AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0653700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0653700 MtrunA17_Chr4g0047751 92.840 419 2 2 1 419 1 391 0.0 788
Msa0653700 MtrunA17_Chr4g0047751 89.655 203 6 1 516 718 392 579 9.34e-109 342
Msa0653700 MtrunA17_Chr2g0282041 77.435 421 52 4 1 419 1 380 0.0 638
Msa0653700 MtrunA17_Chr2g0282041 77.835 194 25 4 516 706 381 559 8.01e-62 217
Msa0653700 MtrunA17_Chr2g0313531 56.284 183 60 3 1 181 1 165 5.66e-45 158
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0653700 AT4G21660.1 73.095 420 77 6 5 419 8 396 0.0 568
Msa0653700 AT4G21660.1 75.904 166 38 1 516 681 397 560 1.33e-59 211
Msa0653700 AT4G21660.2 70.737 434 77 7 5 419 8 410 0.0 557
Msa0653700 AT4G21660.2 75.904 166 38 1 516 681 411 574 1.70e-59 211
Msa0653700 AT4G21660.3 81.643 207 15 1 213 419 307 490 2.58e-113 357
Msa0653700 AT4G21660.3 63.927 219 68 4 2 215 3 215 1.53e-61 219
Msa0653700 AT4G21660.3 75.904 166 38 1 516 681 491 654 7.78e-59 211
Msa0653700 AT1G11520.1 72.807 114 28 2 555 667 85 196 2.43e-45 160

Find 199 sgRNAs with CRISPR-Local

Find 625 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTCGGGCGTCCACTTTA+TGG 0.179680 4_3:+61856726 Msa0653700:CDS
TTCCAGGTTGATTTGCTTAA+AGG 0.222619 4_3:+61859381 Msa0653700:intron
CTGACACGTTCTTCTGTATA+AGG 0.229368 4_3:-61860211 None:intergenic
GAAGATGGATATTGATTATC+AGG 0.250368 4_3:+61855502 Msa0653700:CDS
GCGGCCATCGTTGCGGGATT+TGG 0.258522 4_3:-61852403 None:intergenic
TTGGTTATCATCCTGGTGGC+TGG 0.271971 4_3:+61856529 Msa0653700:CDS
GGCGCGTGTAAGAAAGTTAT+TGG 0.274731 4_3:-61852311 None:intergenic
GGTTCAAATTTAGTCCATTT+AGG 0.284492 4_3:+61860308 Msa0653700:three_prime_UTR
GTCTGCATCTTGAGCAGTTC+GGG 0.294396 4_3:+61856712 Msa0653700:CDS
ACTTGATAAAGAGGCCTTTC+AGG 0.294843 4_3:-61858976 None:intergenic
AAGACAAGTCAGGGGCAAAA+AGG 0.303775 4_3:+61859270 Msa0653700:CDS
CAAGACATATGCATCCCTTT+TGG 0.313100 4_3:-61860340 None:intergenic
TGTAAACCAACCTCATAATT+AGG 0.313993 4_3:-61856780 None:intergenic
GTTTCTGCGGCCATCGTTGC+GGG 0.314811 4_3:-61852409 None:intergenic
AAATGCTATTACAAAGAAAA+AGG 0.326011 4_3:+61853790 Msa0653700:CDS
GAAAATCAACAAAGCCTCTA+AGG 0.336747 4_3:+61852540 Msa0653700:CDS
AGTCTCAAACAAGAAGAAAA+AGG 0.338769 4_3:+61853865 Msa0653700:CDS
AAGTTCAACTTTGCAATTAG+AGG 0.344806 4_3:+61856806 Msa0653700:CDS
CAGTGTTTCTACAGGTGTTA+TGG 0.344990 4_3:-61857703 None:intergenic
ATGATTTACATCTTATGTTC+TGG 0.352585 4_3:+61860287 Msa0653700:three_prime_UTR
CTTGCTCCTGGAACTTTGCT+TGG 0.355394 4_3:+61859106 Msa0653700:CDS
GTCGTTTCCAACGGAGATCT+TGG 0.362403 4_3:+61852451 Msa0653700:CDS
TTACACAAGAGGCTGTTTCC+AGG 0.378319 4_3:-61859784 None:intergenic
TGACTTGGAAGAGGAGGAAG+AGG 0.383213 4_3:+61858426 Msa0653700:CDS
TATTCAAACATCAGTGGTAC+TGG 0.383824 4_3:+61857387 Msa0653700:CDS
AGAGGAAGAAGAGGAGGAAG+AGG 0.388573 4_3:+61858459 Msa0653700:CDS
AGCCAAAGCTGTCATCTCTT+GGG 0.389562 4_3:+61855682 Msa0653700:CDS
GTTTGCGTTTGGTTCCTTAG+AGG 0.393563 4_3:-61852554 None:intergenic
GAATGGGAGCATTCAGGCCG+GGG 0.395624 4_3:-61856491 None:intergenic
TGGTTATCATCCTGGTGGCT+GGG 0.397033 4_3:+61856530 Msa0653700:CDS
ATGACAGCTTTGGCTTTGTC+TGG 0.409816 4_3:-61855674 None:intergenic
AAGAAGTCAATGAAGTGAAA+AGG 0.410026 4_3:-61856684 None:intergenic
TTCAAGAATACCAACAACTT+TGG 0.411732 4_3:-61854200 None:intergenic
TGTCTGCATCTTGAGCAGTT+CGG 0.412182 4_3:+61856711 Msa0653700:CDS
GGTAGATAAAACAAAACATT+GGG 0.413170 4_3:+61858402 Msa0653700:CDS
GCGCGTGTAAGAAAGTTATT+GGG 0.413473 4_3:-61852310 None:intergenic
AAGCCAAAGCTGTCATCTCT+TGG 0.416693 4_3:+61855681 Msa0653700:CDS
TCTTCGGAGGCGTTTGCGTT+TGG 0.417922 4_3:-61852565 None:intergenic
CACTTTACTGCCAGAGGAGT+TGG 0.419852 4_3:+61859428 Msa0653700:CDS
AGAAGTCAATGAAGTGAAAA+GGG 0.428583 4_3:-61856683 None:intergenic
AACTCATGTGATAACATGCC+AGG 0.430534 4_3:-61856292 None:intergenic
TTCAGCAGATCCAAAGTTGT+TGG 0.431447 4_3:+61854190 Msa0653700:CDS
GTTATAGGAAGAATTCAGTT+TGG 0.432339 4_3:-61852332 None:intergenic
ATCCAAGTATGTCTCATTAA+CGG 0.432808 4_3:-61860266 None:intergenic
CAATGTGTTGCTTGGAGTTA+CGG 0.433164 4_3:+61857665 Msa0653700:CDS
GGAGGAAGAAGAGGAAGAAG+AGG 0.435633 4_3:+61858450 Msa0653700:CDS
CAAGGGAGGAAGAGAAATTA+CGG 0.439241 4_3:+61859579 Msa0653700:CDS
AACAAAACATTGGGGTGACT+TGG 0.439536 4_3:+61858411 Msa0653700:CDS
CCCGTGCGATATAGAGTTAT+AGG 0.444445 4_3:-61852347 None:intergenic
ACGGGCACCCAAGACAAGTC+AGG 0.445877 4_3:+61859260 Msa0653700:CDS
AGTTCAACTTTGCAATTAGA+GGG 0.446295 4_3:+61856807 Msa0653700:CDS
GGAAGAGGAGGAGGAAGAAG+AGG 0.449096 4_3:+61858441 Msa0653700:CDS
TCCCCAAGAGATGACAGCTT+TGG 0.450747 4_3:-61855684 None:intergenic
AAGGTCACGGGTTCAAGTCC+TGG 0.451424 4_3:+61859766 Msa0653700:intron
TTCCATGAGCAGCAGAGGAT+TGG 0.452921 4_3:+61860080 Msa0653700:three_prime_UTR
GGTTATCATCCTGGTGGCTG+GGG 0.453641 4_3:+61856531 Msa0653700:CDS
AGCCAATCCTCTGCTGCTCA+TGG 0.457489 4_3:-61860082 None:intergenic
GGAAGAGGAGGAAGAGGAGG+AGG 0.457668 4_3:+61858432 Msa0653700:CDS
CTCCGACAGTCGACAGTAGC+AGG 0.458381 4_3:-61857588 None:intergenic
TCCATTTCTCTCCAGTTATG+TGG 0.459234 4_3:+61859232 Msa0653700:intron
CTTGGAGTTACGGTCCCTAC+AGG 0.461222 4_3:+61857675 Msa0653700:CDS
ATAAAATCAGGAAGCTGAAA+AGG 0.461748 4_3:-61854811 None:intergenic
ATACCAACCTCGACAACATC+AGG 0.464230 4_3:-61854029 None:intergenic
CAAGTTGCTAAACACAGAAA+TGG 0.464641 4_3:+61852287 Msa0653700:five_prime_UTR
AGCAGAGCTATATGAAGGCT+TGG 0.468590 4_3:+61853598 Msa0653700:CDS
GAAAGACTCACTTGATAAAG+AGG 0.469037 4_3:-61858985 None:intergenic
CTCCAGTTATGTGGTTGGCA+CGG 0.469111 4_3:+61859241 Msa0653700:intron
GTAGTTCCAAGCAAAGTTCC+AGG 0.471231 4_3:-61859112 None:intergenic
ATTTGGTCGGATTCACGAAT+GGG 0.472463 4_3:-61852386 None:intergenic
CATTTACCTGCAAAATAAAG+AGG 0.473109 4_3:-61860019 None:intergenic
CCTGTGGCAGCAATAAAATC+AGG 0.473988 4_3:-61854823 None:intergenic
GCAAGATCAGCCTAATTATG+AGG 0.475324 4_3:+61856770 Msa0653700:CDS
GGAATGGGAGCATTCAGGCC+GGG 0.476667 4_3:-61856492 None:intergenic
TCCAGTTATGTGGTTGGCAC+GGG 0.478302 4_3:+61859242 Msa0653700:intron
TGACACCAGTGCCTGGGTAC+AGG 0.479653 4_3:-61854242 None:intergenic
CTGTGATGAGGGTAAAGATC+AGG 0.484562 4_3:+61857622 Msa0653700:CDS
AGAATGAGAAGAAGAGGAAG+AGG 0.486246 4_3:+61859936 Msa0653700:intron
GGGAATGGGAGCATTCAGGC+CGG 0.487332 4_3:-61856493 None:intergenic
CCATCGTTGCGGGATTTGGT+CGG 0.491412 4_3:-61852399 None:intergenic
TGATAACCAAAACTAGCTCC+TGG 0.491641 4_3:-61856516 None:intergenic
GGAAGAAGACATCGAGGAGG+AGG 0.492383 4_3:+61858480 Msa0653700:CDS
TGATGCAGAATGAGAAGAAG+AGG 0.492413 4_3:+61859930 Msa0653700:intron
AAAGTTGAAACAAAAGCAAC+GGG 0.492868 4_3:+61855457 Msa0653700:CDS
TTTCTCTCCAGTTATGTGGT+TGG 0.493505 4_3:+61859236 Msa0653700:intron
GGAAGAAGAGGAAGAAGAGG+AGG 0.494055 4_3:+61858453 Msa0653700:CDS
ATTCATTCTCCAGTGAAAAG+AGG 0.496758 4_3:+61857440 Msa0653700:CDS
TTTGGAGCCAAGATCTCCGT+TGG 0.497901 4_3:-61852458 None:intergenic
GATCAGCCTAATTATGAGGT+TGG 0.500033 4_3:+61856774 Msa0653700:CDS
TGGGTACAGGTACAGTATTT+CGG 0.500237 4_3:-61854229 None:intergenic
TCCATGACATCCAACTCCTC+TGG 0.503135 4_3:-61859438 None:intergenic
GCCAGAGGAGTTGGATGTCA+TGG 0.505402 4_3:+61859437 Msa0653700:CDS
GGAGGCTTGCCCCAGCCACC+AGG 0.505676 4_3:-61856540 None:intergenic
GTTACTTAGTTTCTGTGATG+AGG 0.507935 4_3:+61857610 Msa0653700:CDS
GTGTTATGGTCTCTCCTGTA+GGG 0.510568 4_3:-61857689 None:intergenic
TATCTAGGATAATGATAAGA+AGG 0.513629 4_3:+61853754 Msa0653700:intron
ATCTTCAGAGAAGGGTATGA+TGG 0.513760 4_3:-61856468 None:intergenic
CGTTTCTGCGGCCATCGTTG+CGG 0.515435 4_3:-61852410 None:intergenic
TGGCACTGCAATGTGTTGCT+TGG 0.519023 4_3:+61857657 Msa0653700:CDS
ATCCGTTAATGAGACATACT+TGG 0.521806 4_3:+61860264 Msa0653700:three_prime_UTR
TCCTATAACTCTATATCGCA+CGG 0.522370 4_3:+61852346 Msa0653700:five_prime_UTR
ATATCGCACGGGAACCCTCT+CGG 0.522773 4_3:+61852358 Msa0653700:five_prime_UTR
CAGCGAGGTTATTGATTCAG+AGG 0.524730 4_3:+61853658 Msa0653700:CDS
GATTTGGTCGGATTCACGAA+TGG 0.524887 4_3:-61852387 None:intergenic
CTTGGAAGAGGAGGAAGAGG+AGG 0.526037 4_3:+61858429 Msa0653700:CDS
GCGACCGTCGTCGCCGTCGC+CGG 0.528117 4_3:+61852509 Msa0653700:CDS
TTACTTAGTTTCTGTGATGA+GGG 0.531389 4_3:+61857611 Msa0653700:CDS
AATTAGGCTGATCTTGCTGA+TGG 0.532430 4_3:-61856764 None:intergenic
CGGGCACCCAAGACAAGTCA+GGG 0.533145 4_3:+61859261 Msa0653700:CDS
TCAAAAGAGAAAATTTCTGC+AGG 0.533803 4_3:+61854262 Msa0653700:CDS
TCATGAAGGAAAAGAATTTG+AGG 0.534425 4_3:+61855713 Msa0653700:CDS
GGTGTTATGGTCTCTCCTGT+AGG 0.535629 4_3:-61857690 None:intergenic
GTTTCCGGCGACGGCGACGA+CGG 0.537767 4_3:-61852513 None:intergenic
TTACGAAGGTCAATAACATC+AGG 0.537927 4_3:-61858937 None:intergenic
AAGTTGAGGGAGATGAAACC+TGG 0.539261 4_3:+61856274 Msa0653700:CDS
GCTATATGAAGGCTTGGATG+AGG 0.545895 4_3:+61853604 Msa0653700:CDS
TACCCTTCTCTGAAGATCCC+CGG 0.547560 4_3:+61856474 Msa0653700:CDS
