AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0652220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652220 MtrunA17_Chr4g0045781 93.211 383 6 1 1 363 1 383 0.0 703
Msa0652220 MtrunA17_Chr4g0045721 77.259 343 55 2 41 363 25 364 0.0 529
Msa0652220 MtrunA17_Chr4g0045771 66.057 383 82 5 1 363 1 355 1.54e-175 491
Msa0652220 MtrunA17_Chr5g0394491 69.659 323 78 1 61 363 3 325 1.89e-144 412
Msa0652220 MtrunA17_Chr1g0205381 69.659 323 78 1 61 363 3 325 7.76e-144 410
Msa0652220 MtrunA17_Chr1g0191041 69.745 314 75 1 66 359 8 321 9.36e-139 397
Msa0652220 MtrunA17_Chr1g0191051 63.694 314 94 1 66 359 7 320 2.44e-131 378
Msa0652220 MtrunA17_Chr7g0254401 58.564 362 101 6 30 359 24 368 1.97e-128 372
Msa0652220 MtrunA17_Chr7g0248021 57.009 321 118 1 61 361 56 376 9.52e-126 366
Msa0652220 MtrunA17_Chr1g0191061 55.056 356 94 3 70 359 25 380 2.63e-112 332
Msa0652220 MtrunA17_Chr1g0191071 57.303 267 87 3 114 359 1 261 1.27e-81 249
Msa0652220 MtrunA17_Chr5g0446431 30.909 165 96 3 198 345 235 398 6.08e-17 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652220 AT2G43750.1 77.745 337 55 1 46 362 55 391 2.44e-175 493
Msa0652220 AT2G43750.2 77.745 337 55 1 46 362 55 391 2.44e-175 493
Msa0652220 AT3G59760.3 76.716 335 56 2 48 362 97 429 9.88e-173 488
Msa0652220 AT3G59760.1 76.716 335 56 2 48 362 97 429 1.76e-172 487
Msa0652220 AT3G59760.2 75.896 307 52 2 48 334 97 401 8.49e-153 437
Msa0652220 AT4G14880.5 66.246 317 87 1 66 362 5 321 7.64e-137 392
Msa0652220 AT4G14880.3 66.246 317 87 1 66 362 5 321 7.64e-137 392
Msa0652220 AT4G14880.4 66.246 317 87 1 66 362 5 321 7.64e-137 392
Msa0652220 AT4G14880.2 66.246 317 87 1 66 362 5 321 7.64e-137 392
Msa0652220 AT4G14880.1 66.246 317 87 1 66 362 5 321 7.64e-137 392
Msa0652220 AT3G04940.1 64.762 315 91 1 65 359 7 321 7.90e-131 377
Msa0652220 AT3G04940.2 64.762 315 91 1 65 359 7 321 7.90e-131 377
Msa0652220 AT5G28020.2 63.057 314 96 1 66 359 7 320 7.23e-125 362
Msa0652220 AT5G28020.4 63.057 314 96 1 66 359 7 320 7.23e-125 362
Msa0652220 AT5G28020.1 63.057 314 96 1 66 359 7 320 7.23e-125 362
Msa0652220 AT5G28020.3 63.057 314 96 1 66 359 7 320 7.23e-125 362
Msa0652220 AT5G28020.6 63.057 314 96 1 66 359 7 320 7.23e-125 362
Msa0652220 AT5G28030.1 62.776 317 98 1 66 362 7 323 5.62e-123 357
Msa0652220 AT5G28030.4 62.776 317 98 1 66 362 7 323 5.62e-123 357
Msa0652220 AT5G28030.5 62.776 317 98 1 66 362 7 323 5.62e-123 357
Msa0652220 AT5G28030.2 62.776 317 98 1 66 362 7 323 5.62e-123 357
Msa0652220 AT3G61440.1 51.862 349 147 2 33 361 17 364 4.87e-119 349
Msa0652220 AT3G03630.1 59.875 319 98 2 62 360 95 403 3.72e-116 343
Msa0652220 AT3G22460.1 59.630 270 69 2 114 363 1 250 7.98e-104 306
Msa0652220 AT3G61440.2 57.463 268 94 1 114 361 1 268 6.37e-101 299
Msa0652220 AT3G61440.4 49.832 297 128 2 33 309 17 312 1.86e-93 283
Msa0652220 AT5G28030.3 60.656 244 76 1 66 289 7 250 8.90e-92 276
Msa0652220 AT3G61440.3 56.198 242 86 1 140 361 2 243 1.74e-87 264
Msa0652220 AT3G22460.2 65.746 181 42 1 66 226 8 188 2.28e-79 241
Msa0652220 AT5G28020.5 59.402 234 75 1 146 359 1 234 1.78e-78 241
Msa0652220 AT1G55880.1 26.519 362 186 8 62 345 36 395 1.10e-27 113
Msa0652220 AT1G55880.2 27.419 248 118 4 62 248 36 282 5.62e-24 101

Find 118 sgRNAs with CRISPR-Local

Find 755 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGCTGCAGCTGCATTGC+AGG 0.091196 4_3:-59933226 Msa0652220:CDS
GGAACTGGTGGAACCATTTC+TGG 0.116462 4_3:-59935138 Msa0652220:CDS
TTCAGACCACAGAGAAATTT+TGG 0.146857 4_3:+59938357 None:intergenic
TGCTGCTAAGCTTGAGATTA+TGG 0.213789 4_3:-59937966 Msa0652220:CDS
CAAATTCTGCATAATGTTCT+TGG 0.214830 4_3:-59932597 Msa0652220:three_prime_UTR
TTCCGAATATCCTTGCATTT+TGG 0.225970 4_3:-59932674 Msa0652220:three_prime_UTR
CTCGAAAGCAACATACTTTC+AGG 0.252788 4_3:-59934853 Msa0652220:CDS
GAAAATGAGGGAAAGCTTAT+TGG 0.259838 4_3:-59933189 Msa0652220:CDS
AACCCTTTGCGATGCTATTC+AGG 0.263806 4_3:+59938002 None:intergenic
CTCACAAAATTCAGGGTATT+GGG 0.285360 4_3:-59934720 Msa0652220:CDS
AAAAGTCAATGAGTTGATTA+AGG 0.295418 4_3:+59938312 None:intergenic
AGGACTAATAGAAAAGAAAA+AGG 0.300088 4_3:-59942946 Msa0652220:five_prime_UTR
CACAGGACCTCACAAAATTC+AGG 0.311237 4_3:-59934728 Msa0652220:intron
AAAATGAGGGAAAGCTTATT+GGG 0.318994 4_3:-59933188 Msa0652220:CDS
AGACAACTGGGCCAGAGATA+TGG 0.320313 4_3:-59935203 Msa0652220:CDS
CACTTCTTCATCCAAATTCC+TGG 0.322667 4_3:+59934684 None:intergenic
AATGCCTGCTTCCATGAGTT+TGG 0.334639 4_3:-59936013 Msa0652220:CDS
GTATACACTTCAGAGTGTTT+TGG 0.338547 4_3:-59936112 Msa0652220:intron
ACCTTTAGAAGCTGCTATAA+AGG 0.347698 4_3:+59936053 None:intergenic
AATTACCTTCCCAGGTGTTA+TGG 0.349471 4_3:+59937549 None:intergenic
AAACGTGTAAAATTATTTCA+TGG 0.356549 4_3:+59932868 None:intergenic
CTCCAAAATGCAAGGATATT+CGG 0.359869 4_3:+59932672 None:intergenic
AAACAGGTGGGAATTTCTTC+AGG 0.360612 4_3:-59933252 Msa0652220:intron
GAGACCTTCAATGGTGGTTT+GGG 0.363427 4_3:+59938156 None:intergenic
CCTCACAAAATTCAGGGTAT+TGG 0.396380 4_3:-59934721 Msa0652220:CDS
AGCACTTCAGGAAGGCTTGC+TGG 0.399953 4_3:-59933860 Msa0652220:intron
GAGACGGCCTTGCATAGAAC+GGG 0.412259 4_3:+59938187 None:intergenic
ACTAGTGGGAACACAGGAAT+TGG 0.412669 4_3:-59936081 Msa0652220:CDS
TACAAAGCAAATAGCACTTC+AGG 0.414950 4_3:-59933872 Msa0652220:CDS
GAATCGACCGGTTCCAGAAA+TGG 0.416931 4_3:+59935125 None:intergenic
CAGGTTGTATTCCCAAGCTT+TGG 0.417755 4_3:-59932958 Msa0652220:CDS
TGAGACCTTCAATGGTGGTT+TGG 0.427764 4_3:+59938155 None:intergenic
GAAATTAGAAGCTTCTGAAC+TGG 0.429360 4_3:-59932747 Msa0652220:three_prime_UTR
GATTCTGGTGGAGATGGAAC+GGG 0.429833 4_3:+59938216 None:intergenic
GAAGTAGAAGCCATTGTTGT+TGG 0.431507 4_3:+59938334 None:intergenic
AAATATCTTTCACCAAAGCT+TGG 0.442789 4_3:+59932946 None:intergenic
GACAACTGGGCCAGAGATAT+GGG 0.443535 4_3:-59935202 Msa0652220:CDS
CTTGTATCTTCCCATATCTC+TGG 0.446743 4_3:+59935192 None:intergenic
AATATCTTTCACCAAAGCTT+GGG 0.452193 4_3:+59932947 None:intergenic
GCCTTTATAGCAGCTTCTAA+AGG 0.455275 4_3:-59936054 Msa0652220:CDS
TTAGTTGCAGGGATTGGAAC+TGG 0.459281 4_3:-59935153 Msa0652220:CDS
GGTGGAACCATTTCTGGAAC+CGG 0.466565 4_3:-59935132 Msa0652220:CDS
TTCGGAAACTGTATTGTTGA+AGG 0.468340 4_3:+59932690 None:intergenic
GGAAGAGATTCTGGTGGAGA+TGG 0.470662 4_3:+59938210 None:intergenic
TGATGAGGTGGAGGTGCGGC+TGG 0.475045 4_3:+59938258 None:intergenic
AACTCGTCTTTCCAAACTCA+TGG 0.475233 4_3:+59936002 None:intergenic
TTCTATTAGTCCTAAAATTG+TGG 0.476969 4_3:+59942956 None:intergenic
AATTCCCAAACCACCATTGA+AGG 0.477501 4_3:-59938160 Msa0652220:CDS
CAATCATCCACCATGCTGTA+AGG 0.479621 4_3:-59932823 Msa0652220:three_prime_UTR
AATGGTGGTTTGGGAATTGA+CGG 0.483524 4_3:+59938165 None:intergenic
ATTCCTGTGTTCCCACTAGT+AGG 0.495325 4_3:+59936084 None:intergenic
GTAAAATTATTTCATGGCTC+CGG 0.496021 4_3:+59932874 None:intergenic
GGCAATGTTGAGACCTTCAA+TGG 0.499106 4_3:+59938147 None:intergenic
TGCAAAGAGGCCTGAAAATG+AGG 0.501476 4_3:-59933202 Msa0652220:CDS
ATACTTTCAGGTGGAAAGCC+AGG 0.503845 4_3:-59934841 Msa0652220:intron
AAAATTCAGGGTATTGGGGC+TGG 0.504330 4_3:-59934715 Msa0652220:CDS
AGTTTCAATAGCTTCATCAC+TGG 0.506395 4_3:+59933894 None:intergenic
ATACTTGATGCTGAGAAGAA+AGG 0.512921 4_3:-59937574 Msa0652220:CDS
CTGGTTAAGTAGTGAAGAGT+GGG 0.513841 4_3:+59938277 None:intergenic
AGATTCTGGTGGAGATGGAA+CGG 0.518004 4_3:+59938215 None:intergenic
AGCGAATGGGAGTGATGAGG+TGG 0.523910 4_3:+59938246 None:intergenic
AGAATGTGAGAACATGCAAC+CGG 0.525916 4_3:-59932893 Msa0652220:CDS
ACAACAAAATTCAAAAGTAC+AGG 0.534751 4_3:-59935097 Msa0652220:intron
CTTTCCAAACTCATGGAAGC+AGG 0.537796 4_3:+59936009 None:intergenic
AAGAAAGGAGCCATAACACC+TGG 0.541723 4_3:-59937559 Msa0652220:CDS
GAGGCTGCGAAGGGTATGAA+TGG 0.541861 4_3:-59935943 Msa0652220:CDS
TACCTGAATAGCATCGCAAA+GGG 0.543542 4_3:-59938004 Msa0652220:CDS
AGTCCTAAAATTGTGGATTG+TGG 0.543908 4_3:+59942963 None:intergenic
TATCTCCACGAGAGGTCGAA+GGG 0.544535 4_3:+59943005 None:intergenic
ACTTCTTCATCCAAATTCCT+GGG 0.547488 4_3:+59934685 None:intergenic
ATTGCCCCTTCGACCTCTCG+TGG 0.548478 4_3:-59943010 Msa0652220:five_prime_UTR
CTTGTTGTAGTGTCAAAGAC+AGG 0.551242 4_3:-59937940 Msa0652220:intron
GGAGACGGCCTTGCATAGAA+CGG 0.552788 4_3:+59938186 None:intergenic
TCGGAAACTGTATTGTTGAA+GGG 0.561932 4_3:+59932691 None:intergenic
ACGAACCTGAGTAACATCTT+CGG 0.563992 4_3:+59938126 None:intergenic
ACAGGACCTCACAAAATTCA+GGG 0.564642 4_3:-59934727 Msa0652220:intron
CATTGCCGAAGATGTTACTC+AGG 0.579862 4_3:-59938131 Msa0652220:intron
CTGCATTGCAGGTTGCAAAG+AGG 0.579876 4_3:-59933215 Msa0652220:CDS
TACAGCATGGTGGATGATTG+TGG 0.582877 4_3:+59932826 None:intergenic
CATAGTCATGCCTTACAGCA+TGG 0.588487 4_3:+59932813 None:intergenic
AGGAGCCATAACACCTGGGA+AGG 0.589374 4_3:-59937554 Msa0652220:intron
ATGCTATTCAGGTAAACCAT+TGG 0.594308 4_3:+59938013 None:intergenic
GGAGATACTTATTGATATCG+TGG 0.594604 4_3:-59942989 Msa0652220:five_prime_UTR
TTAAACATGCCACTGATCAA+CGG 0.596731 4_3:-59932714 Msa0652220:three_prime_UTR
TCACAAAATTCAGGGTATTG+GGG 0.597332 4_3:-59934719 Msa0652220:CDS
ATTCTGGTGGAGATGGAACG+GGG 0.597352 4_3:+59938217 None:intergenic
GTTGAAGGGCCGTTGATCAG+TGG 0.599793 4_3:+59932705 None:intergenic
TTACCTGAATAGCATCGCAA+AGG 0.601649 4_3:-59938005 Msa0652220:CDS
GTATCTCCACGAGAGGTCGA+AGG 0.606111 4_3:+59943004 None:intergenic
