Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653740 | RHN59580.1 | 89.431 | 123 | 13 | 0 | 1 | 123 | 1 | 123 | 4.26e-74 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653740 | sp|Q9SK99|PTR11_ARATH | 68.317 | 101 | 32 | 0 | 11 | 111 | 9 | 109 | 7.98e-40 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0455740 | Msa0653740 | 0.803962 | 2.713868e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653740 | MtrunA17_Chr4g0014851 | 89.431 | 123 | 13 | 0 | 1 | 123 | 1 | 123 | 3.92e-78 | 228 |
| Msa0653740 | MtrunA17_Chr4g0014871 | 81.061 | 132 | 19 | 1 | 1 | 126 | 1 | 132 | 1.09e-66 | 211 |
| Msa0653740 | MtrunA17_Chr4g0014801 | 88.288 | 111 | 12 | 1 | 1 | 111 | 1 | 110 | 2.24e-61 | 197 |
| Msa0653740 | MtrunA17_Chr4g0014841 | 86.486 | 111 | 14 | 1 | 1 | 111 | 1 | 110 | 1.89e-60 | 195 |
| Msa0653740 | MtrunA17_Chr4g0014791 | 81.081 | 111 | 20 | 1 | 1 | 111 | 1 | 110 | 7.08e-57 | 186 |
| Msa0653740 | MtrunA17_Chr4g0014781 | 80.180 | 111 | 21 | 1 | 1 | 111 | 1 | 110 | 4.76e-55 | 181 |
| Msa0653740 | MtrunA17_Chr3g0077151 | 73.267 | 101 | 27 | 0 | 15 | 115 | 13 | 113 | 3.47e-45 | 154 |
| Msa0653740 | MtrunA17_Chr3g0112661 | 47.525 | 101 | 53 | 0 | 18 | 118 | 19 | 119 | 5.21e-32 | 110 |
| Msa0653740 | MtrunA17_Chr3g0114501 | 42.742 | 124 | 71 | 0 | 9 | 132 | 1 | 124 | 6.06e-32 | 119 |
| Msa0653740 | MtrunA17_Chr1g0166721 | 50.000 | 100 | 50 | 0 | 18 | 117 | 13 | 112 | 8.14e-32 | 110 |
| Msa0653740 | MtrunA17_Chr8g0375351 | 50.000 | 104 | 52 | 0 | 18 | 121 | 28 | 131 | 6.77e-31 | 115 |
| Msa0653740 | MtrunA17_Chr8g0375321 | 42.400 | 125 | 68 | 1 | 1 | 121 | 4 | 128 | 7.70e-31 | 115 |
| Msa0653740 | MtrunA17_Chr8g0375341 | 50.000 | 104 | 52 | 0 | 18 | 121 | 28 | 131 | 9.48e-31 | 115 |
| Msa0653740 | MtrunA17_Chr7g0241741 | 46.087 | 115 | 62 | 0 | 18 | 132 | 10 | 124 | 1.06e-30 | 115 |
| Msa0653740 | MtrunA17_Chr7g0261731 | 47.222 | 108 | 57 | 0 | 14 | 121 | 15 | 122 | 2.21e-30 | 112 |
| Msa0653740 | MtrunA17_Chr7g0261811 | 51.515 | 99 | 48 | 0 | 18 | 116 | 15 | 113 | 3.37e-30 | 114 |
| Msa0653740 | MtrunA17_Chr7g0261771 | 50.505 | 99 | 49 | 0 | 18 | 116 | 19 | 117 | 5.13e-30 | 113 |
| Msa0653740 | MtrunA17_Chr8g0375331 | 42.975 | 121 | 63 | 1 | 1 | 121 | 1 | 115 | 2.83e-29 | 111 |
| Msa0653740 | MtrunA17_Chr7g0261751 | 49.495 | 99 | 50 | 0 | 18 | 116 | 19 | 117 | 6.64e-29 | 110 |
| Msa0653740 | MtrunA17_Chr1g0166791 | 47.222 | 108 | 57 | 0 | 9 | 116 | 3 | 110 | 6.81e-29 | 110 |
| Msa0653740 | MtrunA17_Chr8g0375291 | 48.485 | 99 | 51 | 0 | 18 | 116 | 28 | 126 | 9.23e-29 | 110 |
| Msa0653740 | MtrunA17_Chr3g0112671 | 46.465 | 99 | 53 | 0 | 18 | 116 | 21 | 119 | 9.60e-29 | 109 |
| Msa0653740 | MtrunA17_Chr7g0261791 | 45.192 | 104 | 57 | 0 | 18 | 121 | 17 | 120 | 1.01e-28 | 109 |
| Msa0653740 | MtrunA17_Chr3g0112611 | 46.939 | 98 | 52 | 0 | 18 | 115 | 20 | 117 | 1.14e-28 | 109 |
| Msa0653740 | MtrunA17_Chr3g0104011 | 44.348 | 115 | 64 | 0 | 18 | 132 | 10 | 124 | 1.87e-28 | 108 |
| Msa0653740 | MtrunA17_Chr7g0261851 | 43.220 | 118 | 65 | 1 | 6 | 121 | 2 | 119 | 2.86e-28 | 108 |
| Msa0653740 | MtrunA17_Chr7g0261671 | 42.991 | 107 | 61 | 0 | 11 | 117 | 13 | 119 | 7.52e-28 | 99.8 |
| Msa0653740 | MtrunA17_Chr7g0240381 | 41.379 | 116 | 67 | 1 | 1 | 116 | 1 | 115 | 1.64e-27 | 106 |
| Msa0653740 | MtrunA17_Chr4g0008651 | 42.342 | 111 | 60 | 1 | 10 | 116 | 10 | 120 | 2.44e-27 | 105 |
| Msa0653740 | MtrunA17_Chr8g0353031 | 53.333 | 105 | 41 | 1 | 31 | 127 | 19 | 123 | 1.13e-26 | 103 |
