AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0652230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652230 MtrunA17_Chr4g0045791 99.368 633 4 0 1 633 1 633 0.0 1321
Msa0652230 MtrunA17_Chr4g0069981 26.452 465 267 14 69 485 87 524 1.51e-28 121
Msa0652230 MtrunA17_Chr4g0014511 24.435 487 265 19 93 507 130 585 7.46e-24 107
Msa0652230 MtrunA17_Chr8g0344911 24.180 488 282 18 83 507 108 570 1.30e-19 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652230 AT3G59770.1 77.603 634 140 2 1 633 3 635 0.0 1063
Msa0652230 AT3G59770.3 77.603 634 140 2 1 633 3 635 0.0 1063
Msa0652230 AT3G59770.4 82.448 433 74 2 202 633 1 432 0.0 771
Msa0652230 AT3G59770.2 82.927 410 68 2 225 633 2 410 0.0 737
Msa0652230 AT1G17340.1 27.755 490 273 22 67 507 79 536 3.20e-29 124
Msa0652230 AT3G43220.2 25.667 487 268 18 59 485 61 513 3.22e-24 108
Msa0652230 AT5G20840.1 26.087 483 267 21 59 485 70 518 3.81e-24 108
Msa0652230 AT3G43220.1 25.667 487 268 18 59 485 61 513 4.32e-24 108
Msa0652230 AT3G43220.3 25.667 487 268 18 59 485 61 513 5.49e-24 107
Msa0652230 AT1G22620.1 23.605 466 262 16 112 507 137 578 1.02e-23 107
Msa0652230 AT3G14205.1 25.581 559 306 24 23 507 32 554 5.24e-22 101
Msa0652230 AT3G14205.2 26.615 387 197 15 179 507 22 379 3.24e-19 92.4

Find 235 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGAATATGTTAAGTATT+TGG 0.138570 4_3:-59948629 None:intergenic
TTCAGACCACAGAGAAATTT+TGG 0.146857 4_3:+59949029 Msa0652230:three_prime_UTR
ATATTCTCTTTGGGGTAAAA+AGG 0.172628 4_3:+59949537 Msa0652230:three_prime_UTR
AGGAGATAATGTGAGGAATA+TGG 0.218732 4_3:-59949468 None:intergenic
TCGTTGCAAATGTGGGATTT+TGG 0.234539 4_3:-59945222 None:intergenic
TGCTTAAGAACACATCAAAA+TGG 0.259641 4_3:+59948189 Msa0652230:CDS
ATATTAGGTTACGCTGCTTT+AGG 0.283629 4_3:+59945666 Msa0652230:CDS
TATTGCACACTTCCTTTATA+CGG 0.284799 4_3:-59947766 None:intergenic
CATGCCAGTGTAAAATTAAA+AGG 0.287838 4_3:+59948015 Msa0652230:CDS
AAAAGTCAATGAGTTGATTA+AGG 0.295418 4_3:+59948984 Msa0652230:three_prime_UTR
ATTCTTGGTAGAGCTATATT+AGG 0.295893 4_3:+59945651 Msa0652230:CDS
TGGTTGCCTCCAAGTCTTCA+TGG 0.295958 4_3:+59948269 Msa0652230:CDS
AGGAAAGTCAGAGTGTATTT+TGG 0.297373 4_3:+59947906 Msa0652230:CDS
AGTCTCTTCCACGGTTTATC+AGG 0.303048 4_3:-59948480 None:intergenic
ACATTGTGTTCATCTCTTGC+AGG 0.309332 4_3:+59946004 Msa0652230:CDS
ATCAAATGGACCCGGGTATT+GGG 0.311487 4_3:-59947979 None:intergenic
TAAGTTGCGTAGGGGCATTT+TGG 0.316386 4_3:-59949166 None:intergenic
GCCGATTTGAGAGCTGTTCT+TGG 0.329420 4_3:-59945272 None:intergenic
CCCTTGGCTAAATTTAAATC+TGG 0.330195 4_3:-59949697 None:intergenic
TTTGCAGAATGTCGAAGTTT+TGG 0.330329 4_3:+59947048 Msa0652230:CDS
TATCAAATGGACCCGGGTAT+TGG 0.334794 4_3:-59947980 None:intergenic
TATCCCCAGCAAGTAGAAAA+AGG 0.348446 4_3:-59948566 None:intergenic
AGCCTGATCCGGAGTTTGTT+TGG 0.349092 4_3:+59945937 Msa0652230:CDS
CAAAGAAAGAAGAGAATTAG+AGG 0.353451 4_3:-59949502 None:intergenic
TGGCGGAGGTTGTGTTTATA+CGG 0.357918 4_3:+59945746 Msa0652230:CDS
ATGTCGTGGTTCTAGTATTA+TGG 0.360201 4_3:-59948443 None:intergenic
GAGACCTTCAATGGTGGTTT+GGG 0.363427 4_3:+59948828 Msa0652230:three_prime_UTR
GCATTAACTTGCTTCGAAAC+GGG 0.366752 4_3:+59947881 Msa0652230:CDS
AAATAGTGAGCATCCTTCTT+GGG 0.378780 4_3:-59949736 None:intergenic
GACTTCAAATCGTAAAGCTT+TGG 0.384411 4_3:+59947846 Msa0652230:CDS
CATTCAATGAATAATAACTA+TGG 0.384894 4_3:+59948345 Msa0652230:CDS
GAGGTTGTGTTTATACGGTT+GGG 0.388052 4_3:+59945751 Msa0652230:CDS
AGAGAATTAGAGGGAGAGAG+TGG 0.395420 4_3:-59949492 None:intergenic
CAACCTCCGCCAGGTAAATT+CGG 0.396649 4_3:-59945735 None:intergenic
TGGGAATGAGCAGAACCGTT+TGG 0.397301 4_3:-59949133 None:intergenic
AAAATAGTGAGCATCCTTCT+TGG 0.398456 4_3:-59949737 None:intergenic
GGGAATGAGCAGAACCGTTT+GGG 0.399772 4_3:-59949132 None:intergenic
TCAGACTGTGATCCGTATAA+AGG 0.401512 4_3:+59947754 Msa0652230:CDS
TGATGAAACCACTCGTGAAA+TGG 0.402538 4_3:-59945303 None:intergenic
AGGTCAGCTAGTTGAGATAC+AGG 0.403033 4_3:-59948546 None:intergenic
TGCATTAACTTGCTTCGAAA+CGG 0.404544 4_3:+59947880 Msa0652230:CDS
TTGTTAGAGCTTGACATTGA+TGG 0.409188 4_3:+59945849 Msa0652230:CDS
AAATATGTGAGGGTATTTAT+AGG 0.410641 4_3:-59949444 None:intergenic
GAGACGGCCTTGCATAGAAC+GGG 0.412259 4_3:+59948859 Msa0652230:three_prime_UTR
GGAAGTTCAGGTCAGCTAGA+AGG 0.412958 4_3:+59947069 Msa0652230:CDS
GGAGGTTGTGTTTATACGGT+TGG 0.417970 4_3:+59945750 Msa0652230:CDS
GCCAGTCATAATTTATCAAA+TGG 0.420873 4_3:-59947993 None:intergenic
GGTTGCAAGAGTAGGATTCT+TGG 0.421641 4_3:+59945636 Msa0652230:CDS
AAGCGATCTGATGCAGTTAC+CGG 0.427192 4_3:+59948402 Msa0652230:CDS
TGAGACCTTCAATGGTGGTT+TGG 0.427764 4_3:+59948827 Msa0652230:three_prime_UTR
GATTCTGGTGGAGATGGAAC+GGG 0.429833 4_3:+59948888 Msa0652230:three_prime_UTR
GGAGATAATGTGAGGAATAT+GGG 0.430068 4_3:-59949467 None:intergenic
CTCGCCAAGTATCGAGTACC+AGG 0.431232 4_3:-59947129 None:intergenic
GAAGTAGAAGCCATTGTTGT+TGG 0.431507 4_3:+59949006 Msa0652230:three_prime_UTR
AGATATGCCTATGGATATAG+TGG 0.435154 4_3:-59948082 None:intergenic
TCTACGCCGTTTGTTAATGT+TGG 0.435171 4_3:+59945972 Msa0652230:CDS
TTCCAAACAAACTCCGGATC+AGG 0.435252 4_3:-59945939 None:intergenic
GAAGAGGAACAATTCCTATC+TGG 0.440519 4_3:+59947683 Msa0652230:CDS
GAGACTTGATATGGCATTTG+AGG 0.444221 4_3:+59948497 Msa0652230:CDS
CTCTTACAGCTCGTAGGAGC+AGG 0.447549 4_3:+59947100 Msa0652230:CDS
GTTACAAACGGATCGCGAAC+CGG 0.452075 4_3:+59945615 Msa0652230:CDS
CGCTTCGTAACGGAGGATTC+CGG 0.452102 4_3:-59945544 None:intergenic
GCCGTTTGTTAATGTTGGAT+TGG 0.455607 4_3:+59945977 Msa0652230:CDS
GTTGCAAAATGCACAGGTGC+AGG 0.458878 4_3:+59945797 Msa0652230:CDS
GCTTAAGAACACATCAAAAT+GGG 0.462042 4_3:+59948190 Msa0652230:CDS
AGGTGAGGTGAAGAATGTTA+TGG 0.462488 4_3:+59945824 Msa0652230:CDS
GGTGAACAACAAACAATTGA+AGG 0.464007 4_3:+59948036 Msa0652230:CDS
TTAAACTTTATTAGATCGAC+TGG 0.464702 4_3:+59947949 Msa0652230:CDS
ACACCCTGGTACTCGATACT+TGG 0.465252 4_3:+59947125 Msa0652230:CDS
AGTTCTGCACCCCACCAGAT+AGG 0.467503 4_3:-59947697 None:intergenic
GGAAGAGATTCTGGTGGAGA+TGG 0.470662 4_3:+59948882 Msa0652230:three_prime_UTR
TGATGAGGTGGAGGTGCGGC+TGG 0.475045 4_3:+59948930 Msa0652230:three_prime_UTR
CATGGAGCAATGTAGACGGC+TGG 0.475281 4_3:+59948287 Msa0652230:CDS