GAAAGTATGTTGCTTTCGAG+AGG 0.608190 4_3:+59934856 None:intergenic
GCAAAGAGGCCTGAAAATGA+GGG 0.613832 4_3:-59933201 Msa0652220:CDS
GCTGGTTAAGTAGTGAAGAG+TGG 0.614564 4_3:+59938276 None:intergenic
GGTTTGGGAATTGACGGAGA+CGG 0.614847 4_3:+59938171 None:intergenic
TTCTGGTGGAGATGGAACGG+GGG 0.632481 4_3:+59938218 None:intergenic
AATGTTGAGACCTTCAATGG+TGG 0.632812 4_3:+59938150 None:intergenic
GTTGCAGGGATTGGAACTGG+TGG 0.633044 4_3:-59935150 Msa0652220:CDS
CTTAGCAGCAATATTAGCAA+CGG 0.634906 4_3:+59937979 None:intergenic
GAATGGGAGTGATGAGGTGG+AGG 0.648543 4_3:+59938249 None:intergenic
GGAGTGATGAGGTGGAGGTG+CGG 0.651486 4_3:+59938254 None:intergenic
GAAAGCAACATACTTTCAGG+TGG 0.653711 4_3:-59934850 Msa0652220:CDS
GATAGCGAATGGGAGTGATG+AGG 0.656827 4_3:+59938243 None:intergenic
GTGGTCTGAACCAACAACAA+TGG 0.657519 4_3:-59938344 Msa0652220:exon
TCTGGTGGAGATGGAACGGG+GGG 0.661253 4_3:+59938219 None:intergenic
AGAAAGGAGCCATAACACCT+GGG 0.664252 4_3:-59937558 Msa0652220:CDS
AAGCAAATAGCACTTCAGGA+AGG 0.667188 4_3:-59933868 Msa0652220:CDS
TCAATAAGTATCTCCACGAG+AGG 0.668078 4_3:+59942997 None:intergenic
CTCCTCCCAAAATTTCTCTG+TGG 0.669397 4_3:-59938363 Msa0652220:five_prime_UTR
ATCTCCACGAGAGGTCGAAG+GGG 0.670746 4_3:+59943006 None:intergenic
GAACCTACTAGTGGGAACAC+AGG 0.672376 4_3:-59936087 Msa0652220:CDS
CTGTCTTTGACACTACAACA+AGG 0.672530 4_3:+59937941 None:intergenic
AGACGGCCTTGCATAGAACG+GGG 0.674721 4_3:+59938188 None:intergenic
AGTGCTTGATGAAGTTATAG+CGG 0.676373 4_3:-59934665 Msa0652220:intron
AAATGAGGGAAAGCTTATTG+GGG 0.682298 4_3:-59933187 Msa0652220:intron
GAGATATGGGAAGATACAAG+AGG 0.685029 4_3:-59935189 Msa0652220:CDS
GACGGCCTTGCATAGAACGG+GGG 0.692045 4_3:+59938189 None:intergenic
TGGTTAAGTAGTGAAGAGTG+GGG 0.700929 4_3:+59938278 None:intergenic
GGTTAAGTAGTGAAGAGTGG+GGG 0.706478 4_3:+59938279 None:intergenic
AGTCATGCCTTACAGCATGG+TGG 0.719047 4_3:+59932816 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAGATTTTTTTAGATTTA+GGG - chr4_3:59933163-59933182 Msa0652220:intron 10.0%
!!! TTTTATTTCTTCTTTATATT+TGG - chr4_3:59933777-59933796 Msa0652220:intron 10.0%
!! GAATTAATAAATTCAAATAA+AGG + chr4_3:59934901-59934920 None:intergenic 10.0%
!! TAATGTTAACAAAATAATTT+CGG + chr4_3:59936223-59936242 None:intergenic 10.0%
!! CAAATATAAATAAAAGTAAA+TGG - chr4_3:59936282-59936301 Msa0652220:intron 10.0%
!! TAAATATAAATAAAAGCAAA+TGG - chr4_3:59936330-59936349 Msa0652220:intron 10.0%
!!! CATAAAAAAGAAATTTTTAA+TGG + chr4_3:59940672-59940691 None:intergenic 10.0%
!!! GATTAGATTTTTTTAGATTT+AGG - chr4_3:59933162-59933181 Msa0652220:intron 15.0%
!! TAGCCAAATAATATATTAAT+GGG + chr4_3:59933518-59933537 None:intergenic 15.0%
!!! CAAAAATTTAATCTTTTCAA+AGG + chr4_3:59934284-59934303 None:intergenic 15.0%
!!! GAAAAGATTAAATTTTTGTT+AGG - chr4_3:59934286-59934305 Msa0652220:intron 15.0%
!! AATTCTTATTACATTTACAA+TGG - chr4_3:59935043-59935062 Msa0652220:intron 15.0%
!! ATTCTTATTACATTTACAAT+GGG - chr4_3:59935044-59935063 Msa0652220:intron 15.0%
!!! TTTTTTTTTGGTTACATTTA+AGG - chr4_3:59935805-59935824 Msa0652220:intron 15.0%
!!! AAATGGACTAAATTAATAAA+AGG - chr4_3:59936299-59936318 Msa0652220:intron 15.0%
!! ACTAAATTAATAAAAGGAAA+TGG - chr4_3:59936305-59936324 Msa0652220:intron 15.0%
!!! TTTTTTTCAATATTCTCTTT+GGG + chr4_3:59936716-59936735 None:intergenic 15.0%
!!! TTTTTTTTCAATATTCTCTT+TGG + chr4_3:59936717-59936736 None:intergenic 15.0%
!! AATAAACTAAAAACAGTTTA+CGG + chr4_3:59937753-59937772 None:intergenic 15.0%
!!! TTTAAATTTTTAATGTCCTT+TGG - chr4_3:59938089-59938108 Msa0652220:intron 15.0%
!! AATCTGTGTATTATTTATAT+GGG + chr4_3:59939184-59939203 None:intergenic 15.0%
!! AAATCTGTGTATTATTTATA+TGG + chr4_3:59939185-59939204 None:intergenic 15.0%
!! TAACTAAGAATGATAAAAAA+GGG + chr4_3:59939426-59939445 None:intergenic 15.0%
!! TTAACTAAGAATGATAAAAA+AGG + chr4_3:59939427-59939446 None:intergenic 15.0%
!!! TGAAGTATAATTTAATTTCT+AGG - chr4_3:59940623-59940642 Msa0652220:intron 15.0%
!!! GAAGTATAATTTAATTTCTA+GGG - chr4_3:59940624-59940643 Msa0652220:intron 15.0%
!!! AAATTTCTTTTTTATGTATC+AGG - chr4_3:59940676-59940695 Msa0652220:intron 15.0%
!! AGAAAATAACAAATATGATA+GGG + chr4_3:59942183-59942202 None:intergenic 15.0%
!! TAGAAAATAACAAATATGAT+AGG + chr4_3:59942184-59942203 None:intergenic 15.0%
!!! TCATATTTGTTATTTTCTAT+TGG - chr4_3:59942185-59942204 Msa0652220:intron 15.0%
!!! TTTTATTTTTTTTTGTAACG+AGG + chr4_3:59942419-59942438 None:intergenic 15.0%
!! AATAAAAAAAATCTTATGGA+TGG - chr4_3:59942432-59942451 Msa0652220:intron 15.0%
!! TATGAAAATAACAGAATATA+AGG + chr4_3:59942484-59942503 None:intergenic 15.0%
!! TCTTAAGAGTAAAAAATATA+AGG + chr4_3:59942517-59942536 None:intergenic 15.0%
!! AATATCAAAAAAATGAGAAA+CGG + chr4_3:59942799-59942818 None:intergenic 15.0%
!!! CACTTAATCTAGAATTTTTT+AGG - chr4_3:59933010-59933029 Msa0652220:intron 20.0%
!!! TTTAGGGTTTGTTTAATTTT+TGG - chr4_3:59933179-59933198 Msa0652220:intron 20.0%
!!! ATGTTGTAGTTATCATTTTT+AGG - chr4_3:59933284-59933303 Msa0652220:intron 20.0%
!!! TGTTGTAGTTATCATTTTTA+GGG - chr4_3:59933285-59933304 Msa0652220:intron 20.0%
!! TACCCCATTAATATATTATT+TGG - chr4_3:59933512-59933531 Msa0652220:intron 20.0%
!! AGCCAAATAATATATTAATG+GGG + chr4_3:59933517-59933536 None:intergenic 20.0%
!! GTAGCCAAATAATATATTAA+TGG + chr4_3:59933519-59933538 None:intergenic 20.0%
!! TTTAAACCAACAAAATTGTT+TGG + chr4_3:59933543-59933562 None:intergenic 20.0%
!! AACTATCATTACATTACATT+CGG + chr4_3:59934628-59934647 None:intergenic 20.0%
!! TTCTTATTACATTTACAATG+GGG - chr4_3:59935045-59935064 Msa0652220:intron 20.0%
!!! TTTATTTTTAGTTTTACCAC+AGG + chr4_3:59935118-59935137 None:intergenic 20.0%
!!! TTTTTACACCAAAATAAAGA+AGG - chr4_3:59935272-59935291 Msa0652220:intron 20.0%
!!! CTTTTTTTCCTTCTTTATTT+TGG + chr4_3:59935283-59935302 None:intergenic 20.0%
!! AAGTTTATGAGTGTATTTAT+AGG - chr4_3:59935367-59935386 Msa0652220:intron 20.0%
!! AGTTTATGAGTGTATTTATA+GGG - chr4_3:59935368-59935387 Msa0652220:intron 20.0%
!! ATGTAACCAAAAAAAAATGA+AGG + chr4_3:59935802-59935821 None:intergenic 20.0%
!!! TTTTTTCAATATTCTCTTTG+GGG + chr4_3:59936715-59936734 None:intergenic 20.0%
!!! AATTTGTTTTTTATTGCTTC+TGG - chr4_3:59938039-59938058 Msa0652220:intron 20.0%
!! AAAGTAATTAACAATTCACA+CGG + chr4_3:59938250-59938269 None:intergenic 20.0%
!!! ACAATCATTTTTTCTTGTTA+CGG - chr4_3:59938303-59938322 Msa0652220:CDS 20.0%
!!! TAAGCAAAAAATGACTTTTT+AGG - chr4_3:59939805-59939824 Msa0652220:intron 20.0%
!! CATTGAATAATTAATGTATC+CGG - chr4_3:59939830-59939849 Msa0652220:intron 20.0%
!!! TAAGCAAAAAACAACTTTTT+AGG + chr4_3:59939894-59939913 None:intergenic 20.0%
!!! TTTGTTGTTGTTTTATGTTT+GGG + chr4_3:59940139-59940158 None:intergenic 20.0%
!!! TTTTGTTGTTGTTTTATGTT+TGG + chr4_3:59940140-59940159 None:intergenic 20.0%
!!! TAGTTTATTTTTCATTTGTG+TGG - chr4_3:59940198-59940217 Msa0652220:intron 20.0%
!!! AGTTTATTTTTCATTTGTGT+GGG - chr4_3:59940199-59940218 Msa0652220:intron 20.0%
!!! AAAATAGATATTTTAGTTGC+AGG - chr4_3:59940404-59940423 Msa0652220:intron 20.0%
!!! AAATAGATATTTTAGTTGCA+GGG - chr4_3:59940405-59940424 Msa0652220:intron 20.0%
!!! CTTTTGAATTTTGTTGTTTT+AGG + chr4_3:59940469-59940488 None:intergenic 20.0%
!!! TTTTAATATCAATTACGATG+AGG - chr4_3:59940533-59940552 Msa0652220:intron 20.0%
!!! TTTTTTATGTATCAGGTTAT+TGG - chr4_3:59940683-59940702 Msa0652220:intron 20.0%
!! AAAAATTATGATATTGGACT+TGG + chr4_3:59940776-59940795 None:intergenic 20.0%
!! AACATATTAAAGCATAATGA+AGG - chr4_3:59941853-59941872 Msa0652220:intron 20.0%
!! ACATATTAAAGCATAATGAA+GGG - chr4_3:59941854-59941873 Msa0652220:intron 20.0%
!! ACCATATTAGAACATTATTA+AGG - chr4_3:59941988-59942007 Msa0652220:intron 20.0%
!! CCATATTAGAACATTATTAA+GGG - chr4_3:59941989-59942008 Msa0652220:intron 20.0%
!! CTGCAATATATAAAAATTGT+GGG + chr4_3:59942594-59942613 None:intergenic 20.0%
!! AAACGTGTAAAATTATTTCA+TGG + chr4_3:59942704-59942723 None:intergenic 20.0%
!! ATATCAAAAAAATGAGAAAC+GGG + chr4_3:59942798-59942817 None:intergenic 20.0%
!!! ACTTTTTGATGTATTATGAA+TGG - chr4_3:59942926-59942945 Msa0652220:five_prime_UTR 20.0%
! TTCTATTAGTCCTAAAATTG+TGG + chr4_3:59932616-59932635 None:intergenic 25.0%
! AGGACTAATAGAAAAGAAAA+AGG - chr4_3:59932623-59932642 Msa0652220:three_prime_UTR 25.0%
!!! TGTGTTGTTTTATGAAAATG+AGG + chr4_3:59932865-59932884 None:intergenic 25.0%
!! AAAAGTATACAAATTATGCG+AGG + chr4_3:59933483-59933502 None:intergenic 25.0%
! ATTTGTCTTACCTATGAAAT+GGG - chr4_3:59934199-59934218 Msa0652220:intron 25.0%
! CAAGAAATTAACACTTAGAA+TGG + chr4_3:59934390-59934409 None:intergenic 25.0%
! TCTAAGTGTTAATTTCTTGT+TGG - chr4_3:59934391-59934410 Msa0652220:intron 25.0%
! ACCAACAAGAATTTAACATT+TGG - chr4_3:59934495-59934514 Msa0652220:intron 25.0%
! TCCAAATGTTAAATTCTTGT+TGG + chr4_3:59934499-59934518 None:intergenic 25.0%
! CAAGAATTTAACATTTGGAA+TGG - chr4_3:59934500-59934519 Msa0652220:intron 25.0%
! ATTTACGTTACATTACATTG+TGG + chr4_3:59934708-59934727 None:intergenic 25.0%
!!! ACATTTAGTTTTATCCAATG+TGG - chr4_3:59935179-59935198 Msa0652220:CDS 25.0%
! AGAAGGAAAAAAAGAAGAAA+AGG - chr4_3:59935289-59935308 Msa0652220:intron 25.0%
! GTTTATGAGTGTATTTATAG+GGG - chr4_3:59935369-59935388 Msa0652220:intron 25.0%
! TTTATGAGTGTATTTATAGG+GGG - chr4_3:59935370-59935389 Msa0652220:intron 25.0%
! AGGTTATATCTACCATAAAT+AGG - chr4_3:59935405-59935424 Msa0652220:intron 25.0%