| Msa0653740 | MtrunA17_Chr1g0166711 | 48.077 | 104 | 54 | 0 | 18 | 121 | 13 | 116 | 1.28e-26 | 103 |
| Msa0653740 | MtrunA17_Chr7g0261881 | 45.192 | 104 | 57 | 0 | 18 | 121 | 15 | 118 | 1.51e-26 | 103 |
| Msa0653740 | MtrunA17_Chr4g0005901 | 42.609 | 115 | 66 | 0 | 18 | 132 | 20 | 134 | 1.60e-26 | 103 |
| Msa0653740 | MtrunA17_Chr8g0375311 | 40.496 | 121 | 66 | 1 | 2 | 116 | 6 | 126 | 2.14e-26 | 103 |
| Msa0653740 | MtrunA17_Chr1g0187241 | 43.333 | 120 | 57 | 1 | 2 | 121 | 9 | 117 | 1.22e-25 | 101 |
| Msa0653740 | MtrunA17_Chr8g0375361 | 40.945 | 127 | 69 | 2 | 1 | 121 | 4 | 130 | 4.08e-24 | 96.7 |
| Msa0653740 | MtrunA17_Chr1g0166741 | 43.878 | 98 | 55 | 0 | 18 | 115 | 15 | 112 | 1.59e-23 | 95.1 |
| Msa0653740 | MtrunA17_Chr3g0082621 | 53.425 | 73 | 34 | 0 | 45 | 117 | 1 | 73 | 7.17e-23 | 86.3 |
| Msa0653740 | MtrunA17_Chr5g0400371 | 38.393 | 112 | 68 | 1 | 6 | 116 | 87 | 198 | 1.70e-21 | 89.4 |
| Msa0653740 | MtrunA17_Chr4g0056431 | 39.655 | 116 | 70 | 0 | 17 | 132 | 12 | 127 | 1.31e-20 | 86.7 |
| Msa0653740 | MtrunA17_Chr5g0399071 | 41.379 | 116 | 68 | 0 | 17 | 132 | 12 | 127 | 2.52e-20 | 85.9 |
| Msa0653740 | MtrunA17_Chr4g0063591 | 44.355 | 124 | 69 | 0 | 9 | 132 | 1 | 124 | 9.72e-20 | 84.3 |
| Msa0653740 | MtrunA17_Chr4g0011041 | 37.374 | 99 | 62 | 0 | 18 | 116 | 24 | 122 | 1.41e-18 | 80.9 |
| Msa0653740 | MtrunA17_Chr4g0054891 | 35.606 | 132 | 81 | 3 | 1 | 128 | 80 | 211 | 1.70e-18 | 80.9 |
| Msa0653740 | MtrunA17_Chr3g0142101 | 43.299 | 97 | 55 | 0 | 18 | 114 | 23 | 119 | 4.13e-18 | 79.7 |
| Msa0653740 | MtrunA17_Chr3g0142091 | 40.566 | 106 | 62 | 1 | 10 | 114 | 5 | 110 | 5.78e-18 | 79.3 |
| Msa0653740 | MtrunA17_Chr7g0240221 | 28.070 | 114 | 82 | 0 | 6 | 119 | 3 | 116 | 6.17e-18 | 74.3 |
| Msa0653740 | MtrunA17_Chr7g0240191 | 28.070 | 114 | 82 | 0 | 6 | 119 | 3 | 116 | 6.17e-18 | 74.3 |
| Msa0653740 | MtrunA17_Chr7g0240161 | 28.070 | 114 | 82 | 0 | 6 | 119 | 3 | 116 | 6.17e-18 | 74.3 |
| Msa0653740 | MtrunA17_Chr7g0217461 | 36.000 | 100 | 64 | 0 | 17 | 116 | 11 | 110 | 8.38e-18 | 79.0 |
| Msa0653740 | MtrunA17_Chr3g0142111 | 43.299 | 97 | 55 | 0 | 18 | 114 | 34 | 130 | 9.98e-18 | 77.8 |
| Msa0653740 | MtrunA17_Chr5g0399061 | 42.268 | 97 | 56 | 0 | 11 | 107 | 8 | 104 | 1.03e-17 | 78.6 |
| Msa0653740 | MtrunA17_Chr7g0240141 | 27.193 | 114 | 83 | 0 | 6 | 119 | 3 | 116 | 1.97e-17 | 73.2 |
| Msa0653740 | MtrunA17_Chr1g0166771 | 52.239 | 67 | 32 | 0 | 49 | 115 | 10 | 76 | 7.07e-17 | 76.3 |
| Msa0653740 | MtrunA17_Chr7g0255611 | 42.708 | 96 | 53 | 1 | 21 | 116 | 22 | 115 | 1.38e-16 | 75.5 |
| Msa0653740 | MtrunA17_Chr7g0255621 | 41.000 | 100 | 59 | 0 | 17 | 116 | 7 | 106 | 1.64e-16 | 75.1 |
| Msa0653740 | MtrunA17_Chr5g0422881 | 45.882 | 85 | 46 | 0 | 30 | 114 | 20 | 104 | 3.06e-16 | 74.3 |
| Msa0653740 | MtrunA17_Chr7g0235511 | 26.724 | 116 | 83 | 1 | 6 | 119 | 3 | 118 | 1.97e-15 | 67.8 |
| Msa0653740 | MtrunA17_Chr7g0218851 | 35.714 | 98 | 62 | 1 | 12 | 109 | 29 | 125 | 2.43e-15 | 71.6 |
| Msa0653740 | MtrunA17_Chr5g0415791 | 39.080 | 87 | 53 | 0 | 30 | 116 | 29 | 115 | 3.41e-15 | 71.2 |
| Msa0653740 | MtrunA17_Chr7g0255601 | 37.931 | 116 | 65 | 2 | 15 | 123 | 12 | 127 | 4.14e-15 | 71.2 |
| Msa0653740 | MtrunA17_Chr7g0214461 | 35.714 | 112 | 66 | 2 | 5 | 116 | 59 | 164 | 4.16e-15 | 71.2 |
| Msa0653740 | MtrunA17_Chr7g0240271 | 27.103 | 107 | 78 | 0 | 10 | 116 | 4 | 110 | 7.72e-15 | 70.5 |