AATTCCCAAACCACCATTGA+AGG 0.477501 4_3:-59948832 None:intergenic
TGTTAGAGCTTGACATTGAT+GGG 0.477618 4_3:+59945850 Msa0652230:CDS
ACCAAGAACAGCTCTCAAAT+CGG 0.478341 4_3:+59945271 Msa0652230:five_prime_UTR
GGCGGTTAATCAGCCTGATC+CGG 0.479465 4_3:+59945926 Msa0652230:CDS
AACAAACAATTGAAGGGTTG+TGG 0.479894 4_3:+59948043 Msa0652230:CDS
CTTGATAGCGATGGTGCACT+TGG 0.480266 4_3:+59948318 Msa0652230:CDS
AACATATTCAATGAAGATAC+AGG 0.480439 4_3:+59948639 Msa0652230:CDS
TTCTCCCATCCAGGTGGCAG+TGG 0.482272 4_3:-59948381 None:intergenic
CTGGGAAGCTCCCCAATACC+CGG 0.483240 4_3:+59947968 Msa0652230:CDS
TGCTCCACTGCCACCTGGAT+GGG 0.483322 4_3:+59948377 Msa0652230:CDS
AATGGTGGTTTGGGAATTGA+CGG 0.483524 4_3:+59948837 Msa0652230:three_prime_UTR
AGCAAGTTAATGCATACTAT+AGG 0.484312 4_3:-59947871 None:intergenic
CTAAATTCATGTTTCAGTAC+AGG 0.488036 4_3:+59947156 Msa0652230:CDS
TAACGGAGGATTCCGGTGGT+TGG 0.488165 4_3:-59945537 None:intergenic
AAGAATCCTACTCTTGCAAC+CGG 0.490206 4_3:-59945634 None:intergenic
ATTCTGGAAATAAACGAGTC+TGG 0.490996 4_3:+59945168 Msa0652230:five_prime_UTR
AGGTTGTGTTTATACGGTTG+GGG 0.492767 4_3:+59945752 Msa0652230:CDS
CTGCTCCACTGCCACCTGGA+TGG 0.494457 4_3:+59948376 Msa0652230:CDS
TCGTCCGTTTCCGAGTAGAA+TGG 0.497228 4_3:+59945905 Msa0652230:CDS
AAAATAGTGAGTAGCCGACT+TGG 0.497337 4_3:+59949578 Msa0652230:three_prime_UTR
GGCAATGTTGAGACCTTCAA+TGG 0.499106 4_3:+59948819 Msa0652230:three_prime_UTR
TCCATTTGATAAATTATGAC+TGG 0.499380 4_3:+59947992 Msa0652230:CDS
GTTGAAAAGCTGACCAAAGT+TGG 0.500159 4_3:-59949339 None:intergenic
AAAAGGGATCAAAATTCGTC+GGG 0.500365 4_3:+59949554 Msa0652230:three_prime_UTR
TCAGATCGCTTCTCCCATCC+AGG 0.500556 4_3:-59948390 None:intergenic
GAGAATTAGAGGGAGAGAGT+GGG 0.502154 4_3:-59949491 None:intergenic
ACCAGATTTAAATTTAGCCA+AGG 0.503862 4_3:+59949696 Msa0652230:three_prime_UTR
TTGTTACCTTGTGATTCCAT+CGG 0.507453 4_3:-59945333 None:intergenic
GCGAGTATTCCGAATTTACC+TGG 0.510432 4_3:+59945726 Msa0652230:CDS
ATTGTGCTGATTCTTTGGAC+AGG 0.511682 4_3:+59948226 Msa0652230:CDS
TCATTTATCCGTTGTCGTGA+AGG 0.511782 4_3:-59948120 None:intergenic
ACCGTGGAAGAGACTTGATA+TGG 0.511918 4_3:+59948488 Msa0652230:CDS
GCAAGTTAACTCACGCTAGT+TGG 0.512006 4_3:+59949294 Msa0652230:three_prime_UTR
CTGGTTAAGTAGTGAAGAGT+GGG 0.513841 4_3:+59948949 Msa0652230:three_prime_UTR
ATAAACGAGTCTGGTTAAAA+CGG 0.515063 4_3:+59945177 Msa0652230:five_prime_UTR
GAACCGTTTGGGTAAAGAGC+AGG 0.516168 4_3:-59949121 None:intergenic
AGATTCTGGTGGAGATGGAA+CGG 0.518004 4_3:+59948887 Msa0652230:three_prime_UTR
TATACTGCTCCACTGCCACC+TGG 0.519536 4_3:+59948372 Msa0652230:CDS
GCCAATCCAACATTAACAAA+CGG 0.520526 4_3:-59945978 None:intergenic
AGCGAATGGGAGTGATGAGG+TGG 0.523910 4_3:+59948918 Msa0652230:three_prime_UTR
TGGGGAAGTGATAGACCGTT+GGG 0.525699 4_3:+59949598 Msa0652230:three_prime_UTR
AATTAGAGGGAGAGAGTGGG+AGG 0.525776 4_3:-59949488 None:intergenic
ATCTCCTTCAGATATGCCTA+TGG 0.526352 4_3:-59948091 None:intergenic
CCAGATTTAAATTTAGCCAA+GGG 0.528906 4_3:+59949697 Msa0652230:three_prime_UTR
ATTGCTCCATGAAGACTTGG+AGG 0.532990 4_3:-59948275 None:intergenic
ATCAAAATCCATTTCACGAG+TGG 0.533009 4_3:+59945295 Msa0652230:five_prime_UTR
AAATAGTGAGTAGCCGACTT+GGG 0.533063 4_3:+59949579 Msa0652230:three_prime_UTR
GTGTATCCGTTCGTGTGCTT+AGG 0.533622 4_3:-59945497 None:intergenic
TACATTGCTCCATGAAGACT+TGG 0.535337 4_3:-59948278 None:intergenic
TGGAATGCGAGCAACTCGTA+TGG 0.536265 4_3:+59947611 Msa0652230:CDS
CGGAGTTTGTTTGGAATGCG+TGG 0.537599 4_3:+59945946 Msa0652230:CDS
AATGCACAGGTGCAGGGGAA+AGG 0.537658 4_3:+59945804 Msa0652230:CDS
GCTTACGAATTCGTTACAAA+CGG 0.537866 4_3:+59945603 Msa0652230:CDS
TACGATTATGTATACTTCGT+CGG 0.538807 4_3:-59945472 None:intergenic
CTCGTTTCGCTTCGTAACGG+AGG 0.539357 4_3:-59945551 None:intergenic
CGCCACACGTATGTGTTGAA+AGG 0.540305 4_3:-59947661 None:intergenic
ATTCATGCAACTCTTTACAC+TGG 0.540314 4_3:+59948588 Msa0652230:CDS
TGGTACTCGATACTTGGCGA+GGG 0.542864 4_3:+59947131 Msa0652230:CDS
TTGCAAAATGCACAGGTGCA+GGG 0.544772 4_3:+59945798 Msa0652230:CDS
AACTTGCTTCGAAACGGGGA+AGG 0.547167 4_3:+59947886 Msa0652230:CDS
CATAATTTATCAAATGGACC+CGG 0.548013 4_3:-59947987 None:intergenic
ACCGCCATTCTACTCGGAAA+CGG 0.548524 4_3:-59945909 None:intergenic
AAAGAAAGAAGAGAATTAGA+GGG 0.548622 4_3:-59949501 None:intergenic
AACGCAAGTTAAGTTGCGTA+GGG 0.549504 4_3:-59949175 None:intergenic
GAACCTGCTCTTTACCCAAA+CGG 0.550609 4_3:+59949118 Msa0652230:three_prime_UTR
TGCAAAATGCACAGGTGCAG+GGG 0.551026 4_3:+59945799 Msa0652230:CDS
GGAGACGGCCTTGCATAGAA+CGG 0.552788 4_3:+59948858 Msa0652230:three_prime_UTR
CGCGAACCGGTTGCAAGAGT+AGG 0.553705 4_3:+59945628 Msa0652230:CDS
ATTGAGTTCGTTGCAAATGT+GGG 0.554572 4_3:-59945229 None:intergenic
TCAAATGGACCCGGGTATTG+GGG 0.555738 4_3:-59947978 None:intergenic
GTTAACTCACGCTAGTTGGC+CGG 0.556477 4_3:+59949298 Msa0652230:three_prime_UTR
TTGGGGAAGTGATAGACCGT+TGG 0.558297 4_3:+59949597 Msa0652230:three_prime_UTR
TTGGTTGTTAAGCTGTTGAG+AGG 0.561481 4_3:-59945253 None:intergenic
GATTCCGTTGCAAAATGCAC+AGG 0.562598 4_3:+59945791 Msa0652230:CDS
TGATTAACCGCCATTCTACT+CGG 0.562632 4_3:-59945915 None:intergenic
AACCTCGTTTCGCTTCGTAA+CGG 0.563242 4_3:-59945554 None:intergenic
ACGAACCTGAGTAACATCTT+CGG 0.563992 4_3:+59948798 Msa0652230:three_prime_UTR
TAACGCAAGTTAAGTTGCGT+AGG 0.564481 4_3:-59949176 None:intergenic
AATTGAGTTCGTTGCAAATG+TGG 0.566730 4_3:-59945230 None:intergenic
GAAAATACATCATCAACCCT+TGG 0.569552 4_3:-59949713 None:intergenic
CATTAACTTGCTTCGAAACG+GGG 0.569606 4_3:+59947882 Msa0652230:CDS
CACGCATTCCAAACAAACTC+CGG 0.570212 4_3:-59945945 None:intergenic
GAGGAACAATTCCTATCTGG+TGG 0.571019 4_3:+59947686 Msa0652230:CDS
GTTTCATCATCGTTAACCGA+TGG 0.571759 4_3:+59945317 Msa0652230:exon
CTCCGTTACGAAGCGAAACG+AGG 0.573432 4_3:+59945552 Msa0652230:CDS
ATGGAGCAATGTAGACGGCT+GGG 0.574030 4_3:+59948288 Msa0652230:CDS
GTTGAAAGGTACACTTTGAC+CGG 0.574055 4_3:-59947647 None:intergenic
ATACGGTTGGGGAGAGTCAG+TGG 0.575288 4_3:+59945763 Msa0652230:CDS
CACTGTTACAGGAAATGAAG+TGG 0.578291 4_3:+59947591 Msa0652230:intron
CATTGCCGAAGATGTTACTC+AGG 0.579862 4_3:-59948803 None:intergenic
TCAATGAATAATAACTATGG+TGG 0.581045 4_3:+59948348 Msa0652230:CDS