GAGGAGGAGGCACTTGAAGA+TGG 0.549207 4_3:+61858493 Msa0653700:CDS
CTGTACCTGTACCCAGGCAC+TGG 0.549555 4_3:+61854237 Msa0653700:CDS
TCCGTGGCTTATTAACATGC+AGG 0.549813 4_3:+61856351 Msa0653700:CDS
CATGAGTTGAAAGAAGCTCT+TGG 0.550562 4_3:+61856307 Msa0653700:CDS
TGAAGGACATTGTACACGGC+TGG 0.553486 4_3:+61857361 Msa0653700:intron
ACCCTGCTACTGTCGACTGT+CGG 0.560471 4_3:+61857586 Msa0653700:CDS
ATTCCAGGTATAACGAAGCA+AGG 0.561189 4_3:+61859561 Msa0653700:intron
CGCAAGGCCTGATGTTGTCG+AGG 0.562446 4_3:+61854022 Msa0653700:CDS
GGGCAAGCCTCCTGTTGATG+AGG 0.562702 4_3:+61856551 Msa0653700:CDS
AAAGGGATGCATATGTCTTG+TGG 0.563021 4_3:+61860343 Msa0653700:three_prime_UTR
CTTGGGGACTTGTATCATGA+AGG 0.563151 4_3:+61855699 Msa0653700:CDS
CACGGAGGAGGAGAACCCTC+AGG 0.564156 4_3:-61856334 None:intergenic
TCTCACAATGCAGGAAGAGC+CGG 0.564626 4_3:+61858381 Msa0653700:intron
GCAGGCTTATATTGAGAAAG+AGG 0.564885 4_3:+61855427 Msa0653700:intron
AGTTGAAATTGAGTATGTAC+CGG 0.570225 4_3:+61853571 Msa0653700:CDS
CCTTCCTCTGCTCCTTACGA+AGG 0.570728 4_3:-61858951 None:intergenic
ACATTGGGGTGACTTGGAAG+AGG 0.570852 4_3:+61858417 Msa0653700:CDS
GGCAGACTCTGATTCTGAAG+AGG 0.573433 4_3:+61853811 Msa0653700:CDS
TTTGTGTTCAGCTTCAACGC+AGG 0.573485 4_3:+61853970 Msa0653700:intron
TGATGTTATTGACCTTCGTA+AGG 0.573751 4_3:+61858939 Msa0653700:CDS
GATAACCAAAACTAGCTCCT+GGG 0.574197 4_3:-61856515 None:intergenic
ACCTGCATGTTAATAAGCCA+CGG 0.574698 4_3:-61856352 None:intergenic
TGCTGTGCAGGTAAAGTTGA+GGG 0.575661 4_3:+61856261 Msa0653700:intron
GCCAAAGCTGTCATCTCTTG+GGG 0.575826 4_3:+61855683 Msa0653700:CDS
AAAAGTTGAAACAAAAGCAA+CGG 0.576402 4_3:+61855456 Msa0653700:CDS
GCGTGAGGATTTCAGTGACA+TGG 0.578706 4_3:+61859607 Msa0653700:CDS
ATGTTAATAAGCCACGGAGG+AGG 0.579470 4_3:-61856346 None:intergenic
AGAGAAGGGTATGATGGTGG+AGG 0.580603 4_3:-61856462 None:intergenic
AGGTCAAAAGACAGATAGAG+TGG 0.585081 4_3:+61859401 Msa0653700:CDS
AGGAATTGAGAAAATCAGAC+AGG 0.586031 4_3:+61854843 Msa0653700:CDS
ATTCAAACATCAGTGGTACT+GGG 0.587907 4_3:+61857388 Msa0653700:CDS
GAAACGTTAGTGCATCAAAA+CGG 0.595200 4_3:+61852427 Msa0653700:CDS
CGGTAGATAAAACAAAACAT+TGG 0.596063 4_3:+61858401 Msa0653700:CDS
AGGCCGGGGATCTTCAGAGA+AGG 0.598863 4_3:-61856477 None:intergenic
CCTATAACTCTATATCGCAC+GGG 0.599060 4_3:+61852347 Msa0653700:five_prime_UTR
TCATGTGACTGAAAGGTCAC+GGG 0.600522 4_3:+61859754 Msa0653700:intron
TTGACCTTCGTAAGGAGCAG+AGG 0.605333 4_3:+61858947 Msa0653700:CDS
TGCTTCAGTATCGTCTTCGG+AGG 0.605349 4_3:-61852578 None:intergenic
AGCTGAAACAGATTAGCGCA+AGG 0.606301 4_3:+61854006 Msa0653700:CDS
TTGTTGAAGGACATTGTACA+CGG 0.606912 4_3:+61857357 Msa0653700:intron
CCGACCAAATCCCGCAACGA+TGG 0.607114 4_3:+61852399 Msa0653700:exon
GAAGTCAATGAAGTGAAAAG+GGG 0.609772 4_3:-61856682 None:intergenic
TTTCAGCACACCGACTGGGG+TGG 0.609891 4_3:+61858909 Msa0653700:intron
GGCCGGGGATCTTCAGAGAA+GGG 0.612888 4_3:-61856476 None:intergenic
TAATGATAAGAAGGATGAGT+CGG 0.614751 4_3:+61853763 Msa0653700:CDS
GTTCAACTTTGCAATTAGAG+GGG 0.615223 4_3:+61856808 Msa0653700:CDS
CCTTCGTAAGGAGCAGAGGA+AGG 0.617282 4_3:+61858951 Msa0653700:CDS
TCCGACAGTCGACAGTAGCA+GGG 0.617884 4_3:-61857587 None:intergenic
TTCAGAGAAGGGTATGATGG+TGG 0.620896 4_3:-61856465 None:intergenic
GAAGCTCTTGGTATGCCTGA+GGG 0.621141 4_3:+61856319 Msa0653700:CDS
ATAACCAAAACTAGCTCCTG+GGG 0.621290 4_3:-61856514 None:intergenic
AAGTCAATGAAGTGAAAAGG+GGG 0.621759 4_3:-61856681 None:intergenic
TTGGGGTGACTTGGAAGAGG+AGG 0.622268 4_3:+61858420 Msa0653700:CDS
CAAAACGGTGTCGTTTCCAA+CGG 0.624242 4_3:+61852442 Msa0653700:CDS
GGATGTCACTTTACTGCCAG+AGG 0.626847 4_3:+61859422 Msa0653700:CDS
CAGGTATAACGAAGCAAGGG+AGG 0.628202 4_3:+61859565 Msa0653700:intron
AGAAGCTCTTGGTATGCCTG+AGG 0.628417 4_3:+61856318 Msa0653700:CDS
AGCAGAGGAAGGAACCTGAA+AGG 0.633570 4_3:+61858962 Msa0653700:CDS
TTGCTGTGCAGGTAAAGTTG+AGG 0.634564 4_3:+61856260 Msa0653700:intron
TTGATGCACTAACGTTTCTG+CGG 0.636524 4_3:-61852422 None:intergenic
CTGAGGGTTCTCCTCCTCCG+TGG 0.646863 4_3:+61856335 Msa0653700:CDS
TTCCAGGTATAACGAAGCAA+GGG 0.647619 4_3:+61859562 Msa0653700:intron
TTTCAGTGACATGGTTGCTG+AGG 0.651024 4_3:+61859616 Msa0653700:CDS
TCAGGTGTCTCCACCCCAGT+CGG 0.652819 4_3:-61858919 None:intergenic
AGATCAGGACAGATCTTCAG+TGG 0.653924 4_3:+61857637 Msa0653700:CDS
ACGAATGGGATTAACCGAGA+GGG 0.656021 4_3:-61852372 None:intergenic
TTGCAGGTAAATGGAAGACG+TGG 0.661332 4_3:+61860029 Msa0653700:three_prime_UTR
AATCTGTTGATAGTATGTCA+AGG 0.663316 4_3:+61858521 Msa0653700:CDS
CTACTCATGTGATGATACGA+TGG 0.666091 4_3:+61860185 Msa0653700:three_prime_UTR
AAATGTACCTCATCAACAGG+AGG 0.667002 4_3:-61856558 None:intergenic
GGAAGAGGAAGAAGACATCG+AGG 0.667297 4_3:+61858474 Msa0653700:CDS
CACGAATGGGATTAACCGAG+AGG 0.667916 4_3:-61852373 None:intergenic
GAAATTACGGAGTCAGCGTG+AGG 0.668821 4_3:+61859592 Msa0653700:CDS
TGGTTCTATTCAAACATCAG+TGG 0.676712 4_3:+61857381 Msa0653700:CDS
ACTGGAGAATGAATCAAGTG+AGG 0.687111 4_3:-61857431 None:intergenic
GAAATACTGTACCTGTACCC+AGG 0.689923 4_3:+61854231 Msa0653700:CDS
AGAGGAAGAAGACATCGAGG+AGG 0.690665 4_3:+61858477 Msa0653700:CDS
TGAGAAATTTAGTTTCAGCG+AGG 0.695992 4_3:+61853643 Msa0653700:CDS
GGGCACCCAAGACAAGTCAG+GGG 0.712783 4_3:+61859262 Msa0653700:CDS
TGTCTTGTGGAAAATCAATG+TGG 0.722907 4_3:+61860356 Msa0653700:three_prime_UTR
GTAGATAAAACAAAACATTG+GGG 0.731406 4_3:+61858403 Msa0653700:CDS
TAACCAAAACTAGCTCCTGG+GGG 0.736524 4_3:-61856513 None:intergenic
TGCATGTTAATAAGCCACGG+AGG 0.791690 4_3:-61856349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCTTTTTCATTTTA+AGG + chr4_3:61854154-61854173 Msa0653700:intron 10.0%
!!! ATTTTTTTGTGTAATTTAAT+TGG + chr4_3:61854574-61854593 Msa0653700:intron 10.0%
!!! TTTTTTTGTGTAATTTAATT+GGG + chr4_3:61854575-61854594 Msa0653700:intron 10.0%
!!! TATTTTTCAAATATTTGTAA+AGG + chr4_3:61855912-61855931 Msa0653700:intron 10.0%
!! TTTATGTAAAATAATAATCA+TGG + chr4_3:61856611-61856630 Msa0653700:intron 10.0%
!! TTATGTAAAATAATAATCAT+GGG + chr4_3:61856612-61856631 Msa0653700:intron 10.0%
!! CAAAAAATAATTATAAAACT+AGG + chr4_3:61857188-61857207 Msa0653700:intron 10.0%
!! ATAATATAAATGTTGAAATT+TGG + chr4_3:61858094-61858113 Msa0653700:intron 10.0%
!! TAATATAAATGTTGAAATTT+GGG + chr4_3:61858095-61858114 Msa0653700:intron 10.0%
!! AATAATTAAGAAAAAACAAA+AGG - chr4_3:61858580-61858599 None:intergenic 10.0%
!! TTTAGCAAATATTAAATTTA+TGG - chr4_3:61858787-61858806 None:intergenic 10.0%
!!! CATTATTTTACAAAAAATTT+CGG + chr4_3:61859676-61859695 Msa0653700:intron 10.0%
!! AAATAAGCAAATAAAAAAAA+GGG - chr4_3:61859897-61859916 None:intergenic 10.0%
!! TAAATAAGCAAATAAAAAAA+AGG - chr4_3:61859898-61859917 None:intergenic 10.0%
!! ATTATTGAAAAAAATGCAAT+GGG - chr4_3:61852994-61853013 None:intergenic 15.0%
!! TATTATTGAAAAAAATGCAA+TGG - chr4_3:61852995-61853014 None:intergenic 15.0%
!!! ATATATAGATAAAACACTTT+TGG + chr4_3:61853198-61853217 Msa0653700:intron 15.0%
!!! AAAAAAGAAGAAAATTTTGA+GGG + chr4_3:61853237-61853256 Msa0653700:intron 15.0%
!! AGTATTAATTATATAGCATT+TGG - chr4_3:61853490-61853509 None:intergenic 15.0%
!! TAAAACTTTAAGCATAATTA+TGG - chr4_3:61853949-61853968 None:intergenic 15.0%
!!! ACATTCTAAATTGATAATTA+TGG + chr4_3:61854292-61854311 Msa0653700:intron 15.0%
!! AATAAAAGATAAATGATTCA+AGG - chr4_3:61854494-61854513 None:intergenic 15.0%
!! TTATTAATTATAAAACAGTG+AGG - chr4_3:61854691-61854710 None:intergenic 15.0%
!!! TTTTAATTGAAAGTCAAAAT+AGG + chr4_3:61856025-61856044 Msa0653700:intron 15.0%
!! AAAAAAATTGTATTTGACAA+AGG - chr4_3:61856136-61856155 None:intergenic 15.0%
!!! CAATTTTTTTTTTTTGTGAA+TGG + chr4_3:61856146-61856165 Msa0653700:intron 15.0%
!! ATTATATCGAAAATCATAAA+GGG - chr4_3:61856866-61856885 None:intergenic 15.0%
!! TATTATATCGAAAATCATAA+AGG - chr4_3:61856867-61856886 None:intergenic 15.0%
!!! ATTCATTTTATTTTTTGTTC+TGG + chr4_3:61857006-61857025 Msa0653700:intron 15.0%
!! AAACGGAAAAAAAATTAAAA+TGG - chr4_3:61857051-61857070 None:intergenic 15.0%
!!! TTAGTTTTATAATAGAGTAA+GGG - chr4_3:61857156-61857175 None:intergenic 15.0%
!!! AACGTTATATTTTATAAGAA+GGG - chr4_3:61858062-61858081 None:intergenic 15.0%
!!! AAACGTTATATTTTATAAGA+AGG - chr4_3:61858063-61858082 None:intergenic 15.0%
!! AAAAAATATAAATCCAAGAA+AGG - chr4_3:61858848-61858867 None:intergenic 15.0%
!!! TTTTATCATATTTTCTGTTA+AGG + chr4_3:61859060-61859079 Msa0653700:intron 15.0%
!!! TTTTTTGTAAAATAATGTAC+AGG - chr4_3:61859673-61859692 None:intergenic 15.0%
!! CTAGAAATTAATTGTGAAAT+TGG + chr4_3:61852711-61852730 Msa0653700:intron 20.0%
!!! GATTTTTATGATTCTTAATG+AGG + chr4_3:61852806-61852825 Msa0653700:intron 20.0%
!!! AATAATAATTTTTCCTCATG+TGG + chr4_3:61853008-61853027 Msa0653700:intron 20.0%
!!! ATAATAATTTTTCCTCATGT+GGG + chr4_3:61853009-61853028 Msa0653700:intron 20.0%
!!! CAAAAAAGAAGAAAATTTTG+AGG + chr4_3:61853236-61853255 Msa0653700:intron 20.0%