! GGTTATATCTACCATAAATA+GGG - chr4_3:59935406-59935425 Msa0652220:intron 25.0%
!!! GTTTTTTTGACTTTGTTCAA+TGG + chr4_3:59935483-59935502 None:intergenic 25.0%
! TGTAAAACACAATAAAACCA+TGG + chr4_3:59935708-59935727 None:intergenic 25.0%
! TTGAAAATTGTTTAGTGCAT+AGG + chr4_3:59935774-59935793 None:intergenic 25.0%
!! GCACTAAACAATTTTCAATT+AGG - chr4_3:59935776-59935795 Msa0652220:intron 25.0%
!!! ATTAGGCCTTCATTTTTTTT+TGG - chr4_3:59935793-59935812 Msa0652220:intron 25.0%
!!! TCTACTTATTTTCTCCTTTT+TGG - chr4_3:59936453-59936472 Msa0652220:intron 25.0%
!!! CTACTTATTTTCTCCTTTTT+GGG - chr4_3:59936454-59936473 Msa0652220:intron 25.0%
!!! TACTTATTTTCTCCTTTTTG+GGG - chr4_3:59936455-59936474 Msa0652220:intron 25.0%
! TAAAAAGTAATCAATCTTCG+TGG - chr4_3:59936478-59936497 Msa0652220:intron 25.0%
! AAAAAGTAATCAATCTTCGT+GGG - chr4_3:59936479-59936498 Msa0652220:intron 25.0%
!! CAGATTTAAAATTATCCCAA+CGG - chr4_3:59936628-59936647 Msa0652220:intron 25.0%
! AAAGAAAGAAGAGAATTAGA+GGG - chr4_3:59936740-59936759 Msa0652220:intron 25.0%
!!! AAATATGTGAGGGTATTTAT+AGG - chr4_3:59936797-59936816 Msa0652220:intron 25.0%
! ATTTATGTTAGATACAACCT+AGG + chr4_3:59936835-59936854 None:intergenic 25.0%
!!! AAAAGTCAATGAGTTGATTA+AGG + chr4_3:59937260-59937279 None:intergenic 25.0%
!! TTTTCTTTTTCCTTTCAATC+TGG - chr4_3:59937667-59937686 Msa0652220:intron 25.0%
! ACGTTTATTGTTAGATTGTT+TGG - chr4_3:59937697-59937716 Msa0652220:intron 25.0%
! CGTTTATTGTTAGATTGTTT+GGG - chr4_3:59937698-59937717 Msa0652220:intron 25.0%
! CTCTTATATACAAACTTATG+TGG + chr4_3:59937905-59937924 None:intergenic 25.0%
! CACATAAGTTTGTATATAAG+AGG - chr4_3:59937903-59937922 Msa0652220:intron 25.0%
! AAGTAATTAACAATTCACAC+GGG + chr4_3:59938249-59938268 None:intergenic 25.0%
! TATTATAGGGAAGAAAAAGT+GGG - chr4_3:59938557-59938576 Msa0652220:intron 25.0%
! TAGAAACTACAACTTACTTT+AGG - chr4_3:59938649-59938668 Msa0652220:intron 25.0%
! TCTCTTATAATTGAATCACA+TGG + chr4_3:59939024-59939043 None:intergenic 25.0%
! TGATTCAATTATAAGAGAGA+AGG - chr4_3:59939026-59939045 Msa0652220:intron 25.0%
! AATTATAAGAGAGAAGGAAT+GGG - chr4_3:59939032-59939051 Msa0652220:intron 25.0%
!! TAATTCTTAGTGAGTTTGTT+AGG - chr4_3:59939075-59939094 Msa0652220:intron 25.0%
! GTGTATTATTTATATGGGAA+AGG + chr4_3:59939179-59939198 None:intergenic 25.0%
! AAAGAACAATGTAGACTTAA+TGG - chr4_3:59939325-59939344 Msa0652220:intron 25.0%
! AAGAACAATGTAGACTTAAT+GGG - chr4_3:59939326-59939345 Msa0652220:intron 25.0%
!!! ATTCTTAGTTAACTTGTTTC+TGG - chr4_3:59939435-59939454 Msa0652220:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr4_3:59939795-59939814 None:intergenic 25.0%
!! TTTTTGCTTATATATGTGAC+CGG - chr4_3:59939904-59939923 Msa0652220:intron 25.0%
!!! TTGTTGTTGTTTTATGTTTG+GGG + chr4_3:59940138-59940157 None:intergenic 25.0%
! TGAAAAATAAACTAGTGACT+TGG + chr4_3:59940192-59940211 None:intergenic 25.0%
!!! GTTTATTTTTCATTTGTGTG+GGG - chr4_3:59940200-59940219 Msa0652220:intron 25.0%
! ACAAATAAACTAAATGCCTA+AGG + chr4_3:59940236-59940255 None:intergenic 25.0%
!! ACAACAAAATTCAAAAGTAC+AGG - chr4_3:59940472-59940491 Msa0652220:intron 25.0%
!! GAAACTTATTATTTCTTACC+TGG + chr4_3:59940749-59940768 None:intergenic 25.0%
!! ATTTTTCATTAATGTGCTCT+AGG - chr4_3:59941308-59941327 Msa0652220:intron 25.0%
!! TTTTTCATTAATGTGCTCTA+GGG - chr4_3:59941309-59941328 Msa0652220:intron 25.0%
!! AGAAAATGCCAATATTTTCT+TGG - chr4_3:59941352-59941371 Msa0652220:intron 25.0%
! TTATTTGAGTAAGTGCATAT+CGG - chr4_3:59941443-59941462 Msa0652220:intron 25.0%
! CCCTTAATAATGTTCTAATA+TGG + chr4_3:59941992-59942011 None:intergenic 25.0%
! ATCAAATTGTATGGAATGTT+TGG + chr4_3:59942129-59942148 None:intergenic 25.0%
! AACAAATATGATAGGGATTT+GGG + chr4_3:59942176-59942195 None:intergenic 25.0%
! TAACAAATATGATAGGGATT+TGG + chr4_3:59942177-59942196 None:intergenic 25.0%
! AAAAAAATCTTATGGATGGA+TGG - chr4_3:59942436-59942455 Msa0652220:intron 25.0%
! GAAAATAACAGAATATAAGG+CGG + chr4_3:59942481-59942500 None:intergenic 25.0%
! CCTGCAATATATAAAAATTG+TGG + chr4_3:59942595-59942614 None:intergenic 25.0%
!! CCACAATTTTTATATATTGC+AGG - chr4_3:59942592-59942611 Msa0652220:intron 25.0%
!! GAAATAATTTTACACGTTTC+AGG - chr4_3:59942705-59942724 Msa0652220:intron 25.0%
! TGTTCTTGGTTCAAAAATAA+TGG - chr4_3:59942986-59943005 Msa0652220:five_prime_UTR 25.0%
!!! GTTGAAGGAATTTTGAAGTT+GGG + chr4_3:59932915-59932934 None:intergenic 30.0%
!!! AGTTGAAGGAATTTTGAAGT+TGG + chr4_3:59932916-59932935 None:intergenic 30.0%
!! GTTGTTTGATTTGAAGTTGA+AGG + chr4_3:59932930-59932949 None:intergenic 30.0%
CAAACATTTCATCAAACACT+TGG + chr4_3:59933330-59933349 None:intergenic 30.0%
! ATTGTGTAGATTTGAAGCAA+TGG - chr4_3:59933383-59933402 Msa0652220:intron 30.0%
!! CGAGGTTTATTTTTCTTTTG+GGG + chr4_3:59933465-59933484 None:intergenic 30.0%
!! GCGAGGTTTATTTTTCTTTT+GGG + chr4_3:59933466-59933485 None:intergenic 30.0%
!! TGCGAGGTTTATTTTTCTTT+TGG + chr4_3:59933467-59933486 None:intergenic 30.0%
TAGAAGATCGTCATTAGTTA+AGG - chr4_3:59934154-59934173 Msa0652220:intron 30.0%
CATTTGTCTTACCTATGAAA+TGG - chr4_3:59934198-59934217 Msa0652220:intron 30.0%
TTTGTCTTACCTATGAAATG+GGG - chr4_3:59934200-59934219 Msa0652220:intron 30.0%
TGTTGGATTCGTTTAAATGA+TGG - chr4_3:59934408-59934427 Msa0652220:intron 30.0%
! TGTTAAATTCTTGTTGGTCT+TGG + chr4_3:59934493-59934512 None:intergenic 30.0%
ATTCAAACTAGCTAAAAAGC+AGG + chr4_3:59934557-59934576 None:intergenic 30.0%
AATTATCTTACCACTGAATG+GGG + chr4_3:59934583-59934602 None:intergenic 30.0%
CAATTATCTTACCACTGAAT+GGG + chr4_3:59934584-59934603 None:intergenic 30.0%
ACAATTATCTTACCACTGAA+TGG + chr4_3:59934585-59934604 None:intergenic 30.0%
GGTAAGATAATTGTTGTAGT+TGG - chr4_3:59934591-59934610 Msa0652220:intron 30.0%
AGATAATTGTTGTAGTTGGA+AGG - chr4_3:59934595-59934614 Msa0652220:intron 30.0%
GAGAAAGAATGATAAGTAGT+GGG + chr4_3:59935252-59935271 None:intergenic 30.0%
AGAGAAAGAATGATAAGTAG+TGG + chr4_3:59935253-59935272 None:intergenic 30.0%
AGAAAAGGAAGAAGATTCAT+AGG - chr4_3:59935304-59935323 Msa0652220:intron 30.0%
GAAAAGGAAGAAGATTCATA+GGG - chr4_3:59935305-59935324 Msa0652220:intron 30.0%
AAAAGGAAGAAGATTCATAG+GGG - chr4_3:59935306-59935325 Msa0652220:intron 30.0%
!!! ACGTTTTTTGACCCTATTTA+TGG + chr4_3:59935420-59935439 None:intergenic 30.0%
!!! GATTACTTTTTACCCCAAAA+AGG + chr4_3:59936470-59936489 None:intergenic 30.0%
AAAAGTAATCAATCTTCGTG+GGG - chr4_3:59936480-59936499 Msa0652220:intron 30.0%
CCAGATTTAAATTTAGCCAA+GGG + chr4_3:59936547-59936566 None:intergenic 30.0%
ACCAGATTTAAATTTAGCCA+AGG + chr4_3:59936548-59936567 None:intergenic 30.0%
AAAAAGGGATCAAAATTCGT+CGG + chr4_3:59936691-59936710 None:intergenic 30.0%
!! TATTCTCTTTGGGGTAAAAA+GGG + chr4_3:59936706-59936725 None:intergenic 30.0%
!! ATATTCTCTTTGGGGTAAAA+AGG + chr4_3:59936707-59936726 None:intergenic 30.0%
CAAAGAAAGAAGAGAATTAG+AGG - chr4_3:59936739-59936758 Msa0652220:intron 30.0%
GGTTGTATCTAACATAAATG+TGG - chr4_3:59936836-59936855 Msa0652220:intron 30.0%
TGGTAAAAAAAACGTGTGAA+AGG - chr4_3:59936856-59936875 Msa0652220:intron 30.0%
GGTAAAAAAAACGTGTGAAA+GGG - chr4_3:59936857-59936876 Msa0652220:intron 30.0%
GTAAAAAAAACGTGTGAAAG+GGG - chr4_3:59936858-59936877 Msa0652220:intron 30.0%
! AACAAACGTTTTTCCAACTT+TGG + chr4_3:59936918-59936937 None:intergenic 30.0%
! GCATTTTGGACTTTTACTTT+GGG - chr4_3:59937089-59937108 Msa0652220:intron 30.0%
!!! GTTTTTTTCATAAGCTATCG+TGG + chr4_3:59937788-59937807 None:intergenic 30.0%
AAAAAACAAATTACCTTCCC+AGG + chr4_3:59938031-59938050 None:intergenic 30.0%
CACTATCTAATATCTACCAA+AGG + chr4_3:59938108-59938127 None:intergenic 30.0%
CTTAACACAGTTTCTGTATA+TGG - chr4_3:59938145-59938164 Msa0652220:CDS 30.0%
! AACCTATAATATGAAGGTGT+AGG + chr4_3:59938208-59938227 None:intergenic 30.0%
AGTAATTAACAATTCACACG+GGG + chr4_3:59938248-59938267 None:intergenic 30.0%
CTATTATAGGGAAGAAAAAG+TGG - chr4_3:59938556-59938575 Msa0652220:intron 30.0%
TAAATTGCTGTATTATCACC+TGG - chr4_3:59938598-59938617 Msa0652220:intron 30.0%
! ACAACTTACTTTAGGCATTT+TGG - chr4_3:59938657-59938676 Msa0652220:intron 30.0%
! AGGATTTTTACAACCACATT+GGG - chr4_3:59938870-59938889 Msa0652220:intron 30.0%
CAATTATAAGAGAGAAGGAA+TGG - chr4_3:59939031-59939050 Msa0652220:intron 30.0%
! CTTTTCTTGCAGATTAATTG+TGG - chr4_3:59939374-59939393 Msa0652220:intron 30.0%
!!! ATTTTTTCAATTACTCCCTC+CGG + chr4_3:59939926-59939945 None:intergenic 30.0%
! TAGGCTGATATGCTTTTATA+TGG + chr4_3:59940076-59940095 None:intergenic 30.0%
!!! TGTTGTTGTTTTATGTTTGG+GGG + chr4_3:59940137-59940156 None:intergenic 30.0%
! AACTGCAAATTTGGTTCATA+TGG - chr4_3:59940329-59940348 Msa0652220:intron 30.0%
! ACTGCAAATTTGGTTCATAT+GGG - chr4_3:59940330-59940349 Msa0652220:intron 30.0%
!!! AGATACATTTTGAGACAACT+GGG - chr4_3:59940354-59940373 Msa0652220:intron 30.0%
TACAGGTAAATCATTCTCAA+TGG - chr4_3:59940489-59940508 Msa0652220:intron 30.0%
TTGATATTAAAAGACACCCA+TGG + chr4_3:59940525-59940544 None:intergenic 30.0%
GGTAATATCTGCTAAATACT+TGG - chr4_3:59940554-59940573 Msa0652220:intron 30.0%
!! TGCTAAATACTTGGTGTAAA+TGG - chr4_3:59940563-59940582 Msa0652220:intron 30.0%
! ATTTTTAATGGAAACCGACA+AGG + chr4_3:59940660-59940679 None:intergenic 30.0%
GAAGATATTCTCTAATGTGT+GGG + chr4_3:59941067-59941086 None:intergenic 30.0%