| Msa0653740 | MtrunA17_Chr8g0362781 | 30.000 | 120 | 82 | 1 | 13 | 132 | 15 | 132 | 1.15e-14 | 69.7 |
| Msa0653740 | MtrunA17_Chr7g0214731 | 40.000 | 85 | 51 | 0 | 31 | 115 | 62 | 146 | 1.88e-14 | 69.3 |
| Msa0653740 | MtrunA17_Chr5g0439381 | 40.000 | 115 | 69 | 0 | 18 | 132 | 16 | 130 | 6.65e-14 | 67.8 |
| Msa0653740 | MtrunA17_Chr1g0157611 | 38.298 | 94 | 56 | 1 | 17 | 108 | 1 | 94 | 7.35e-14 | 67.4 |
| Msa0653740 | MtrunA17_Chr4g0060051 | 35.417 | 96 | 62 | 0 | 18 | 113 | 10 | 105 | 2.94e-13 | 62.4 |
| Msa0653740 | MtrunA17_Chr1g0157601 | 38.298 | 94 | 56 | 1 | 25 | 116 | 8 | 101 | 3.65e-13 | 65.5 |
| Msa0653740 | MtrunA17_Chr8g0362791 | 36.585 | 82 | 52 | 0 | 36 | 117 | 42 | 123 | 6.31e-13 | 62.0 |
| Msa0653740 | MtrunA17_Chr2g0276751 | 32.203 | 118 | 76 | 1 | 10 | 123 | 18 | 135 | 8.76e-13 | 64.3 |
| Msa0653740 | MtrunA17_Chr4g0059991 | 43.056 | 72 | 41 | 0 | 36 | 107 | 28 | 99 | 1.37e-12 | 63.9 |
| Msa0653740 | MtrunA17_Chr2g0325951 | 40.351 | 114 | 62 | 2 | 17 | 125 | 1 | 113 | 2.45e-12 | 63.2 |
| Msa0653740 | MtrunA17_Chr3g0133341 | 34.579 | 107 | 70 | 0 | 26 | 132 | 10 | 116 | 2.59e-12 | 63.2 |
| Msa0653740 | MtrunA17_Chr6g0451841 | 38.750 | 80 | 49 | 0 | 37 | 116 | 12 | 91 | 4.11e-12 | 62.4 |
| Msa0653740 | MtrunA17_Chr1g0213711 | 35.955 | 89 | 57 | 0 | 28 | 116 | 19 | 107 | 6.32e-12 | 62.0 |
| Msa0653740 | MtrunA17_Chr8g0379971 | 28.099 | 121 | 87 | 0 | 12 | 132 | 2 | 122 | 1.01e-11 | 61.2 |
| Msa0653740 | MtrunA17_Chr5g0415851 | 39.706 | 68 | 41 | 0 | 44 | 111 | 6 | 73 | 1.99e-11 | 57.0 |
| Msa0653740 | MtrunA17_Chr7g0240281 | 29.412 | 85 | 60 | 0 | 28 | 112 | 22 | 106 | 2.17e-11 | 60.5 |
| Msa0653740 | MtrunA17_Chr4g0059971 | 32.990 | 97 | 65 | 0 | 36 | 132 | 40 | 136 | 2.96e-11 | 60.1 |
| Msa0653740 | MtrunA17_Chr4g0060001 | 34.043 | 94 | 57 | 1 | 32 | 125 | 31 | 119 | 4.72e-11 | 59.3 |
| Msa0653740 | MtrunA17_Chr2g0325961 | 37.255 | 102 | 59 | 1 | 17 | 113 | 1 | 102 | 5.63e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653740 | AT1G22570.1 | 68.317 | 101 | 32 | 0 | 11 | 111 | 9 | 109 | 8.11e-41 | 143 |
| Msa0653740 | AT1G22550.1 | 67.327 | 101 | 33 | 0 | 11 | 111 | 9 | 109 | 1.42e-40 | 142 |
| Msa0653740 | AT1G22540.1 | 72.917 | 96 | 26 | 0 | 21 | 116 | 19 | 114 | 6.68e-37 | 132 |
| Msa0653740 | AT1G72120.1 | 57.576 | 132 | 50 | 2 | 1 | 132 | 1 | 126 | 8.48e-35 | 127 |
| Msa0653740 | AT1G72125.1 | 61.345 | 119 | 43 | 1 | 14 | 132 | 11 | 126 | 1.05e-33 | 124 |
| Msa0653740 | AT3G53960.1 | 47.500 | 120 | 57 | 2 | 3 | 116 | 2 | 121 | 4.07e-31 | 117 |
| Msa0653740 | AT1G72140.1 | 51.818 | 110 | 53 | 0 | 14 | 123 | 16 | 125 | 5.81e-30 | 113 |
| Msa0653740 | AT2G37900.1 | 42.754 | 138 | 73 | 2 | 1 | 132 | 1 | 138 | 7.88e-30 | 113 |
| Msa0653740 | AT3G54140.1 | 49.515 | 103 | 50 | 1 | 18 | 120 | 10 | 110 | 8.39e-29 | 110 |
| Msa0653740 | AT3G54140.2 | 49.515 | 103 | 50 | 1 | 18 | 120 | 10 | 110 | 8.39e-29 | 110 |
| Msa0653740 | AT1G22570.2 | 72.857 | 70 | 19 | 0 | 42 | 111 | 3 | 72 | 1.04e-28 | 110 |
| Msa0653740 | AT2G02040.1 | 48.077 | 104 | 54 | 0 | 18 | 121 | 27 | 130 | 6.45e-28 | 107 |
| Msa0653740 | AT3G54450.1 | 56.322 | 87 | 37 | 1 | 30 | 116 | 11 | 96 | 3.34e-27 | 105 |
| Msa0653740 | AT5G01180.2 | 41.739 | 115 | 67 | 0 | 18 | 132 | 11 | 125 | 1.77e-26 | 103 |
| Msa0653740 | AT5G01180.3 | 41.739 | 115 | 67 | 0 | 18 | 132 | 11 | 125 | 1.77e-26 | 103 |
| Msa0653740 | AT5G01180.1 | 41.739 | 115 | 67 | 0 | 18 | 132 | 11 | 125 | 1.77e-26 | 103 |