!!! AAAAAGAAGAAAATTTTGAG+GGG + chr4_3:61853238-61853257 Msa0653700:intron 20.0%
!! AAATGCTATTACAAAGAAAA+AGG + chr4_3:61853790-61853809 Msa0653700:CDS 20.0%
!! AAAAAACTGTTGCATAAAAT+TGG - chr4_3:61854140-61854159 None:intergenic 20.0%
!! TATTTCTTTATTAGATTGCA+TGG + chr4_3:61854510-61854529 Msa0653700:intron 20.0%
!! ATTTCTTTATTAGATTGCAT+GGG + chr4_3:61854511-61854530 Msa0653700:intron 20.0%
!!! AAACAATTTATTGATTTTGC+AGG + chr4_3:61854765-61854784 Msa0653700:intron 20.0%
!!! AACAATTTATTGATTTTGCA+GGG + chr4_3:61854766-61854785 Msa0653700:intron 20.0%
!!! TACACACTTTTTGTTTATAT+TGG + chr4_3:61855221-61855240 Msa0653700:intron 20.0%
!! AAATTAGAAAAAGGTAAAGA+GGG - chr4_3:61855534-61855553 None:intergenic 20.0%
!! AAAATTAGAAAAAGGTAAAG+AGG - chr4_3:61855535-61855554 None:intergenic 20.0%
!!! TTTTTTAAACCCGTAATTTA+AGG + chr4_3:61855803-61855822 Msa0653700:intron 20.0%
!! ACTAAATAGACCTTAAATTA+CGG - chr4_3:61855816-61855835 None:intergenic 20.0%
!!! TTTTTTTTTTTGTGAATGGT+TGG + chr4_3:61856150-61856169 Msa0653700:intron 20.0%
!!! TGAATTTTTGTTTTCATGAA+GGG + chr4_3:61856639-61856658 Msa0653700:intron 20.0%
!! TTTCAAACATCAATTGTAAA+GGG - chr4_3:61856898-61856917 None:intergenic 20.0%
!! GATAATGCATTTGAAAATTT+AGG + chr4_3:61856939-61856958 Msa0653700:intron 20.0%
!!! CTTAGTTTTATAATAGAGTA+AGG - chr4_3:61857157-61857176 None:intergenic 20.0%
!! TTGTTCCTATAATTCAATAA+TGG + chr4_3:61857223-61857242 Msa0653700:intron 20.0%
!!! ACGTTATATTTTATAAGAAG+GGG - chr4_3:61858061-61858080 None:intergenic 20.0%
!!! ATTATTTTTGTCAATAGTCT+AGG + chr4_3:61858594-61858613 Msa0653700:intron 20.0%
!!! TAGGTTCTTTTTATTTGTTT+TGG + chr4_3:61858613-61858632 Msa0653700:intron 20.0%
!! TCTATTTGCTTATTTAATGA+GGG + chr4_3:61859701-61859720 Msa0653700:intron 20.0%
!!! AAAAAAGACTTCAAGTTTTA+AGG + chr4_3:61859986-61860005 Msa0653700:CDS 20.0%
!!! TGTTGATTTTCTTTTGTTTC+CGG - chr4_3:61852531-61852550 None:intergenic 25.0%
!! ATCTTGAGTGAAATTTTAGA+GGG + chr4_3:61852859-61852878 Msa0653700:intron 25.0%
! TATTGAAAAATACGATGTGA+AGG - chr4_3:61853045-61853064 None:intergenic 25.0%
! AAACAAAAAATGACAACTCT+CGG + chr4_3:61853089-61853108 Msa0653700:intron 25.0%
! ATAATGTCAGTTGTATCTAA+TGG - chr4_3:61853163-61853182 None:intergenic 25.0%
! TTCCCAAACTAATAAATTCA+GGG - chr4_3:61853299-61853318 None:intergenic 25.0%
!! TAACCATTCCATTCAAATTT+TGG + chr4_3:61853382-61853401 Msa0653700:intron 25.0%
! AAATACGCATAACTATCAAT+TGG - chr4_3:61853513-61853532 None:intergenic 25.0%
!! TGTCATCTGTCTTAAATTTT+AGG + chr4_3:61853538-61853557 Msa0653700:intron 25.0%
! TGTTTGATAAATTGTTTGCT+TGG + chr4_3:61853728-61853747 Msa0653700:intron 25.0%
!! TATCTAGGATAATGATAAGA+AGG + chr4_3:61853754-61853773 Msa0653700:intron 25.0%
! TTGGTATACGTGTTATATAT+TGG + chr4_3:61854045-61854064 Msa0653700:intron 25.0%
! GACTCAAAAAAATCTACAAT+TGG - chr4_3:61854076-61854095 None:intergenic 25.0%
!!! TTCTTTTTCATTTTAAGGTG+TGG + chr4_3:61854159-61854178 Msa0653700:intron 25.0%
!!! TCTTTTTCATTTTAAGGTGT+GGG + chr4_3:61854160-61854179 Msa0653700:intron 25.0%
! TTCTCTTATATGTATGTATG+TGG + chr4_3:61854403-61854422 Msa0653700:intron 25.0%
! TGGGCATTTATTTATAACTA+AGG + chr4_3:61854594-61854613 Msa0653700:intron 25.0%
!!! ACAATTTATTGATTTTGCAG+GGG + chr4_3:61854767-61854786 Msa0653700:intron 25.0%
! TAATTTGATGTGTGTCTATT+TGG + chr4_3:61854975-61854994 Msa0653700:intron 25.0%
! TTGCTAATTAATTCAACAAC+TGG + chr4_3:61855045-61855064 Msa0653700:intron 25.0%
!!! TTACTGTTGTTTCAAAATCA+TGG + chr4_3:61855071-61855090 Msa0653700:intron 25.0%
! GTGTCATAAGACAAATTATT+GGG + chr4_3:61855093-61855112 Msa0653700:intron 25.0%
! TGTCATAAGACAAATTATTG+GGG + chr4_3:61855094-61855113 Msa0653700:intron 25.0%
!!! TGATTTTTAATTGTTAGCTG+TGG + chr4_3:61855122-61855141 Msa0653700:intron 25.0%
! TGAGAAAATGTAAGATAACT+TGG - chr4_3:61855406-61855425 None:intergenic 25.0%
! AAAAGTTGAAACAAAAGCAA+CGG + chr4_3:61855456-61855475 Msa0653700:CDS 25.0%
! AATGGTGCAAAATTAGAAAA+AGG - chr4_3:61855543-61855562 None:intergenic 25.0%
! CTAAATAGACCTTAAATTAC+GGG - chr4_3:61855815-61855834 None:intergenic 25.0%
! TGCAAATTAAAAGTGAATAC+AGG - chr4_3:61855864-61855883 None:intergenic 25.0%
!! TCCACTTCGTTTTATATTTT+CGG - chr4_3:61855992-61856011 None:intergenic 25.0%
! CATAGTTTCTCAAACTAAAT+AGG + chr4_3:61856058-61856077 Msa0653700:intron 25.0%
!!! CTGAATTTTTGTTTTCATGA+AGG + chr4_3:61856638-61856657 Msa0653700:intron 25.0%
!!! GAATTTTTGTTTTCATGAAG+GGG + chr4_3:61856640-61856659 Msa0653700:intron 25.0%
!! AAACTTTGGAGGATTATATA+GGG - chr4_3:61856843-61856862 None:intergenic 25.0%
! AAAATCATAAAGGGAAACTT+TGG - chr4_3:61856857-61856876 None:intergenic 25.0%
! GTTTCAAACATCAATTGTAA+AGG - chr4_3:61856899-61856918 None:intergenic 25.0%
!! TACAATTGATGTTTGAAACT+AGG + chr4_3:61856900-61856919 Msa0653700:intron 25.0%
!! TTTTCAAATGCATTATCCAA+AGG - chr4_3:61856936-61856955 None:intergenic 25.0%
! ATTATGAAACTACATTTCCT+GGG - chr4_3:61857826-61857845 None:intergenic 25.0%
! AATTAAAATTCCACCAAAAC+AGG - chr4_3:61857853-61857872 None:intergenic 25.0%
!!! ATTTTAATTTCCTTGTGCTT+TGG + chr4_3:61857864-61857883 Msa0653700:intron 25.0%
!!! TTTTAATTTCCTTGTGCTTT+GGG + chr4_3:61857865-61857884 Msa0653700:intron 25.0%
! AAACAGTGTTTGAATTAGAT+CGG - chr4_3:61857903-61857922 None:intergenic 25.0%
!! TATTTTATAAGAAGGGGATT+CGG - chr4_3:61858055-61858074 None:intergenic 25.0%
! TCTTTGTTAATACACAACAT+AGG + chr4_3:61858311-61858330 Msa0653700:intron 25.0%
! CATGTATGTAAAATGTAACT+AGG - chr4_3:61858360-61858379 None:intergenic 25.0%
!!! CAATGTTTTGTTTTATCTAC+CGG - chr4_3:61858403-61858422 None:intergenic 25.0%
! GGTAGATAAAACAAAACATT+GGG + chr4_3:61858402-61858421 Msa0653700:CDS 25.0%
! GTAGATAAAACAAAACATTG+GGG + chr4_3:61858403-61858422 Msa0653700:CDS 25.0%
! TACAGAGAGAATTATAAACA+TGG - chr4_3:61858815-61858834 None:intergenic 25.0%
! GTATTTATAATAGCCTTTCT+TGG + chr4_3:61858832-61858851 Msa0653700:intron 25.0%
! GTATTGTATCTTGATAAACT+CGG + chr4_3:61859206-61859225 Msa0653700:intron 25.0%
! CTCTATTTGCTTATTTAATG+AGG + chr4_3:61859700-61859719 Msa0653700:intron 25.0%
!!! AAACTTGAAGTCTTTTTTCT+TGG - chr4_3:61859984-61860003 None:intergenic 25.0%
!!! GCATGTTGTTTTTATTGTTT+TGG + chr4_3:61860151-61860170 Msa0653700:three_prime_UTR 25.0%
! ATGATTTACATCTTATGTTC+TGG + chr4_3:61860287-61860306 Msa0653700:three_prime_UTR 25.0%
GTTATAGGAAGAATTCAGTT+TGG - chr4_3:61852335-61852354 None:intergenic 30.0%
!! CTTATTCTTTGAGATCACTT+TGG + chr4_3:61852658-61852677 Msa0653700:intron 30.0%
GTTAGGTTTACAATCGAAAT+TGG + chr4_3:61852680-61852699 Msa0653700:intron 30.0%
GAAGCTTGATTAATCATTAG+TGG + chr4_3:61852830-61852849 Msa0653700:intron 30.0%
! GATCTTGAGTGAAATTTTAG+AGG + chr4_3:61852858-61852877 Msa0653700:intron 30.0%
TTGAAAAAAATGCAATGGGA+AGG - chr4_3:61852990-61853009 None:intergenic 30.0%
AACAAAAAATGACAACTCTC+GGG + chr4_3:61853090-61853109 Msa0653700:intron 30.0%
!!! GAGTTTATTTTGCAAGTGAA+TGG - chr4_3:61853129-61853148 None:intergenic 30.0%
TCACTTGCAAAATAAACTCT+TGG + chr4_3:61853130-61853149 Msa0653700:intron 30.0%
AGATACAACTGACATTATTC+AGG + chr4_3:61853165-61853184 Msa0653700:intron 30.0%
GATACAACTGACATTATTCA+GGG + chr4_3:61853166-61853185 Msa0653700:intron 30.0%
TCCCAAACTAATAAATTCAG+GGG - chr4_3:61853298-61853317 None:intergenic 30.0%
CTTCCCAAACTAATAAATTC+AGG - chr4_3:61853300-61853319 None:intergenic 30.0%
GAATGGAATGGTTACAAAAA+TGG - chr4_3:61853376-61853395 None:intergenic 30.0%
TAGCCAAAATTTGAATGGAA+TGG - chr4_3:61853388-61853407 None:intergenic 30.0%
ACTAGTAGCCAAAATTTGAA+TGG - chr4_3:61853393-61853412 None:intergenic 30.0%
! CTCTTTTATCAAAGGAAATG+TGG - chr4_3:61853444-61853463 None:intergenic 30.0%
CATTTCCTTTGATAAAAGAG+TGG + chr4_3:61853444-61853463 Msa0653700:intron 30.0%
AGTTGAAATTGAGTATGTAC+CGG + chr4_3:61853571-61853590 Msa0653700:CDS 30.0%
TAATGATAAGAAGGATGAGT+CGG + chr4_3:61853763-61853782 Msa0653700:CDS 30.0%
AGTCTCAAACAAGAAGAAAA+AGG + chr4_3:61853865-61853884 Msa0653700:CDS 30.0%
CAGACTAAAAAGTAAGAATG+AGG - chr4_3:61854098-61854117 None:intergenic 30.0%
!!! CTCATTCTTACTTTTTAGTC+TGG + chr4_3:61854096-61854115 Msa0653700:intron 30.0%
TTGCATAAAATTGGCACAAT+GGG - chr4_3:61854131-61854150 None:intergenic 30.0%
TTCAAGAATACCAACAACTT+TGG - chr4_3:61854203-61854222 None:intergenic 30.0%
TCAAAAGAGAAAATTTCTGC+AGG + chr4_3:61854262-61854281 Msa0653700:CDS 30.0%
TTATGGTCAACTAATGTATG+TGG + chr4_3:61854341-61854360 Msa0653700:intron 30.0%
TATGGTCAACTAATGTATGT+GGG + chr4_3:61854342-61854361 Msa0653700:intron 30.0%
TTAGGAAGATAACATCGATA+TGG + chr4_3:61854379-61854398 Msa0653700:intron 30.0%
TATTAGATTGCATGGGAATA+TGG + chr4_3:61854518-61854537 Msa0653700:intron 30.0%
ATTAGATTGCATGGGAATAT+GGG + chr4_3:61854519-61854538 Msa0653700:intron 30.0%
! AATATGGGTGTTGTATAACA+TGG + chr4_3:61854534-61854553 Msa0653700:intron 30.0%