ATTCCGAATTTACCTGGCGG+AGG 0.583044 4_3:+59945732 Msa0652230:CDS
CAGATTTAAAATTATCCCAA+CGG 0.585116 4_3:-59949613 None:intergenic
GTATGGGTCCCTAAAAGAGC+CGG 0.589239 4_3:+59947628 Msa0652230:CDS
GAGTGGGAGGAGATAATGTG+AGG 0.591080 4_3:-59949475 None:intergenic
GTATAAACACAACCTCCGCC+AGG 0.594189 4_3:-59945744 None:intergenic
GGAATGCGAGCAACTCGTAT+GGG 0.596006 4_3:+59947612 Msa0652230:CDS
ATCAAAGAATAGTCACAGCT+CGG 0.596545 4_3:+59949096 Msa0652230:three_prime_UTR
ATTCTGGTGGAGATGGAACG+GGG 0.597352 4_3:+59948889 Msa0652230:three_prime_UTR
AAAGCACCCACTATATCCAT+AGG 0.598667 4_3:+59948075 Msa0652230:CDS
AGGAACAATTCCTATCTGGT+GGG 0.599530 4_3:+59947687 Msa0652230:CDS
TTCATGCAACTCTTTACACT+GGG 0.601059 4_3:+59948589 Msa0652230:CDS
CTGGTACTCGATACTTGGCG+AGG 0.601458 4_3:+59947130 Msa0652230:CDS
CGGAATCTAAATATACGAGC+TGG 0.602745 4_3:+59947820 Msa0652230:CDS
GCCATATCAAGTCTCTTCCA+CGG 0.603401 4_3:-59948489 None:intergenic
AATAGTGAGCATCCTTCTTG+GGG 0.603728 4_3:-59949735 None:intergenic
ATAGGTAGAAATGTGAACCT+AGG 0.604427 4_3:-59949426 None:intergenic
TAACTTGCGCTAGTGCTAAG+TGG 0.605000 4_3:-59949279 None:intergenic
AACACATACGTGTGGCGAAG+AGG 0.605104 4_3:+59947667 Msa0652230:CDS
GGTACTCGATACTTGGCGAG+GGG 0.607803 4_3:+59947132 Msa0652230:CDS
GTGAACAACAAACAATTGAA+GGG 0.608756 4_3:+59948037 Msa0652230:CDS
AGGAATATGGGAAATATGTG+AGG 0.612798 4_3:-59949455 None:intergenic
GGAATATCACTTGATAGCGA+TGG 0.613855 4_3:+59948309 Msa0652230:CDS
GCTGGTTAAGTAGTGAAGAG+TGG 0.614564 4_3:+59948948 Msa0652230:three_prime_UTR
GGTTTGGGAATTGACGGAGA+CGG 0.614847 4_3:+59948843 Msa0652230:three_prime_UTR
TTGTTGCTCTTACAGCTCGT+AGG 0.617400 4_3:+59947094 Msa0652230:CDS
TCTTCATGGAGCAATGTAGA+CGG 0.620303 4_3:+59948283 Msa0652230:CDS
GGTCTATCACTTCCCCAAGT+CGG 0.621721 4_3:-59949592 None:intergenic
GGAACAATTCCTATCTGGTG+GGG 0.624893 4_3:+59947688 Msa0652230:CDS
GGTTGTATCTAACATAAATG+TGG 0.628513 4_3:-59949405 None:intergenic
ATTACTTGCCTTCACGACAA+CGG 0.628772 4_3:+59948112 Msa0652230:CDS
ACATGGATGCATCCATGTCG+TGG 0.629281 4_3:-59948457 None:intergenic
TTCTGGTGGAGATGGAACGG+GGG 0.632481 4_3:+59948890 Msa0652230:three_prime_UTR
AATGTTGAGACCTTCAATGG+TGG 0.632812 4_3:+59948822 Msa0652230:three_prime_UTR
TTCCACGGTTTATCAGGACA+TGG 0.636915 4_3:-59948474 None:intergenic
ATTTATGTTAGATACAACCT+AGG 0.637786 4_3:+59949409 Msa0652230:three_prime_UTR
GGAATATGGGAAATATGTGA+GGG 0.640049 4_3:-59949454 None:intergenic
CGTTAACCGATGGAATCACA+AGG 0.642247 4_3:+59945327 Msa0652230:exon
TGGGAAGCTCCCCAATACCC+GGG 0.644374 4_3:+59947969 Msa0652230:CDS
ATATCCATAGGCATATCTGA+AGG 0.645098 4_3:+59948087 Msa0652230:CDS
AATAGTGAGTAGCCGACTTG+GGG 0.646490 4_3:+59949580 Msa0652230:three_prime_UTR
TCCGTTTCCGAGTAGAATGG+CGG 0.646603 4_3:+59945908 Msa0652230:CDS
TTCGTAACGGAGGATTCCGG+TGG 0.648024 4_3:-59945541 None:intergenic
GAATGGGAGTGATGAGGTGG+AGG 0.648543 4_3:+59948921 Msa0652230:three_prime_UTR
CTCTACGTAGATCCAACCAC+CGG 0.650575 4_3:+59945525 Msa0652230:CDS
GGAGTGATGAGGTGGAGGTG+CGG 0.651486 4_3:+59948926 Msa0652230:three_prime_UTR
GATATGCCTATGGATATAGT+GGG 0.651960 4_3:-59948081 None:intergenic
GATAGCGAATGGGAGTGATG+AGG 0.656827 4_3:+59948915 Msa0652230:three_prime_UTR
GTGGTCTGAACCAACAACAA+TGG 0.657519 4_3:-59949016 None:intergenic
TAAACTTTATTAGATCGACT+GGG 0.658497 4_3:+59947950 Msa0652230:CDS
TCTGGTGGAGATGGAACGGG+GGG 0.661253 4_3:+59948891 Msa0652230:three_prime_UTR
TACCTTTCAACACATACGTG+TGG 0.666361 4_3:+59947659 Msa0652230:CDS
TGAGTAAGAGATACGATACT+CGG 0.666835 4_3:+59947800 Msa0652230:CDS
CTCCTCCCAAAATTTCTCTG+TGG 0.669397 4_3:-59949035 None:intergenic
ATAATTTATCAAATGGACCC+GGG 0.671673 4_3:-59947986 None:intergenic
CGTAAGCCTAAGCACACGAA+CGG 0.673665 4_3:+59945491 Msa0652230:CDS
AAAAGTAATCAATCTTCGTG+GGG 0.674667 4_3:-59949761 None:intergenic
AGACGGCCTTGCATAGAACG+GGG 0.674721 4_3:+59948860 Msa0652230:three_prime_UTR
ATAATACTAGAACCACGACA+TGG 0.675726 4_3:+59948445 Msa0652230:CDS
GTACTCGATACTTGGCGAGG+GGG 0.690293 4_3:+59947133 Msa0652230:CDS
GACGGCCTTGCATAGAACGG+GGG 0.692045 4_3:+59948861 Msa0652230:three_prime_UTR
ACAGGTGCAGGGGAAAGGTG+AGG 0.692165 4_3:+59945809 Msa0652230:CDS
TGGTTAAGTAGTGAAGAGTG+GGG 0.700929 4_3:+59948950 Msa0652230:three_prime_UTR
GGTTAAGTAGTGAAGAGTGG+GGG 0.706478 4_3:+59948951 Msa0652230:three_prime_UTR
ATCCATGTCCTGATAAACCG+TGG 0.710028 4_3:+59948472 Msa0652230:CDS
GATCGCTTCTCCCATCCAGG+TGG 0.717349 4_3:-59948387 None:intergenic
CAACGGATAAATGATTGCAG+AGG 0.719820 4_3:+59948129 Msa0652230:CDS
ACGCAAGTTAAGTTGCGTAG+GGG 0.730301 4_3:-59949174 None:intergenic
TCGCCAAGTATCGAGTACCA+GGG 0.732442 4_3:-59947128 None:intergenic
CGTAGGAGCAGGTTACACCC+TGG 0.736716 4_3:+59947111 Msa0652230:CDS
ATCTAGCGTTACGACTACAA+CGG 0.741403 4_3:-59945448 None:intergenic
AGTATTCCGAATTTACCTGG+CGG 0.766404 4_3:+59945729 Msa0652230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGGAAATTATTTTATTTA+GGG + chr4_3:59946456-59946475 Msa0652230:intron 10.0%
!!! GTAAGGAAATTATTTTATTT+AGG + chr4_3:59946455-59946474 Msa0652230:intron 15.0%
!! ATTATCAAGAAATATCTATA+AGG - chr4_3:59946927-59946946 None:intergenic 15.0%
!!! TCAAACAAAATTTTAAGTTA+AGG - chr4_3:59947298-59947317 None:intergenic 15.0%
!!! TTTTTTTTCAATATTCTCTT+TGG + chr4_3:59949527-59949546 Msa0652230:three_prime_UTR 15.0%
!!! TTTTTTTCAATATTCTCTTT+GGG + chr4_3:59949528-59949547 Msa0652230:three_prime_UTR 15.0%
!!! GTTTATTTCCAGAATTTTTT+TGG - chr4_3:59945163-59945182 None:intergenic 20.0%
!! ATTAAGTTATTTATCCAAAC+AGG + chr4_3:59946259-59946278 Msa0652230:intron 20.0%
!!! TTGTTTTGAAATGAGTTATA+AGG - chr4_3:59946628-59946647 None:intergenic 20.0%
!! TCTTAATTGCTATATATGAA+TGG - chr4_3:59946975-59946994 None:intergenic 20.0%
!! ACTATGGTCAATAATTTAAT+AGG - chr4_3:59947246-59947265 None:intergenic 20.0%
!! AAGTATTCAGTTATTCATTA+CGG + chr4_3:59947351-59947370 Msa0652230:intron 20.0%
!! CATTCAATGAATAATAACTA+TGG + chr4_3:59948345-59948364 Msa0652230:CDS 20.0%
!!! GTCAATAAAATATGTTTTTC+CGG - chr4_3:59948424-59948443 None:intergenic 20.0%
!! CATTGAATATGTTAAGTATT+TGG - chr4_3:59948632-59948651 None:intergenic 20.0%
!!! TTTTTTCAATATTCTCTTTG+GGG + chr4_3:59949529-59949548 Msa0652230:three_prime_UTR 20.0%