| Msa0653740 | AT2G40460.1 | 46.465 | 99 | 53 | 0 | 18 | 116 | 10 | 108 | 2.11e-26 | 103 |
| Msa0653740 | AT1G72130.1 | 59.375 | 96 | 39 | 0 | 30 | 125 | 23 | 118 | 1.33e-25 | 101 |
| Msa0653740 | AT1G12110.1 | 44.800 | 125 | 69 | 0 | 8 | 132 | 3 | 127 | 9.23e-25 | 99.0 |
| Msa0653740 | AT5G46040.1 | 39.837 | 123 | 74 | 0 | 10 | 132 | 5 | 127 | 1.33e-24 | 98.6 |
| Msa0653740 | AT1G62200.3 | 44.231 | 104 | 58 | 0 | 18 | 121 | 52 | 155 | 2.14e-24 | 98.2 |
| Msa0653740 | AT1G62200.2 | 44.231 | 104 | 58 | 0 | 18 | 121 | 38 | 141 | 2.23e-24 | 97.8 |
| Msa0653740 | AT1G62200.1 | 44.231 | 104 | 58 | 0 | 18 | 121 | 38 | 141 | 2.47e-24 | 97.8 |
| Msa0653740 | AT2G02020.2 | 38.938 | 113 | 68 | 1 | 3 | 114 | 12 | 124 | 2.37e-23 | 95.1 |
| Msa0653740 | AT2G02020.1 | 38.938 | 113 | 68 | 1 | 3 | 114 | 12 | 124 | 2.72e-23 | 94.7 |
| Msa0653740 | AT5G46050.1 | 42.857 | 105 | 60 | 0 | 10 | 114 | 5 | 109 | 4.28e-23 | 94.4 |
| Msa0653740 | AT1G32450.1 | 36.441 | 118 | 73 | 1 | 1 | 116 | 4 | 121 | 6.84e-20 | 85.1 |
| Msa0653740 | AT4G21680.1 | 41.304 | 92 | 54 | 0 | 18 | 109 | 14 | 105 | 8.33e-18 | 79.3 |
| Msa0653740 | AT2G26690.1 | 41.935 | 124 | 72 | 0 | 9 | 132 | 1 | 124 | 1.78e-16 | 75.5 |
| Msa0653740 | AT1G69870.1 | 39.773 | 88 | 53 | 0 | 29 | 116 | 48 | 135 | 5.48e-16 | 73.9 |
| Msa0653740 | AT1G68570.1 | 46.914 | 81 | 43 | 0 | 41 | 121 | 32 | 112 | 3.22e-15 | 71.6 |
| Msa0653740 | AT1G68570.2 | 47.368 | 76 | 40 | 0 | 46 | 121 | 7 | 82 | 1.67e-14 | 69.7 |
| Msa0653740 | AT3G01350.1 | 37.647 | 85 | 53 | 0 | 30 | 114 | 5 | 89 | 2.46e-13 | 66.2 |
| Msa0653740 | AT5G13400.1 | 37.209 | 86 | 54 | 0 | 31 | 116 | 63 | 148 | 2.65e-13 | 66.2 |
| Msa0653740 | AT1G69860.1 | 30.928 | 97 | 67 | 0 | 36 | 132 | 22 | 118 | 2.84e-13 | 66.2 |
| Msa0653740 | AT5G19640.1 | 33.684 | 95 | 63 | 0 | 33 | 127 | 60 | 154 | 3.17e-13 | 66.2 |
| Msa0653740 | AT5G62730.1 | 34.234 | 111 | 73 | 0 | 6 | 116 | 30 | 140 | 5.07e-13 | 65.5 |
| Msa0653740 | AT5G14940.1 | 37.647 | 85 | 53 | 0 | 30 | 114 | 5 | 89 | 6.65e-12 | 62.4 |
| Msa0653740 | AT1G27080.1 | 35.714 | 98 | 62 | 1 | 19 | 116 | 2 | 98 | 1.01e-11 | 61.6 |
| Msa0653740 | AT1G18880.1 | 37.778 | 90 | 55 | 1 | 36 | 125 | 23 | 111 | 1.51e-11 | 61.2 |
| Msa0653740 | AT2G37900.2 | 48.276 | 58 | 30 | 0 | 75 | 132 | 2 | 59 | 1.79e-11 | 60.8 |
| Msa0653740 | AT3G21670.1 | 38.136 | 118 | 73 | 0 | 15 | 132 | 12 | 129 | 5.83e-11 | 59.7 |
Find 35 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGATCTGTCCTTCTTATT+TGG | 0.127040 | 4_3:+61920045 | None:intergenic |
| GCAGAGAGGATGTCATATTT+TGG | 0.206086 | 4_3:-61919236 | Msa0653740:CDS |
| TCAGATCCAAATCTGGTTAT+TGG | 0.263593 | 4_3:-61919845 | Msa0653740:CDS |
| GTCACAACTCAACTTGCTTC+TGG | 0.286622 | 4_3:+61920026 | None:intergenic |
| CGTTCTGCTTGGTTTATCAT+AGG | 0.320100 | 4_3:-61919822 | Msa0653740:intron |
| TGCTTCTCTCATCTATATCT+TGG | 0.338300 | 4_3:-61919051 | Msa0653740:CDS |
| AGCAAATGCACCGTATATAG+AGG | 0.339872 | 4_3:-61920124 | Msa0653740:five_prime_UTR |
| AAGAATAGAATTTGGTTCAA+TGG | 0.354362 | 4_3:-61919949 | Msa0653740:exon |
| ATGTGTCTGTTGTGTTTGTA+TGG | 0.379186 | 4_3:+61920089 | None:intergenic |
| GCTTCCCTACTTCCTCTGTT+AGG | 0.394166 | 4_3:-61919122 | Msa0653740:CDS |
| ATCTGTCCTTCTTATTTGGA+TGG | 0.395000 | 4_3:+61920049 | None:intergenic |
| AGAACGCCAATAACCAGATT+TGG | 0.403234 | 4_3:+61919839 | None:intergenic |