AACTGAAATCTATGTCTTCA+TGG + chr4_3:59941117-59941136 None:intergenic 30.0%
! CATCGAAGTTTTCTAAATTC+TGG - chr4_3:59941221-59941240 Msa0652220:intron 30.0%
ACTGAAACTAACTTCAAATG+TGG + chr4_3:59941283-59941302 None:intergenic 30.0%
! TTGGCATTTTCTATTTATCC+TGG + chr4_3:59941344-59941363 None:intergenic 30.0%
AGTACAGACCAAGAAAATAT+TGG + chr4_3:59941363-59941382 None:intergenic 30.0%
AAGTCAGTTTAACTGATACA+AGG - chr4_3:59941588-59941607 Msa0652220:intron 30.0%
GCATTTAAAAAATGCAAGTC+AGG + chr4_3:59941768-59941787 None:intergenic 30.0%
TTGATATTATCCAAGCACTT+GGG - chr4_3:59941906-59941925 Msa0652220:intron 30.0%
GCATAAGAACTTTCATATCT+TGG - chr4_3:59942011-59942030 Msa0652220:intron 30.0%
GTTAATAAGTATCCAAGCAA+TGG - chr4_3:59942039-59942058 Msa0652220:intron 30.0%
AAATTGTATGGAATGTTTGG+TGG + chr4_3:59942126-59942145 None:intergenic 30.0%
ACAAATATGATAGGGATTTG+GGG + chr4_3:59942175-59942194 None:intergenic 30.0%
ACATAGGTGAAATCTTCATT+TGG + chr4_3:59942259-59942278 None:intergenic 30.0%
AATGAAGATTTCACCTATGT+TGG - chr4_3:59942259-59942278 Msa0652220:intron 30.0%
AAAATGAGGGAAAGCTTATT+GGG - chr4_3:59942381-59942400 Msa0652220:intron 30.0%
AATATCTTTCACCAAAGCTT+GGG + chr4_3:59942625-59942644 None:intergenic 30.0%
AAATATCTTTCACCAAAGCT+TGG + chr4_3:59942626-59942645 None:intergenic 30.0%
!! AATTTTCTGGAAAAGAACAG+TGG + chr4_3:59942651-59942670 None:intergenic 30.0%
GTAAAATTATTTCATGGCTC+CGG + chr4_3:59942698-59942717 None:intergenic 30.0%
CAAATTCTGCATAATGTTCT+TGG - chr4_3:59942972-59942991 Msa0652220:five_prime_UTR 30.0%
GGAGATACTTATTGATATCG+TGG - chr4_3:59932580-59932599 Msa0652220:three_prime_UTR 35.0%
! AGTCCACAATCCACAATTTT+AGG - chr4_3:59932603-59932622 Msa0652220:three_prime_UTR 35.0%
! AGTCCTAAAATTGTGGATTG+TGG + chr4_3:59932609-59932628 None:intergenic 35.0%
GAGAGTGAGTAAAACTGTTT+GGG + chr4_3:59932693-59932712 None:intergenic 35.0%
TGAGAGTGAGTAAAACTGTT+TGG + chr4_3:59932694-59932713 None:intergenic 35.0%
TATGAAAATGAGGCAGAATG+AGG + chr4_3:59932855-59932874 None:intergenic 35.0%
! GCTACTCCAAACAATTTTGT+TGG - chr4_3:59933534-59933553 Msa0652220:intron 35.0%
! AGCTAGCACAATTTTTACGA+GGG + chr4_3:59933805-59933824 None:intergenic 35.0%
! AAGCTAGCACAATTTTTACG+AGG + chr4_3:59933806-59933825 None:intergenic 35.0%
GACGTTCATGCAAAATTCAA+CGG - chr4_3:59933838-59933857 Msa0652220:intron 35.0%
CAACTGAATGAATTCTACCA+AGG - chr4_3:59933922-59933941 Msa0652220:intron 35.0%
AACTAATGACGATCTTCTAG+CGG + chr4_3:59934153-59934172 None:intergenic 35.0%
GATCGTCATTAGTTAAGGTA+AGG - chr4_3:59934159-59934178 Msa0652220:intron 35.0%
TTTGAATCACCCCATTTCAT+AGG + chr4_3:59934212-59934231 None:intergenic 35.0%
! GATGATGGTATTAAGTGTCA+AGG - chr4_3:59934317-59934336 Msa0652220:intron 35.0%
TGGTATTAAGTGTCAAGGAA+TGG - chr4_3:59934322-59934341 Msa0652220:intron 35.0%
TGATAGTATCTAAGTGCCAA+CGG + chr4_3:59934463-59934482 None:intergenic 35.0%
!! TAGTTTTACCACAGGAAGAT+AGG + chr4_3:59935110-59935129 None:intergenic 35.0%
ACAAGAAAACCAACCTTACT+GGG - chr4_3:59935140-59935159 Msa0652220:CDS 35.0%
!!! GATTTAGTTTTACCCCAGTA+AGG + chr4_3:59935156-59935175 None:intergenic 35.0%
AAAGGAAGAAGATTCATAGG+GGG - chr4_3:59935307-59935326 Msa0652220:intron 35.0%
CAACTCAAGAACATGTTTGT+TGG - chr4_3:59935663-59935682 Msa0652220:intron 35.0%
! AGAACATGTTTGTTGGACTT+TGG - chr4_3:59935670-59935689 Msa0652220:intron 35.0%
AAAATAGTGAGCATCCTTCT+TGG - chr4_3:59936504-59936523 Msa0652220:intron 35.0%
AAATAGTGAGCATCCTTCTT+GGG - chr4_3:59936505-59936524 Msa0652220:intron 35.0%
! ATGATGTATTTTCCCCAAGA+AGG + chr4_3:59936521-59936540 None:intergenic 35.0%
GAAAATACATCATCAACCCT+TGG - chr4_3:59936528-59936547 Msa0652220:intron 35.0%
CCCTTGGCTAAATTTAAATC+TGG - chr4_3:59936544-59936563 Msa0652220:intron 35.0%
TGGGTAAAAAGAACTTCTTG+TGG + chr4_3:59936580-59936599 None:intergenic 35.0%
! CAAGAAGTTCTTTTTACCCA+CGG - chr4_3:59936580-59936599 Msa0652220:intron 35.0%
AAAAGGGATCAAAATTCGTC+GGG + chr4_3:59936690-59936709 None:intergenic 35.0%
AGGAGATAATGTGAGGAATA+TGG - chr4_3:59936773-59936792 Msa0652220:intron 35.0%
GGAGATAATGTGAGGAATAT+GGG - chr4_3:59936774-59936793 Msa0652220:intron 35.0%
AGGAATATGGGAAATATGTG+AGG - chr4_3:59936786-59936805 Msa0652220:intron 35.0%
GGAATATGGGAAATATGTGA+GGG - chr4_3:59936787-59936806 Msa0652220:intron 35.0%
ATAGGTAGAAATGTGAACCT+AGG - chr4_3:59936815-59936834 Msa0652220:intron 35.0%
GAAAAACGTTTGTTCTTCAC+CGG - chr4_3:59936924-59936943 Msa0652220:intron 35.0%
! GGCATTTTGGACTTTTACTT+TGG - chr4_3:59937088-59937107 Msa0652220:intron 35.0%
ATCAAAGAATAGTCACAGCT+CGG + chr4_3:59937148-59937167 None:intergenic 35.0%
! TCAGACCACAGAGAAATTTT+GGG + chr4_3:59937214-59937233 None:intergenic 35.0%
! TTCAGACCACAGAGAAATTT+TGG + chr4_3:59937215-59937234 None:intergenic 35.0%
ATGAGCTGCAGCAAAAAAAA+TGG + chr4_3:59937526-59937545 None:intergenic 35.0%
!!! TTTTTTTTGCTGCAGCTCAT+AGG - chr4_3:59937526-59937545 Msa0652220:intron 35.0%
ATGCTATTCAGGTAAACCAT+TGG + chr4_3:59937559-59937578 None:intergenic 35.0%
CTTAGCAGCAATATTAGCAA+CGG + chr4_3:59937593-59937612 None:intergenic 35.0%
CGTAGAATAACCAGATTGAA+AGG + chr4_3:59937680-59937699 None:intergenic 35.0%
TCAAGCTGTTTATCCAAACA+GGG - chr4_3:59937866-59937885 Msa0652220:intron 35.0%
! TGTTTATCCAAACAGGGTTT+TGG - chr4_3:59937872-59937891 Msa0652220:intron 35.0%
ACATATACCAAAACCCTGTT+TGG + chr4_3:59937882-59937901 None:intergenic 35.0%
!!! CTTTTGATTTGTTCTCTTGC+AGG - chr4_3:59937957-59937976 Msa0652220:CDS 35.0%
ATACTTGATGCTGAGAAGAA+AGG - chr4_3:59937995-59938014 Msa0652220:CDS 35.0%
ACTGGGAACCTATAATATGA+AGG + chr4_3:59938214-59938233 None:intergenic 35.0%
!! ATAAGGAATTTTAGCGTTGC+AGG - chr4_3:59938493-59938512 Msa0652220:intron 35.0%
GATAGAATGTGTTAGTTGGT+GGG - chr4_3:59938810-59938829 Msa0652220:intron 35.0%
! ATAGAATGTGTTAGTTGGTG+GGG - chr4_3:59938811-59938830 Msa0652220:intron 35.0%
! ATAGAATGTGTTAGTTGGTG+AGG - chr4_3:59938811-59938830 Msa0652220:intron 35.0%
! GAGGATTTTTACAACCACAT+TGG - chr4_3:59938869-59938888 Msa0652220:intron 35.0%
AGAGAATATCTCTCTTGTAC+TGG - chr4_3:59939098-59939117 Msa0652220:intron 35.0%
! AATATCTCTCTTGTACTGGT+AGG - chr4_3:59939102-59939121 Msa0652220:intron 35.0%
TCTATCACACTCTTTGCTTT+AGG - chr4_3:59939224-59939243 Msa0652220:intron 35.0%
ATCTATGTGTGCGCATTATA+TGG - chr4_3:59939292-59939311 Msa0652220:intron 35.0%
! TGCGCATTATATGGTTCTTT+TGG - chr4_3:59939301-59939320 Msa0652220:intron 35.0%
!! GTATACACTTCAGAGTGTTT+TGG - chr4_3:59939457-59939476 Msa0652220:intron 35.0%
! ACCTTTAGAAGCTGCTATAA+AGG + chr4_3:59939519-59939538 None:intergenic 35.0%
!!! CGAGTTCTTTTGAAAGCATT+TGG - chr4_3:59939584-59939603 Msa0652220:intron 35.0%
! TAGATGTTGCCATTTACCTT+GGG + chr4_3:59939731-59939750 None:intergenic 35.0%
! TTAGATGTTGCCATTTACCT+TGG + chr4_3:59939732-59939751 None:intergenic 35.0%
AATGTATCCGGTCACATTTA+TGG - chr4_3:59939842-59939861 Msa0652220:intron 35.0%
ATGTATCCGGTCACATTTAT+GGG - chr4_3:59939843-59939862 Msa0652220:intron 35.0%
ATCTAACCCATAAATGTGAC+CGG + chr4_3:59939852-59939871 None:intergenic 35.0%
! TTTTATATGGTGCCTTTAGC+AGG + chr4_3:59940063-59940082 None:intergenic 35.0%
!! ACTAGTGACTTGGTATGTTT+GGG + chr4_3:59940182-59940201 None:intergenic 35.0%
!! AACTAGTGACTTGGTATGTT+TGG + chr4_3:59940183-59940202 None:intergenic 35.0%
TGAACTCAACTGAATGCAAA+GGG + chr4_3:59940264-59940283 None:intergenic 35.0%
TTGAACTCAACTGAATGCAA+AGG + chr4_3:59940265-59940284 None:intergenic 35.0%
TTCAGTTGAGTTCAAGATGA+TGG - chr4_3:59940270-59940289 Msa0652220:intron 35.0%
ATAGAGTTCTACTTCTAACG+TGG - chr4_3:59940304-59940323 Msa0652220:intron 35.0%
!!! CAGATACATTTTGAGACAAC+TGG - chr4_3:59940353-59940372 Msa0652220:intron 35.0%
!!! GATATTTTAGTTGCAGGGAT+TGG - chr4_3:59940410-59940429 Msa0652220:intron 35.0%
!!! TTGTTGTTTTAGGAATCGAC+CGG + chr4_3:59940459-59940478 None:intergenic 35.0%
GATCTTTGTACTCCATATAC+TGG - chr4_3:59940585-59940604 Msa0652220:intron 35.0%
GATAAGACATGACCAGTATA+TGG + chr4_3:59940600-59940619 None:intergenic 35.0%
! CTCACAAAATTCAGGGTATT+GGG - chr4_3:59940849-59940868 Msa0652220:intron 35.0%
!! TCACAAAATTCAGGGTATTG+GGG - chr4_3:59940850-59940869 Msa0652220:intron 35.0%
ACTTCTTCATCCAAATTCCT+GGG + chr4_3:59940887-59940906 None:intergenic 35.0%
AGTGCTTGATGAAGTTATAG+CGG - chr4_3:59940904-59940923 Msa0652220:intron 35.0%
GGAAGATATTCTCTAATGTG+TGG + chr4_3:59941068-59941087 None:intergenic 35.0%
ATATCTTCCGTTGACAAGAA+TGG - chr4_3:59941079-59941098 Msa0652220:intron 35.0%
GCAATGCTTATAGAGGTAAA+AGG + chr4_3:59941147-59941166 None:intergenic 35.0%
AACAAGATAGTGTGTATGTG+CGG + chr4_3:59941179-59941198 None:intergenic 35.0%
! TACTTGTTAGAACTCAACAG+AGG - chr4_3:59941379-59941398 Msa0652220:intron 35.0%
! ACTTGTTAGAACTCAACAGA+GGG - chr4_3:59941380-59941399 Msa0652220:intron 35.0%
CTTATTGTACTCGAGTTAGT+TGG + chr4_3:59941515-59941534 None:intergenic 35.0%
ATATCTGCCAAATCAAGACA+GGG + chr4_3:59941655-59941674 None:intergenic 35.0%
AGTTTCAATAGCTTCATCAC+TGG + chr4_3:59941678-59941697 None:intergenic 35.0%
TACAAAGCAAATAGCACTTC+AGG - chr4_3:59941697-59941716 Msa0652220:intron 35.0%
AAAAATGCAAGTCAGGCAAA+TGG + chr4_3:59941761-59941780 None:intergenic 35.0%
GTTGATATTATCCAAGCACT+TGG - chr4_3:59941905-59941924 Msa0652220:intron 35.0%
TGATATTATCCAAGCACTTG+GGG - chr4_3:59941907-59941926 Msa0652220:intron 35.0%
! ATTGTTACGCGCTACTTTAA+GGG + chr4_3:59941948-59941967 None:intergenic 35.0%