! ATATGGGTGTTGTATAACAT+GGG + chr4_3:61854535-61854554 Msa0653700:intron 30.0%
ATAAAATCAGGAAGCTGAAA+AGG - chr4_3:61854814-61854833 None:intergenic 30.0%
GAATATTACTTTCCTCTAGT+GGG - chr4_3:61854919-61854938 None:intergenic 30.0%
! GGTGTCATAAGACAAATTAT+TGG + chr4_3:61855092-61855111 Msa0653700:intron 30.0%
! AATATTGATTGTCTTCTGAC+TGG + chr4_3:61855245-61855264 Msa0653700:intron 30.0%
AGTAAAATGAACAACAGATG+TGG - chr4_3:61855291-61855310 None:intergenic 30.0%
AAAGTTGAAACAAAAGCAAC+GGG + chr4_3:61855457-61855476 Msa0653700:CDS 30.0%
! GAAGATGGATATTGATTATC+AGG + chr4_3:61855502-61855521 Msa0653700:CDS 30.0%
AAGTATGCAAGCTAAGAAAA+TGG - chr4_3:61855561-61855580 None:intergenic 30.0%
AAACAAAGTCACTTGAGAAA+GGG - chr4_3:61855616-61855635 None:intergenic 30.0%
TCATGAAGGAAAAGAATTTG+AGG + chr4_3:61855713-61855732 Msa0653700:CDS 30.0%
TCCGAAAATATAAAACGAAG+TGG + chr4_3:61855988-61856007 Msa0653700:intron 30.0%
GTGAGAAAAAAAACAGCAAA+TGG - chr4_3:61856084-61856103 None:intergenic 30.0%
!! TTTGTGAATGGTTGGTTTAA+AGG + chr4_3:61856158-61856177 Msa0653700:intron 30.0%
TTTACACTTAAACAGACCAA+TGG - chr4_3:61856216-61856235 None:intergenic 30.0%
GGAAAACAGATGAAATTGTA+AGG - chr4_3:61856425-61856444 None:intergenic 30.0%
!!! GTTTTCCTTTTTCAGAGATA+CGG + chr4_3:61856438-61856457 Msa0653700:intron 30.0%
AAAAAATGTACCTCATCAAC+AGG - chr4_3:61856564-61856583 None:intergenic 30.0%
AGAAGTCAATGAAGTGAAAA+GGG - chr4_3:61856686-61856705 None:intergenic 30.0%
AAGAAGTCAATGAAGTGAAA+AGG - chr4_3:61856687-61856706 None:intergenic 30.0%
TGTAAACCAACCTCATAATT+AGG - chr4_3:61856783-61856802 None:intergenic 30.0%
AAGTTCAACTTTGCAATTAG+AGG + chr4_3:61856806-61856825 Msa0653700:CDS 30.0%
AGTTCAACTTTGCAATTAGA+GGG + chr4_3:61856807-61856826 Msa0653700:CDS 30.0%
! GAAACTTTGGAGGATTATAT+AGG - chr4_3:61856844-61856863 None:intergenic 30.0%
! GTTTGAAACTAGGTTATGTT+TGG + chr4_3:61856910-61856929 Msa0653700:intron 30.0%
TGGCTCCATTATTGAATTAT+AGG - chr4_3:61857231-61857250 None:intergenic 30.0%
! TCAAATTTACCTCTTTTCAC+TGG - chr4_3:61857452-61857471 None:intergenic 30.0%
TTACTTAGTTTCTGTGATGA+GGG + chr4_3:61857611-61857630 Msa0653700:CDS 30.0%
GATTATGAAACTACATTTCC+TGG - chr4_3:61857827-61857846 None:intergenic 30.0%
! TTTCATAATCTCACCTGTTT+TGG + chr4_3:61857837-61857856 Msa0653700:intron 30.0%
AACAGTGTTTGAATTAGATC+GGG - chr4_3:61857902-61857921 None:intergenic 30.0%
ATATCAAGTGAATGTCAGTT+TGG - chr4_3:61857950-61857969 None:intergenic 30.0%
! ATTTTGTCGAGAAACTGTTA+TGG + chr4_3:61857970-61857989 Msa0653700:intron 30.0%
ATCTCTCTTTCTTTCTGATA+TGG + chr4_3:61858002-61858021 Msa0653700:intron 30.0%
TCTCTCTTTCTTTCTGATAT+GGG + chr4_3:61858003-61858022 Msa0653700:intron 30.0%
GTAAAATGTAACTAGGAATC+TGG - chr4_3:61858353-61858372 None:intergenic 30.0%
CGGTAGATAAAACAAAACAT+TGG + chr4_3:61858401-61858420 Msa0653700:CDS 30.0%
!! AATCTGTTGATAGTATGTCA+AGG + chr4_3:61858521-61858540 Msa0653700:CDS 30.0%
GCATAGTAAATGACTAATTG+AGG + chr4_3:61858640-61858659 Msa0653700:intron 30.0%
! GTTTTTCCTCTTTTTCTTCA+AGG - chr4_3:61859087-61859106 None:intergenic 30.0%
AATACTTGTGAGGGAAAAAA+AGG - chr4_3:61859191-61859210 None:intergenic 30.0%
TCAAGATACAATACTTGTGA+GGG - chr4_3:61859200-61859219 None:intergenic 30.0%
ATCAAGATACAATACTTGTG+AGG - chr4_3:61859201-61859220 None:intergenic 30.0%
! AGTTTCTTGCTCCTTTTTAT+GGG + chr4_3:61859305-61859324 Msa0653700:intron 30.0%
!! TAACGTGTTTTATTGTTTCC+AGG + chr4_3:61859365-61859384 Msa0653700:intron 30.0%
TATAAAACAGAAGTCATACC+TGG - chr4_3:61859478-61859497 None:intergenic 30.0%
ACGATGTTAACATCATTAAC+GGG - chr4_3:61859512-61859531 None:intergenic 30.0%
CACGATGTTAACATCATTAA+CGG - chr4_3:61859513-61859532 None:intergenic 30.0%
TATTTAATGAGGGATAACCT+TGG + chr4_3:61859711-61859730 Msa0653700:intron 30.0%
AAATAAAAAAAAGGGCAACC+CGG - chr4_3:61859889-61859908 None:intergenic 30.0%
!!! CTTCAAGTTTTAAGGTTGTT+CGG + chr4_3:61859994-61860013 Msa0653700:exon 30.0%
CATTTACCTGCAAAATAAAG+AGG - chr4_3:61860022-61860041 None:intergenic 30.0%
!!! CTCTTTATTTTGCAGGTAAA+TGG + chr4_3:61860020-61860039 Msa0653700:three_prime_UTR 30.0%
ATCCAAGTATGTCTCATTAA+CGG - chr4_3:61860269-61860288 None:intergenic 30.0%
GGTTCAAATTTAGTCCATTT+AGG + chr4_3:61860308-61860327 Msa0653700:three_prime_UTR 30.0%
CAAGTTGCTAAACACAGAAA+TGG + chr4_3:61852287-61852306 Msa0653700:five_prime_UTR 35.0%
TCCTATAACTCTATATCGCA+CGG + chr4_3:61852346-61852365 Msa0653700:five_prime_UTR 35.0%
GAAACGTTAGTGCATCAAAA+CGG + chr4_3:61852427-61852446 Msa0653700:CDS 35.0%
!!! GCTTTCCCGAGATTTTTTTA+CGG - chr4_3:61852491-61852510 None:intergenic 35.0%
GAAAATCAACAAAGCCTCTA+AGG + chr4_3:61852540-61852559 Msa0653700:CDS 35.0%
! TTTTGCTTCAGTATCGTCTT+CGG - chr4_3:61852584-61852603 None:intergenic 35.0%
ACATCAACAACAACAACAAC+AGG + chr4_3:61852624-61852643 Msa0653700:CDS 35.0%
!! TCTTTGAGATCACTTTGGTT+AGG + chr4_3:61852663-61852682 Msa0653700:intron 35.0%
!! TAATTTGCTACAGCGAAGTT+AGG + chr4_3:61852751-61852770 Msa0653700:intron 35.0%
!! AATTTGCTACAGCGAAGTTA+GGG + chr4_3:61852752-61852771 Msa0653700:intron 35.0%
GCTTGATTAATCATTAGTGG+TGG + chr4_3:61852833-61852852 Msa0653700:intron 35.0%
TGATTAATCATTAGTGGTGG+TGG + chr4_3:61852836-61852855 Msa0653700:intron 35.0%
! AAGAACGAGTTTGTGCATTT+TGG + chr4_3:61852917-61852936 Msa0653700:intron 35.0%
!! AAGAAGAAAATTTTGAGGGG+TGG + chr4_3:61853241-61853260 Msa0653700:intron 35.0%
AGCCCCTGAATTTATTAGTT+TGG + chr4_3:61853293-61853312 Msa0653700:intron 35.0%
! GCCCCTGAATTTATTAGTTT+GGG + chr4_3:61853294-61853313 Msa0653700:intron 35.0%
AGCCTTTGATCTATTAACCT+TGG + chr4_3:61853318-61853337 Msa0653700:intron 35.0%
! CAATGCCACTCTTTTATCAA+AGG - chr4_3:61853452-61853471 None:intergenic 35.0%
! TAGCATTTGGTAACTTAAGC+TGG - chr4_3:61853477-61853496 None:intergenic 35.0%
!!! TCATATAGCTCTGCTTTTTC+CGG - chr4_3:61853593-61853612 None:intergenic 35.0%
GAAAAAGCAGAGCTATATGA+AGG + chr4_3:61853593-61853612 Msa0653700:CDS 35.0%
! TGAGAAATTTAGTTTCAGCG+AGG + chr4_3:61853643-61853662 Msa0653700:CDS 35.0%
TTGTTTGCTTGGATGTATCT+AGG + chr4_3:61853739-61853758 Msa0653700:intron 35.0%
GATAACGAGCAAAAAGAGAA+AGG + chr4_3:61853842-61853861 Msa0653700:CDS 35.0%
GTTGCATAAAATTGGCACAA+TGG - chr4_3:61854132-61854151 None:intergenic 35.0%
AGAGAAAATTTCTGCAGGTT+AGG + chr4_3:61854267-61854286 Msa0653700:intron 35.0%
TAGAGATGTAAACATGTTCG+AGG + chr4_3:61854317-61854336 Msa0653700:intron 35.0%
AGAGATGTAAACATGTTCGA+GGG + chr4_3:61854318-61854337 Msa0653700:intron 35.0%
ACTAATGTATGTGGGATGTA+TGG + chr4_3:61854350-61854369 Msa0653700:intron 35.0%
TATAAAACAGTGAGGCCAAT+TGG - chr4_3:61854683-61854702 None:intergenic 35.0%
! TCTGATTTTCTCAATTCCTG+TGG - chr4_3:61854842-61854861 None:intergenic 35.0%
AGGAATTGAGAAAATCAGAC+AGG + chr4_3:61854843-61854862 Msa0653700:CDS 35.0%
GGAATATTACTTTCCTCTAG+TGG - chr4_3:61854920-61854939 None:intergenic 35.0%
! ACTTCTACACTCTTCTGAAA+TGG + chr4_3:61855006-61855025 Msa0653700:intron 35.0%
AATGAACAACAGATGTGGAT+CGG - chr4_3:61855286-61855305 None:intergenic 35.0%
! TATCTTACATTTTCTCACGC+AGG + chr4_3:61855409-61855428 Msa0653700:intron 35.0%
! ATATCCATCTTCCCCATTTT+TGG - chr4_3:61855494-61855513 None:intergenic 35.0%
GAAACAAAGTCACTTGAGAA+AGG - chr4_3:61855617-61855636 None:intergenic 35.0%
! TCTCAAGTGACTTTGTTTCT+TGG + chr4_3:61855618-61855637 Msa0653700:intron 35.0%
TGTATTTGACAAAGGAGACA+TGG - chr4_3:61856128-61856147 None:intergenic 35.0%
ACATTGTTCTAACACCTTCA+TGG + chr4_3:61856183-61856202 Msa0653700:intron 35.0%
CATTGTTCTAACACCTTCAT+GGG + chr4_3:61856184-61856203 Msa0653700:intron 35.0%
CACAGCAAGCAATATAACAA+TGG - chr4_3:61856248-61856267 None:intergenic 35.0%
AAGTCAATGAAGTGAAAAGG+GGG - chr4_3:61856684-61856703 None:intergenic 35.0%
GAAGTCAATGAAGTGAAAAG+GGG - chr4_3:61856685-61856704 None:intergenic 35.0%
CCAAAAACATCTCCATAAAG+TGG - chr4_3:61856741-61856760 None:intergenic 35.0%
! CCACTTTATGGAGATGTTTT+TGG + chr4_3:61856738-61856757 Msa0653700:CDS 35.0%
GTTCAACTTTGCAATTAGAG+GGG + chr4_3:61856808-61856827 Msa0653700:CDS 35.0%
ATCATAAAGGGAAACTTTGG+AGG - chr4_3:61856854-61856873 None:intergenic 35.0%
ATCTATTCACTCTGAGCAAA+CGG - chr4_3:61857068-61857087 None:intergenic 35.0%
!!! ACGATTGTTGCTTTTGTTGA+AGG + chr4_3:61857344-61857363 Msa0653700:intron 35.0%
TTGTTGAAGGACATTGTACA+CGG + chr4_3:61857357-61857376 Msa0653700:intron 35.0%
! TGGTTCTATTCAAACATCAG+TGG + chr4_3:61857381-61857400 Msa0653700:CDS 35.0%
TATTCAAACATCAGTGGTAC+TGG + chr4_3:61857387-61857406 Msa0653700:CDS 35.0%
ATTCAAACATCAGTGGTACT+GGG + chr4_3:61857388-61857407 Msa0653700:CDS 35.0%
ATTCATTCTCCAGTGAAAAG+AGG + chr4_3:61857440-61857459 Msa0653700:CDS 35.0%
GACATTAATGCCATCATAAC+AGG - chr4_3:61857488-61857507 None:intergenic 35.0%
GTTACTTAGTTTCTGTGATG+AGG + chr4_3:61857610-61857629 Msa0653700:CDS 35.0%
!!! TGTAGAAACACTGTTTTGGT+GGG + chr4_3:61857713-61857732 Msa0653700:intron 35.0%
