTCCAGT+TGG | + | chr4_2:58010032-58010051 | None:intergenic | 45.0% |
| ! | TCGAGACTGCAAGGAGTATA+AGG | + | chr4_2:58010201-58010220 | None:intergenic | 45.0% |
| TCTGATATCTCCTGCTCACA+AGG | - | chr4_2:58010296-58010315 | Msa0610290:intron | 45.0% | |
| CTGATATCTCCTGCTCACAA+GGG | - | chr4_2:58010297-58010316 | Msa0610290:intron | 45.0% | |
| ! | TGTCTACCTGACTGATTCAC+GGG | + | chr4_2:58010943-58010962 | None:intergenic | 45.0% |
| CAAAGTCTGCCCCTATAAAC+AGG | - | chr4_2:58011427-58011446 | Msa0610290:intron | 45.0% | |
| !! | TCCTGGCTAGCCTGTTTATA+GGG | + | chr4_2:58011440-58011459 | None:intergenic | 45.0% |
| ACCAAAACCTTACCCCAAAC+GGG | + | chr4_2:58011480-58011499 | None:intergenic | 45.0% | |
| ! | AGTTTTCTTTTCACAGGCGC+TGG | - | chr4_2:58011611-58011630 | Msa0610290:CDS | 45.0% |
| ! | GTTTTCTTTTCACAGGCGCT+GGG | - | chr4_2:58011612-58011631 | Msa0610290:CDS | 45.0% |
| ! | CTAGTTTGTGGGGTTTCTCA+TGG | - | chr4_2:58012107-58012126 | Msa0610290:intron | 45.0% |
| AAAGCTACATACCTGCCATG+AGG | + | chr4_2:58012396-58012415 | None:intergenic | 45.0% | |
| TTTCTTCCTGACAAAGGGCT+GGG | + | chr4_2:58012428-58012447 | None:intergenic | 45.0% | |
| ! | TTTTCTTCCTGACAAAGGGC+TGG | + | chr4_2:58012429-58012448 | None:intergenic | 45.0% |
| CTGGTTGTTCCGAATTCAGT+AGG | + | chr4_2:58012560-58012579 | None:intergenic | 45.0% | |
| CCCCAGCCAATACCAAATTT+GGG | + | chr4_2:58012766-58012785 | None:intergenic | 45.0% | |
| !! | CCCAAATTTGGTATTGGCTG+GGG | - | chr4_2:58012763-58012782 | Msa0610290:CDS | 45.0% |
| ACCCCAGCCAATACCAAATT+TGG | + | chr4_2:58012767-58012786 | None:intergenic | 45.0% | |
| !! | ATTTGGTATTGGCTGGGGTT+AGG | - | chr4_2:58012768-58012787 | Msa0610290:CDS | 45.0% |
| !! | TTTGGTATTGGCTGGGGTTA+GGG | - | chr4_2:58012769-58012788 | Msa0610290:CDS | 45.0% |
| GCCAAACCAGATGAGACATA+AGG | + | chr4_2:58012837-58012856 | None:intergenic | 45.0% | |
| CACAATGACTACTTGGTCTG+TGG | - | chr4_2:58012906-58012925 | Msa0610290:intron | 45.0% | |
| AAATGGAACGGGCAATCTGA+AGG | + | chr4_2:58012936-58012955 | None:intergenic | 45.0% | |
| ACGCGAGGAGAAGAGAAATG+AGG | + | chr4_2:58005046-58005065 | None:intergenic | 50.0% | |
| ! | GAGGAATGGGTCTTTGGGTT+TGG | + | chr4_2:58005093-58005112 | None:intergenic | 50.0% |
| GATTCCGAGGAATGGGTCTT+TGG | + | chr4_2:58005099-58005118 | None:intergenic | 50.0% | |
| ! | GAAATGACGATGACGGTTGC+TGG | - | chr4_2:58005182-58005201 | Msa0610290:three_prime_UTR | 50.0% |
| CGAGACGAAAACAGAGACAC+AGG | + | chr4_2:58005475-58005494 | None:intergenic | 50.0% | |
| GCAGTGCAACAAGACGAGTA+TGG | - | chr4_2:58006148-58006167 | Msa0610290:intron | 50.0% | |
| CAGCCTCCCAGCATGTATTT+GGG | + | chr4_2:58006436-58006455 | None:intergenic | 50.0% | |