| CTGCTAAGAATGTCAATGTT+TGG | 0.449566 | 4_3:-61919154 | Msa0653740:CDS |
| CTGGTTATTGGCGTTCTGCT+TGG | 0.452366 | 4_3:-61919833 | Msa0653740:CDS |
| CAATTAGATGATCTTGTAGA+TGG | 0.461691 | 4_3:-61919897 | Msa0653740:CDS |
| ACAAAACTTTGTTATTCCTA+AGG | 0.479528 | 4_3:+61918904 | None:intergenic |
| AAGAATGTCAATGTTTGGTC+TGG | 0.481539 | 4_3:-61919149 | Msa0653740:CDS |
| AGTTGAGTTGTGACATTTGT+GGG | 0.484821 | 4_3:-61920017 | Msa0653740:five_prime_UTR |
| CCTGCCATCAGATCCAAATC+TGG | 0.493186 | 4_3:-61919852 | Msa0653740:CDS |
| AGCACCTAACAGAGGAAGTA+GGG | 0.494279 | 4_3:+61919118 | None:intergenic |
| GCAAAACCATCCAAATAAGA+AGG | 0.519069 | 4_3:-61920055 | Msa0653740:five_prime_UTR |
| GTTGCAGTGCTTTGTTTGAG+TGG | 0.521993 | 4_3:+61919179 | None:intergenic |
| ATAACCAGATTTGGATCTGA+TGG | 0.545545 | 4_3:+61919848 | None:intergenic |
| CCAGATTTGGATCTGATGGC+AGG | 0.546146 | 4_3:+61919852 | None:intergenic |
| AAGCACCTAACAGAGGAAGT+AGG | 0.548357 | 4_3:+61919117 | None:intergenic |
| AATAGAATTTGGTTCAATGG+AGG | 0.550544 | 4_3:-61919946 | Msa0653740:exon |
| AACTTGATATCATATCTGAC+AGG | 0.569633 | 4_3:-61919203 | Msa0653740:CDS |
| GCAAATGCACCGTATATAGA+GGG | 0.587968 | 4_3:-61920123 | Msa0653740:five_prime_UTR |
| TGTTAATTTAGGTGTGGAGG+TGG | 0.603679 | 4_3:-61919258 | Msa0653740:intron |
| AAGTTGAGTTGTGACATTTG+TGG | 0.614686 | 4_3:-61920018 | Msa0653740:five_prime_UTR |
| TAGGTGTGGAGGTGGCAGAG+AGG | 0.632882 | 4_3:-61919250 | Msa0653740:CDS |
| GAATGTTAATTTAGGTGTGG+AGG | 0.640730 | 4_3:-61919261 | Msa0653740:intron |
| AATGCTACAATACTAACATG+TGG | 0.653249 | 4_3:+61918931 | None:intergenic |
| GCAATGAAAGCACCTAACAG+AGG | 0.656054 | 4_3:+61919110 | None:intergenic |
| GAGAAGCAAGTATGATTGTG+TGG | 0.683218 | 4_3:+61919066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTAAAGAATAGAATT+TGG | - | chr4_3:61919024-61919043 | Msa0653740:CDS | 10.0% |
| !! | AAGTTATTTAAAAAATTATG+AGG | + | chr4_3:61920026-61920045 | None:intergenic | 10.0% |
| !!! | TTTTATTAAAGAATAGAATT+TGG | - | chr4_3:61919024-61919043 | Msa0653740:CDS | 10.0% |
| !! | AAGTTATTTAAAAAATTATG+AGG | + | chr4_3:61920026-61920045 | None:intergenic | 10.0% |
| !! | ATCATATATTAAGTTTACTA+TGG | - | chr4_3:61919276-61919295 | Msa0653740:intron | 15.0% |
| !! | AAAAAAATAAGAACAAAGTA+AGG | + | chr4_3:61919302-61919321 | None:intergenic | 15.0% |
| !!! | ACTTTGTTCTTATTTTTTTT+TGG | - | chr4_3:61919303-61919322 | Msa0653740:intron | 15.0% |
| !!! | CTTTGTTCTTATTTTTTTTT+GGG | - | chr4_3:61919304-61919323 | Msa0653740:intron | 15.0% |
| !! | TGAATTATGAATGTTAATTT+AGG | - | chr4_3:61919712-61919731 | Msa0653740:intron | 15.0% |
| !! | AAATTGAAGGAAAAAAAAAA+CGG | + | chr4_3:61920000-61920019 | None:intergenic | 15.0% |
| !! | ATCATATATTAAGTTTACTA+TGG | - | chr4_3:61919276-61919295 | Msa0653740:intron | 15.0% |
| !! | AAAAAAATAAGAACAAAGTA+AGG | + | chr4_3:61919302-61919321 | None:intergenic | 15.0% |
| !!! | ACTTTGTTCTTATTTTTTTT+TGG | - | chr4_3:61919303-61919322 | Msa0653740:intron | 15.0% |
| !!! | CTTTGTTCTTATTTTTTTTT+GGG | - | chr4_3:61919304-61919323 | Msa0653740:intron | 15.0% |
| !! | TGAATTATGAATGTTAATTT+AGG | - | chr4_3:61919712-61919731 | Msa0653740:intron | 15.0% |
| !! | AAATTGAAGGAAAAAAAAAA+CGG | + | chr4_3:61920000-61920019 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCCCTCTATATA+CGG | + | chr4_3:61918870-61918889 | None:intergenic | 20.0% |
| !! | GTAAACTTAATATATGATCA+TGG | + | chr4_3:61919274-61919293 | None:intergenic | 20.0% |