GTATCATACGTGCAAATGAT+GGG + chr4_3:61857792-61857811 Msa0653700:intron 35.0%
TATTACTCCTCTTCAAGTCT+AGG + chr4_3:61858552-61858571 Msa0653700:intron 35.0%
AAGTTTAAGAACCCATCATG+TGG + chr4_3:61858665-61858684 Msa0653700:intron 35.0%
GACTAAATTAGCCACATGAT+GGG - chr4_3:61858679-61858698 None:intergenic 35.0%
TGACTAAATTAGCCACATGA+TGG - chr4_3:61858680-61858699 None:intergenic 35.0%
AGAAATGAGCGCACAAATAA+AGG - chr4_3:61858876-61858895 None:intergenic 35.0%
TTACGAAGGTCAATAACATC+AGG - chr4_3:61858940-61858959 None:intergenic 35.0%
TGATGTTATTGACCTTCGTA+AGG + chr4_3:61858939-61858958 Msa0653700:CDS 35.0%
GAAAGACTCACTTGATAAAG+AGG - chr4_3:61858988-61859007 None:intergenic 35.0%
TAAGGTCCTTGAAGAAAAAG+AGG + chr4_3:61859078-61859097 Msa0653700:intron 35.0%
! GAGTTTCTTGCTCCTTTTTA+TGG + chr4_3:61859304-61859323 Msa0653700:intron 35.0%
! GTTTCTTGCTCCTTTTTATG+GGG + chr4_3:61859306-61859325 Msa0653700:intron 35.0%
! TTTCTTGCTCCTTTTTATGG+GGG + chr4_3:61859307-61859326 Msa0653700:intron 35.0%
CGTTATCCCACAAGAAAATA+CGG - chr4_3:61859350-61859369 None:intergenic 35.0%
!! TTCCAGGTTGATTTGCTTAA+AGG + chr4_3:61859381-61859400 Msa0653700:intron 35.0%
ACATCTGCTAAAACTATTCC+AGG + chr4_3:61859546-61859565 Msa0653700:intron 35.0%
GTACAGGTCTATATGATTTG+AGG - chr4_3:61859657-61859676 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr4_3:61859798-61859817 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr4_3:61859797-61859816 Msa0653700:intron 35.0%
AAGAGGAAGCAAGAAAAAGA+TGG + chr4_3:61859953-61859972 Msa0653700:CDS 35.0%
ATCCGTTAATGAGACATACT+TGG + chr4_3:61860264-61860283 Msa0653700:three_prime_UTR 35.0%
TTTGGGCAAAAACTCCTAAA+TGG - chr4_3:61860325-61860344 None:intergenic 35.0%
! TTTAGGAGTTTTTGCCCAAA+AGG + chr4_3:61860325-61860344 Msa0653700:three_prime_UTR 35.0%
! TTAGGAGTTTTTGCCCAAAA+GGG + chr4_3:61860326-61860345 Msa0653700:three_prime_UTR 35.0%
! AAGACATATGCATCCCTTTT+GGG - chr4_3:61860342-61860361 None:intergenic 35.0%
TGTCTTGTGGAAAATCAATG+TGG + chr4_3:61860356-61860375 Msa0653700:three_prime_UTR 35.0%
GCGCGTGTAAGAAAGTTATT+GGG - chr4_3:61852313-61852332 None:intergenic 40.0%
CCTATAACTCTATATCGCAC+GGG + chr4_3:61852347-61852366 Msa0653700:five_prime_UTR 40.0%
ATTTGGTCGGATTCACGAAT+GGG - chr4_3:61852389-61852408 None:intergenic 40.0%
TTGATGCACTAACGTTTCTG+CGG - chr4_3:61852425-61852444 None:intergenic 40.0%
!!! TTTTTTTACGGTGGCGGTTT+TGG - chr4_3:61852479-61852498 None:intergenic 40.0%
!!! TTCCCGAGATTTTTTTACGG+TGG - chr4_3:61852488-61852507 None:intergenic 40.0%
!! TTTTCTTTTGTTTCCGGCGA+CGG - chr4_3:61852525-61852544 None:intergenic 40.0%
GGCCAAGGTTAATAGATCAA+AGG - chr4_3:61853323-61853342 None:intergenic 40.0%
GAAATCAAAGAGAATGGCCA+AGG - chr4_3:61853338-61853357 None:intergenic 40.0%
GTCGCAGAAATCAAAGAGAA+TGG - chr4_3:61853344-61853363 None:intergenic 40.0%
TTCAGCAGATCCAAAGTTGT+TGG + chr4_3:61854190-61854209 Msa0653700:CDS 40.0%
TGGGTACAGGTACAGTATTT+CGG - chr4_3:61854232-61854251 None:intergenic 40.0%
GTAAACATGTTCGAGGGTTA+TGG + chr4_3:61854324-61854343 Msa0653700:intron 40.0%
TGGGATGTATGGATAGAGTT+AGG + chr4_3:61854361-61854380 Msa0653700:intron 40.0%
TGTATGTATGTGGTACTTGC+AGG + chr4_3:61854413-61854432 Msa0653700:intron 40.0%
GTATGTATGTGGTACTTGCA+GGG + chr4_3:61854414-61854433 Msa0653700:intron 40.0%
TATGTATGTGGTACTTGCAG+GGG + chr4_3:61854415-61854434 Msa0653700:intron 40.0%
TGCATGACTATGAGGTTATG+TGG - chr4_3:61854720-61854739 None:intergenic 40.0%
TTTGTGTGTGCATGACTATG+AGG - chr4_3:61854728-61854747 None:intergenic 40.0%
! TTGATTTTGCAGGGGAAAAG+AGG + chr4_3:61854775-61854794 Msa0653700:intron 40.0%
ACGTTATCATTCTGTCTGTG+TGG + chr4_3:61854890-61854909 Msa0653700:intron 40.0%
TATTACTTTCCTCTAGTGGG+TGG - chr4_3:61854916-61854935 None:intergenic 40.0%
AGTAATATTCCAAGAGAGCG+TGG + chr4_3:61854929-61854948 Msa0653700:intron 40.0%
!! CTCTTCTGAAATGGCTTTCA+TGG + chr4_3:61855015-61855034 Msa0653700:intron 40.0%
GCAGGCTTATATTGAGAAAG+AGG + chr4_3:61855427-61855446 Msa0653700:intron 40.0%
GAACGCATGCAACCAAAAAT+GGG + chr4_3:61855479-61855498 Msa0653700:CDS 40.0%
AACGCATGCAACCAAAAATG+GGG + chr4_3:61855480-61855499 Msa0653700:CDS 40.0%
! GACTTTGTTTCTTGGTTGTC+AGG + chr4_3:61855626-61855645 Msa0653700:intron 40.0%
CATACATACATGCAGCATAG+TGG + chr4_3:61855778-61855797 Msa0653700:intron 40.0%
!! ATGGAAGTATCCACTACTCA+AGG - chr4_3:61856109-61856128 None:intergenic 40.0%
!! TGTTATATTGCTTGCTGTGC+AGG + chr4_3:61856249-61856268 Msa0653700:intron 40.0%
AACTCATGTGATAACATGCC+AGG - chr4_3:61856295-61856314 None:intergenic 40.0%
! CATGAGTTGAAAGAAGCTCT+TGG + chr4_3:61856307-61856326 Msa0653700:CDS 40.0%
ACCTGCATGTTAATAAGCCA+CGG - chr4_3:61856355-61856374 None:intergenic 40.0%
TGCAGGTAAAATCAGTGTCT+TGG + chr4_3:61856368-61856387 Msa0653700:intron 40.0%
! ATCTTCAGAGAAGGGTATGA+TGG - chr4_3:61856471-61856490 None:intergenic 40.0%
ATAACCAAAACTAGCTCCTG+GGG - chr4_3:61856517-61856536 None:intergenic 40.0%
GATAACCAAAACTAGCTCCT+GGG - chr4_3:61856518-61856537 None:intergenic 40.0%
TGATAACCAAAACTAGCTCC+TGG - chr4_3:61856519-61856538 None:intergenic 40.0%
!!! GCTAGTTTTGGTTATCATCC+TGG + chr4_3:61856522-61856541 Msa0653700:CDS 40.0%
!!! AGTTTTGGTTATCATCCTGG+TGG + chr4_3:61856525-61856544 Msa0653700:CDS 40.0%
AAATGTACCTCATCAACAGG+AGG - chr4_3:61856561-61856580 None:intergenic 40.0%
AATTAGGCTGATCTTGCTGA+TGG - chr4_3:61856767-61856786 None:intergenic 40.0%
GCAAGATCAGCCTAATTATG+AGG + chr4_3:61856770-61856789 Msa0653700:CDS 40.0%
GATCAGCCTAATTATGAGGT+TGG + chr4_3:61856774-61856793 Msa0653700:CDS 40.0%
! ACTAGGTTATGTTTGGCCTT+TGG + chr4_3:61856917-61856936 Msa0653700:intron 40.0%
ACTGGAGAATGAATCAAGTG+AGG - chr4_3:61857434-61857453 None:intergenic 40.0%
TGCCATCATAACAGGCTTTA+GGG - chr4_3:61857480-61857499 None:intergenic 40.0%
ATGCCATCATAACAGGCTTT+AGG - chr4_3:61857481-61857500 None:intergenic 40.0%
GATTTCCAGCAATATCCCAA+TGG - chr4_3:61857538-61857557 None:intergenic 40.0%
!! CAATGTGTTGCTTGGAGTTA+CGG + chr4_3:61857665-61857684 Msa0653700:CDS 40.0%
! CAGTGTTTCTACAGGTGTTA+TGG - chr4_3:61857706-61857725 None:intergenic 40.0%
! CACCTGTAGAAACACTGTTT+TGG + chr4_3:61857709-61857728 Msa0653700:intron 40.0%
! CACCAAAACAGTGTTTCTAC+AGG - chr4_3:61857714-61857733 None:intergenic 40.0%
!! CTGTAGAAACACTGTTTTGG+TGG + chr4_3:61857712-61857731 Msa0653700:intron 40.0%
! CAGTGTTTCTACAGGAGTTA+TGG - chr4_3:61857755-61857774 None:intergenic 40.0%
! CTCCTGTAGAAACACTGTTT+TGG + chr4_3:61857758-61857777 Msa0653700:intron 40.0%
!! CTGTAGAAACACTGTTTTGG+CGG + chr4_3:61857712-61857731 Msa0653700:intron 40.0%
!!! TGTAGAAACACTGTTTTGGC+GGG + chr4_3:61857762-61857781 Msa0653700:intron 40.0%
GGTATCATACGTGCAAATGA+TGG + chr4_3:61857791-61857810 Msa0653700:intron 40.0%
!! CATAATCTCACCTGTTTTGG+TGG + chr4_3:61857840-61857859 Msa0653700:intron 40.0%
! CTTTTAACACCCAAAGCACA+AGG - chr4_3:61857877-61857896 None:intergenic 40.0%
TCAAGTGAATGTCAGTTTGG+AGG - chr4_3:61857947-61857966 None:intergenic 40.0%
CAGCAGTTTCAAAACAGAAG+AGG - chr4_3:61858030-61858049 None:intergenic 40.0%
TTTGTATTCACGACAGAGAG+CGG - chr4_3:61858149-61858168 None:intergenic 40.0%
TCTCTGTCGTGAATACAAAG+AGG + chr4_3:61858150-61858169 Msa0653700:intron 40.0%
TGTCGTGAATACAAAGAGGA+TGG + chr4_3:61858154-61858173 Msa0653700:intron 40.0%
GTCGTGAATACAAAGAGGAT+GGG + chr4_3:61858155-61858174 Msa0653700:intron 40.0%
!! TGGCACTGAATGGGTATTTT+TGG + chr4_3:61858178-61858197 Msa0653700:intron 40.0%
!! GGCACTGAATGGGTATTTTT+GGG + chr4_3:61858179-61858198 Msa0653700:intron 40.0%
!! GCACTGAATGGGTATTTTTG+GGG + chr4_3:61858180-61858199 Msa0653700:intron 40.0%
!!! ATGGGTATTTTTGGGGAGTT+TGG + chr4_3:61858187-61858206 Msa0653700:intron 40.0%
!!! TGGGTATTTTTGGGGAGTTT+GGG + chr4_3:61858188-61858207 Msa0653700:intron 40.0%
! AGTCTGGTAACGAGAGTTAT+TGG - chr4_3:61858270-61858289 None:intergenic 40.0%
AGAACTCAGAAAACAGAGTC+TGG - chr4_3:61858286-61858305 None:intergenic 40.0%
! GACTCTGTTTTCTGAGTTCT+AGG + chr4_3:61858286-61858305 Msa0653700:intron 40.0%
CATACATGTTCTCACAATGC+AGG + chr4_3:61858372-61858391 Msa0653700:intron 40.0%
AACAAAACATTGGGGTGACT+TGG + chr4_3:61858411-61858430 Msa0653700:CDS 40.0%
AAAGGAACCTAGACTTGAAG+AGG - chr4_3:61858562-61858581 None:intergenic 40.0%
TAACCACGTGAATGTTTCAC+TGG + chr4_3:61858760-61858779 Msa0653700:intron 40.0%
ACTTGATAAAGAGGCCTTTC+AGG - chr4_3:61858979-61858998 None:intergenic 40.0%
! AAAGAGGAAAAACTTGCTCC+TGG + chr4_3:61859094-61859113 Msa0653700:CDS 40.0%
TCCATTTCTCTCCAGTTATG+TGG + chr4_3:61859232-61859251 Msa0653700:intron 40.0%
ACCACATAACTGGAGAGAAA+TGG - chr4_3:61859236-61859255 None:intergenic 40.0%
TTTCTCTCCAGTTATGTGGT+TGG + chr4_3:61859236-61859255 Msa0653700:intron 40.0%
! TTCTTGCTCCTTTTTATGGG+GGG + chr4_3:61859308-61859327 Msa0653700:intron 40.0%
! CTTTTTATGGGGGGTAAAGA+GGG + chr4_3:61859317-61859336 Msa0653700:intron 40.0%