| CAAATACATGCTGGGAGGCT+GGG | - | chr4_2:58006435-58006454 | Msa0610290:intron | 50.0% | |
| ! | TGAACACGCACATTTGGCTC+TGG | - | chr4_2:58006532-58006551 | Msa0610290:intron | 50.0% |
| !! | TTTGGCTCTGGAGAAGGATG+AGG | - | chr4_2:58006544-58006563 | Msa0610290:intron | 50.0% |
| TGGCACTTCTTTGTCACGTC+TGG | + | chr4_2:58007054-58007073 | None:intergenic | 50.0% | |
| GAAACAGAAGAAGGAGGCTG+AGG | - | chr4_2:58007401-58007420 | Msa0610290:CDS | 50.0% | |
| GAAGAAGGAGGCTGAGGAAA+AGG | - | chr4_2:58007407-58007426 | Msa0610290:CDS | 50.0% | |
| TCATCCTCCTAGGAGTTAGG+AGG | - | chr4_2:58007733-58007752 | Msa0610290:intron | 50.0% | |
| CTACTCCATCATGTGGTCAG+TGG | - | chr4_2:58007953-58007972 | Msa0610290:intron | 50.0% | |
| !! | GGTCATAATGAGGTACCGGT+AGG | - | chr4_2:58008449-58008468 | Msa0610290:intron | 50.0% |
| !! | GATTAGAAGCACCACAAGGG+AGG | + | chr4_2:58008823-58008842 | None:intergenic | 50.0% |
| GTAGAAGGGGAAATCCTAGG+AGG | + | chr4_2:58009314-58009333 | None:intergenic | 50.0% | |
| CTTAAATACGAGCCACTCGC+AGG | - | chr4_2:58009763-58009782 | Msa0610290:CDS | 50.0% | |
| ! | TACCTGAAACCTTGGTGCAG+TGG | + | chr4_2:58009890-58009909 | None:intergenic | 50.0% |
| TGCGATGCTACCTGAAACCT+TGG | + | chr4_2:58009898-58009917 | None:intergenic | 50.0% | |
| ! | AAGGTTTCAGGTAGCATCGC+AGG | - | chr4_2:58009897-58009916 | Msa0610290:intron | 50.0% |
| TGATTACCTGCTCCACCAAC+TGG | - | chr4_2:58010014-58010033 | Msa0610290:CDS | 50.0% | |
| !!! | CATTTTCCAGTTGGTGGAGC+AGG | + | chr4_2:58010023-58010042 | None:intergenic | 50.0% |
| CTGCTCCACCAACTGGAAAA+TGG | - | chr4_2:58010021-58010040 | Msa0610290:CDS | 50.0% | |
| GCTCCACCAACTGGAAAATG+GGG | - | chr4_2:58010023-58010042 | Msa0610290:CDS | 50.0% | |
| ! | TGGAGTATCTCTGGTTCCCA+CGG | - | chr4_2:58010059-58010078 | Msa0610290:intron | 50.0% |
| ! | CTTGTTGCTTCACGTTGGAC+AGG | - | chr4_2:58010513-58010532 | Msa0610290:CDS | 50.0% |
| CGTTGGACAGGAGAAGATGT+TGG | - | chr4_2:58010525-58010544 | Msa0610290:CDS | 50.0% | |
| ! | TCTGAAACTGACGACGACAC+CGG | - | chr4_2:58010642-58010661 | Msa0610290:CDS | 50.0% |
| GAGAGTGAACCAGACTTGTC+AGG | - | chr4_2:58010747-58010766 | Msa0610290:intron | 50.0% | |
| AGATGCTGCTCGTATACGCA+AGG | - | chr4_2:58011032-58011051 | Msa0610290:intron | 50.0% | |
| CAATGCTACAGGTCCAGCAA+AGG | - | chr4_2:58011229-58011248 | Msa0610290:intron | 50.0% | |
| !! | CCTGGCTAGCCTGTTTATAG+GGG | + | chr4_2:58011439-58011458 | None:intergenic | 50.0% |
| !! | CTCCTGGCTAGCCTGTTTAT+AGG | + | chr4_2:58011441-58011460 | None:intergenic | 50.0% |
| ! | CTATAAACAGGCTAGCCAGG+AGG | - | chr4_2:58011439-58011458 | Msa0610290:CDS | 50.0% |
| AAAACCTTACCCCAAACGGG+TGG | + | chr4_2:58011477-58011496 | None:intergenic | 50.0% | |