!!! TATTTCCAGAATTTTTTTGG+AGG - chr4_3:59945160-59945179 None:intergenic 25.0%
!!! TATTCCTCTTTCTTTTTTTC+AGG + chr4_3:59945408-59945427 Msa0652230:intron 25.0%
! TTTCAATCTACTTGCATAAA+TGG + chr4_3:59946050-59946069 Msa0652230:intron 25.0%
!! ATTAGTTCATCCAAACTTTT+TGG + chr4_3:59946405-59946424 Msa0652230:intron 25.0%
!! TTAGTTCATCCAAACTTTTT+GGG + chr4_3:59946406-59946425 Msa0652230:intron 25.0%
! TTAAATTATTGACCATAGTC+AGG + chr4_3:59947247-59947266 Msa0652230:intron 25.0%
! AAAAACCTAAACAAGCAAAA+TGG - chr4_3:59947393-59947412 None:intergenic 25.0%
! TTAAACTTTATTAGATCGAC+TGG + chr4_3:59947949-59947968 Msa0652230:CDS 25.0%
! TAAACTTTATTAGATCGACT+GGG + chr4_3:59947950-59947969 Msa0652230:CDS 25.0%
! TCCATTTGATAAATTATGAC+TGG + chr4_3:59947992-59948011 Msa0652230:CDS 25.0%
!!! TTCACCTTTTAATTTTACAC+TGG - chr4_3:59948022-59948041 None:intergenic 25.0%
!!! TTTTAATTGTGCTGATTCTT+TGG + chr4_3:59948221-59948240 Msa0652230:CDS 25.0%
! TCAATGAATAATAACTATGG+TGG + chr4_3:59948348-59948367 Msa0652230:CDS 25.0%
! AACATATTCAATGAAGATAC+AGG + chr4_3:59948639-59948658 Msa0652230:CDS 25.0%
!! AGGAAAGTTTAAACAGTTTT+CGG + chr4_3:59948659-59948678 Msa0652230:CDS 25.0%
!!! AAAAGTCAATGAGTTGATTA+AGG + chr4_3:59948984-59949003 Msa0652230:three_prime_UTR 25.0%
! ATTTATGTTAGATACAACCT+AGG + chr4_3:59949409-59949428 Msa0652230:three_prime_UTR 25.0%
!!! AAATATGTGAGGGTATTTAT+AGG - chr4_3:59949447-59949466 None:intergenic 25.0%
! AAAGAAAGAAGAGAATTAGA+GGG - chr4_3:59949504-59949523 None:intergenic 25.0%
!! CAGATTTAAAATTATCCCAA+CGG - chr4_3:59949616-59949635 None:intergenic 25.0%
! AAAAAGTAATCAATCTTCGT+GGG - chr4_3:59949765-59949784 None:intergenic 25.0%
! TAAAAAGTAATCAATCTTCG+TGG - chr4_3:59949766-59949785 None:intergenic 25.0%
!!! TACTTATTTTCTCCTTTTTG+GGG - chr4_3:59949789-59949808 None:intergenic 25.0%
!!! CTACTTATTTTCTCCTTTTT+GGG - chr4_3:59949790-59949809 None:intergenic 25.0%
!!! TCTACTTATTTTCTCCTTTT+TGG - chr4_3:59949791-59949810 None:intergenic 25.0%
ATAAACGAGTCTGGTTAAAA+CGG + chr4_3:59945177-59945196 Msa0652230:five_prime_UTR 30.0%
TACGATTATGTATACTTCGT+CGG - chr4_3:59945475-59945494 None:intergenic 30.0%
ATTCTTGGTAGAGCTATATT+AGG + chr4_3:59945651-59945670 Msa0652230:CDS 30.0%
TCTACTTGCATAAATGGTAT+AGG + chr4_3:59946056-59946075 Msa0652230:intron 30.0%
TTGCATAAATGGTATAGGTT+CGG + chr4_3:59946061-59946080 Msa0652230:intron 30.0%
TTATGCATTATGATCCTGTT+TGG - chr4_3:59946276-59946295 None:intergenic 30.0%
!!! ATCCAAACTTTTTGGGATTA+GGG + chr4_3:59946413-59946432 Msa0652230:intron 30.0%
!! TATTTTATTTAGGGCATGCT+TGG + chr4_3:59946465-59946484 Msa0652230:intron 30.0%
GCGAAGAATATAAATGAGTA+AGG - chr4_3:59946732-59946751 None:intergenic 30.0%
!!! ACTGTTTGTTAGTTTTGTCT+TGG + chr4_3:59946836-59946855 Msa0652230:intron 30.0%
TGCTATATATGAATGGTCAT+TGG - chr4_3:59946968-59946987 None:intergenic 30.0%
CTAAATTCATGTTTCAGTAC+AGG + chr4_3:59947156-59947175 Msa0652230:CDS 30.0%
!! AGCTTAGTCTTTTCATCTTA+TGG + chr4_3:59947204-59947223 Msa0652230:intron 30.0%
TTAAAGTTCAAAGCTTACGT+TGG - chr4_3:59947331-59947350 None:intergenic 30.0%
AGATATTAATGCATGTCAGT+AGG - chr4_3:59947445-59947464 None:intergenic 30.0%
TTTCTTCATTTACCTGAATC+AGG + chr4_3:59947464-59947483 Msa0652230:intron 30.0%
CAAATAGTGTGAAAGGAATT+AGG - chr4_3:59947516-59947535 None:intergenic 30.0%
TCAATCTAATTCACTGTTAC+AGG + chr4_3:59947580-59947599 Msa0652230:intron 30.0%
TATTGCACACTTCCTTTATA+CGG - chr4_3:59947769-59947788 None:intergenic 30.0%
AGCAAGTTAATGCATACTAT+AGG - chr4_3:59947874-59947893 None:intergenic 30.0%
ATAATTTATCAAATGGACCC+GGG - chr4_3:59947989-59948008 None:intergenic 30.0%
CATAATTTATCAAATGGACC+CGG - chr4_3:59947990-59948009 None:intergenic 30.0%
GCCAGTCATAATTTATCAAA+TGG - chr4_3:59947996-59948015 None:intergenic 30.0%
CATGCCAGTGTAAAATTAAA+AGG + chr4_3:59948015-59948034 Msa0652230:CDS 30.0%
GTGAACAACAAACAATTGAA+GGG + chr4_3:59948037-59948056 Msa0652230:CDS 30.0%
! ATCTGCAATGATGATTTTGT+AGG + chr4_3:59948159-59948178 Msa0652230:CDS 30.0%
TGCTTAAGAACACATCAAAA+TGG + chr4_3:59948189-59948208 Msa0652230:CDS 30.0%
GCTTAAGAACACATCAAAAT+GGG + chr4_3:59948190-59948209 Msa0652230:CDS 30.0%
! GCATTTTGGACTTTTACTTT+GGG - chr4_3:59949155-59949174 None:intergenic 30.0%
! AACAAACGTTTTTCCAACTT+TGG + chr4_3:59949326-59949345 Msa0652230:three_prime_UTR 30.0%
GTAAAAAAAACGTGTGAAAG+GGG - chr4_3:59949386-59949405 None:intergenic 30.0%
GGTAAAAAAAACGTGTGAAA+GGG - chr4_3:59949387-59949406 None:intergenic 30.0%
TGGTAAAAAAAACGTGTGAA+AGG - chr4_3:59949388-59949407 None:intergenic 30.0%
GGTTGTATCTAACATAAATG+TGG - chr4_3:59949408-59949427 None:intergenic 30.0%
CAAAGAAAGAAGAGAATTAG+AGG - chr4_3:59949505-59949524 None:intergenic 30.0%
!! ATATTCTCTTTGGGGTAAAA+AGG + chr4_3:59949537-59949556 Msa0652230:three_prime_UTR 30.0%
!! TATTCTCTTTGGGGTAAAAA+GGG + chr4_3:59949538-59949557 Msa0652230:three_prime_UTR 30.0%
AAAAAGGGATCAAAATTCGT+CGG + chr4_3:59949553-59949572 Msa0652230:three_prime_UTR 30.0%
ACCAGATTTAAATTTAGCCA+AGG + chr4_3:59949696-59949715 Msa0652230:three_prime_UTR 30.0%
CCAGATTTAAATTTAGCCAA+GGG + chr4_3:59949697-59949716 Msa0652230:three_prime_UTR 30.0%
AAAAGTAATCAATCTTCGTG+GGG - chr4_3:59949764-59949783 None:intergenic 30.0%
!!! GATTACTTTTTACCCCAAAA+AGG + chr4_3:59949774-59949793 Msa0652230:three_prime_UTR 30.0%
!!! CCAGAATTTTTTTGGAGGAA+TGG - chr4_3:59945155-59945174 None:intergenic 35.0%
CCATTCCTCCAAAAAAATTC+TGG + chr4_3:59945152-59945171 Msa0652230:five_prime_UTR 35.0%
! ATTCTGGAAATAAACGAGTC+TGG + chr4_3:59945168-59945187 Msa0652230:five_prime_UTR 35.0%
! GATTTTGGACTAACGGAAAT+AGG - chr4_3:59945210-59945229 None:intergenic 35.0%
! AATGTGGGATTTTGGACTAA+CGG - chr4_3:59945217-59945236 None:intergenic 35.0%
ATTGAGTTCGTTGCAAATGT+GGG - chr4_3:59945232-59945251 None:intergenic 35.0%
AATTGAGTTCGTTGCAAATG+TGG - chr4_3:59945233-59945252 None:intergenic 35.0%
ATCAAAATCCATTTCACGAG+TGG + chr4_3:59945295-59945314 Msa0652230:five_prime_UTR 35.0%
TTGTTACCTTGTGATTCCAT+CGG - chr4_3:59945336-59945355 None:intergenic 35.0%
AAAAGAAAGAGGAATAAGCG+CGG - chr4_3:59945404-59945423 None:intergenic 35.0%
!!! TCCTCTTTCTTTTTTTCAGG+TGG + chr4_3:59945411-59945430 Msa0652230:intron 35.0%