! TTTTTATGGGGGGTAAAGAG+GGG + chr4_3:61859318-61859337 Msa0653700:intron 40.0%
! CATGTGCCGTATTTTCTTGT+GGG + chr4_3:61859341-61859360 Msa0653700:intron 40.0%
GACCTTTAAGCAAATCAACC+TGG - chr4_3:61859386-61859405 None:intergenic 40.0%
AGGTCAAAAGACAGATAGAG+TGG + chr4_3:61859401-61859420 Msa0653700:CDS 40.0%
! TGGAGAACGTTTTACATACC+AGG + chr4_3:61859457-61859476 Msa0653700:CDS 40.0%
ATTCCAGGTATAACGAAGCA+AGG + chr4_3:61859561-61859580 Msa0653700:intron 40.0%
TTCCAGGTATAACGAAGCAA+GGG + chr4_3:61859562-61859581 Msa0653700:intron 40.0%
CAAGGGAGGAAGAGAAATTA+CGG + chr4_3:61859579-61859598 Msa0653700:CDS 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr4_3:61859747-61859766 Msa0653700:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr4_3:61859791-61859810 Msa0653700:CDS 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr4_3:61859792-61859811 Msa0653700:CDS 40.0%
CGTACAATACACCAAATGGT+GGG + chr4_3:61859823-61859842 Msa0653700:intron 40.0%
TCTTCTCATTCTGCATCAGA+TGG - chr4_3:61859928-61859947 None:intergenic 40.0%
TGATGCAGAATGAGAAGAAG+AGG + chr4_3:61859930-61859949 Msa0653700:intron 40.0%
AGAATGAGAAGAAGAGGAAG+AGG + chr4_3:61859936-61859955 Msa0653700:intron 40.0%
!!! TCGGTTCCTCTTTATTTTGC+AGG + chr4_3:61860013-61860032 Msa0653700:three_prime_UTR 40.0%
CTACTCATGTGATGATACGA+TGG + chr4_3:61860185-61860204 Msa0653700:three_prime_UTR 40.0%
CTGACACGTTCTTCTGTATA+AGG - chr4_3:61860214-61860233 None:intergenic 40.0%
! CAAGACATATGCATCCCTTT+TGG - chr4_3:61860343-61860362 None:intergenic 40.0%
AAAGGGATGCATATGTCTTG+TGG + chr4_3:61860343-61860362 Msa0653700:three_prime_UTR 40.0%
GGCGCGTGTAAGAAAGTTAT+TGG - chr4_3:61852314-61852333 None:intergenic 45.0%
CCCGTGCGATATAGAGTTAT+AGG - chr4_3:61852350-61852369 None:intergenic 45.0%
ACGAATGGGATTAACCGAGA+GGG - chr4_3:61852375-61852394 None:intergenic 45.0%
! GATTTGGTCGGATTCACGAA+TGG - chr4_3:61852390-61852409 None:intergenic 45.0%
!! CAAAACGGTGTCGTTTCCAA+CGG + chr4_3:61852442-61852461 Msa0653700:CDS 45.0%
!!! CCGAGATTTTTTTACGGTGG+CGG - chr4_3:61852485-61852504 None:intergenic 45.0%
CCGCCACCGTAAAAAAATCT+CGG + chr4_3:61852482-61852501 Msa0653700:CDS 45.0%
CGCCACCGTAAAAAAATCTC+GGG + chr4_3:61852483-61852502 Msa0653700:CDS 45.0%
! GTTTGCGTTTGGTTCCTTAG+AGG - chr4_3:61852557-61852576 None:intergenic 45.0%
!! GTTTGTGCATTTTGGCGTAG+TGG + chr4_3:61852925-61852944 Msa0653700:intron 45.0%
!! GAAAATTTTGAGGGGTGGCA+TGG + chr4_3:61853246-61853265 Msa0653700:intron 45.0%
TCAGGGGCTAACATTCTCTA+AGG - chr4_3:61853282-61853301 None:intergenic 45.0%
AGCAGAGCTATATGAAGGCT+TGG + chr4_3:61853598-61853617 Msa0653700:CDS 45.0%
GCTATATGAAGGCTTGGATG+AGG + chr4_3:61853604-61853623 Msa0653700:CDS 45.0%
!! CAGCGAGGTTATTGATTCAG+AGG + chr4_3:61853658-61853677 Msa0653700:CDS 45.0%
TTTGTGTTCAGCTTCAACGC+AGG + chr4_3:61853970-61853989 Msa0653700:intron 45.0%
AGCTGAAACAGATTAGCGCA+AGG + chr4_3:61854006-61854025 Msa0653700:CDS 45.0%
ATACCAACCTCGACAACATC+AGG - chr4_3:61854032-61854051 None:intergenic 45.0%
GAAATACTGTACCTGTACCC+AGG + chr4_3:61854231-61854250 Msa0653700:CDS 45.0%
ATCACCAAGCCTGGAATTGT+AGG + chr4_3:61854451-61854470 Msa0653700:intron 45.0%
AACACCTACAATTCCAGGCT+TGG - chr4_3:61854458-61854477 None:intergenic 45.0%
TGGCAAACACCTACAATTCC+AGG - chr4_3:61854463-61854482 None:intergenic 45.0%
AATGATTCAAGGCCACTCAG+TGG - chr4_3:61854483-61854502 None:intergenic 45.0%
CTTTCACTGTGCTTAATGCC+CGG + chr4_3:61854649-61854668 Msa0653700:intron 45.0%
TTTCACTGTGCTTAATGCCC+GGG + chr4_3:61854650-61854669 Msa0653700:intron 45.0%
GACTATGAGGTTATGTGGTC+AGG - chr4_3:61854715-61854734 None:intergenic 45.0%
CCTGTGGCAGCAATAAAATC+AGG - chr4_3:61854826-61854845 None:intergenic 45.0%
! CCTGATTTTATTGCTGCCAC+AGG + chr4_3:61854823-61854842 Msa0653700:CDS 45.0%
TTACACAAACCACGCTCTCT+TGG - chr4_3:61854941-61854960 None:intergenic 45.0%
GGAACGCATGCAACCAAAAA+TGG + chr4_3:61855478-61855497 Msa0653700:CDS 45.0%
GCAACCAAAAATGGGGAAGA+TGG + chr4_3:61855487-61855506 Msa0653700:CDS 45.0%
!! ATGACAGCTTTGGCTTTGTC+TGG - chr4_3:61855677-61855696 None:intergenic 45.0%
AAGCCAAAGCTGTCATCTCT+TGG + chr4_3:61855681-61855700 Msa0653700:CDS 45.0%
AGCCAAAGCTGTCATCTCTT+GGG + chr4_3:61855682-61855701 Msa0653700:CDS 45.0%
CTTGGGGACTTGTATCATGA+AGG + chr4_3:61855699-61855718 Msa0653700:CDS 45.0%
TTTCTCACCTCCTTGAGTAG+TGG + chr4_3:61856096-61856115 Msa0653700:intron 45.0%
! GAAGTATCCACTACTCAAGG+AGG - chr4_3:61856106-61856125 None:intergenic 45.0%
CCAATGGACAAATCCCATGA+AGG - chr4_3:61856200-61856219 None:intergenic 45.0%
CCTTCATGGGATTTGTCCAT+TGG + chr4_3:61856197-61856216 Msa0653700:intron 45.0%
TTGCTGTGCAGGTAAAGTTG+AGG + chr4_3:61856260-61856279 Msa0653700:intron 45.0%
TGCTGTGCAGGTAAAGTTGA+GGG + chr4_3:61856261-61856280 Msa0653700:intron 45.0%
AAGTTGAGGGAGATGAAACC+TGG + chr4_3:61856274-61856293 Msa0653700:CDS 45.0%
ATGTTAATAAGCCACGGAGG+AGG - chr4_3:61856349-61856368 None:intergenic 45.0%
TGCATGTTAATAAGCCACGG+AGG - chr4_3:61856352-61856371 None:intergenic 45.0%
TCCGTGGCTTATTAACATGC+AGG + chr4_3:61856351-61856370 Msa0653700:CDS 45.0%
! GAGGACCGTATCTCTGAAAA+AGG - chr4_3:61856446-61856465 None:intergenic 45.0%
! TTCAGAGAAGGGTATGATGG+TGG - chr4_3:61856468-61856487 None:intergenic 45.0%
TAACCAAAACTAGCTCCTGG+GGG - chr4_3:61856516-61856535 None:intergenic 45.0%
TGAAGTGAAAAGGGGGATGA+GGG - chr4_3:61856677-61856696 None:intergenic 45.0%
ATGAAGTGAAAAGGGGGATG+AGG - chr4_3:61856678-61856697 None:intergenic 45.0%
TGTCTGCATCTTGAGCAGTT+CGG + chr4_3:61856711-61856730 Msa0653700:CDS 45.0%
! GGTCGACTCTCAGATATTCT+TGG + chr4_3:61857291-61857310 Msa0653700:intron 45.0%
GTCCCTAAAGCCTGTTATGA+TGG + chr4_3:61857475-61857494 Msa0653700:intron 45.0%
ATTAATGTCCCTCCCGAAGT+TGG + chr4_3:61857499-61857518 Msa0653700:intron 45.0%
ATCCCAATGGACAGAAGTGA+CGG - chr4_3:61857525-61857544 None:intergenic 45.0%
TCTGTCCATTGGGATATTGC+TGG + chr4_3:61857530-61857549 Msa0653700:intron 45.0%
CTGTGATGAGGGTAAAGATC+AGG + chr4_3:61857622-61857641 Msa0653700:CDS 45.0%
AGATCAGGACAGATCTTCAG+TGG + chr4_3:61857637-61857656 Msa0653700:CDS 45.0%
GTGTTATGGTCTCTCCTGTA+GGG - chr4_3:61857692-61857711 None:intergenic 45.0%
!!! TGTTTTGGTGGGAAGATAGC+AGG + chr4_3:61857724-61857743 Msa0653700:intron 45.0%
! CGCCAAAACAGTGTTTCTAC+AGG - chr4_3:61857763-61857782 None:intergenic 45.0%
TTGTATTCACGACAGAGAGC+GGG - chr4_3:61858148-61858167 None:intergenic 45.0%
GTGAATACAAAGAGGATGGG+TGG + chr4_3:61858158-61858177 Msa0653700:intron 45.0%
!! ATTTTTGGGGAGTTTGGGTG+TGG + chr4_3:61858193-61858212 Msa0653700:intron 45.0%
!! TTTGTTTTCAGCACACCGAC+TGG + chr4_3:61858904-61858923 Msa0653700:intron 45.0%
!! TTGTTTTCAGCACACCGACT+GGG + chr4_3:61858905-61858924 Msa0653700:intron 45.0%
GTAGTTCCAAGCAAAGTTCC+AGG - chr4_3:61859115-61859134 None:intergenic 45.0%
!! TTTTGCCCCTGACTTGTCTT+GGG - chr4_3:61859270-61859289 None:intergenic 45.0%
!! TTTTTGCCCCTGACTTGTCT+TGG - chr4_3:61859271-61859290 None:intergenic 45.0%
AAGACAAGTCAGGGGCAAAA+AGG + chr4_3:61859270-61859289 Msa0653700:CDS 45.0%
AGACAAGTCAGGGGCAAAAA+GGG + chr4_3:61859271-61859290 Msa0653700:CDS 45.0%
CCTCTTTACCCCCCATAAAA+AGG - chr4_3:61859319-61859338 None:intergenic 45.0%
! CCTTTTTATGGGGGGTAAAG+AGG + chr4_3:61859316-61859335 Msa0653700:intron 45.0%
! GCATGTGCCGTATTTTCTTG+TGG + chr4_3:61859340-61859359 Msa0653700:intron 45.0%
TTTCAGTGACATGGTTGCTG+AGG + chr4_3:61859616-61859635 Msa0653700:CDS 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr4_3:61859753-61859772 Msa0653700:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr4_3:61859754-61859773 Msa0653700:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr4_3:61859787-61859806 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr4_3:61859819-61859838 Msa0653700:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr4_3:61859822-61859841 Msa0653700:intron 45.0%
TTGCAGGTAAATGGAAGACG+TGG + chr4_3:61860029-61860048 Msa0653700:three_prime_UTR 45.0%
! TCATTTTCCATGAGCAGCAG+AGG + chr4_3:61860075-61860094 Msa0653700:three_prime_UTR 45.0%
!! ATAATAAATTGAAAATAAAA+TGG - chr4_3:61855893-61855912 None:intergenic 5.0%
!!! TATTTGATTTTTATTTATTT+TGG - chr4_3:61857133-61857152 None:intergenic 5.0%
!!! TATAATTTTTTTATAGTATT+TGG + chr4_3:61859155-61859174 Msa0653700:intron 5.0%
CACGAATGGGATTAACCGAG+AGG - chr4_3:61852376-61852395 None:intergenic 50.0%
GTCGTTTCCAACGGAGATCT+TGG + chr4_3:61852451-61852470 Msa0653700:CDS 50.0%
! TTTGGAGCCAAGATCTCCGT+TGG - chr4_3:61852461-61852480 None:intergenic 50.0%
TGCTTCAGTATCGTCTTCGG+AGG - chr4_3:61852581-61852600 None:intergenic 50.0%
! GGGGCTAACATTCTCTAAGG+AGG - chr4_3:61853279-61853298 None:intergenic 50.0%
! GGCAGACTCTGATTCTGAAG+AGG + chr4_3:61853811-61853830 Msa0653700:CDS 50.0%
! CTCTTTTGACACCAGTGCCT+GGG - chr4_3:61854251-61854270 None:intergenic 50.0%