| !!! | GAATTTTTTGAATGATTCTT+AGG | + | chr4_3:61919373-61919392 | None:intergenic | 20.0% |
| !!! | TCAAAAAATTCATAGTTTGT+CGG | - | chr4_3:61919382-61919401 | Msa0653740:intron | 20.0% |
| !!! | AAAATGTGTAATTTTTGAGT+TGG | + | chr4_3:61919643-61919662 | None:intergenic | 20.0% |
| !! | AATTATGAGGTAAAAATTGA+AGG | + | chr4_3:61920013-61920032 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCCCTCTATATA+CGG | + | chr4_3:61918870-61918889 | None:intergenic | 20.0% |
| !! | GTAAACTTAATATATGATCA+TGG | + | chr4_3:61919274-61919293 | None:intergenic | 20.0% |
| !!! | GAATTTTTTGAATGATTCTT+AGG | + | chr4_3:61919373-61919392 | None:intergenic | 20.0% |
| !!! | TCAAAAAATTCATAGTTTGT+CGG | - | chr4_3:61919382-61919401 | Msa0653740:intron | 20.0% |
| !!! | AAAATGTGTAATTTTTGAGT+TGG | + | chr4_3:61919643-61919662 | None:intergenic | 20.0% |
| !! | AATTATGAGGTAAAAATTGA+AGG | + | chr4_3:61920013-61920032 | None:intergenic | 20.0% |
| !! | AAGAATAGAATTTGGTTCAA+TGG | - | chr4_3:61919032-61919051 | Msa0653740:CDS | 25.0% |
| !! | CAAAAAATTCATAGTTTGTC+GGG | - | chr4_3:61919383-61919402 | Msa0653740:intron | 25.0% |
| !! | ATTCATGATTTGTAAGTTGT+AGG | + | chr4_3:61919425-61919444 | None:intergenic | 25.0% |
| ! | ATTAGAGTATGTTCGTTAAA+TGG | + | chr4_3:61919542-61919561 | None:intergenic | 25.0% |
| ! | TAACGAACATACTCTAATAA+CGG | - | chr4_3:61919544-61919563 | Msa0653740:intron | 25.0% |
| ! | TATGAATGTTAATTTAGGTG+TGG | - | chr4_3:61919717-61919736 | Msa0653740:intron | 25.0% |
| !!! | ATGTCATATTTTGGGATTAA+GGG | - | chr4_3:61919754-61919773 | Msa0653740:intron | 25.0% |
| !!! | ACAAAACTTTGTTATTCCTA+AGG | + | chr4_3:61920080-61920099 | None:intergenic | 25.0% |
| !! | AAGAATAGAATTTGGTTCAA+TGG | - | chr4_3:61919032-61919051 | Msa0653740:CDS | 25.0% |
| !! | CAAAAAATTCATAGTTTGTC+GGG | - | chr4_3:61919383-61919402 | Msa0653740:intron | 25.0% |
| !! | ATTCATGATTTGTAAGTTGT+AGG | + | chr4_3:61919425-61919444 | None:intergenic | 25.0% |
| ! | ATTAGAGTATGTTCGTTAAA+TGG | + | chr4_3:61919542-61919561 | None:intergenic | 25.0% |
| ! | TAACGAACATACTCTAATAA+CGG | - | chr4_3:61919544-61919563 | Msa0653740:intron | 25.0% |
| ! | TATGAATGTTAATTTAGGTG+TGG | - | chr4_3:61919717-61919736 | Msa0653740:intron | 25.0% |
| !!! | ATGTCATATTTTGGGATTAA+GGG | - | chr4_3:61919754-61919773 | Msa0653740:intron | 25.0% |
| !!! | ACAAAACTTTGTTATTCCTA+AGG | + | chr4_3:61920080-61920099 | None:intergenic | 25.0% |
| ! | AATAGAATTTGGTTCAATGG+AGG | - | chr4_3:61919035-61919054 | Msa0653740:CDS | 30.0% |
| CAATTAGATGATCTTGTAGA+TGG | - | chr4_3:61919084-61919103 | Msa0653740:CDS | 30.0% | |
| ! | TTTTCCTTTAAGCCAAAGAT+TGG | - | chr4_3:61919222-61919241 | Msa0653740:CDS | 30.0% |
| TTTCCTTTAAGCCAAAGATT+GGG | - | chr4_3:61919223-61919242 | Msa0653740:CDS | 30.0% | |
| AGAAAATCAATTTCAGTTGG+TGG | + | chr4_3:61919331-61919350 | None:intergenic | 30.0% | |
| GGAAGAAAATCAATTTCAGT+TGG | + | chr4_3:61919334-61919353 | None:intergenic | 30.0% | |
| !!! | GATGTCATATTTTGGGATTA+AGG | - | chr4_3:61919753-61919772 | Msa0653740:intron | 30.0% |
| AACTTGATATCATATCTGAC+AGG | - | chr4_3:61919778-61919797 | Msa0653740:intron | 30.0% | |
| !!! | TTCATTGCTGATTCTTTTCT+TGG | - | chr4_3:61919886-61919905 | Msa0653740:CDS | 30.0% |
| !!! | CACTTTCTTACCTTTTTTAG+AGG | - | chr4_3:61919967-61919986 | Msa0653740:five_prime_UTR | 30.0% |
| AATGCTACAATACTAACATG+TGG | + | chr4_3:61920053-61920072 | None:intergenic | 30.0% | |