! TGTTTGGTGGAGTATTTAAC+TGG + chr4_3:59942113-59942132 None:intergenic 35.0%
CATTCCATACAATTTGATGC+AGG - chr4_3:59942131-59942150 Msa0652220:intron 35.0%
AAGTCCTGCATCAAATTGTA+TGG + chr4_3:59942138-59942157 None:intergenic 35.0%
TCAGAGTATAAAGCCAACAT+AGG + chr4_3:59942275-59942294 None:intergenic 35.0%
TTTCCAATGGTATGAAGGTA+AGG + chr4_3:59942299-59942318 None:intergenic 35.0%
! ATAAGCTTTCCCTCATTTTC+AGG + chr4_3:59942380-59942399 None:intergenic 35.0%
GAAAATGAGGGAAAGCTTAT+TGG - chr4_3:59942380-59942399 Msa0652220:intron 35.0%
AAATGAGGGAAAGCTTATTG+GGG - chr4_3:59942382-59942401 Msa0652220:intron 35.0%
! CACATTCTTCTCGAATTTTC+TGG + chr4_3:59942664-59942683 None:intergenic 35.0%
GAAATTAGAAGCTTCTGAAC+TGG - chr4_3:59942822-59942841 Msa0652220:intron 35.0%
TTAAACATGCCACTGATCAA+CGG - chr4_3:59942855-59942874 Msa0652220:intron 35.0%
TCGGAAACTGTATTGTTGAA+GGG + chr4_3:59942881-59942900 None:intergenic 35.0%
TTCGGAAACTGTATTGTTGA+AGG + chr4_3:59942882-59942901 None:intergenic 35.0%
! TTCCGAATATCCTTGCATTT+TGG - chr4_3:59942895-59942914 Msa0652220:intron 35.0%
CTCCAAAATGCAAGGATATT+CGG + chr4_3:59942900-59942919 None:intergenic 35.0%
! GAATATCCTTGCATTTTGGA+GGG - chr4_3:59942899-59942918 Msa0652220:intron 35.0%
TCAATAAGTATCTCCACGAG+AGG + chr4_3:59932575-59932594 None:intergenic 40.0%
AAACTGTTTGGGTAAAGAGC+AGG + chr4_3:59932682-59932701 None:intergenic 40.0%
AACGCATGTTAACATGCGTA+GGG + chr4_3:59932736-59932755 None:intergenic 40.0%
TAACGCATGTTAACATGCGT+AGG + chr4_3:59932737-59932756 None:intergenic 40.0%
CATGTTAACATGCGTTACGT+AGG - chr4_3:59932740-59932759 Msa0652220:three_prime_UTR 40.0%
CTACGTGATGTTATTAACCG+AGG - chr4_3:59932824-59932843 Msa0652220:three_prime_UTR 40.0%
! TGTAGATTTGAAGCAATGGC+CGG - chr4_3:59933387-59933406 Msa0652220:intron 40.0%
GTGAATCCTTTCATAGCAGT+GGG - chr4_3:59933426-59933445 Msa0652220:intron 40.0%
TGAATCCTTTCATAGCAGTG+GGG - chr4_3:59933427-59933446 Msa0652220:intron 40.0%
! CTAGCACAATTTTTACGAGG+GGG + chr4_3:59933803-59933822 None:intergenic 40.0%
! GCTAGCACAATTTTTACGAG+GGG + chr4_3:59933804-59933823 None:intergenic 40.0%
GTTCATGCAAAATTCAACGG+CGG - chr4_3:59933841-59933860 Msa0652220:intron 40.0%
AAACTCAGAGGTTGAAGGTT+CGG - chr4_3:59933866-59933885 Msa0652220:CDS 40.0%
TGCCTTGATGTAACGTTAAG+AGG - chr4_3:59933889-59933908 Msa0652220:CDS 40.0%
GACCTCTTAACGTTACATCA+AGG + chr4_3:59933894-59933913 None:intergenic 40.0%
TGTAACGTTAAGAGGTCTCA+AGG - chr4_3:59933897-59933916 Msa0652220:CDS 40.0%
AGGGGAACATATCATTCACT+TGG - chr4_3:59934007-59934026 Msa0652220:intron 40.0%
GGGGAACATATCATTCACTT+GGG - chr4_3:59934008-59934027 Msa0652220:intron 40.0%
GAACATATCATTCACTTGGG+TGG - chr4_3:59934011-59934030 Msa0652220:intron 40.0%
! AAAACGTGACGAGCATGTTT+TGG - chr4_3:59934049-59934068 Msa0652220:intron 40.0%
! AAACGTGACGAGCATGTTTT+GGG - chr4_3:59934050-59934069 Msa0652220:intron 40.0%
GGTGATTCAAACTTGCCAAA+CGG - chr4_3:59934221-59934240 Msa0652220:intron 40.0%
! TGTTAGGCTTGCTTAGATGA+TGG - chr4_3:59934302-59934321 Msa0652220:intron 40.0%
GAATGGAACAAAAACACTCC+CGG + chr4_3:59934373-59934392 None:intergenic 40.0%
! ATGATGGTATCGAAGTGTCA+AGG - chr4_3:59934424-59934443 Msa0652220:intron 40.0%
TTTGAATTGACCCCATTCAG+TGG - chr4_3:59934570-59934589 Msa0652220:intron 40.0%
!!! CAGTAAGGTTGGTTTTCTTG+TGG + chr4_3:59935141-59935160 None:intergenic 40.0%
CACAAGAAAACCAACCTTAC+TGG - chr4_3:59935139-59935158 Msa0652220:CDS 40.0%
CAAGAAAACCAACCTTACTG+GGG - chr4_3:59935141-59935160 Msa0652220:CDS 40.0%
!! TAGTTTTACCCCAGTAAGGT+TGG + chr4_3:59935152-59935171 None:intergenic 40.0%
TCTTGGGCAAAAAACCACAT+TGG + chr4_3:59935196-59935215 None:intergenic 40.0%
AAGTAGTGAGCAGCTTTCTT+GGG + chr4_3:59935212-59935231 None:intergenic 40.0%
TAAGTAGTGAGCAGCTTTCT+TGG + chr4_3:59935213-59935232 None:intergenic 40.0%
!! TGATAAGTAGTGGGTATGCT+GGG + chr4_3:59935243-59935262 None:intergenic 40.0%
!! ATGATAAGTAGTGGGTATGC+TGG + chr4_3:59935244-59935263 None:intergenic 40.0%
ATAGGGGGAGATTGTAACAT+AGG - chr4_3:59935385-59935404 Msa0652220:intron 40.0%
ACTCACGCTAGTGTAAATTC+TGG + chr4_3:59935518-59935537 None:intergenic 40.0%
TGAGTTAACTCACGCTAGTT+AGG - chr4_3:59935630-59935649 Msa0652220:intron 40.0%
! CATGTTTGTTGGACTTTGGT+CGG - chr4_3:59935674-59935693 Msa0652220:intron 40.0%
TTTGGTCGGTTATTCAACCA+TGG - chr4_3:59935688-59935707 Msa0652220:intron 40.0%
AATAGTGAGCATCCTTCTTG+GGG - chr4_3:59936506-59936525 Msa0652220:intron 40.0%
! AAATAGTGAGTAGCCGACTT+GGG + chr4_3:59936665-59936684 None:intergenic 40.0%
AAAATAGTGAGTAGCCGACT+TGG + chr4_3:59936666-59936685 None:intergenic 40.0%
GTTGAAAAGCTGACCAAAGT+TGG - chr4_3:59936902-59936921 Msa0652220:intron 40.0%
! TAACGCAAGTTAAGTTGCGT+AGG - chr4_3:59937065-59937084 Msa0652220:intron 40.0%
! AACGCAAGTTAAGTTGCGTA+GGG - chr4_3:59937066-59937085 Msa0652220:intron 40.0%
GAAGTAGAAGCCATTGTTGT+TGG + chr4_3:59937238-59937257 None:intergenic 40.0%
TGGTTAAGTAGTGAAGAGTG+GGG + chr4_3:59937294-59937313 None:intergenic 40.0%
CTGGTTAAGTAGTGAAGAGT+GGG + chr4_3:59937295-59937314 None:intergenic 40.0%
! AATGGTGGTTTGGGAATTGA+CGG + chr4_3:59937407-59937426 None:intergenic 40.0%
AATTCCCAAACCACCATTGA+AGG - chr4_3:59937409-59937428 Msa0652220:intron 40.0%
AATGTTGAGACCTTCAATGG+TGG + chr4_3:59937422-59937441 None:intergenic 40.0%
ACGAACCTGAGTAACATCTT+CGG + chr4_3:59937446-59937465 None:intergenic 40.0%
GCTCATAGGAAAAACACCAA+TGG - chr4_3:59937540-59937559 Msa0652220:intron 40.0%
TTACCTGAATAGCATCGCAA+AGG - chr4_3:59937564-59937583 Msa0652220:CDS 40.0%
TACCTGAATAGCATCGCAAA+GGG - chr4_3:59937565-59937584 Msa0652220:CDS 40.0%
TGCTGCTAAGCTTGAGATTA+TGG - chr4_3:59937603-59937622 Msa0652220:intron 40.0%
CTGTCTTTGACACTACAACA+AGG + chr4_3:59937631-59937650 None:intergenic 40.0%
! CTTGTTGTAGTGTCAAAGAC+AGG - chr4_3:59937629-59937648 Msa0652220:intron 40.0%
AGCGCATATGGAAACAACTT+AGG - chr4_3:59937721-59937740 Msa0652220:intron 40.0%
! AAGCTATCGTGGAAAGCATA+AGG + chr4_3:59937777-59937796 None:intergenic 40.0%
GTCAAGCTGTTTATCCAAAC+AGG - chr4_3:59937865-59937884 Msa0652220:intron 40.0%
! GATTTGTTCTCTTGCAGGAT+AGG - chr4_3:59937962-59937981 Msa0652220:CDS 40.0%
AATTACCTTCCCAGGTGTTA+TGG + chr4_3:59938023-59938042 None:intergenic 40.0%
CGCCTACACCTTCATATTAT+AGG - chr4_3:59938203-59938222 Msa0652220:CDS 40.0%
CGGCAAAGTTCTCTTAAACA+AGG - chr4_3:59938323-59938342 Msa0652220:CDS 40.0%
! GATGGTGCTAACTGCATATA+AGG - chr4_3:59938476-59938495 Msa0652220:intron 40.0%
TGACCTAATCCGAGTTTAAG+CGG - chr4_3:59938524-59938543 Msa0652220:intron 40.0%
AAAGTGGGACGTGTGAATAT+TGG - chr4_3:59938572-59938591 Msa0652220:intron 40.0%
CTATCAGTAGATAACATGCC+AGG + chr4_3:59938619-59938638 None:intergenic 40.0%
CAAGTGTCCTATCACTCTAT+CGG + chr4_3:59938694-59938713 None:intergenic 40.0%
GATAGAGTGATAGGACACTT+GGG - chr4_3:59938693-59938712 Msa0652220:intron 40.0%
AGGTCTAGACTAGGAAAAAG+AGG - chr4_3:59938774-59938793 Msa0652220:intron 40.0%
GGTCTAGACTAGGAAAAAGA+GGG - chr4_3:59938775-59938794 Msa0652220:intron 40.0%
TAGACTAGGAAAAAGAGGGT+GGG - chr4_3:59938779-59938798 Msa0652220:intron 40.0%
GGAGGATAGAATGTGTTAGT+TGG - chr4_3:59938806-59938825 Msa0652220:intron 40.0%
GGATAGAATGTGTTAGTTGG+TGG - chr4_3:59938809-59938828 Msa0652220:intron 40.0%
GGAGGATAGAATGTGTTAGT+TGG - chr4_3:59938806-59938825 Msa0652220:intron 40.0%
AACCATGATGAGCCAATCAT+TGG - chr4_3:59938899-59938918 Msa0652220:intron 40.0%
ACCATGATGAGCCAATCATT+GGG - chr4_3:59938900-59938919 Msa0652220:intron 40.0%
! ATAGAATGTGTCAGTTGGTG+AGG - chr4_3:59938986-59939005 Msa0652220:intron 40.0%
CAGGTGCAGCATAAAAGAAA+AGG + chr4_3:59939271-59939290 None:intergenic 40.0%
!! TACACTTCAGAGTGTTTTGG+TGG - chr4_3:59939460-59939479 Msa0652220:intron 40.0%
! TTTTGGTGGAACCTACTAGT+GGG - chr4_3:59939474-59939493 Msa0652220:intron 40.0%
GCCTTTATAGCAGCTTCTAA+AGG - chr4_3:59939515-59939534 Msa0652220:intron 40.0%
AACTCGTCTTTCCAAACTCA+TGG + chr4_3:59939570-59939589 None:intergenic 40.0%
TGTTGAAGCATGTATGCATC+AGG + chr4_3:59939689-59939708 None:intergenic 40.0%
TGACAATCCTTCAAATCCCA+AGG - chr4_3:59939712-59939731 Msa0652220:intron 40.0%
CCATTTACCTTGGGATTTGA+AGG + chr4_3:59939722-59939741 None:intergenic 40.0%
CCTTCAAATCCCAAGGTAAA+TGG - chr4_3:59939719-59939738 Msa0652220:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr4_3:59939791-59939810 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr4_3:59939792-59939811 None:intergenic 40.0%
TTGCTTATATATGTGACCGG+AGG - chr4_3:59939907-59939926 Msa0652220:intron 40.0%
TGCTTATATATGTGACCGGA+GGG - chr4_3:59939908-59939927 Msa0652220:intron 40.0%
AAAACCCATGCTTCAAACAG+AGG - chr4_3:59939981-59940000 Msa0652220:intron 40.0%
AAACAGAGGTCACAAAGTCT+AGG - chr4_3:59939995-59940014 Msa0652220:intron 40.0%
AGAAAATGGAGGACCAAATG+GGG + chr4_3:59940106-59940125 None:intergenic 40.0%
CAGAAAATGGAGGACCAAAT+GGG + chr4_3:59940107-59940126 None:intergenic 40.0%
TCAGAAAATGGAGGACCAAA+TGG + chr4_3:59940108-59940127 None:intergenic 40.0%
!! CTAGTGACTTGGTATGTTTG+GGG + chr4_3:59940181-59940200 None:intergenic 40.0%
!!! GTGGGGAATTTTAGTTCCTT+AGG - chr4_3:59940217-59940236 Msa0652220:intron 40.0%
GAACTCAACTGAATGCAAAG+GGG + chr4_3:59940263-59940282 None:intergenic 40.0%
AACGTGGTGAACTGCAAATT+TGG - chr4_3:59940320-59940339 Msa0652220:intron 40.0%