! TCTCTTTTGACACCAGTGCC+TGG - chr4_3:61854252-61854271 None:intergenic 50.0%
TGTAGGTGTTTGCCACTGAG+TGG + chr4_3:61854468-61854487 Msa0653700:intron 50.0%
CGGGCATTAAGCACAGTGAA+AGG - chr4_3:61854651-61854670 None:intergenic 50.0%
AGGCCAATTGGAATTCAGCC+CGG - chr4_3:61854671-61854690 None:intergenic 50.0%
GCCAAAGCTGTCATCTCTTG+GGG + chr4_3:61855683-61855702 Msa0653700:CDS 50.0%
TCCCCAAGAGATGACAGCTT+TGG - chr4_3:61855687-61855706 None:intergenic 50.0%
AGAAGCTCTTGGTATGCCTG+AGG + chr4_3:61856318-61856337 Msa0653700:CDS 50.0%
GAAGCTCTTGGTATGCCTGA+GGG + chr4_3:61856319-61856338 Msa0653700:CDS 50.0%
!! AGAGAAGGGTATGATGGTGG+AGG - chr4_3:61856465-61856484 None:intergenic 50.0%
! TACCCTTCTCTGAAGATCCC+CGG + chr4_3:61856474-61856493 Msa0653700:CDS 50.0%
AAACTAGCTCCTGGGGGAAT+GGG - chr4_3:61856510-61856529 None:intergenic 50.0%
AAAACTAGCTCCTGGGGGAA+TGG - chr4_3:61856511-61856530 None:intergenic 50.0%
!! ATTCCCCCAGGAGCTAGTTT+TGG + chr4_3:61856510-61856529 Msa0653700:CDS 50.0%
TTGGTTATCATCCTGGTGGC+TGG + chr4_3:61856529-61856548 Msa0653700:CDS 50.0%
TGGTTATCATCCTGGTGGCT+GGG + chr4_3:61856530-61856549 Msa0653700:CDS 50.0%
AAGTGAAAAGGGGGATGAGG+GGG - chr4_3:61856675-61856694 None:intergenic 50.0%
GAAGTGAAAAGGGGGATGAG+GGG - chr4_3:61856676-61856695 None:intergenic 50.0%
GTCTGCATCTTGAGCAGTTC+GGG + chr4_3:61856712-61856731 Msa0653700:CDS 50.0%
! TGAGGACTTGTTCTCCGATG+CGG + chr4_3:61857270-61857289 Msa0653700:intron 50.0%
TATCTGAGAGTCGACCGCAT+CGG - chr4_3:61857287-61857306 None:intergenic 50.0%
TGAAGGACATTGTACACGGC+TGG + chr4_3:61857361-61857380 Msa0653700:intron 50.0%
ACAGAAGTGACGGCCAACTT+CGG - chr4_3:61857515-61857534 None:intergenic 50.0%
! TGGCACTGCAATGTGTTGCT+TGG + chr4_3:61857657-61857676 Msa0653700:CDS 50.0%
! GGTGTTATGGTCTCTCCTGT+AGG - chr4_3:61857693-61857712 None:intergenic 50.0%
!!! CACTGTTTTGGCGGGAAGAT+AGG + chr4_3:61857770-61857789 Msa0653700:intron 50.0%
! AATGATGGGAAGTGAGACCC+AGG + chr4_3:61857806-61857825 Msa0653700:intron 50.0%
!! CAGAGAGCGGGGTATTGTTT+CGG - chr4_3:61858136-61858155 None:intergenic 50.0%
TGTATTCACGACAGAGAGCG+GGG - chr4_3:61858147-61858166 None:intergenic 50.0%
AAGCAGACTCCTTTGCCAAG+TGG - chr4_3:61858225-61858244 None:intergenic 50.0%
TCTCACAATGCAGGAAGAGC+CGG + chr4_3:61858381-61858400 Msa0653700:intron 50.0%
! ACATTGGGGTGACTTGGAAG+AGG + chr4_3:61858417-61858436 Msa0653700:CDS 50.0%
! TGACTTGGAAGAGGAGGAAG+AGG + chr4_3:61858426-61858445 Msa0653700:CDS 50.0%
GGAGGAAGAAGAGGAAGAAG+AGG + chr4_3:61858450-61858469 Msa0653700:CDS 50.0%
GGAAGAAGAGGAAGAAGAGG+AGG + chr4_3:61858453-61858472 Msa0653700:CDS 50.0%
AGAGGAAGAAGAGGAGGAAG+AGG + chr4_3:61858459-61858478 Msa0653700:CDS 50.0%
GGAAGAGGAAGAAGACATCG+AGG + chr4_3:61858474-61858493 Msa0653700:CDS 50.0%
AGAGGAAGAAGACATCGAGG+AGG + chr4_3:61858477-61858496 Msa0653700:CDS 50.0%
GGACCAGTGAAACATTCACG+TGG - chr4_3:61858766-61858785 None:intergenic 50.0%
!! TGTTTTCAGCACACCGACTG+GGG + chr4_3:61858906-61858925 Msa0653700:intron 50.0%
TTGACCTTCGTAAGGAGCAG+AGG + chr4_3:61858947-61858966 Msa0653700:CDS 50.0%
AGCAGAGGAAGGAACCTGAA+AGG + chr4_3:61858962-61858981 Msa0653700:CDS 50.0%
CTTGCTCCTGGAACTTTGCT+TGG + chr4_3:61859106-61859125 Msa0653700:CDS 50.0%
CTCCAGTTATGTGGTTGGCA+CGG + chr4_3:61859241-61859260 Msa0653700:intron 50.0%
TCCAGTTATGTGGTTGGCAC+GGG + chr4_3:61859242-61859261 Msa0653700:intron 50.0%
!! GGATGTCACTTTACTGCCAG+AGG + chr4_3:61859422-61859441 Msa0653700:CDS 50.0%
CACTTTACTGCCAGAGGAGT+TGG + chr4_3:61859428-61859447 Msa0653700:CDS 50.0%
TCCATGACATCCAACTCCTC+TGG - chr4_3:61859441-61859460 None:intergenic 50.0%
CTCCCTTGCTTCGTTATACC+TGG - chr4_3:61859567-61859586 None:intergenic 50.0%
CAGGTATAACGAAGCAAGGG+AGG + chr4_3:61859565-61859584 Msa0653700:intron 50.0%
GAAATTACGGAGTCAGCGTG+AGG + chr4_3:61859592-61859611 Msa0653700:CDS 50.0%
GCGTGAGGATTTCAGTGACA+TGG + chr4_3:61859607-61859626 Msa0653700:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr4_3:61859731-61859750 None:intergenic 50.0%
TTCCATGAGCAGCAGAGGAT+TGG + chr4_3:61860080-61860099 Msa0653700:three_prime_UTR 50.0%
ATATCGCACGGGAACCCTCT+CGG + chr4_3:61852358-61852377 Msa0653700:five_prime_UTR 55.0%
! CCATCGTTGCGGGATTTGGT+CGG - chr4_3:61852402-61852421 None:intergenic 55.0%
!! TCTTCGGAGGCGTTTGCGTT+TGG - chr4_3:61852568-61852587 None:intergenic 55.0%
GGATCAAACTCGCCCACATG+AGG - chr4_3:61853024-61853043 None:intergenic 55.0%
AGGCCTGATGTTGTCGAGGT+TGG + chr4_3:61854026-61854045 Msa0653700:intron 55.0%
TACTTGCAGGGGAGCAGTTG+TGG + chr4_3:61854426-61854445 Msa0653700:intron 55.0%
GTTGTGGCAATCACCAAGCC+TGG + chr4_3:61854442-61854461 Msa0653700:intron 55.0%
TGCCCGGGCTGAATTCCAAT+TGG + chr4_3:61854665-61854684 Msa0653700:intron 55.0%
GGCCAATTGGAATTCAGCCC+GGG - chr4_3:61854670-61854689 None:intergenic 55.0%
GGTTATCATCCTGGTGGCTG+GGG + chr4_3:61856531-61856550 Msa0653700:CDS 55.0%
CAGTTCGGGCGTCCACTTTA+TGG + chr4_3:61856726-61856745 Msa0653700:CDS 55.0%
CAGAAGTGACGGCCAACTTC+GGG - chr4_3:61857514-61857533 None:intergenic 55.0%
TGGCCGTCACTTCTGTCCAT+TGG + chr4_3:61857519-61857538 Msa0653700:intron 55.0%
GGCCGTCACTTCTGTCCATT+GGG + chr4_3:61857520-61857539 Msa0653700:intron 55.0%
! ACCCTGCTACTGTCGACTGT+CGG + chr4_3:61857586-61857605 Msa0653700:CDS 55.0%
TCCGACAGTCGACAGTAGCA+GGG - chr4_3:61857590-61857609 None:intergenic 55.0%
CTTGGAGTTACGGTCCCTAC+AGG + chr4_3:61857675-61857694 Msa0653700:CDS 55.0%
! AGAGGATGGGTGGCACTGAA+TGG + chr4_3:61858168-61858187 Msa0653700:intron 55.0%
! GAGGATGGGTGGCACTGAAT+GGG + chr4_3:61858169-61858188 Msa0653700:intron 55.0%
! TGGCTGTTGCCACTTGGCAA+AGG + chr4_3:61858213-61858232 Msa0653700:intron 55.0%
! TTGGGGTGACTTGGAAGAGG+AGG + chr4_3:61858420-61858439 Msa0653700:CDS 55.0%
CTTGGAAGAGGAGGAAGAGG+AGG + chr4_3:61858429-61858448 Msa0653700:CDS 55.0%
GGAAGAGGAGGAGGAAGAAG+AGG + chr4_3:61858441-61858460 Msa0653700:CDS 55.0%
GGAAGAAGACATCGAGGAGG+AGG + chr4_3:61858480-61858499 Msa0653700:CDS 55.0%
!! GAGGAGGAGGCACTTGAAGA+TGG + chr4_3:61858493-61858512 Msa0653700:CDS 55.0%
CCTTCCTCTGCTCCTTACGA+AGG - chr4_3:61858954-61858973 None:intergenic 55.0%
CCTTCGTAAGGAGCAGAGGA+AGG + chr4_3:61858951-61858970 Msa0653700:CDS 55.0%
GCCAGAGGAGTTGGATGTCA+TGG + chr4_3:61859437-61859456 Msa0653700:CDS 55.0%
AGGGATAACCTTGGCGCAAC+TGG + chr4_3:61859720-61859739 Msa0653700:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr4_3:61859766-61859785 Msa0653700:intron 55.0%
CTAAAGCTCCCGCATACGCA+AGG - chr4_3:61859862-61859881 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr4_3:61859867-61859886 Msa0653700:intron 55.0%
AGCCAATCCTCTGCTGCTCA+TGG - chr4_3:61860085-61860104 None:intergenic 55.0%
CCGACCAAATCCCGCAACGA+TGG + chr4_3:61852399-61852418 Msa0653700:exon 60.0%
GTTTCTGCGGCCATCGTTGC+GGG - chr4_3:61852412-61852431 None:intergenic 60.0%
CGTTTCTGCGGCCATCGTTG+CGG - chr4_3:61852413-61852432 None:intergenic 60.0%
TCGCTACCGTGTACCTCACG+TGG + chr4_3:61852953-61852972 Msa0653700:intron 60.0%
CGCTACCGTGTACCTCACGT+GGG + chr4_3:61852954-61852973 Msa0653700:intron 60.0%
TACCGTGTACCTCACGTGGG+CGG + chr4_3:61852957-61852976 Msa0653700:intron 60.0%
CGCAAGGCCTGATGTTGTCG+AGG + chr4_3:61854022-61854041 Msa0653700:CDS 60.0%
CTGTACCTGTACCCAGGCAC+TGG + chr4_3:61854237-61854256 Msa0653700:CDS 60.0%
TGACACCAGTGCCTGGGTAC+AGG - chr4_3:61854245-61854264 None:intergenic 60.0%
TCTGTGTGGCCACCCACTAG+AGG + chr4_3:61854904-61854923 Msa0653700:intron 60.0%
GGCCGGGGATCTTCAGAGAA+GGG - chr4_3:61856479-61856498 None:intergenic 60.0%
AGGCCGGGGATCTTCAGAGA+AGG - chr4_3:61856480-61856499 None:intergenic 60.0%
!! GAATGGGAGCATTCAGGCCG+GGG - chr4_3:61856494-61856513 None:intergenic 60.0%
!! GGAATGGGAGCATTCAGGCC+GGG - chr4_3:61856495-61856514 None:intergenic 60.0%
!! GGGAATGGGAGCATTCAGGC+CGG - chr4_3:61856496-61856515 None:intergenic 60.0%
!! CTGGGGGAATGGGAGCATTC+AGG - chr4_3:61856500-61856519 None:intergenic 60.0%
CTGAATGCTCCCATTCCCCC+AGG + chr4_3:61856498-61856517 Msa0653700:CDS 60.0%
GGGCAAGCCTCCTGTTGATG+AGG + chr4_3:61856551-61856570 Msa0653700:CDS 60.0%
AGTGACGGCCAACTTCGGGA+GGG - chr4_3:61857510-61857529 None:intergenic 60.0%
AAGTGACGGCCAACTTCGGG+AGG - chr4_3:61857511-61857530 None:intergenic 60.0%
CTCCGACAGTCGACAGTAGC+AGG - chr4_3:61857591-61857610 None:intergenic 60.0%
TGGGTGTGGCTGTTGCCACT+TGG + chr4_3:61858207-61858226 Msa0653700:intron 60.0%
GGAAGAGGAGGAAGAGGAGG+AGG + chr4_3:61858432-61858451 Msa0653700:CDS 60.0%
! TTTCAGCACACCGACTGGGG+TGG + chr4_3:61858909-61858928 Msa0653700:intron 60.0%
TCAGGTGTCTCCACCCCAGT+CGG - chr4_3:61858922-61858941 None:intergenic 60.0%
GCCCGTGCCAACCACATAAC+TGG - chr4_3:61859246-61859265 None:intergenic 60.0%
ACGGGCACCCAAGACAAGTC+AGG + chr4_3:61859260-61859279 Msa0653700:CDS 60.0%
CGGGCACCCAAGACAAGTCA+GGG + chr4_3:61859261-61859280 Msa0653700:CDS 60.0%