| !! | ACCCGTTTGGGGTAAGGTTT+TGG | - | chr4_2:58011476-58011495 | Msa0610290:CDS | 50.0% |
| ATTGCTGGAACGGTCCTGAT+AGG | - | chr4_2:58011683-58011702 | Msa0610290:intron | 50.0% | |
| CGGTCCTGATAGGAGTTTGA+AGG | - | chr4_2:58011693-58011712 | Msa0610290:intron | 50.0% | |
| TTCTTCCTGACAAAGGGCTG+GGG | + | chr4_2:58012427-58012446 | None:intergenic | 50.0% | |
| CACAACTCATCACGGCTTTC+TGG | + | chr4_2:58012579-58012598 | None:intergenic | 50.0% | |
| ! | ACTAGGAGCGTGTTTGGCTT+TGG | - | chr4_2:58012802-58012821 | Msa0610290:CDS | 50.0% |
| !! | CTAGGAGCGTGTTTGGCTTT+GGG | - | chr4_2:58012803-58012822 | Msa0610290:CDS | 50.0% |
| !! | AGCGTGTTTGGCTTTGGGTT+GGG | - | chr4_2:58012808-58012827 | Msa0610290:CDS | 50.0% |
| GGGAGTCCTTATGTCTCATC+TGG | - | chr4_2:58012828-58012847 | Msa0610290:intron | 50.0% | |
| GCGACAGAAACGTCCCGTTA+TGG | + | chr4_2:58004944-58004963 | None:intergenic | 55.0% | |
| AGAATGGGACGAGAAACGCG+AGG | + | chr4_2:58005061-58005080 | None:intergenic | 55.0% | |
| GATTTCTGCGATTGCCCCGA+TGG | - | chr4_2:58005297-58005316 | Msa0610290:three_prime_UTR | 55.0% | |
| !! | ACCAGGTTCATCGGTGCCAT+CGG | + | chr4_2:58005316-58005335 | None:intergenic | 55.0% |
| GTGCCCAAATACATGCTGGG+AGG | - | chr4_2:58006430-58006449 | Msa0610290:intron | 55.0% | |
| CCAGCCTCCCAGCATGTATT+TGG | + | chr4_2:58006437-58006456 | None:intergenic | 55.0% | |
| CCAAATACATGCTGGGAGGC+TGG | - | chr4_2:58006434-58006453 | Msa0610290:intron | 55.0% | |
| !! | CGCACATTTGGCTCTGGAGA+AGG | - | chr4_2:58006538-58006557 | Msa0610290:intron | 55.0% |
| AATAGATGGGTGTGGGCACC+GGG | + | chr4_2:58007018-58007037 | None:intergenic | 55.0% | |
| GAATAGATGGGTGTGGGCAC+CGG | + | chr4_2:58007019-58007038 | None:intergenic | 55.0% | |
| ! | ACCCATCCATCTGTGCCACT+GGG | - | chr4_2:58007869-58007888 | Msa0610290:intron | 55.0% |
| ATATGCCCCAGTGGCACAGA+TGG | + | chr4_2:58007878-58007897 | None:intergenic | 55.0% | |
| ! | TTGGTGCAGTGGACTTGTGG+TGG | + | chr4_2:58009879-58009898 | None:intergenic | 55.0% |
| ACCACAAGTCCACTGCACCA+AGG | - | chr4_2:58009878-58009897 | Msa0610290:intron | 55.0% | |
| ! | ACCTTGGTGCAGTGGACTTG+TGG | + | chr4_2:58009882-58009901 | None:intergenic | 55.0% |
| GTCCACTGCACCAAGGTTTC+AGG | - | chr4_2:58009885-58009904 | Msa0610290:intron | 55.0% | |
| ! | GGTCCCCATTTTCCAGTTGG+TGG | + | chr4_2:58010029-58010048 | None:intergenic | 55.0% |
| TTCCCACGGATTCCATGAGC+TGG | - | chr4_2:58010073-58010092 | Msa0610290:intron | 55.0% | |
| TGCCAGCTCATGGAATCCGT+GGG | + | chr4_2:58010078-58010097 | None:intergenic | 55.0% | |
| !! | GCAGGCTTGTTGCTTCACGT+TGG | - | chr4_2:58010508-58010527 | Msa0610290:CDS | 55.0% |