CTTGTATCTTCCCATATCTC+TGG + chr4_3:59940380-59940399 None:intergenic 40.0%
GAGATATGGGAAGATACAAG+AGG - chr4_3:59940380-59940399 Msa0652220:intron 40.0%
!! GAAAGTATGTTGCTTTCGAG+AGG + chr4_3:59940716-59940735 None:intergenic 40.0%
CTCGAAAGCAACATACTTTC+AGG - chr4_3:59940716-59940735 Msa0652220:intron 40.0%
GAAAGCAACATACTTTCAGG+TGG - chr4_3:59940719-59940738 Msa0652220:intron 40.0%
CCTGTGGTTTAGCAGAAAAA+AGG + chr4_3:59940827-59940846 None:intergenic 40.0%
!!! CCTTTTTTCTGCTAAACCAC+AGG - chr4_3:59940824-59940843 Msa0652220:intron 40.0%
ACAGGACCTCACAAAATTCA+GGG - chr4_3:59940842-59940861 Msa0652220:intron 40.0%
! CCAATACCCTGAATTTTGTG+AGG + chr4_3:59940851-59940870 None:intergenic 40.0%
CCTCACAAAATTCAGGGTAT+TGG - chr4_3:59940848-59940867 Msa0652220:intron 40.0%
CACTTCTTCATCCAAATTCC+TGG + chr4_3:59940888-59940907 None:intergenic 40.0%
AGACATGGCAATGCTTATAG+AGG + chr4_3:59941154-59941173 None:intergenic 40.0%
ACAAGATAGTGTGTATGTGC+GGG + chr4_3:59941178-59941197 None:intergenic 40.0%
! AAATGTGGAGTACCACTCTT+GGG + chr4_3:59941268-59941287 None:intergenic 40.0%
AGTAAGTGCATATCGGATAC+AGG - chr4_3:59941450-59941469 Msa0652220:intron 40.0%
TTAACTCCCCTGTCTTGATT+TGG - chr4_3:59941645-59941664 Msa0652220:intron 40.0%
TATCTGCCAAATCAAGACAG+GGG + chr4_3:59941654-59941673 None:intergenic 40.0%
GATATCTGCCAAATCAAGAC+AGG + chr4_3:59941656-59941675 None:intergenic 40.0%
AAGCAAATAGCACTTCAGGA+AGG - chr4_3:59941701-59941720 Msa0652220:intron 40.0%
TGTGTAAGTGCGCATGATAT+GGG + chr4_3:59941790-59941809 None:intergenic 40.0%
! GATTGTTACGCGCTACTTTA+AGG + chr4_3:59941949-59941968 None:intergenic 40.0%
! AGGGAAGATTTTCCATTGCT+TGG + chr4_3:59942054-59942073 None:intergenic 40.0%
GAAAATCTTCCCTCCCTTAA+AGG - chr4_3:59942061-59942080 Msa0652220:intron 40.0%
!! CCTTGATAGTTGGCCTTTAA+GGG + chr4_3:59942077-59942096 None:intergenic 40.0%
CCTTAAAGGCCAACTATCAA+GGG - chr4_3:59942075-59942094 Msa0652220:intron 40.0%
CTTAAAGGCCAACTATCAAG+GGG - chr4_3:59942076-59942095 Msa0652220:intron 40.0%
TTAAAGGCCAACTATCAAGG+GGG - chr4_3:59942077-59942096 Msa0652220:intron 40.0%
! GGTGGAGTATTTAACTGGTT+TGG + chr4_3:59942108-59942127 None:intergenic 40.0%
GATAGGGATTTGGGGATTAT+GGG + chr4_3:59942167-59942186 None:intergenic 40.0%
TGATAGGGATTTGGGGATTA+TGG + chr4_3:59942168-59942187 None:intergenic 40.0%
GATCCTTACCTTCATACCAT+TGG - chr4_3:59942293-59942312 Msa0652220:intron 40.0%
! CCTGTTTTCCAATGGTATGA+AGG + chr4_3:59942304-59942323 None:intergenic 40.0%
CCTTCATACCATTGGAAAAC+AGG - chr4_3:59942301-59942320 Msa0652220:intron 40.0%
TCATACCATTGGAAAACAGG+TGG - chr4_3:59942304-59942323 Msa0652220:intron 40.0%
CATACCATTGGAAAACAGGT+GGG - chr4_3:59942305-59942324 Msa0652220:intron 40.0%
! AATTCCCACCTGTTTTCCAA+TGG + chr4_3:59942312-59942331 None:intergenic 40.0%
AAACAGGTGGGAATTTCTTC+AGG - chr4_3:59942317-59942336 Msa0652220:intron 40.0%
AGAATGTGAGAACATGCAAC+CGG - chr4_3:59942676-59942695 Msa0652220:intron 40.0%
! CGAATATCCTTGCATTTTGG+AGG - chr4_3:59942898-59942917 Msa0652220:intron 40.0%
ACGCATGTTAACATGCGTAG+GGG + chr4_3:59932735-59932754 None:intergenic 45.0%
! GTAGATTTGAAGCAATGGCC+GGG - chr4_3:59933388-59933407 Msa0652220:intron 45.0%
GGTGAATCCTTTCATAGCAG+TGG - chr4_3:59933425-59933444 Msa0652220:intron 45.0%
CATATCGATCCACTGGAACT+TGG + chr4_3:59934082-59934101 None:intergenic 45.0%
AGTTCCAGTGGATCGATATG+CGG - chr4_3:59934082-59934101 Msa0652220:intron 45.0%
TTCAAACTTGCCAAACGGCA+AGG - chr4_3:59934226-59934245 Msa0652220:intron 45.0%
AAGGACTCAAGCATTTCGCT+GGG - chr4_3:59934245-59934264 Msa0652220:intron 45.0%
AAGTGTCAAGGAATGGACCA+TGG - chr4_3:59934329-59934348 Msa0652220:intron 45.0%
ATCTAAGTGCCAACGGAATG+AGG + chr4_3:59934456-59934475 None:intergenic 45.0%
!! GAATGGAACAGAAGCACTTC+TGG - chr4_3:59934517-59934536 Msa0652220:intron 45.0%
! CAGGAAGATAGGTTTTCTGG+TGG + chr4_3:59935099-59935118 None:intergenic 45.0%
! CCACAGGAAGATAGGTTTTC+TGG + chr4_3:59935102-59935121 None:intergenic 45.0%
CCAGAAAACCTATCTTCCTG+TGG - chr4_3:59935099-59935118 Msa0652220:CDS 45.0%
!! GATAAGTAGTGGGTATGCTG+GGG + chr4_3:59935242-59935261 None:intergenic 45.0%
GAGAGAGTGAGAATGAGAGA+TGG - chr4_3:59935329-59935348 Msa0652220:intron 45.0%
TGAGAATGAGAGATGGTGTG+AGG - chr4_3:59935336-59935355 Msa0652220:intron 45.0%
TGAGAGATGGTGTGAGGAAA+TGG - chr4_3:59935342-59935361 Msa0652220:intron 45.0%
GAGAGATGGTGTGAGGAAAT+GGG - chr4_3:59935343-59935362 Msa0652220:intron 45.0%
AGAGATGGTGTGAGGAAATG+GGG - chr4_3:59935344-59935363 Msa0652220:intron 45.0%
TTAACTCACGCTAGTTAGGC+CGG - chr4_3:59935634-59935653 Msa0652220:intron 45.0%
! TGTTCTTGAGTTGTGACCAC+CGG + chr4_3:59935656-59935675 None:intergenic 45.0%
! CCGCAGAAACTTTTTACCGT+GGG + chr4_3:59936599-59936618 None:intergenic 45.0%
CCCACGGTAAAAAGTTTCTG+CGG - chr4_3:59936596-59936615 Msa0652220:intron 45.0%
! ACCGCAGAAACTTTTTACCG+TGG + chr4_3:59936600-59936619 None:intergenic 45.0%
!! AATAGTGAGTAGCCGACTTG+GGG + chr4_3:59936664-59936683 None:intergenic 45.0%
AGAGAATTAGAGGGAGAGAG+TGG - chr4_3:59936749-59936768 Msa0652220:intron 45.0%
GAGAATTAGAGGGAGAGAGT+GGG - chr4_3:59936750-59936769 Msa0652220:intron 45.0%
GCAAGTTAACTCACGCTAGT+TGG + chr4_3:59936950-59936969 None:intergenic 45.0%
! TAACTTGCGCTAGTGCTAAG+TGG - chr4_3:59936962-59936981 Msa0652220:intron 45.0%
! ACGCAAGTTAAGTTGCGTAG+GGG - chr4_3:59937067-59937086 Msa0652220:intron 45.0%
!!! TAAGTTGCGTAGGGGCATTT+TGG - chr4_3:59937075-59937094 Msa0652220:intron 45.0%
GAACCTGCTCTTTACCCAAA+CGG + chr4_3:59937126-59937145 None:intergenic 45.0%
CTCCTCCCAAAATTTCTCTG+TGG - chr4_3:59937206-59937225 Msa0652220:intron 45.0%
! GACCACAGAGAAATTTTGGG+AGG + chr4_3:59937211-59937230 None:intergenic 45.0%
GTGGTCTGAACCAACAACAA+TGG - chr4_3:59937225-59937244 Msa0652220:intron 45.0%
GGTTAAGTAGTGAAGAGTGG+GGG + chr4_3:59937293-59937312 None:intergenic 45.0%
GCTGGTTAAGTAGTGAAGAG+TGG + chr4_3:59937296-59937315 None:intergenic 45.0%
AGATTCTGGTGGAGATGGAA+CGG + chr4_3:59937357-59937376 None:intergenic 45.0%
GAGACCTTCAATGGTGGTTT+GGG + chr4_3:59937416-59937435 None:intergenic 45.0%
TGAGACCTTCAATGGTGGTT+TGG + chr4_3:59937417-59937436 None:intergenic 45.0%
GGCAATGTTGAGACCTTCAA+TGG + chr4_3:59937425-59937444 None:intergenic 45.0%
CATTGCCGAAGATGTTACTC+AGG - chr4_3:59937438-59937457 Msa0652220:intron 45.0%
AACCCTTTGCGATGCTATTC+AGG + chr4_3:59937570-59937589 None:intergenic 45.0%
! AGATTGTTTGGGAGCGCATA+TGG - chr4_3:59937709-59937728 Msa0652220:intron 45.0%
AAGAAAGGAGCCATAACACC+TGG - chr4_3:59938010-59938029 Msa0652220:CDS 45.0%
AGAAAGGAGCCATAACACCT+GGG - chr4_3:59938011-59938030 Msa0652220:CDS 45.0%
!! ACGGGGATTAGTCGAAAACT+GGG + chr4_3:59938231-59938250 None:intergenic 45.0%
AGAGATTCTGTTCACTGCAC+TGG - chr4_3:59938377-59938396 Msa0652220:five_prime_UTR 45.0%
! TAACCAAGCCTTTTCCCACT+AGG - chr4_3:59938449-59938468 Msa0652220:intron 45.0%
GACCTAATCCGAGTTTAAGC+GGG - chr4_3:59938525-59938544 Msa0652220:intron 45.0%
ACCTAATCCGAGTTTAAGCG+GGG - chr4_3:59938526-59938545 Msa0652220:intron 45.0%
CGGGGTGTGTGACTATTATA+GGG - chr4_3:59938544-59938563 Msa0652220:intron 45.0%
CGATAGAGTGATAGGACACT+TGG - chr4_3:59938692-59938711 Msa0652220:intron 45.0%
CTAGACTAGGAAAAAGAGGG+TGG - chr4_3:59938778-59938797 Msa0652220:intron 45.0%
AGACTAGGAAAAAGAGGGTG+GGG - chr4_3:59938780-59938799 Msa0652220:intron 45.0%
!! ATGTGTTAGTTGGTGAGGTC+AGG - chr4_3:59938847-59938866 Msa0652220:intron 45.0%
! ATTGGCTCATCATGGTTGTC+AGG + chr4_3:59938896-59938915 None:intergenic 45.0%
CCATGATGAGCCAATCATTG+GGG - chr4_3:59938901-59938920 Msa0652220:intron 45.0%
! ATGTGGTTTGCCCCAATGAT+TGG + chr4_3:59938914-59938933 None:intergenic 45.0%
ATCATTGGGGCAAACCACAT+AGG - chr4_3:59938914-59938933 Msa0652220:intron 45.0%
AACCACATAGGTCCACCATT+TGG - chr4_3:59938926-59938945 Msa0652220:intron 45.0%
!! TTCCAAATGGTGGACCTATG+TGG + chr4_3:59938931-59938950 None:intergenic 45.0%
ACATAGGTCCACCATTTGGA+AGG - chr4_3:59938930-59938949 Msa0652220:intron 45.0%
AGTCTAGACCTTCCAAATGG+TGG + chr4_3:59938941-59938960 None:intergenic 45.0%
CCTAGTCTAGACCTTCCAAA+TGG + chr4_3:59938944-59938963 None:intergenic 45.0%
CCATTTGGAAGGTCTAGACT+AGG - chr4_3:59938941-59938960 Msa0652220:intron 45.0%
AGGTCTAGACTAGGAGAAAG+AGG - chr4_3:59938950-59938969 Msa0652220:intron 45.0%
GGTCTAGACTAGGAGAAAGA+GGG - chr4_3:59938951-59938970 Msa0652220:intron 45.0%
TAGACTAGGAGAAAGAGGGT+GGG - chr4_3:59938955-59938974 Msa0652220:intron 45.0%
GGAGGATAGAATGTGTCAGT+TGG - chr4_3:59938981-59939000 Msa0652220:intron 45.0%
TGGGATCACAAATCCAGAGT+CGG + chr4_3:59939133-59939152 None:intergenic 45.0%
TTCAGAGGCTCTACAGCTAT+GGG + chr4_3:59939152-59939171 None:intergenic 45.0%
TATGGGAAAGGTGAGTTCAG+AGG + chr4_3:59939167-59939186 None:intergenic 45.0%
TAATGCGCACACATAGATGC+AGG + chr4_3:59939290-59939309 None:intergenic 45.0%
!! GTTTTGGTGGAACCTACTAG+TGG - chr4_3:59939473-59939492 Msa0652220:intron 45.0%
ATTCCTGTGTTCCCACTAGT+AGG + chr4_3:59939488-59939507 None:intergenic 45.0%
ACTAGTGGGAACACAGGAAT+TGG - chr4_3:59939488-59939507 Msa0652220:intron 45.0%
AATGCCTGCTTCCATGAGTT+TGG - chr4_3:59939556-59939575 Msa0652220:intron 45.0%
CTTTCCAAACTCATGGAAGC+AGG + chr4_3:59939563-59939582 None:intergenic 45.0%
!!! AGCTGAGCTTGTTTTGACTG+AGG - chr4_3:59939607-59939626 Msa0652220:intron 45.0%
! GTGACCTCTGTTTGAAGCAT+GGG + chr4_3:59939988-59940007 None:intergenic 45.0%