GGGCACCCAAGACAAGTCAG+GGG + chr4_3:61859262-61859281 Msa0653700:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr4_3:61859835-61859854 Msa0653700:intron 60.0%
CATACGCAAGGTCCGGGAAG+GGG - chr4_3:61859850-61859869 None:intergenic 60.0%
GCATACGCAAGGTCCGGGAA+GGG - chr4_3:61859851-61859870 None:intergenic 60.0%
CTTCCCGGACCTTGCGTATG+CGG + chr4_3:61859850-61859869 Msa0653700:intron 60.0%
TTCCCGGACCTTGCGTATGC+GGG + chr4_3:61859851-61859870 Msa0653700:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr4_3:61859868-61859887 Msa0653700:intron 60.0%
GCGGCCATCGTTGCGGGATT+TGG - chr4_3:61852406-61852425 None:intergenic 65.0%
ACCGTGTACCTCACGTGGGC+GGG + chr4_3:61852958-61852977 Msa0653700:intron 65.0%
ACCCGCCCACGTGAGGTACA+CGG - chr4_3:61852962-61852981 None:intergenic 65.0%
GGATTGAACCCGCCCACGTG+AGG - chr4_3:61852969-61852988 None:intergenic 65.0%
CACGGAGGAGGAGAACCCTC+AGG - chr4_3:61856337-61856356 None:intergenic 65.0%
CTGAGGGTTCTCCTCCTCCG+TGG + chr4_3:61856335-61856354 Msa0653700:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_3:61859837-61859856 None:intergenic 65.0%
CGCATACGCAAGGTCCGGGA+AGG - chr4_3:61859852-61859871 None:intergenic 65.0%
CTCCCGCATACGCAAGGTCC+GGG - chr4_3:61859856-61859875 None:intergenic 65.0%
GCTCCCGCATACGCAAGGTC+CGG - chr4_3:61859857-61859876 None:intergenic 65.0%
GTTTCCGGCGACGGCGACGA+CGG - chr4_3:61852516-61852535 None:intergenic 70.0%
GGAGGCTTGCCCCAGCCACC+AGG - chr4_3:61856543-61856562 None:intergenic 75.0%
! GCGACCGTCGTCGCCGTCGC+CGG + chr4_3:61852509-61852528 Msa0653700:CDS 80.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 61852264 61860384 61852264 ID=Msa0653700;Name=Msa0653700
chr4_3 mRNA 61852264 61860384 61852264 ID=Msa0653700-mRNA-1;Parent=Msa0653700;Name=Msa0653700-mRNA-1;_AED=0.20;_eAED=0.22;_QI=154|0.7|0.80|0.85|1|1|21|378|718
chr4_3 exon 61852264 61852645 61852264 ID=Msa0653700-mRNA-1:exon:17001;Parent=Msa0653700-mRNA-1
chr4_3 exon 61853560 61853679 61853560 ID=Msa0653700-mRNA-1:exon:17002;Parent=Msa0653700-mRNA-1
chr4_3 exon 61853761 61853886 61853761 ID=Msa0653700-mRNA-1:exon:17003;Parent=Msa0653700-mRNA-1
chr4_3 exon 61853981 61854043 61853981 ID=Msa0653700-mRNA-1:exon:17004;Parent=Msa0653700-mRNA-1
chr4_3 exon 61854176 61854283 61854176 ID=Msa0653700-mRNA-1:exon:17005;Parent=Msa0653700-mRNA-1
chr4_3 exon 61854787 61854864 61854787 ID=Msa0653700-mRNA-1:exon:17006;Parent=Msa0653700-mRNA-1
chr4_3 exon 61855431 61855523 61855431 ID=Msa0653700-mRNA-1:exon:17007;Parent=Msa0653700-mRNA-1
chr4_3 exon 61855648 61855734 61855648 ID=Msa0653700-mRNA-1:exon:17008;Parent=Msa0653700-mRNA-1
chr4_3 exon 61856271 61856372 61856271 ID=Msa0653700-mRNA-1:exon:17009;Parent=Msa0653700-mRNA-1
chr4_3 exon 61856453 61856572 61856453 ID=Msa0653700-mRNA-1:exon:17010;Parent=Msa0653700-mRNA-1
chr4_3 exon 61856660 61856829 61856660 ID=Msa0653700-mRNA-1:exon:17011;Parent=Msa0653700-mRNA-1
chr4_3 exon 61857366 61857461 61857366 ID=Msa0653700-mRNA-1:exon:17012;Parent=Msa0653700-mRNA-1
chr4_3 exon 61857560 61857713 61857560 ID=Msa0653700-mRNA-1:exon:17013;Parent=Msa0653700-mRNA-1
chr4_3 exon 61858394 61858542 61858394 ID=Msa0653700-mRNA-1:exon:17014;Parent=Msa0653700-mRNA-1
chr4_3 exon 61858915 61858996 61858915 ID=Msa0653700-mRNA-1:exon:17015;Parent=Msa0653700-mRNA-1
chr4_3 exon 61859082 61859140 61859082 ID=Msa0653700-mRNA-1:exon:17016;Parent=Msa0653700-mRNA-1
chr4_3 exon 61859247 61859292 61859247 ID=Msa0653700-mRNA-1:exon:17017;Parent=Msa0653700-mRNA-1
chr4_3 exon 61859387 61859478 61859387 ID=Msa0653700-mRNA-1:exon:17018;Parent=Msa0653700-mRNA-1
chr4_3 exon 61859568 61859637 61859568 ID=Msa0653700-mRNA-1:exon:17019;Parent=Msa0653700-mRNA-1
chr4_3 exon 61859769 61859813 61859769 ID=Msa0653700-mRNA-1:exon:17020;Parent=Msa0653700-mRNA-1
chr4_3 exon 61859938 61860384 61859938 ID=Msa0653700-mRNA-1:exon:17021;Parent=Msa0653700-mRNA-1
chr4_3 five_prime_UTR 61852264 61852417 61852264 ID=Msa0653700-mRNA-1:five_prime_utr;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61852418 61852645 61852418 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61853560 61853679 61853560 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61853761 61853886 61853761 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61853981 61854043 61853981 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61854176 61854283 61854176 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61854787 61854864 61854787 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61855431 61855523 61855431 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61855648 61855734 61855648 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61856271 61856372 61856271 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61856453 61856572 61856453 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61856660 61856829 61856660 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61857366 61857461 61857366 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61857560 61857713 61857560 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61858394 61858542 61858394 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61858915 61858996 61858915 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61859082 61859140 61859082 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61859247 61859292 61859247 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61859387 61859478 61859387 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61859568 61859637 61859568 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61859769 61859813 61859769 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 CDS 61859938 61860006 61859938 ID=Msa0653700-mRNA-1:cds;Parent=Msa0653700-mRNA-1
chr4_3 three_prime_UTR 61860007 61860384 61860007 ID=Msa0653700-mRNA-1:three_prime_utr;Parent=Msa0653700-mRNA-1
Gene Sequence

>Msa0653700

ATGGCCGCAGAAACGTTAGTGCATCAAAACGGTGTCGTTTCCAACGGAGATCTTGGCTCCAAAACCGCCACCGTAAAAAAATCTCGGGAAAGCGACCGTCGTCGCCGTCGCCGGAAACAAAAGAAAATCAACAAAGCCTCTAAGGAACCAAACGCAAACGCCTCCGAAGACGATACTGAAGCAAAAGAGAATACTGAACAACAACAACATCAACAACAACAACAACAGGTTGTTGAACAAGTTGAAATTGAGTATGTACCGGAAAAAGCAGAGCTATATGAAGGCTTGGATGAGGAATTTAAGAAAATCTTTGAGAAATTTAGTTTCAGCGAGGTTATTGATTCAGAGGATAATGATAAGAAGGATGAGTCGGCAGAAAATGCTATTACAAAGAAAAAGGCAGACTCTGATTCTGAAGAGGAAGAAGATGATAACGAGCAAAAAGAGAAAGGAGTCTCAAACAAGAAGAAAAAGCTTCAACGCAGGATGAAGATCGCTGAGCTGAAACAGATTAGCGCAAGGCCTGATGTTGTCGAGGTGTGGGATGCTACTTCAGCAGATCCAAAGTTGTTGGTATTCTTGAAGTCTTACCGAAATACTGTACCTGTACCCAGGCACTGGTGTCAAAAGAGAAAATTTCTGCAGGGGAAAAGAGGTATAGAGAAACAACCTTTTCAGCTTCCTGATTTTATTGCTGCCACAGGAATTGAGAAAATCAGACAGGCTTATATTGAGAAAGAGGACAGCAAAAAGTTGAAACAAAAGCAACGGGAACGCATGCAACCAAAAATGGGGAAGATGGATATTGATTATCAGGTTCTTCATGATGCATTCTTTAAATACCAGACAAAGCCAAAGCTGTCATCTCTTGGGGACTTGTATCATGAAGGAAAAGAATTTGAGGTAAAGTTGAGGGAGATGAAACCTGGCATGTTATCACATGAGTTGAAAGAAGCTCTTGGTATGCCTGAGGGTTCTCCTCCTCCGTGGCTTATTAACATGCAGAGATACGGTCCTCCACCATCATACCCTTCTCTGAAGATCCCCGGCCTGAATGCTCCCATTCCCCCAGGAGCTAGTTTTGGTTATCATCCTGGTGGCTGGGGCAAGCCTCCTGTTGATGAGGGGCTTTCAACACCCCCTCATCCCCCTTTTCACTTCATTGACTTCTTTACTTGTCTGCATCTTGAGCAGTTCGGGCGTCCACTTTATGGAGATGTTTTTGGTGTCCATCAGCAAGATCAGCCTAATTATGAGGTTGGTTTACATAAAAGTTCAACTTTGCAATTAGAGGGGACATTGTACACGGCTGGTTCTATTCAAACATCAGTGGTACTGGGATCAAATAAGATTTTTTTTGCCTCACTTGATTCATTCTCCAGTGAAAAGAGCTTTGACAACTATCGTAGTGAATCTCACCCTGCTACTGTCGACTGTCGGAGTTACTTAGTTTCTGTGATGAGGGTAAAGATCAGGACAGATCTTCAGTGGCACTGCAATGTGTTGCTTGGAGTTACGGTCCCTACAGGAGAGACCATAACACCTGAAGAGCCGGTAGATAAAACAAAACATTGGGGTGACTTGGAAGAGGAGGAAGAGGAGGAGGAAGAAGAGGAAGAAGAGGAGGAAGAGGAAGAAGACATCGAGGAGGAGGCACTTGAAGATGGTATTCAATCTGTTGATAGTATGTCAAGCACACCGACTGGGGTGGAGACACCTGATGTTATTGACCTTCGTAAGGAGCAGAGGAAGGAACCTGAAAGGCCTCTTTATCAAGTCCTTGAAGAAAAAGAGGAAAAACTTGCTCCTGGAACTTTGCTTGGAACTACACACACTTATGTGGTTGGCACGGGCACCCAAGACAAGTCAGGGGCAAAAAGGGTTGATTTGCTTAAAGGTCAAAAGACAGATAGAGTGGATGTCACTTTACTGCCAGAGGAGTTGGATGTCATGGAGAACGTTTTACATACCAGGTATAACGAAGCAAGGGAGGAAGAGAAATTACGGAGTCAGCGTGAGGATTTCAGTGACATGGTTGCTGAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGGAATGAGAAGAAGAGGAAGAGGAAGCAAGAAAAAGATGGCAAGTCCAAGAAAAAAGACTTCAAGTTTTAA

Protein sequence

>Msa0653700

MAAETLVHQNGVVSNGDLGSKTATVKKSRESDRRRRRRKQKKINKASKEPNANASEDDTEAKENTEQQQHQQQQQQVVEQVEIEYVPEKAELYEGLDEEFKKIFEKFSFSEVIDSEDNDKKDESAENAITKKKADSDSEEEEDDNEQKEKGVSNKKKKLQRRMKIAELKQISARPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSSLGDLYHEGKEFEVKLREMKPGMLSHELKEALGMPEGSPPPWLINMQRYGPPPSYPSLKIPGLNAPIPPGASFGYHPGGWGKPPVDEGLSTPPHPPFHFIDFFTCLHLEQFGRPLYGDVFGVHQQDQPNYEVGLHKSSTLQLEGTLYTAGSIQTSVVLGSNKIFFASLDSFSSEKSFDNYRSESHPATVDCRSYLVSVMRVKIRTDLQWHCNVLLGVTVPTGETITPEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEDIEEEALEDGIQSVDSMSSTPTGVETPDVIDLRKEQRKEPERPLYQVLEEKEEKLAPGTLLGTTHTYVVGTGTQDKSGAKRVDLLKGQKTDRVDVTLLPEELDVMENVLHTRYNEAREEEKLRSQREDFSDMVAEVTGSSPGNSLLCKNRNEKKRKRKQEKDGKSKKKDFKF*