TCCACCTGAAAAAAAGAAAG+AGG - chr4_3:59945415-59945434 None:intergenic 35.0%
GCTTACGAATTCGTTACAAA+CGG + chr4_3:59945603-59945622 Msa0652230:CDS 35.0%
! ATATTAGGTTACGCTGCTTT+AGG + chr4_3:59945666-59945685 Msa0652230:CDS 35.0%
TTGTTAGAGCTTGACATTGA+TGG + chr4_3:59945849-59945868 Msa0652230:CDS 35.0%
TGTTAGAGCTTGACATTGAT+GGG + chr4_3:59945850-59945869 Msa0652230:CDS 35.0%
!!! AGCATTATTTTTGTGAGACG+AGG + chr4_3:59945874-59945893 Msa0652230:CDS 35.0%
!!! GCATTATTTTTGTGAGACGA+GGG + chr4_3:59945875-59945894 Msa0652230:CDS 35.0%
GCCAATCCAACATTAACAAA+CGG - chr4_3:59945981-59946000 None:intergenic 35.0%
! TAAATGGTATAGGTTCGGTT+TGG + chr4_3:59946066-59946085 Msa0652230:intron 35.0%
TACTCACTTGTGAAACTGTT+TGG + chr4_3:59946110-59946129 Msa0652230:intron 35.0%
AAACTGTTTGGTAGAGCTTA+TGG + chr4_3:59946122-59946141 Msa0652230:intron 35.0%
CGCAAGTAACATAATATGCT+AGG - chr4_3:59946334-59946353 None:intergenic 35.0%
ATTGCTTAAGTTCGTTGTAC+TGG + chr4_3:59946356-59946375 Msa0652230:intron 35.0%
!!! CATCCAAACTTTTTGGGATT+AGG + chr4_3:59946412-59946431 Msa0652230:intron 35.0%
TACCCTAATCCCAAAAAGTT+TGG - chr4_3:59946418-59946437 None:intergenic 35.0%
! AGACTCTTTGAGAAAGCTTA+CGG + chr4_3:59946529-59946548 Msa0652230:intron 35.0%
AGTAAGCTGTTTATCCAAAG+AGG + chr4_3:59946705-59946724 Msa0652230:intron 35.0%
GTAAGCTGTTTATCCAAAGA+GGG + chr4_3:59946706-59946725 Msa0652230:intron 35.0%
GACAATATTCGTGTGCTTTA+TGG + chr4_3:59946799-59946818 Msa0652230:intron 35.0%
ATATTCGTGTGCTTTATGGA+AGG + chr4_3:59946803-59946822 Msa0652230:intron 35.0%
GATTATTCTGTTGTCTCACT+TGG + chr4_3:59947009-59947028 Msa0652230:intron 35.0%
! TTTGCAGAATGTCGAAGTTT+TGG + chr4_3:59947048-59947067 Msa0652230:CDS 35.0%
!! TAAGCTCGAGAGTTGATAAT+AGG - chr4_3:59947190-59947209 None:intergenic 35.0%
! CTACTCCATTTTGCTTGTTT+AGG + chr4_3:59947385-59947404 Msa0652230:intron 35.0%
TCATTTACCTGAATCAGGAA+AGG + chr4_3:59947469-59947488 Msa0652230:intron 35.0%
TGAGTAAGAGATACGATACT+CGG + chr4_3:59947800-59947819 Msa0652230:CDS 35.0%
GACTTCAAATCGTAAAGCTT+TGG + chr4_3:59947846-59947865 Msa0652230:CDS 35.0%
!! TGCATTAACTTGCTTCGAAA+CGG + chr4_3:59947880-59947899 Msa0652230:CDS 35.0%
! AGGAAAGTCAGAGTGTATTT+TGG + chr4_3:59947906-59947925 Msa0652230:CDS 35.0%
GGTGAACAACAAACAATTGA+AGG + chr4_3:59948036-59948055 Msa0652230:CDS 35.0%
AACAAACAATTGAAGGGTTG+TGG + chr4_3:59948043-59948062 Msa0652230:CDS 35.0%
GATATGCCTATGGATATAGT+GGG - chr4_3:59948084-59948103 None:intergenic 35.0%
AGATATGCCTATGGATATAG+TGG - chr4_3:59948085-59948104 None:intergenic 35.0%
ATATCCATAGGCATATCTGA+AGG + chr4_3:59948087-59948106 Msa0652230:CDS 35.0%
!!! ACCAATGCTGCTAGTTTTTT+TGG + chr4_3:59948249-59948268 Msa0652230:CDS 35.0%
ACCAAAAAAACTAGCAGCAT+TGG - chr4_3:59948253-59948272 None:intergenic 35.0%
!! ATGTCGTGGTTCTAGTATTA+TGG - chr4_3:59948446-59948465 None:intergenic 35.0%
ATAATACTAGAACCACGACA+TGG + chr4_3:59948445-59948464 Msa0652230:CDS 35.0%
ATTCATGCAACTCTTTACAC+TGG + chr4_3:59948588-59948607 Msa0652230:CDS 35.0%
TTCATGCAACTCTTTACACT+GGG + chr4_3:59948589-59948608 Msa0652230:CDS 35.0%
! TTCAGACCACAGAGAAATTT+TGG + chr4_3:59949029-59949048 Msa0652230:three_prime_UTR 35.0%
! TCAGACCACAGAGAAATTTT+GGG + chr4_3:59949030-59949049 Msa0652230:three_prime_UTR 35.0%
ATCAAAGAATAGTCACAGCT+CGG + chr4_3:59949096-59949115 Msa0652230:three_prime_UTR 35.0%
! GGCATTTTGGACTTTTACTT+TGG - chr4_3:59949156-59949175 None:intergenic 35.0%
GAAAAACGTTTGTTCTTCAC+CGG - chr4_3:59949320-59949339 None:intergenic 35.0%
ATAGGTAGAAATGTGAACCT+AGG - chr4_3:59949429-59949448 None:intergenic 35.0%
GGAATATGGGAAATATGTGA+GGG - chr4_3:59949457-59949476 None:intergenic 35.0%
AGGAATATGGGAAATATGTG+AGG - chr4_3:59949458-59949477 None:intergenic 35.0%
GGAGATAATGTGAGGAATAT+GGG - chr4_3:59949470-59949489 None:intergenic 35.0%
AGGAGATAATGTGAGGAATA+TGG - chr4_3:59949471-59949490 None:intergenic 35.0%
AAAAGGGATCAAAATTCGTC+GGG + chr4_3:59949554-59949573 Msa0652230:three_prime_UTR 35.0%
! CAAGAAGTTCTTTTTACCCA+CGG - chr4_3:59949664-59949683 None:intergenic 35.0%
TGGGTAAAAAGAACTTCTTG+TGG + chr4_3:59949664-59949683 Msa0652230:three_prime_UTR 35.0%
CCCTTGGCTAAATTTAAATC+TGG - chr4_3:59949700-59949719 None:intergenic 35.0%
GAAAATACATCATCAACCCT+TGG - chr4_3:59949716-59949735 None:intergenic 35.0%
! ATGATGTATTTTCCCCAAGA+AGG + chr4_3:59949723-59949742 Msa0652230:three_prime_UTR 35.0%
AAATAGTGAGCATCCTTCTT+GGG - chr4_3:59949739-59949758 None:intergenic 35.0%
AAAATAGTGAGCATCCTTCT+TGG - chr4_3:59949740-59949759 None:intergenic 35.0%
! TCGTTGCAAATGTGGGATTT+TGG - chr4_3:59945225-59945244 None:intergenic 40.0%
TTGGTTGTTAAGCTGTTGAG+AGG - chr4_3:59945256-59945275 None:intergenic 40.0%
ACCAAGAACAGCTCTCAAAT+CGG + chr4_3:59945271-59945290 Msa0652230:five_prime_UTR 40.0%
TGATGAAACCACTCGTGAAA+TGG - chr4_3:59945306-59945325 None:intergenic 40.0%
GTTTCATCATCGTTAACCGA+TGG + chr4_3:59945317-59945336 Msa0652230:exon 40.0%
!!! GCGATTTTGATTGAGAAGTG+AGG - chr4_3:59945362-59945381 None:intergenic 40.0%
TAAGCGCGGTGAAATTAAGT+TGG - chr4_3:59945390-59945409 None:intergenic 40.0%
ATCTAGCGTTACGACTACAA+CGG - chr4_3:59945451-59945470 None:intergenic 40.0%
AAGAATCCTACTCTTGCAAC+CGG - chr4_3:59945637-59945656 None:intergenic 40.0%
! CTTTTCTTCTAATCGCAACG+AGG + chr4_3:59945697-59945716 Msa0652230:CDS 40.0%
AGTATTCCGAATTTACCTGG+CGG + chr4_3:59945729-59945748 Msa0652230:CDS 40.0%
GAGGTTGTGTTTATACGGTT+GGG + chr4_3:59945751-59945770 Msa0652230:CDS 40.0%
AGGTTGTGTTTATACGGTTG+GGG + chr4_3:59945752-59945771 Msa0652230:CDS 40.0%
AGGTGAGGTGAAGAATGTTA+TGG + chr4_3:59945824-59945843 Msa0652230:CDS 40.0%
TGATTAACCGCCATTCTACT+CGG - chr4_3:59945918-59945937 None:intergenic 40.0%
! TCTACGCCGTTTGTTAATGT+TGG + chr4_3:59945972-59945991 Msa0652230:CDS 40.0%
! GCCGTTTGTTAATGTTGGAT+TGG + chr4_3:59945977-59945996 Msa0652230:CDS 40.0%
ACATTGTGTTCATCTCTTGC+AGG + chr4_3:59946004-59946023 Msa0652230:CDS 40.0%
ACAAGCAACATCTGTAGGTA+AGG + chr4_3:59946438-59946457 Msa0652230:intron 40.0%
GTCGGTGGATAAGCTAAAAT+AGG - chr4_3:59946496-59946515 None:intergenic 40.0%
AGTCTCACAGATGGTTATGT+CGG - chr4_3:59946514-59946533 None:intergenic 40.0%