! TGTGACCTCTGTTTGAAGCA+TGG + chr4_3:59939989-59940008 None:intergenic 45.0%
GAGGTCACAAAGTCTAGGTT+AGG - chr4_3:59940000-59940019 Msa0652220:intron 45.0%
ATGCACATCAGTCCTGCTAA+AGG - chr4_3:59940048-59940067 Msa0652220:intron 45.0%
GAAAATGGAGGACCAAATGG+GGG + chr4_3:59940105-59940124 None:intergenic 45.0%
TTAGTTGCAGGGATTGGAAC+TGG - chr4_3:59940416-59940435 Msa0652220:intron 45.0%
TCAATGGCATCGTAGAACCA+TGG - chr4_3:59940505-59940524 Msa0652220:intron 45.0%
CAATGGCATCGTAGAACCAT+GGG - chr4_3:59940506-59940525 Msa0652220:intron 45.0%
AGGGAAGCTTTCTACCTTGT+CGG - chr4_3:59940643-59940662 Msa0652220:intron 45.0%
! ATACTTTCAGGTGGAAAGCC+AGG - chr4_3:59940728-59940747 Msa0652220:intron 45.0%
! CTGAATTTTGTGAGGTCCTG+TGG + chr4_3:59940843-59940862 None:intergenic 45.0%
CACAGGACCTCACAAAATTC+AGG - chr4_3:59940841-59940860 Msa0652220:intron 45.0%
!! AAAATTCAGGGTATTGGGGC+TGG - chr4_3:59940854-59940873 Msa0652220:intron 45.0%
!!! TGGTTTTGTGCCCAGGAATT+TGG - chr4_3:59940874-59940893 Msa0652220:intron 45.0%
GCACAGTCCATTCTTGTCAA+CGG + chr4_3:59941089-59941108 None:intergenic 45.0%
! CTCTTTTCCTAACCCAAGAG+TGG - chr4_3:59941253-59941272 Msa0652220:intron 45.0%
! CAAATGTGGAGTACCACTCT+TGG + chr4_3:59941269-59941288 None:intergenic 45.0%
CTGTGTAAGTGCGCATGATA+TGG + chr4_3:59941791-59941810 None:intergenic 45.0%
! TTACGCGCTACTTTAAGGGA+GGG + chr4_3:59941944-59941963 None:intergenic 45.0%
!! GATAGTTGGCCTTTAAGGGA+GGG + chr4_3:59942073-59942092 None:intergenic 45.0%
!! TGATAGTTGGCCTTTAAGGG+AGG + chr4_3:59942074-59942093 None:intergenic 45.0%
CCCTTAAAGGCCAACTATCA+AGG - chr4_3:59942074-59942093 Msa0652220:intron 45.0%
!! CCCTTGATAGTTGGCCTTTA+AGG + chr4_3:59942078-59942097 None:intergenic 45.0%
TGCAAAGAGGCCTGAAAATG+AGG - chr4_3:59942367-59942386 Msa0652220:intron 45.0%
GCAAAGAGGCCTGAAAATGA+GGG - chr4_3:59942368-59942387 Msa0652220:intron 45.0%
CAGGTTGTATTCCCAAGCTT+TGG - chr4_3:59942611-59942630 Msa0652220:intron 45.0%
!! TACAGCATGGTGGATGATTG+TGG + chr4_3:59942746-59942765 None:intergenic 45.0%
CAATCATCCACCATGCTGTA+AGG - chr4_3:59942746-59942765 Msa0652220:intron 45.0%
CATAGTCATGCCTTACAGCA+TGG + chr4_3:59942759-59942778 None:intergenic 45.0%
! GTTTTGCCCTCCAAAATGCA+AGG + chr4_3:59942908-59942927 None:intergenic 45.0%
!! AATATTAATTCAAATAAAAA+TGG + chr4_3:59934801-59934820 None:intergenic 5.0%
!!! AATAAATTAATTTAGAATAT+AGG + chr4_3:59935831-59935850 None:intergenic 5.0%
!! AAATATAAAAATTATGATAT+TGG + chr4_3:59940782-59940801 None:intergenic 5.0%
!! AAAAAATAAAAAAAATCTTA+TGG - chr4_3:59942428-59942447 Msa0652220:intron 5.0%
TATCTCCACGAGAGGTCGAA+GGG + chr4_3:59932567-59932586 None:intergenic 50.0%
TGCTACCCCACTGCTATGAA+AGG + chr4_3:59933435-59933454 None:intergenic 50.0%
TCATAGCAGTGGGGTAGCAT+TGG - chr4_3:59933436-59933455 Msa0652220:intron 50.0%
TTGCATGAACGTCGATCCAG+CGG + chr4_3:59933831-59933850 None:intergenic 50.0%
CGGAGAAACTCAGAGGTTGA+AGG - chr4_3:59933861-59933880 Msa0652220:CDS 50.0%
TAAACGTCCAAAGCTCGACG+AGG - chr4_3:59933987-59934006 Msa0652220:intron 50.0%
AAACGTCCAAAGCTCGACGA+GGG - chr4_3:59933988-59934007 Msa0652220:intron 50.0%
GTTCCAGTGGATCGATATGC+GGG - chr4_3:59934083-59934102 Msa0652220:intron 50.0%
ATGCTTGAGTCCTTGCCGTT+TGG + chr4_3:59934239-59934258 None:intergenic 50.0%
CAAGGACTCAAGCATTTCGC+TGG - chr4_3:59934244-59934263 Msa0652220:intron 50.0%
! GGTATCGAAGTGTCAAGGTC+TGG - chr4_3:59934429-59934448 Msa0652220:intron 50.0%
CGCACGCTAGTGTAAATCCT+GGG + chr4_3:59935550-59935569 None:intergenic 50.0%
ACGCACGCTAGTGTAAATCC+TGG + chr4_3:59935551-59935570 None:intergenic 50.0%
GTGTGTGAGTTAACTCACGC+TGG + chr4_3:59935595-59935614 None:intergenic 50.0%
GCGTGAGTTAACTCACACAC+AGG - chr4_3:59935595-59935614 Msa0652220:intron 50.0%
TGGGGAAGTGATAGACCGTT+GGG + chr4_3:59936646-59936665 None:intergenic 50.0%
TTGGGGAAGTGATAGACCGT+TGG + chr4_3:59936647-59936666 None:intergenic 50.0%
GGTCTATCACTTCCCCAAGT+CGG - chr4_3:59936649-59936668 Msa0652220:intron 50.0%
AATTAGAGGGAGAGAGTGGG+AGG - chr4_3:59936753-59936772 Msa0652220:intron 50.0%
GAGTGGGAGGAGATAATGTG+AGG - chr4_3:59936766-59936785 Msa0652220:intron 50.0%
GTTAACTCACGCTAGTTGGC+CGG + chr4_3:59936946-59936965 None:intergenic 50.0%
TGGGAATGAGCAGAACCGTT+TGG - chr4_3:59937108-59937127 Msa0652220:intron 50.0%
GGGAATGAGCAGAACCGTTT+GGG - chr4_3:59937109-59937128 Msa0652220:intron 50.0%
GAACCGTTTGGGTAAAGAGC+AGG - chr4_3:59937120-59937139 Msa0652220:intron 50.0%
GATAGCGAATGGGAGTGATG+AGG + chr4_3:59937329-59937348 None:intergenic 50.0%
ATTCTGGTGGAGATGGAACG+GGG + chr4_3:59937355-59937374 None:intergenic 50.0%
GATTCTGGTGGAGATGGAAC+GGG + chr4_3:59937356-59937375 None:intergenic 50.0%
GGAAGAGATTCTGGTGGAGA+TGG + chr4_3:59937362-59937381 None:intergenic 50.0%
TAGAACGGGGGAAGAGATTC+TGG + chr4_3:59937371-59937390 None:intergenic 50.0%
GGTTTGGGAATTGACGGAGA+CGG + chr4_3:59937401-59937420 None:intergenic 50.0%
!! CACGGGGATTAGTCGAAAAC+TGG + chr4_3:59938232-59938251 None:intergenic 50.0%
! CAAGCCTTTTCCCACTAGGT+GGG - chr4_3:59938453-59938472 Msa0652220:intron 50.0%
! AAGCCTTTTCCCACTAGGTG+GGG - chr4_3:59938454-59938473 Msa0652220:intron 50.0%
ACCCCGCTTAAACTCGGATT+AGG + chr4_3:59938530-59938549 None:intergenic 50.0%
TCACACACCCCGCTTAAACT+CGG + chr4_3:59938536-59938555 None:intergenic 50.0%
GCGGGGTGTGTGACTATTAT+AGG - chr4_3:59938543-59938562 Msa0652220:intron 50.0%
CCTATCACTCTATCGGAGTG+TGG + chr4_3:59938687-59938706 None:intergenic 50.0%
CCACACTCCGATAGAGTGAT+AGG - chr4_3:59938684-59938703 Msa0652220:intron 50.0%
! ATTGGCTCATCATGGGCATC+AGG + chr4_3:59938719-59938738 None:intergenic 50.0%
GCCCATGATGAGCCAATCAT+CGG - chr4_3:59938722-59938741 Msa0652220:intron 50.0%
! CCCGATGATTGGCTCATCAT+GGG + chr4_3:59938726-59938745 None:intergenic 50.0%
CCCATGATGAGCCAATCATC+GGG - chr4_3:59938723-59938742 Msa0652220:intron 50.0%
CCATGATGAGCCAATCATCG+GGG - chr4_3:59938724-59938743 Msa0652220:intron 50.0%
! AGTGGATTTGCCCCGATGAT+TGG + chr4_3:59938737-59938756 None:intergenic 50.0%
TCATCGGGGCAAATCCACTT+AGG - chr4_3:59938738-59938757 Msa0652220:intron 50.0%
ATCCACTTAGGTCCACCATC+TGG - chr4_3:59938750-59938769 Msa0652220:intron 50.0%
!! TTCCAGATGGTGGACCTAAG+TGG + chr4_3:59938755-59938774 None:intergenic 50.0%
ACTTAGGTCCACCATCTGGA+AGG - chr4_3:59938754-59938773 Msa0652220:intron 50.0%
AGTCTAGACCTTCCAGATGG+TGG + chr4_3:59938765-59938784 None:intergenic 50.0%
CCTAGTCTAGACCTTCCAGA+TGG + chr4_3:59938768-59938787 None:intergenic 50.0%
CCATCTGGAAGGTCTAGACT+AGG - chr4_3:59938765-59938784 Msa0652220:intron 50.0%
!! ATGTGTTAGTTGGTGGGGTC+AGG - chr4_3:59938816-59938835 Msa0652220:intron 50.0%
!! TGTTAGTTGGTGAGGTCAGG+AGG - chr4_3:59938850-59938869 Msa0652220:intron 50.0%
! CCCCAATGATTGGCTCATCA+TGG + chr4_3:59938904-59938923 None:intergenic 50.0%
CTAGACTAGGAGAAAGAGGG+TGG - chr4_3:59938954-59938973 Msa0652220:intron 50.0%
AAGAGAGAAGGAATGGGCAG+TGG - chr4_3:59939038-59939057 Msa0652220:intron 50.0%
GTTCAGAGGCTCTACAGCTA+TGG + chr4_3:59939153-59939172 None:intergenic 50.0%
GAACCTACTAGTGGGAACAC+AGG - chr4_3:59939482-59939501 Msa0652220:intron 50.0%
!!! TGTTTTGACTGAGGCTGCGA+AGG - chr4_3:59939616-59939635 Msa0652220:intron 50.0%
!!! GTTTTGACTGAGGCTGCGAA+GGG - chr4_3:59939617-59939636 Msa0652220:intron 50.0%
CAAATCCCATGTACTCCCTC+CGG - chr4_3:59939773-59939792 Msa0652220:intron 50.0%
GGGCTTCAGTCAGAAAATGG+AGG + chr4_3:59940117-59940136 None:intergenic 50.0%
TGGGGGCTTCAGTCAGAAAA+TGG + chr4_3:59940120-59940139 None:intergenic 50.0%
AGACAACTGGGCCAGAGATA+TGG - chr4_3:59940366-59940385 Msa0652220:intron 50.0%
GACAACTGGGCCAGAGATAT+GGG - chr4_3:59940367-59940386 Msa0652220:intron 50.0%
GGAACTGGTGGAACCATTTC+TGG - chr4_3:59940431-59940450 Msa0652220:intron 50.0%
!! GGTGGAACCATTTCTGGAAC+CGG - chr4_3:59940437-59940456 Msa0652220:intron 50.0%
! GAATCGACCGGTTCCAGAAA+TGG + chr4_3:59940447-59940466 None:intergenic 50.0%
TGTGTATGTGCGGGTAGACA+TGG + chr4_3:59941169-59941188 None:intergenic 50.0%
! TGGAGTACCACTCTTGGGTT+AGG + chr4_3:59941263-59941282 None:intergenic 50.0%
! ACTTTAAGGGAGGGAAGGGA+AGG + chr4_3:59941935-59941954 None:intergenic 50.0%
! CGCTACTTTAAGGGAGGGAA+GGG + chr4_3:59941939-59941958 None:intergenic 50.0%
! GTTACGCGCTACTTTAAGGG+AGG + chr4_3:59941945-59941964 None:intergenic 50.0%
! GGTTCTTCCCCCTTGATAGT+TGG + chr4_3:59942087-59942106 None:intergenic 50.0%
CTGCATTGCAGGTTGCAAAG+AGG - chr4_3:59942354-59942373 Msa0652220:intron 50.0%
AGTCATGCCTTACAGCATGG+TGG + chr4_3:59942756-59942775 None:intergenic 50.0%
ATCTCCACGAGAGGTCGAAG+GGG + chr4_3:59932566-59932585 None:intergenic 55.0%
GTATCTCCACGAGAGGTCGA+AGG + chr4_3:59932568-59932587 None:intergenic 55.0%
GGCAGAATGAGGTTCTGCCT+CGG + chr4_3:59932844-59932863 None:intergenic 55.0%
! GATTTGAAGCAATGGCCGGG+TGG - chr4_3:59933391-59933410 Msa0652220:intron 55.0%
! AATTGTGCTAGCTTCGCCGC+TGG - chr4_3:59933812-59933831 Msa0652220:intron 55.0%
TCAACGGCGGAGAAACTCAG+AGG - chr4_3:59933854-59933873 Msa0652220:intron 55.0%
! TGTCTGTGGGGTTGACTCCT+TGG + chr4_3:59933942-59933961 None:intergenic 55.0%
GAGTCAACCCCACAGACACA+AGG - chr4_3:59933944-59933963 Msa0652220:intron 55.0%
TCAACCCCACAGACACAAGG+AGG - chr4_3:59933947-59933966 Msa0652220:intron 55.0%
CAACCCCACAGACACAAGGA+GGG - chr4_3:59933948-59933967 Msa0652220:intron 55.0%
TGCACCCTCCTTGTGTCTGT+GGG + chr4_3:59933955-59933974 None:intergenic 55.0%