| ! | TATTGTAGCATTTTGTCCTT+AGG | - | chr4_3:61920061-61920080 | Msa0653740:five_prime_UTR | 30.0% |
| ! | AATAGAATTTGGTTCAATGG+AGG | - | chr4_3:61919035-61919054 | Msa0653740:CDS | 30.0% |
| CAATTAGATGATCTTGTAGA+TGG | - | chr4_3:61919084-61919103 | Msa0653740:CDS | 30.0% | |
| ! | TTTTCCTTTAAGCCAAAGAT+TGG | - | chr4_3:61919222-61919241 | Msa0653740:CDS | 30.0% |
| TTTCCTTTAAGCCAAAGATT+GGG | - | chr4_3:61919223-61919242 | Msa0653740:CDS | 30.0% | |
| AGAAAATCAATTTCAGTTGG+TGG | + | chr4_3:61919331-61919350 | None:intergenic | 30.0% | |
| GGAAGAAAATCAATTTCAGT+TGG | + | chr4_3:61919334-61919353 | None:intergenic | 30.0% | |
| !!! | GATGTCATATTTTGGGATTA+AGG | - | chr4_3:61919753-61919772 | Msa0653740:intron | 30.0% |
| AACTTGATATCATATCTGAC+AGG | - | chr4_3:61919778-61919797 | Msa0653740:intron | 30.0% | |
| !!! | TTCATTGCTGATTCTTTTCT+TGG | - | chr4_3:61919886-61919905 | Msa0653740:CDS | 30.0% |
| !!! | CACTTTCTTACCTTTTTTAG+AGG | - | chr4_3:61919967-61919986 | Msa0653740:five_prime_UTR | 30.0% |
| AATGCTACAATACTAACATG+TGG | + | chr4_3:61920053-61920072 | None:intergenic | 30.0% | |
| ! | TATTGTAGCATTTTGTCCTT+AGG | - | chr4_3:61920061-61920080 | Msa0653740:five_prime_UTR | 30.0% |
| ATGTGTCTGTTGTGTTTGTA+TGG | + | chr4_3:61918895-61918914 | None:intergenic | 35.0% | |
| !! | CTTATTTGGATGGTTTTGCT+TGG | + | chr4_3:61918925-61918944 | None:intergenic | 35.0% |
| GCAAAACCATCCAAATAAGA+AGG | - | chr4_3:61918926-61918945 | Msa0653740:three_prime_UTR | 35.0% | |
| ! | ATCTGTCCTTCTTATTTGGA+TGG | + | chr4_3:61918935-61918954 | None:intergenic | 35.0% |
| ! | AAGTTGAGTTGTGACATTTG+TGG | - | chr4_3:61918963-61918982 | Msa0653740:exon | 35.0% |
| ! | AGTTGAGTTGTGACATTTGT+GGG | - | chr4_3:61918964-61918983 | Msa0653740:exon | 35.0% |
| ATAACCAGATTTGGATCTGA+TGG | + | chr4_3:61919136-61919155 | None:intergenic | 35.0% | |
| TCAGATCCAAATCTGGTTAT+TGG | - | chr4_3:61919136-61919155 | Msa0653740:CDS | 35.0% | |
| TTAGGCTAACATATTTGACG+AGG | + | chr4_3:61919355-61919374 | None:intergenic | 35.0% | |
| GAATGTTAATTTAGGTGTGG+AGG | - | chr4_3:61919720-61919739 | Msa0653740:intron | 35.0% | |
| ! | CAGAGAGGATGTCATATTTT+GGG | - | chr4_3:61919746-61919765 | Msa0653740:intron | 35.0% |
| CTGCTAAGAATGTCAATGTT+TGG | - | chr4_3:61919827-61919846 | Msa0653740:CDS | 35.0% | |
| AAGAATGTCAATGTTTGGTC+TGG | - | chr4_3:61919832-61919851 | Msa0653740:CDS | 35.0% | |
| TGCTTCTCTCATCTATATCT+TGG | - | chr4_3:61919930-61919949 | Msa0653740:CDS | 35.0% | |
| ! | CGGTAAAAAGCCTCTAAAAA+AGG | + | chr4_3:61919980-61919999 | None:intergenic | 35.0% |
| ATGTGTCTGTTGTGTTTGTA+TGG | + | chr4_3:61918895-61918914 | None:intergenic | 35.0% | |
| !! | CTTATTTGGATGGTTTTGCT+TGG | + | chr4_3:61918925-61918944 | None:intergenic | 35.0% |
| GCAAAACCATCCAAATAAGA+AGG | - | chr4_3:61918926-61918945 | Msa0653740:three_prime_UTR | 35.0% | |
| ! | ATCTGTCCTTCTTATTTGGA+TGG | + | chr4_3:61918935-61918954 | None:intergenic | 35.0% |
| ! | AAGTTGAGTTGTGACATTTG+TGG | - | chr4_3:61918963-61918982 | Msa0653740:exon | 35.0% |
| ! | AGTTGAGTTGTGACATTTGT+GGG | - | chr4_3:61918964-61918983 | Msa0653740:exon | 35.0% |
| ATAACCAGATTTGGATCTGA+TGG | + | chr4_3:61919136-61919155 | None:intergenic | 35.0% | |
| TCAGATCCAAATCTGGTTAT+TGG | - | chr4_3:61919136-61919155 | Msa0653740:CDS | 35.0% | |
| TTAGGCTAACATATTTGACG+AGG | + | chr4_3:61919355-61919374 | None:intergenic | 35.0% | |
| GAATGTTAATTTAGGTGTGG+AGG | - | chr4_3:61919720-61919739 | Msa0653740:intron | 35.0% | |