TTCTCAAAGAGTCTCACAGA+TGG - chr4_3:59946523-59946542 None:intergenic 40.0%
GCTTGAAACAGCTTATGACA+AGG + chr4_3:59946557-59946576 Msa0652230:intron 40.0%
TAAATGAGTAAGGCCCTCTT+TGG - chr4_3:59946722-59946741 None:intergenic 40.0%
!! GATAACTGTAGCTCTGAAGA+TGG + chr4_3:59946777-59946796 Msa0652230:intron 40.0%
GTGTGCTTTATGGAAGGTTT+AGG + chr4_3:59946809-59946828 Msa0652230:intron 40.0%
!! TCACTTGGTCTTGATGTGTA+GGG + chr4_3:59947024-59947043 Msa0652230:intron 40.0%
!!! TGTCGAAGTTTTGGAAGTTC+AGG + chr4_3:59947057-59947076 Msa0652230:CDS 40.0%
! TTAGCATGTTAGCCTGACTA+TGG - chr4_3:59947262-59947281 None:intergenic 40.0%
TAGTCAGGCTAACATGCTAA+AGG + chr4_3:59947262-59947281 Msa0652230:intron 40.0%
CAGGAAGCAAATAGTGTGAA+AGG - chr4_3:59947523-59947542 None:intergenic 40.0%
TGAAGTGATTAGCATGATGC+AGG - chr4_3:59947542-59947561 None:intergenic 40.0%
CACTGTTACAGGAAATGAAG+TGG + chr4_3:59947591-59947610 Msa0652230:intron 40.0%
! GTTGAAAGGTACACTTTGAC+CGG - chr4_3:59947650-59947669 None:intergenic 40.0%
TACCTTTCAACACATACGTG+TGG + chr4_3:59947659-59947678 Msa0652230:CDS 40.0%
GAAGAGGAACAATTCCTATC+TGG + chr4_3:59947683-59947702 Msa0652230:CDS 40.0%
AGGAACAATTCCTATCTGGT+GGG + chr4_3:59947687-59947706 Msa0652230:CDS 40.0%
TCAGACTGTGATCCGTATAA+AGG + chr4_3:59947754-59947773 Msa0652230:CDS 40.0%
CGGAATCTAAATATACGAGC+TGG + chr4_3:59947820-59947839 Msa0652230:CDS 40.0%
!! GCATTAACTTGCTTCGAAAC+GGG + chr4_3:59947881-59947900 Msa0652230:CDS 40.0%
!! CATTAACTTGCTTCGAAACG+GGG + chr4_3:59947882-59947901 Msa0652230:CDS 40.0%
! AAAGCACCCACTATATCCAT+AGG + chr4_3:59948075-59948094 Msa0652230:CDS 40.0%
ATCTCCTTCAGATATGCCTA+TGG - chr4_3:59948094-59948113 None:intergenic 40.0%
ATTACTTGCCTTCACGACAA+CGG + chr4_3:59948112-59948131 Msa0652230:CDS 40.0%
TCATTTATCCGTTGTCGTGA+AGG - chr4_3:59948123-59948142 None:intergenic 40.0%
CAACGGATAAATGATTGCAG+AGG + chr4_3:59948129-59948148 Msa0652230:CDS 40.0%
!! ATTGTGCTGATTCTTTGGAC+AGG + chr4_3:59948226-59948245 Msa0652230:CDS 40.0%
TACATTGCTCCATGAAGACT+TGG - chr4_3:59948281-59948300 None:intergenic 40.0%
TCTTCATGGAGCAATGTAGA+CGG + chr4_3:59948283-59948302 Msa0652230:CDS 40.0%
!! GGAATATCACTTGATAGCGA+TGG + chr4_3:59948309-59948328 Msa0652230:CDS 40.0%
GAGACTTGATATGGCATTTG+AGG + chr4_3:59948497-59948516 Msa0652230:CDS 40.0%
! CTGACCTTTTTCTACTTGCT+GGG + chr4_3:59948562-59948581 Msa0652230:CDS 40.0%
!! TGACCTTTTTCTACTTGCTG+GGG + chr4_3:59948563-59948582 Msa0652230:CDS 40.0%
TATCCCCAGCAAGTAGAAAA+AGG - chr4_3:59948569-59948588 None:intergenic 40.0%
ACGAACCTGAGTAACATCTT+CGG + chr4_3:59948798-59948817 Msa0652230:three_prime_UTR 40.0%
AATGTTGAGACCTTCAATGG+TGG + chr4_3:59948822-59948841 Msa0652230:three_prime_UTR 40.0%
AATTCCCAAACCACCATTGA+AGG - chr4_3:59948835-59948854 None:intergenic 40.0%
! AATGGTGGTTTGGGAATTGA+CGG + chr4_3:59948837-59948856 Msa0652230:three_prime_UTR 40.0%
CTGGTTAAGTAGTGAAGAGT+GGG + chr4_3:59948949-59948968 Msa0652230:three_prime_UTR 40.0%
TGGTTAAGTAGTGAAGAGTG+GGG + chr4_3:59948950-59948969 Msa0652230:three_prime_UTR 40.0%
GAAGTAGAAGCCATTGTTGT+TGG + chr4_3:59949006-59949025 Msa0652230:three_prime_UTR 40.0%
! AACGCAAGTTAAGTTGCGTA+GGG - chr4_3:59949178-59949197 None:intergenic 40.0%
! TAACGCAAGTTAAGTTGCGT+AGG - chr4_3:59949179-59949198 None:intergenic 40.0%
GTTGAAAAGCTGACCAAAGT+TGG - chr4_3:59949342-59949361 None:intergenic 40.0%
AAAATAGTGAGTAGCCGACT+TGG + chr4_3:59949578-59949597 Msa0652230:three_prime_UTR 40.0%
! AAATAGTGAGTAGCCGACTT+GGG + chr4_3:59949579-59949598 Msa0652230:three_prime_UTR 40.0%
AATAGTGAGCATCCTTCTTG+GGG - chr4_3:59949738-59949757 None:intergenic 40.0%
CGTTAACCGATGGAATCACA+AGG + chr4_3:59945327-59945346 Msa0652230:exon 45.0%
AACCTCGTTTCGCTTCGTAA+CGG - chr4_3:59945557-59945576 None:intergenic 45.0%
GGTTGCAAGAGTAGGATTCT+TGG + chr4_3:59945636-59945655 Msa0652230:CDS 45.0%
GCGAGTATTCCGAATTTACC+TGG + chr4_3:59945726-59945745 Msa0652230:CDS 45.0%
TGGCGGAGGTTGTGTTTATA+CGG + chr4_3:59945746-59945765 Msa0652230:CDS 45.0%
GGAGGTTGTGTTTATACGGT+TGG + chr4_3:59945750-59945769 Msa0652230:CDS 45.0%
GATTCCGTTGCAAAATGCAC+AGG + chr4_3:59945791-59945810 Msa0652230:CDS 45.0%
! TGCACCTGTGCATTTTGCAA+CGG - chr4_3:59945798-59945817 None:intergenic 45.0%
TTGCAAAATGCACAGGTGCA+GGG + chr4_3:59945798-59945817 Msa0652230:CDS 45.0%
TTCCAAACAAACTCCGGATC+AGG - chr4_3:59945942-59945961 None:intergenic 45.0%
CACGCATTCCAAACAAACTC+CGG - chr4_3:59945948-59945967 None:intergenic 45.0%
GGGTAACAAGCAACATCTGT+AGG + chr4_3:59946433-59946452 Msa0652230:intron 45.0%
!! CTCACTTGGTCTTGATGTGT+AGG + chr4_3:59947023-59947042 Msa0652230:intron 45.0%
!! CACTTGGTCTTGATGTGTAG+GGG + chr4_3:59947025-59947044 Msa0652230:intron 45.0%
TTGTTGCTCTTACAGCTCGT+AGG + chr4_3:59947094-59947113 Msa0652230:CDS 45.0%
TGACAGTCCTTTCCTGATTC+AGG - chr4_3:59947479-59947498 None:intergenic 45.0%
!! CACTTTGACCGGCTCTTTTA+GGG - chr4_3:59947639-59947658 None:intergenic 45.0%
!! ACACTTTGACCGGCTCTTTT+AGG - chr4_3:59947640-59947659 None:intergenic 45.0%
GAGGAACAATTCCTATCTGG+TGG + chr4_3:59947686-59947705 Msa0652230:CDS 45.0%
GGAACAATTCCTATCTGGTG+GGG + chr4_3:59947688-59947707 Msa0652230:CDS 45.0%
ATCAAATGGACCCGGGTATT+GGG - chr4_3:59947982-59948001 None:intergenic 45.0%
TATCAAATGGACCCGGGTAT+TGG - chr4_3:59947983-59948002 None:intergenic 45.0%
ATTGCTCCATGAAGACTTGG+AGG - chr4_3:59948278-59948297 None:intergenic 45.0%
AAGCGATCTGATGCAGTTAC+CGG + chr4_3:59948402-59948421 Msa0652230:CDS 45.0%
ATCCATGTCCTGATAAACCG+TGG + chr4_3:59948472-59948491 Msa0652230:CDS 45.0%
TTCCACGGTTTATCAGGACA+TGG - chr4_3:59948477-59948496 None:intergenic 45.0%
AGTCTCTTCCACGGTTTATC+AGG - chr4_3:59948483-59948502 None:intergenic 45.0%
ACCGTGGAAGAGACTTGATA+TGG + chr4_3:59948488-59948507 Msa0652230:CDS 45.0%
GCCATATCAAGTCTCTTCCA+CGG - chr4_3:59948492-59948511 None:intergenic 45.0%
AGGTCAGCTAGTTGAGATAC+AGG - chr4_3:59948549-59948568 None:intergenic 45.0%
! GCTGACCTTTTTCTACTTGC+TGG + chr4_3:59948561-59948580 Msa0652230:CDS 45.0%
CATTGCCGAAGATGTTACTC+AGG - chr4_3:59948806-59948825 None:intergenic 45.0%
GGCAATGTTGAGACCTTCAA+TGG + chr4_3:59948819-59948838 Msa0652230:three_prime_UTR 45.0%
TGAGACCTTCAATGGTGGTT+TGG + chr4_3:59948827-59948846 Msa0652230:three_prime_UTR 45.0%