| GCACAACAGATGACCCTTCG+TGG | - | chr4_2:58010857-58010876 | Msa0610290:intron | 55.0% | |
| ! | CTGACTGATTCACGGGTGTC+TGG | + | chr4_2:58010936-58010955 | None:intergenic | 55.0% |
| CAGACACCCGTGAATCAGTC+AGG | - | chr4_2:58010934-58010953 | Msa0610290:intron | 55.0% | |
| ! | CCCCTATAAACAGGCTAGCC+AGG | - | chr4_2:58011436-58011455 | Msa0610290:CDS | 55.0% |
| ! | TAAACAGGCTAGCCAGGAGG+AGG | - | chr4_2:58011442-58011461 | Msa0610290:CDS | 55.0% |
| ! | AAACAGGCTAGCCAGGAGGA+GGG | - | chr4_2:58011443-58011462 | Msa0610290:CDS | 55.0% |
| !! | CAGGCGCTGGGACAAATTTG+AGG | - | chr4_2:58011624-58011643 | Msa0610290:CDS | 55.0% |
| TGAACCAAGCCGTTGCGAGT+AGG | - | chr4_2:58012270-58012289 | Msa0610290:intron | 55.0% | |
| GAACCAAGCCGTTGCGAGTA+GGG | - | chr4_2:58012271-58012290 | Msa0610290:intron | 55.0% | |
| AATCCCTACTCGCAACGGCT+TGG | + | chr4_2:58012277-58012296 | None:intergenic | 55.0% | |
| AGGCCCATGAGACAGCAATC+AGG | + | chr4_2:58012376-58012395 | None:intergenic | 55.0% | |
| TTGCTGTCTCATGGGCCTCA+TGG | - | chr4_2:58012378-58012397 | Msa0610290:intron | 55.0% | |
| GTTAGGGAGCTCCTAGGACT+AGG | - | chr4_2:58012785-58012804 | Msa0610290:CDS | 55.0% | |
| CCAAACACGCTCCTAGTCCT+AGG | + | chr4_2:58012799-58012818 | None:intergenic | 55.0% | |
| ! | CCTAGGACTAGGAGCGTGTT+TGG | - | chr4_2:58012796-58012815 | Msa0610290:CDS | 55.0% |
| !! | GAGCGTGTTTGGCTTTGGGT+TGG | - | chr4_2:58012807-58012826 | Msa0610290:CDS | 55.0% |
| GGGGAGCGATTCCGAGGAAT+GGG | + | chr4_2:58005106-58005125 | None:intergenic | 60.0% | |
| TGGGGAGCGATTCCGAGGAA+TGG | + | chr4_2:58005107-58005126 | None:intergenic | 60.0% | |
| TTCCTCGGAATCGCTCCCCA+AGG | - | chr4_2:58005107-58005126 | Msa0610290:three_prime_UTR | 60.0% | |
| AACCTTGGGGAGCGATTCCG+AGG | + | chr4_2:58005112-58005131 | None:intergenic | 60.0% | |
| !! | CAGGTTCATCGGTGCCATCG+GGG | + | chr4_2:58005314-58005333 | None:intergenic | 60.0% |
| !! | CCAGGTTCATCGGTGCCATC+GGG | + | chr4_2:58005315-58005334 | None:intergenic | 60.0% |
| AGAGGGCTCTCCGGTTGATC+AGG | - | chr4_2:58007548-58007567 | Msa0610290:CDS | 60.0% | |
| CAGTGGCACAGATGGATGGG+TGG | + | chr4_2:58007870-58007889 | None:intergenic | 60.0% | |
| CACCCATCCATCTGTGCCAC+TGG | - | chr4_2:58007868-58007887 | Msa0610290:intron | 60.0% | |
| CCCCAGTGGCACAGATGGAT+GGG | + | chr4_2:58007873-58007892 | None:intergenic | 60.0% | |
| ! | CCCATCCATCTGTGCCACTG+GGG | - | chr4_2:58007870-58007889 | Msa0610290:intron | 60.0% |
| CGAGTGATGTGACCTGCGAG+TGG | + | chr4_2:58009778-58009797 | None:intergenic | 60.0% | |
| GTGCCAGCTCATGGAATCCG+TGG | + | chr4_2:58010079-58010098 | None:intergenic | 60.0% | |
| GGTGGGATTGTGCCAGCTCA+TGG | + | chr4_2:58010088-58010107 | None:intergenic | 60.0% | |