TTGCACCCTCCTTGTGTCTG+TGG + chr4_3:59933956-59933975 None:intergenic 55.0%
AACGTCCAAAGCTCGACGAG+GGG - chr4_3:59933989-59934008 Msa0652220:intron 55.0%
ATGTTCCCCTCGTCGAGCTT+TGG + chr4_3:59933997-59934016 None:intergenic 55.0%
TCACCCGCATATCGATCCAC+TGG + chr4_3:59934089-59934108 None:intergenic 55.0%
GTCAAGGAATGGACCATGGC+AGG - chr4_3:59934333-59934352 Msa0652220:intron 55.0%
AATGGACCATGGCAGGACAC+CGG - chr4_3:59934340-59934359 Msa0652220:intron 55.0%
AAACACTCCCGGACGAATGC+CGG + chr4_3:59934362-59934381 None:intergenic 55.0%
AGGTCTGGACCTCATTCCGT+TGG - chr4_3:59934444-59934463 Msa0652220:intron 55.0%
AGTAGTGAAGAGTGGGGGTG+CGG + chr4_3:59937288-59937307 None:intergenic 55.0%
GAATGGGAGTGATGAGGTGG+AGG + chr4_3:59937323-59937342 None:intergenic 55.0%
AGCGAATGGGAGTGATGAGG+TGG + chr4_3:59937326-59937345 None:intergenic 55.0%
AACGGGGGGAGATAGCGAAT+GGG + chr4_3:59937339-59937358 None:intergenic 55.0%
TTCTGGTGGAGATGGAACGG+GGG + chr4_3:59937354-59937373 None:intergenic 55.0%
AACGGGGGAAGAGATTCTGG+TGG + chr4_3:59937368-59937387 None:intergenic 55.0%
CTCTTCCCCCGTTCTATGCA+AGG - chr4_3:59937375-59937394 Msa0652220:intron 55.0%
AGACGGCCTTGCATAGAACG+GGG + chr4_3:59937384-59937403 None:intergenic 55.0%
GAGACGGCCTTGCATAGAAC+GGG + chr4_3:59937385-59937404 None:intergenic 55.0%
GGAGACGGCCTTGCATAGAA+CGG + chr4_3:59937386-59937405 None:intergenic 55.0%
AGGAGCCATAACACCTGGGA+AGG - chr4_3:59938015-59938034 Msa0652220:CDS 55.0%
CCACCTAGTGGGAAAAGGCT+TGG + chr4_3:59938455-59938474 None:intergenic 55.0%
! CCAAGCCTTTTCCCACTAGG+TGG - chr4_3:59938452-59938471 Msa0652220:intron 55.0%
CATCCCCACCTAGTGGGAAA+AGG + chr4_3:59938460-59938479 None:intergenic 55.0%
! CTTTTCCCACTAGGTGGGGA+TGG - chr4_3:59938458-59938477 Msa0652220:intron 55.0%
TAGCACCATCCCCACCTAGT+GGG + chr4_3:59938466-59938485 None:intergenic 55.0%
TTAGCACCATCCCCACCTAG+TGG + chr4_3:59938467-59938486 None:intergenic 55.0%
! CCCCGATGATTGGCTCATCA+TGG + chr4_3:59938727-59938746 None:intergenic 55.0%
AGGAAAAAGAGGGTGGGGTC+AGG - chr4_3:59938785-59938804 Msa0652220:intron 55.0%
AAAAAGAGGGTGGGGTCAGG+AGG - chr4_3:59938788-59938807 Msa0652220:intron 55.0%
!! TGTTAGTTGGTGGGGTCAGG+AGG - chr4_3:59938819-59938838 Msa0652220:intron 55.0%
CATGGTTGTCAGGCCCAATG+TGG + chr4_3:59938886-59938905 None:intergenic 55.0%
TAGGAGAAAGAGGGTGGGTC+AGG - chr4_3:59938960-59938979 Msa0652220:intron 55.0%
! GAGGCTGCGAAGGGTATGAA+TGG - chr4_3:59939626-59939645 Msa0652220:intron 55.0%
! TGTGACCGGAGGGAGTACAT+GGG + chr4_3:59939781-59939800 None:intergenic 55.0%
! ATGTGACCGGAGGGAGTACA+TGG + chr4_3:59939782-59939801 None:intergenic 55.0%
AATGGAGGACCAAATGGGGG+TGG + chr4_3:59940102-59940121 None:intergenic 55.0%
GTTGCAGGGATTGGAACTGG+TGG - chr4_3:59940419-59940438 Msa0652220:intron 55.0%
!! GCTCTAGGGACTATCTGACC+AGG - chr4_3:59941323-59941342 Msa0652220:intron 55.0%
AGCACTTCAGGAAGGCTTGC+TGG - chr4_3:59941709-59941728 Msa0652220:intron 55.0%
! GCGCTACTTTAAGGGAGGGA+AGG + chr4_3:59941940-59941959 None:intergenic 55.0%
GTTGAAGGGCCGTTGATCAG+TGG + chr4_3:59942867-59942886 None:intergenic 55.0%
ATTGCCCCTTCGACCTCTCG+TGG - chr4_3:59932559-59932578 Msa0652220:three_prime_UTR 60.0%
GCACCCTCCTTGTGTCTGTG+GGG + chr4_3:59933954-59933973 None:intergenic 60.0%
! GGGAGCACACCAAGTTCCAG+TGG - chr4_3:59934070-59934089 Msa0652220:intron 60.0%
GCGTGAGTTAACTCACGCCC+AGG - chr4_3:59935530-59935549 Msa0652220:intron 60.0%
GCGTGCGTTAACTCACGCAC+AGG - chr4_3:59935563-59935582 Msa0652220:intron 60.0%
ACTCACGCTAGTTAGGCCGG+TGG - chr4_3:59935637-59935656 Msa0652220:intron 60.0%
! GTAGTGAAGAGTGGGGGTGC+GGG + chr4_3:59937287-59937306 None:intergenic 60.0%
GGAGTGATGAGGTGGAGGTG+CGG + chr4_3:59937318-59937337 None:intergenic 60.0%
GAACGGGGGGAGATAGCGAA+TGG + chr4_3:59937340-59937359 None:intergenic 60.0%
TCTGGTGGAGATGGAACGGG+GGG + chr4_3:59937353-59937372 None:intergenic 60.0%
GACGGCCTTGCATAGAACGG+GGG + chr4_3:59937383-59937402 None:intergenic 60.0%
AAGGTGTAGGCGTGCAGCAC+AGG + chr4_3:59938195-59938214 None:intergenic 60.0%
GAGAAAGAGGGTGGGTCAGG+AGG - chr4_3:59938963-59938982 Msa0652220:intron 60.0%
CTGGTAGGAGTCTCCGACTC+TGG - chr4_3:59939117-59939136 Msa0652220:intron 60.0%
AGCCTAGTGCCACCCCCATT+TGG - chr4_3:59940090-59940109 Msa0652220:intron 60.0%
GACCAAATGGGGGTGGCACT+AGG + chr4_3:59940095-59940114 None:intergenic 60.0%
!!! TTGGGGCTGGTTTTGTGCCC+AGG - chr4_3:59940867-59940886 Msa0652220:intron 60.0%
GGGAAGGTTCCCCAAGTGCT+TGG + chr4_3:59941919-59941938 None:intergenic 60.0%
TGCTGCTGCAGCTGCATTGC+AGG - chr4_3:59942343-59942362 Msa0652220:intron 60.0%
CGAATGCCGGTGTCCTGCCA+TGG + chr4_3:59934349-59934368 None:intergenic 65.0%
GCAGGACACCGGCATTCGTC+CGG - chr4_3:59934351-59934370 Msa0652220:intron 65.0%
CAGGACACCGGCATTCGTCC+GGG - chr4_3:59934352-59934371 Msa0652220:intron 65.0%
! TGATGAGGTGGAGGTGCGGC+TGG + chr4_3:59937314-59937333 None:intergenic 65.0%
ATGGCCGGGTGGATCGACGC+AGG - chr4_3:59933402-59933421 Msa0652220:intron 70.0%
TGGCCGGGTGGATCGACGCA+GGG - chr4_3:59933403-59933422 Msa0652220:intron 70.0%
! CACCCCTGCGTCGATCCACC+CGG + chr4_3:59933409-59933428 None:intergenic 70.0%
GGCCGGGTGGATCGACGCAG+GGG - chr4_3:59933404-59933423 Msa0652220:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 59932555 59943036 59932555 ID=Msa0652220;Name=Msa0652220
chr4_3 mRNA 59932555 59943036 59932555 ID=Msa0652220-mRNA-1;Parent=Msa0652220;Name=Msa0652220-mRNA-1;_AED=0.32;_eAED=0.32;_QI=208|0.9|0.90|1|0.9|0.81|11|330|363
chr4_3 exon 59932555 59932977 59932555 ID=Msa0652220-mRNA-1:exon:16226;Parent=Msa0652220-mRNA-1
chr4_3 exon 59933188 59933268 59933188 ID=Msa0652220-mRNA-1:exon:16225;Parent=Msa0652220-mRNA-1
chr4_3 exon 59933861 59933920 59933861 ID=Msa0652220-mRNA-1:exon:16224;Parent=Msa0652220-mRNA-1
chr4_3 exon 59934666 59934745 59934666 ID=Msa0652220-mRNA-1:exon:16223;Parent=Msa0652220-mRNA-1
chr4_3 exon 59934842 59934893 59934842 ID=Msa0652220-mRNA-1:exon:16222;Parent=Msa0652220-mRNA-1
chr4_3 exon 59935098 59935235 59935098 ID=Msa0652220-mRNA-1:exon:16221;Parent=Msa0652220-mRNA-1
chr4_3 exon 59935918 59936121 59935918 ID=Msa0652220-mRNA-1:exon:16220;Parent=Msa0652220-mRNA-1
chr4_3 exon 59937555 59937612 59937555 ID=Msa0652220-mRNA-1:exon:16219;Parent=Msa0652220-mRNA-1
chr4_3 exon 59937941 59938050 59937941 ID=Msa0652220-mRNA-1:exon:16218;Parent=Msa0652220-mRNA-1
chr4_3 exon 59938132 59938441 59938132 ID=Msa0652220-mRNA-1:exon:16217;Parent=Msa0652220-mRNA-1
chr4_3 exon 59942923 59943036 59942923 ID=Msa0652220-mRNA-1:exon:16216;Parent=Msa0652220-mRNA-1
chr4_3 five_prime_UTR 59942923 59943036 59942923 ID=Msa0652220-mRNA-1:five_prime_utr;Parent=Msa0652220-mRNA-1
chr4_3 five_prime_UTR 59938348 59938441 59938348 ID=Msa0652220-mRNA-1:five_prime_utr;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59938132 59938347 59938132 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59937941 59938050 59937941 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59937555 59937612 59937555 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59935918 59936121 59935918 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59935098 59935235 59935098 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59934842 59934893 59934842 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59934666 59934745 59934666 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59933861 59933920 59933861 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59933188 59933268 59933188 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 CDS 59932885 59932977 59932885 ID=Msa0652220-mRNA-1:cds;Parent=Msa0652220-mRNA-1
chr4_3 three_prime_UTR 59932555 59932884 59932555 ID=Msa0652220-mRNA-1:three_prime_utr;Parent=Msa0652220-mRNA-1
Gene Sequence

>Msa0652220

ATGGCTTCTACTTCCTTAATCAACTCATTGACTTTTACTTCCCGCACCCCCACTCTTCACTACTTAACCAGCCGCACCTCCACCTCATCACTCCCATTCGCTATCTCCCCCCGTTCCATCTCCACCAGAATCTCTTCCCCCGTTCTATGCAAGGCCGTCTCCGTCAATTCCCAAACCACCATTGAAGGTCTCAACATTGCCGAAGATGTTACTCAGCTCATAGGAAAAACACCAATGGTTTACCTGAATAGCATCGCAAAGGGTTCCGTTGCTAATATTGCTGCTAAGCTTGAGATTATGGAGCCTTGTTGTAGTGTCAAAGACAGGATAGGTTATAGTATGATACTTGATGCTGAGAAGAAAGGAGCCATAACACCTGGGAAGAGTGTTTTGGTGGAACCTACTAGTGGGAACACAGGAATTGGTCTTGCCTTTATAGCAGCTTCTAAAGGTTATAAACTCATTTTAACAATGCCTGCTTCCATGAGTTTGGAAAGACGAGTTCTTTTGAAAGCATTTGGAGCTGAGCTTGTTTTGACTGAGGCTGCGAAGGGTATGAATGGAGCAGTTCAAAAAGCTGAAGAAATTATACATTTTGAGACAACTGGGCCAGAGATATGGGAAGATACAAGAGGCAAAATAGATATTTTAGTTGCAGGGATTGGAACTGGTGGAACCATTTCTGGAACCGGTCGATTCCTAAAACAACAAAATTCAAAAGTACAGGTTATTGGTGTAGAGCCTCTCGAAAGCAACATACTTTCAGGTGGAAAGCCAGGACCTCACAAAATTCAGGGTATTGGGGCTGGTTTTGTGCCCAGGAATTTGGATGAAGAAGTGCTTGATGAAGTTATAGCGATATCCAGTGATGAAGCTATTGAAACTACAAAGCAAATAGCACTTCAGGAAGGCTTGCTGGTGGGAATTTCTTCAGGTGCTGCTGCTGCAGCTGCATTGCAGGTTGCAAAGAGGCCTGAAAATGAGGGAAAGCTTATTGGGGTTGTATTCCCAAGCTTTGGTGAAAGATATTTGTCCACTGTTCTTTTCCAGAAAATTCGAGAAGAATGTGAGAACATGCAACCGGAGCCATGA

Protein sequence

>Msa0652220

MASTSLINSLTFTSRTPTLHYLTSRTSTSSLPFAISPRSISTRISSPVLCKAVSVNSQTTIEGLNIAEDVTQLIGKTPMVYLNSIAKGSVANIAAKLEIMEPCCSVKDRIGYSMILDAEKKGAITPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTEAAKGMNGAVQKAEEIIHFETTGPEIWEDTRGKIDILVAGIGTGGTISGTGRFLKQQNSKVQVIGVEPLESNILSGGKPGPHKIQGIGAGFVPRNLDEEVLDEVIAISSDEAIETTKQIALQEGLLVGISSGAAAAAALQVAKRPENEGKLIGVVFPSFGERYLSTVLFQKIREECENMQPEP*