GAGACCTTCAATGGTGGTTT+GGG + chr4_3:59948828-59948847 Msa0652230:three_prime_UTR 45.0%
AGATTCTGGTGGAGATGGAA+CGG + chr4_3:59948887-59948906 Msa0652230:three_prime_UTR 45.0%
GCTGGTTAAGTAGTGAAGAG+TGG + chr4_3:59948948-59948967 Msa0652230:three_prime_UTR 45.0%
GGTTAAGTAGTGAAGAGTGG+GGG + chr4_3:59948951-59948970 Msa0652230:three_prime_UTR 45.0%
GTGGTCTGAACCAACAACAA+TGG - chr4_3:59949019-59949038 None:intergenic 45.0%
! GACCACAGAGAAATTTTGGG+AGG + chr4_3:59949033-59949052 Msa0652230:three_prime_UTR 45.0%
CTCCTCCCAAAATTTCTCTG+TGG - chr4_3:59949038-59949057 None:intergenic 45.0%
GAACCTGCTCTTTACCCAAA+CGG + chr4_3:59949118-59949137 Msa0652230:three_prime_UTR 45.0%
!!! TAAGTTGCGTAGGGGCATTT+TGG - chr4_3:59949169-59949188 None:intergenic 45.0%
! ACGCAAGTTAAGTTGCGTAG+GGG - chr4_3:59949177-59949196 None:intergenic 45.0%
! TAACTTGCGCTAGTGCTAAG+TGG - chr4_3:59949282-59949301 None:intergenic 45.0%
GCAAGTTAACTCACGCTAGT+TGG + chr4_3:59949294-59949313 Msa0652230:three_prime_UTR 45.0%
GAGAATTAGAGGGAGAGAGT+GGG - chr4_3:59949494-59949513 None:intergenic 45.0%
AGAGAATTAGAGGGAGAGAG+TGG - chr4_3:59949495-59949514 None:intergenic 45.0%
!! AATAGTGAGTAGCCGACTTG+GGG + chr4_3:59949580-59949599 Msa0652230:three_prime_UTR 45.0%
! ACCGCAGAAACTTTTTACCG+TGG + chr4_3:59949644-59949663 Msa0652230:three_prime_UTR 45.0%
CCCACGGTAAAAAGTTTCTG+CGG - chr4_3:59949648-59949667 None:intergenic 45.0%
! CCGCAGAAACTTTTTACCGT+GGG + chr4_3:59949645-59949664 Msa0652230:three_prime_UTR 45.0%
!! GCCGATTTGAGAGCTGTTCT+TGG - chr4_3:59945275-59945294 None:intergenic 50.0%
CGTAAGCCTAAGCACACGAA+CGG + chr4_3:59945491-59945510 Msa0652230:CDS 50.0%
GTGTATCCGTTCGTGTGCTT+AGG - chr4_3:59945500-59945519 None:intergenic 50.0%
CTCTACGTAGATCCAACCAC+CGG + chr4_3:59945525-59945544 Msa0652230:CDS 50.0%
GTTACAAACGGATCGCGAAC+CGG + chr4_3:59945615-59945634 Msa0652230:CDS 50.0%
ATTCCGAATTTACCTGGCGG+AGG + chr4_3:59945732-59945751 Msa0652230:CDS 50.0%
CAACCTCCGCCAGGTAAATT+CGG - chr4_3:59945738-59945757 None:intergenic 50.0%
GTATAAACACAACCTCCGCC+AGG - chr4_3:59945747-59945766 None:intergenic 50.0%
GTTGCAAAATGCACAGGTGC+AGG + chr4_3:59945797-59945816 Msa0652230:CDS 50.0%
TGCAAAATGCACAGGTGCAG+GGG + chr4_3:59945799-59945818 Msa0652230:CDS 50.0%
TCGTCCGTTTCCGAGTAGAA+TGG + chr4_3:59945905-59945924 Msa0652230:CDS 50.0%
TCCGTTTCCGAGTAGAATGG+CGG + chr4_3:59945908-59945927 Msa0652230:CDS 50.0%
ACCGCCATTCTACTCGGAAA+CGG - chr4_3:59945912-59945931 None:intergenic 50.0%
! AGCCTGATCCGGAGTTTGTT+TGG + chr4_3:59945937-59945956 Msa0652230:CDS 50.0%
! CGGAGTTTGTTTGGAATGCG+TGG + chr4_3:59945946-59945965 Msa0652230:CDS 50.0%
CTCACAGATGGTTATGTCGG+TGG - chr4_3:59946511-59946530 None:intergenic 50.0%
GGAAGTTCAGGTCAGCTAGA+AGG + chr4_3:59947069-59947088 Msa0652230:CDS 50.0%
ACACCCTGGTACTCGATACT+TGG + chr4_3:59947125-59947144 Msa0652230:CDS 50.0%
!! TCGCCAAGTATCGAGTACCA+GGG - chr4_3:59947131-59947150 None:intergenic 50.0%
TGGTACTCGATACTTGGCGA+GGG + chr4_3:59947131-59947150 Msa0652230:CDS 50.0%
TGGAATGCGAGCAACTCGTA+TGG + chr4_3:59947611-59947630 Msa0652230:CDS 50.0%
GGAATGCGAGCAACTCGTAT+GGG + chr4_3:59947612-59947631 Msa0652230:CDS 50.0%
GTATGGGTCCCTAAAAGAGC+CGG + chr4_3:59947628-59947647 Msa0652230:CDS 50.0%
CGCCACACGTATGTGTTGAA+AGG - chr4_3:59947664-59947683 None:intergenic 50.0%
AACACATACGTGTGGCGAAG+AGG + chr4_3:59947667-59947686 Msa0652230:CDS 50.0%
! AACTTGCTTCGAAACGGGGA+AGG + chr4_3:59947886-59947905 Msa0652230:CDS 50.0%
! TCAAATGGACCCGGGTATTG+GGG - chr4_3:59947981-59948000 None:intergenic 50.0%
TGGTTGCCTCCAAGTCTTCA+TGG + chr4_3:59948269-59948288 Msa0652230:CDS 50.0%
ATGGAGCAATGTAGACGGCT+GGG + chr4_3:59948288-59948307 Msa0652230:CDS 50.0%
!! CTTGATAGCGATGGTGCACT+TGG + chr4_3:59948318-59948337 Msa0652230:CDS 50.0%
ACATGGATGCATCCATGTCG+TGG - chr4_3:59948460-59948479 None:intergenic 50.0%
GGTTTGGGAATTGACGGAGA+CGG + chr4_3:59948843-59948862 Msa0652230:three_prime_UTR 50.0%
TAGAACGGGGGAAGAGATTC+TGG + chr4_3:59948873-59948892 Msa0652230:three_prime_UTR 50.0%
GGAAGAGATTCTGGTGGAGA+TGG + chr4_3:59948882-59948901 Msa0652230:three_prime_UTR 50.0%
GATTCTGGTGGAGATGGAAC+GGG + chr4_3:59948888-59948907 Msa0652230:three_prime_UTR 50.0%
ATTCTGGTGGAGATGGAACG+GGG + chr4_3:59948889-59948908 Msa0652230:three_prime_UTR 50.0%
GATAGCGAATGGGAGTGATG+AGG + chr4_3:59948915-59948934 Msa0652230:three_prime_UTR 50.0%
GAACCGTTTGGGTAAAGAGC+AGG - chr4_3:59949124-59949143 None:intergenic 50.0%
GGGAATGAGCAGAACCGTTT+GGG - chr4_3:59949135-59949154 None:intergenic 50.0%
TGGGAATGAGCAGAACCGTT+TGG - chr4_3:59949136-59949155 None:intergenic 50.0%
GTTAACTCACGCTAGTTGGC+CGG + chr4_3:59949298-59949317 Msa0652230:three_prime_UTR 50.0%
GAGTGGGAGGAGATAATGTG+AGG - chr4_3:59949478-59949497 None:intergenic 50.0%
AATTAGAGGGAGAGAGTGGG+AGG - chr4_3:59949491-59949510 None:intergenic 50.0%
GGTCTATCACTTCCCCAAGT+CGG - chr4_3:59949595-59949614 None:intergenic 50.0%
TTGGGGAAGTGATAGACCGT+TGG + chr4_3:59949597-59949616 Msa0652230:three_prime_UTR 50.0%
TGGGGAAGTGATAGACCGTT+GGG + chr4_3:59949598-59949617 Msa0652230:three_prime_UTR 50.0%
TAACGGAGGATTCCGGTGGT+TGG - chr4_3:59945540-59945559 None:intergenic 55.0%
! TTCGTAACGGAGGATTCCGG+TGG - chr4_3:59945544-59945563 None:intergenic 55.0%
! CGCTTCGTAACGGAGGATTC+CGG - chr4_3:59945547-59945566 None:intergenic 55.0%
CTCGTTTCGCTTCGTAACGG+AGG - chr4_3:59945554-59945573 None:intergenic 55.0%
CTCCGTTACGAAGCGAAACG+AGG + chr4_3:59945552-59945571 Msa0652230:CDS 55.0%
ATACGGTTGGGGAGAGTCAG+TGG + chr4_3:59945763-59945782 Msa0652230:CDS 55.0%
AATGCACAGGTGCAGGGGAA+AGG + chr4_3:59945804-59945823 Msa0652230:CDS 55.0%
GGCGGTTAATCAGCCTGATC+CGG + chr4_3:59945926-59945945 Msa0652230:CDS 55.0%
CTCTTACAGCTCGTAGGAGC+AGG + chr4_3:59947100-59947119 Msa0652230:CDS 55.0%
!! CTCGCCAAGTATCGAGTACC+AGG - chr4_3:59947132-59947151 None:intergenic 55.0%
CTGGTACTCGATACTTGGCG+AGG + chr4_3:59947130-59947149 Msa0652230:CDS 55.0%
GGTACTCGATACTTGGCGAG+GGG + chr4_3:59947132-59947151 Msa0652230:CDS 55.0%
GTACTCGATACTTGGCGAGG+GGG + chr4_3:59947133-59947152 Msa0652230:CDS 55.0%
AGTTCTGCACCCCACCAGAT+AGG - chr4_3:59947700-59947719 None:intergenic 55.0%