| GGCCATTCCACCACCCGTTT+GGG | - | chr4_2:58011464-58011483 | Msa0610290:CDS | 60.0% | |
| GCCATTCCACCACCCGTTTG+GGG | - | chr4_2:58011465-58011484 | Msa0610290:CDS | 60.0% | |
| !! | ACCCCAAACGGGTGGTGGAA+TGG | + | chr4_2:58011469-58011488 | None:intergenic | 60.0% |
| ! | TCCACCACCCGTTTGGGGTA+AGG | - | chr4_2:58011470-58011489 | Msa0610290:CDS | 60.0% |
| ACCTTACCCCAAACGGGTGG+TGG | + | chr4_2:58011474-58011493 | None:intergenic | 60.0% | |
| TGTCTCATGGGCCTCATGGC+AGG | - | chr4_2:58012382-58012401 | Msa0610290:intron | 60.0% | |
| TTCCTGACAAAGGGCTGGGG+TGG | + | chr4_2:58012424-58012443 | None:intergenic | 60.0% | |
| !! | CCCGATGGCACCGATGAACC+TGG | - | chr4_2:58005312-58005331 | Msa0610290:three_prime_UTR | 65.0% |
| GCCCCAGTGGCACAGATGGA+TGG | + | chr4_2:58007874-58007893 | None:intergenic | 65.0% | |
| TGGTGGAATGGCCCTCCTCC+TGG | + | chr4_2:58011457-58011476 | None:intergenic | 65.0% | |
| GGGCCATTCCACCACCCGTT+TGG | - | chr4_2:58011463-58011482 | Msa0610290:CDS | 65.0% | |
| AGCCACCCCAGCCCTTTGTC+AGG | - | chr4_2:58012419-58012438 | Msa0610290:intron | 65.0% | |
| GCTGGGGTTAGGGAGCTCCT+AGG | - | chr4_2:58012779-58012798 | Msa0610290:CDS | 65.0% | |
| GGTACATCGGCGTGTCCGCG+TGG | - | chr4_2:58005418-58005437 | Msa0610290:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 58004758 | 58013299 | 58004758 | ID=Msa0610290;Name=Msa0610290 |
| chr4_2 | mRNA | 58004758 | 58013299 | 58004758 | ID=Msa0610290-mRNA-1;Parent=Msa0610290;Name=Msa0610290-mRNA-1;_AED=0.11;_eAED=0.11;_QI=262|1|1|1|0.93|0.88|17|623|629 |
| chr4_2 | exon | 58004758 | 58005358 | 58004758 | ID=Msa0610290-mRNA-1:exon:15225;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58005436 | 58005520 | 58005436 | ID=Msa0610290-mRNA-1:exon:15224;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58005602 | 58005653 | 58005602 | ID=Msa0610290-mRNA-1:exon:15223;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58005770 | 58005831 | 58005770 | ID=Msa0610290-mRNA-1:exon:15222;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58006343 | 58006430 | 58006343 | ID=Msa0610290-mRNA-1:exon:15221;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58006571 | 58006639 | 58006571 | ID=Msa0610290-mRNA-1:exon:15220;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58006760 | 58006817 | 58006760 | ID=Msa0610290-mRNA-1:exon:15219;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58006922 | 58007023 | 58006922 | ID=Msa0610290-mRNA-1:exon:15218;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58007102 | 58007206 | 58007102 | ID=Msa0610290-mRNA-1:exon:15217;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58007289 | 58007598 | 58007289 | ID=Msa0610290-mRNA-1:exon:15216;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58009723 | 58009815 | 58009723 | ID=Msa0610290-mRNA-1:exon:15215;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58009948 | 58010043 | 58009948 | ID=Msa0610290-mRNA-1:exon:15214;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58010488 | 58010717 | 58010488 | ID=Msa0610290-mRNA-1:exon:15213;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58011428 | 58011667 | 58011428 | ID=Msa0610290-mRNA-1:exon:15212;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58012543 | 58012638 | 58012543 | ID=Msa0610290-mRNA-1:exon:15211;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58012724 | 58012840 | 58012724 | ID=Msa0610290-mRNA-1:exon:15210;Parent=Msa0610290-mRNA-1 |
| chr4_2 | exon | 58012929 | 58013299 | 58012929 | ID=Msa0610290-mRNA-1:exon:15209;Parent=Msa0610290-mRNA-1 |
| chr4_2 | five_prime_UTR | 58013038 | 58013299 | 58013038 | ID=Msa0610290-mRNA-1:five_prime_utr;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58012929 | 58013037 | 58012929 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58012724 | 58012840 | 58012724 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58012543 | 58012638 | 58012543 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58011428 | 58011667 | 58011428 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58010488 | 58010717 | 58010488 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58009948 | 58010043 | 58009948 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58009723 | 58009815 | 58009723 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58007289 | 58007598 | 58007289 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58007102 | 58007206 | 58007102 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58006922 | 58007023 | 58006922 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58006760 | 58006817 | 58006760 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58006571 | 58006639 | 58006571 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58006343 | 58006430 | 58006343 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58005770 | 58005831 | 58005770 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58005602 | 58005653 | 58005602 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | CDS | 58005458 | 58005520 | 58005458 | ID=Msa0610290-mRNA-1:cds;Parent=Msa0610290-mRNA-1 |
| chr4_2 | three_prime_UTR | 58005436 | 58005457 | 58005436 | ID=Msa0610290-mRNA-1:three_prime_utr;Parent=Msa0610290-mRNA-1 |
| chr4_2 | three_prime_UTR | 58004758 | 58005358 | 58004758 | ID=Msa0610290-mRNA-1:three_prime_utr;Parent=Msa0610290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