CATGGAGCAATGTAGACGGC+TGG + chr4_3:59948287-59948306 Msa0652230:CDS 55.0%
TATACTGCTCCACTGCCACC+TGG + chr4_3:59948372-59948391 Msa0652230:CDS 55.0%
TCAGATCGCTTCTCCCATCC+AGG - chr4_3:59948393-59948412 None:intergenic 55.0%
GGAGACGGCCTTGCATAGAA+CGG + chr4_3:59948858-59948877 Msa0652230:three_prime_UTR 55.0%
GAGACGGCCTTGCATAGAAC+GGG + chr4_3:59948859-59948878 Msa0652230:three_prime_UTR 55.0%
AGACGGCCTTGCATAGAACG+GGG + chr4_3:59948860-59948879 Msa0652230:three_prime_UTR 55.0%
CTCTTCCCCCGTTCTATGCA+AGG - chr4_3:59948869-59948888 None:intergenic 55.0%
AACGGGGGAAGAGATTCTGG+TGG + chr4_3:59948876-59948895 Msa0652230:three_prime_UTR 55.0%
TTCTGGTGGAGATGGAACGG+GGG + chr4_3:59948890-59948909 Msa0652230:three_prime_UTR 55.0%
AACGGGGGGAGATAGCGAAT+GGG + chr4_3:59948905-59948924 Msa0652230:three_prime_UTR 55.0%
AGCGAATGGGAGTGATGAGG+TGG + chr4_3:59948918-59948937 Msa0652230:three_prime_UTR 55.0%
GAATGGGAGTGATGAGGTGG+AGG + chr4_3:59948921-59948940 Msa0652230:three_prime_UTR 55.0%
AGTAGTGAAGAGTGGGGGTG+CGG + chr4_3:59948956-59948975 Msa0652230:three_prime_UTR 55.0%
CGCGAACCGGTTGCAAGAGT+AGG + chr4_3:59945628-59945647 Msa0652230:CDS 60.0%
ACAGGTGCAGGGGAAAGGTG+AGG + chr4_3:59945809-59945828 Msa0652230:CDS 60.0%
CGTAGGAGCAGGTTACACCC+TGG + chr4_3:59947111-59947130 Msa0652230:CDS 60.0%
CTGGGAAGCTCCCCAATACC+CGG + chr4_3:59947968-59947987 Msa0652230:CDS 60.0%
TGGGAAGCTCCCCAATACCC+GGG + chr4_3:59947969-59947988 Msa0652230:CDS 60.0%
TGCTCCACTGCCACCTGGAT+GGG + chr4_3:59948377-59948396 Msa0652230:CDS 60.0%
TTCTCCCATCCAGGTGGCAG+TGG - chr4_3:59948384-59948403 None:intergenic 60.0%
GATCGCTTCTCCCATCCAGG+TGG - chr4_3:59948390-59948409 None:intergenic 60.0%
GACGGCCTTGCATAGAACGG+GGG + chr4_3:59948861-59948880 Msa0652230:three_prime_UTR 60.0%
TCTGGTGGAGATGGAACGGG+GGG + chr4_3:59948891-59948910 Msa0652230:three_prime_UTR 60.0%
GAACGGGGGGAGATAGCGAA+TGG + chr4_3:59948904-59948923 Msa0652230:three_prime_UTR 60.0%
GGAGTGATGAGGTGGAGGTG+CGG + chr4_3:59948926-59948945 Msa0652230:three_prime_UTR 60.0%
! GTAGTGAAGAGTGGGGGTGC+GGG + chr4_3:59948957-59948976 Msa0652230:three_prime_UTR 60.0%
CTGCTCCACTGCCACCTGGA+TGG + chr4_3:59948376-59948395 Msa0652230:CDS 65.0%
! TGATGAGGTGGAGGTGCGGC+TGG + chr4_3:59948930-59948949 Msa0652230:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 59945143 59949858 59945143 ID=Msa0652230;Name=Msa0652230
chr4_3 mRNA 59945143 59949858 59945143 ID=Msa0652230-mRNA-1;Parent=Msa0652230;Name=Msa0652230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=193|1|1|1|1|1|4|1091|635
chr4_3 exon 59945143 59945348 59945143 ID=Msa0652230-mRNA-1:exon:16168;Parent=Msa0652230-mRNA-1
chr4_3 exon 59945430 59946025 59945430 ID=Msa0652230-mRNA-1:exon:16169;Parent=Msa0652230-mRNA-1
chr4_3 exon 59947045 59947177 59947045 ID=Msa0652230-mRNA-1:exon:16170;Parent=Msa0652230-mRNA-1
chr4_3 exon 59947602 59949858 59947602 ID=Msa0652230-mRNA-1:exon:16171;Parent=Msa0652230-mRNA-1
chr4_3 five_prime_UTR 59945143 59945335 59945143 ID=Msa0652230-mRNA-1:five_prime_utr;Parent=Msa0652230-mRNA-1
chr4_3 CDS 59945336 59945348 59945336 ID=Msa0652230-mRNA-1:cds;Parent=Msa0652230-mRNA-1
chr4_3 CDS 59945430 59946025 59945430 ID=Msa0652230-mRNA-1:cds;Parent=Msa0652230-mRNA-1
chr4_3 CDS 59947045 59947177 59947045 ID=Msa0652230-mRNA-1:cds;Parent=Msa0652230-mRNA-1
chr4_3 CDS 59947602 59948767 59947602 ID=Msa0652230-mRNA-1:cds;Parent=Msa0652230-mRNA-1
chr4_3 three_prime_UTR 59948768 59949858 59948768 ID=Msa0652230-mRNA-1:three_prime_utr;Parent=Msa0652230-mRNA-1
Gene Sequence

>Msa0652230

ATGGAATCACAAGGTGGATTACGAGACACATCCGTTGTAGTCGTAACGCTAGATTCCGACGAAGTATACATAATCGTAAGCCTAAGCACACGAACGGATACACAAATTCTCTACGTAGATCCAACCACCGGAATCCTCCGTTACGAAGCGAAACGAGGTTTCGATCTATTCAATTCACAAAAAGAAGCTTACGAATTCGTTACAAACGGATCGCGAACCGGTTGCAAGAGTAGGATTCTTGGTAGAGCTATATTAGGTTACGCTGCTTTAGGAAATTTCGCTTTTCTTCTAATCGCAACGAGGTTGATTGCGAGTATTCCGAATTTACCTGGCGGAGGTTGTGTTTATACGGTTGGGGAGAGTCAGTGGATTAAGATTCCGTTGCAAAATGCACAGGTGCAGGGGAAAGGTGAGGTGAAGAATGTTATGGAGTTGTTAGAGCTTGACATTGATGGGAAGCATTATTTTTGTGAGACGAGGGATATTACTCGTCCGTTTCCGAGTAGAATGGCGGTTAATCAGCCTGATCCGGAGTTTGTTTGGAATGCGTGGTTTTCTACGCCGTTTGTTAATGTTGGATTGGCTACACATTGTGTTCATCTCTTGCAGGGGTTTGCAGAATGTCGAAGTTTTGGAAGTTCAGGTCAGCTAGAAGGTGTTGTTGCTCTTACAGCTCGTAGGAGCAGGTTACACCCTGGTACTCGATACTTGGCGAGGGGGCTAAATTCATGTTTCAGTACAGGAAATGAAGTGGAATGCGAGCAACTCGTATGGGTCCCTAAAAGAGCCGGTCAAAGTGTACCTTTCAACACATACGTGTGGCGAAGAGGAACAATTCCTATCTGGTGGGGTGCAGAACTGAAAATCACTGCTGCAGAAGCTGAAATTTATGTTTCAGACTGTGATCCGTATAAAGGAAGTGTGCAATATTATGAAAGACTGAGTAAGAGATACGATACTCGGAATCTAAATATACGAGCTGGCGAGACTTCAAATCGTAAAGCTTTGGTTCCTATAGTATGCATTAACTTGCTTCGAAACGGGGAAGGAAAGTCAGAGTGTATTTTGGTTCAGCATTTTGAAGAGTCTTTAAACTTTATTAGATCGACTGGGAAGCTCCCCAATACCCGGGTCCATTTGATAAATTATGACTGGCATGCCAGTGTAAAATTAAAAGGTGAACAACAAACAATTGAAGGGTTGTGGAGACTTCTAAAAGCACCCACTATATCCATAGGCATATCTGAAGGAGATTACTTGCCTTCACGACAACGGATAAATGATTGCAGAGGTGAAGTCATCTGCAATGATGATTTTGTAGGTGCATTCTGCTTAAGAACACATCAAAATGGGACTGTTCGTTTTAATTGTGCTGATTCTTTGGACAGGACCAATGCTGCTAGTTTTTTTGGTTGCCTCCAAGTCTTCATGGAGCAATGTAGACGGCTGGGAATATCACTTGATAGCGATGGTGCACTTGGTTATCATTCAATGAATAATAACTATGGTGGATATACTGCTCCACTGCCACCTGGATGGGAGAAGCGATCTGATGCAGTTACCGGAAAAACATATTTTATTGACCATAATACTAGAACCACGACATGGATGCATCCATGTCCTGATAAACCGTGGAAGAGACTTGATATGGCATTTGAGGAGTTTAAGAGATCAACAATTTTGTCTCCTGTATCTCAACTAGCTGACCTTTTTCTACTTGCTGGGGATATTCATGCAACTCTTTACACTGGGTCTAAAGCAATGCACAGCCAAATACTTAACATATTCAATGAAGATACAGGAAAGTTTAAACAGTTTTCGGCTGCACAGAATATGAAAATCACTCTGCAAAGAAGATACAAGAATGCAATTGTAGATAGCTCTCGTCAAAAGCAATTGAATGCTTAA
Protein sequence

>Msa0652230

MESQGGLRDTSVVVVTLDSDEVYIIVSLSTRTDTQILYVDPTTGILRYEAKRGFDLFNSQKEAYEFVTNGSRTGCKSRILGRAILGYAALGNFAFLLIATRLIASIPNLPGGGCVYTVGESQWIKIPLQNAQVQGKGEVKNVMELLELDIDGKHYFCETRDITRPFPSRMAVNQPDPEFVWNAWFSTPFVNVGLATHCVHLLQGFAECRSFGSSGQLEGVVALTARRSRLHPGTRYLARGLNSCFSTGNEVECEQLVWVPKRAGQSVPFNTYVWRRGTIPIWWGAELKITAAEAEIYVSDCDPYKGSVQYYERLSKRYDTRNLNIRAGETSNRKALVPIVCINLLRNGEGKSECILVQHFEESLNFIRSTGKLPNTRVHLINYDWHASVKLKGEQQTIEGLWRLLKAPTISIGISEGDYLPSRQRINDCRGEVICNDDFVGAFCLRTHQNGTVRFNCADSLDRTNAASFFGCLQVFMEQCRRLGISLDSDGALGYHSMNNNYGGYTAPLPPGWEKRSDAVTGKTYFIDHNTRTTTWMHPCPDKPWKRLDMAFEEFKRSTILSPVSQLADLFLLAGDIHATLYTGSKAMHSQILNIFNEDTGKFKQFSAAQNMKITLQRRYKNAIVDSSRQKQLNA*