| ! | CAGAGAGGATGTCATATTTT+GGG | - | chr4_3:61919746-61919765 | Msa0653740:intron | 35.0% |
| CTGCTAAGAATGTCAATGTT+TGG | - | chr4_3:61919827-61919846 | Msa0653740:CDS | 35.0% | |
| AAGAATGTCAATGTTTGGTC+TGG | - | chr4_3:61919832-61919851 | Msa0653740:CDS | 35.0% | |
| TGCTTCTCTCATCTATATCT+TGG | - | chr4_3:61919930-61919949 | Msa0653740:CDS | 35.0% | |
| ! | CGGTAAAAAGCCTCTAAAAA+AGG | + | chr4_3:61919980-61919999 | None:intergenic | 35.0% |
| AGCAAATGCACCGTATATAG+AGG | - | chr4_3:61918857-61918876 | Msa0653740:three_prime_UTR | 40.0% | |
| GCAAATGCACCGTATATAGA+GGG | - | chr4_3:61918858-61918877 | Msa0653740:three_prime_UTR | 40.0% | |
| !! | TTGGATGGTTTTGCTTGGTT+AGG | + | chr4_3:61918920-61918939 | None:intergenic | 40.0% |
| CTGGATCTGTCCTTCTTATT+TGG | + | chr4_3:61918939-61918958 | None:intergenic | 40.0% | |
| AGAACGCCAATAACCAGATT+TGG | + | chr4_3:61919145-61919164 | None:intergenic | 40.0% | |
| CGTTCTGCTTGGTTTATCAT+AGG | - | chr4_3:61919159-61919178 | Msa0653740:CDS | 40.0% | |
| ! | TGAACAAGCTTTAGTTGTGG+TGG | + | chr4_3:61919483-61919502 | None:intergenic | 40.0% |
| !! | AATGGACTACTTCAGAATGC+TGG | + | chr4_3:61919524-61919543 | None:intergenic | 40.0% |
| TGTTAATTTAGGTGTGGAGG+TGG | - | chr4_3:61919723-61919742 | Msa0653740:intron | 40.0% | |
| ! | GCAGAGAGGATGTCATATTT+TGG | - | chr4_3:61919745-61919764 | Msa0653740:intron | 40.0% |
| GAGAAGCAAGTATGATTGTG+TGG | + | chr4_3:61919918-61919937 | None:intergenic | 40.0% | |
| AGCAAATGCACCGTATATAG+AGG | - | chr4_3:61918857-61918876 | Msa0653740:three_prime_UTR | 40.0% | |
| GCAAATGCACCGTATATAGA+GGG | - | chr4_3:61918858-61918877 | Msa0653740:three_prime_UTR | 40.0% | |
| !! | TTGGATGGTTTTGCTTGGTT+AGG | + | chr4_3:61918920-61918939 | None:intergenic | 40.0% |
| CTGGATCTGTCCTTCTTATT+TGG | + | chr4_3:61918939-61918958 | None:intergenic | 40.0% | |
| AGAACGCCAATAACCAGATT+TGG | + | chr4_3:61919145-61919164 | None:intergenic | 40.0% | |
| CGTTCTGCTTGGTTTATCAT+AGG | - | chr4_3:61919159-61919178 | Msa0653740:CDS | 40.0% | |
| ! | TGAACAAGCTTTAGTTGTGG+TGG | + | chr4_3:61919483-61919502 | None:intergenic | 40.0% |
| !! | AATGGACTACTTCAGAATGC+TGG | + | chr4_3:61919524-61919543 | None:intergenic | 40.0% |
| TGTTAATTTAGGTGTGGAGG+TGG | - | chr4_3:61919723-61919742 | Msa0653740:intron | 40.0% | |
| ! | GCAGAGAGGATGTCATATTT+TGG | - | chr4_3:61919745-61919764 | Msa0653740:intron | 40.0% |
| GAGAAGCAAGTATGATTGTG+TGG | + | chr4_3:61919918-61919937 | None:intergenic | 40.0% | |
| ! | GTCACAACTCAACTTGCTTC+TGG | + | chr4_3:61918958-61918977 | None:intergenic | 45.0% |
| ! | GCACCCAATCTTTGGCTTAA+AGG | + | chr4_3:61919229-61919248 | None:intergenic | 45.0% |
| ! | TTCATAGTTTGTCGGGCCTT+TGG | - | chr4_3:61919390-61919409 | Msa0653740:intron | 45.0% |
| ! | TTGTAGGCTTGTTCCTCCAA+AGG | + | chr4_3:61919409-61919428 | None:intergenic | 45.0% |
| ! | GCGTGAACAAGCTTTAGTTG+TGG | + | chr4_3:61919486-61919505 | None:intergenic | 45.0% |
| ! | ACTAAAGCTTGTTCACGCGA+AGG | - | chr4_3:61919488-61919507 | Msa0653740:intron | 45.0% |
| !! | GTTGCAGTGCTTTGTTTGAG+TGG | + | chr4_3:61919805-61919824 | None:intergenic | 45.0% |
| AGCACCTAACAGAGGAAGTA+GGG | + | chr4_3:61919866-61919885 | None:intergenic | 45.0% | |
| AAGCACCTAACAGAGGAAGT+AGG | + | chr4_3:61919867-61919886 | None:intergenic | 45.0% | |
| !! | GCAATGAAAGCACCTAACAG+AGG | + | chr4_3:61919874-61919893 | None:intergenic | 45.0% |
| ! | GTCACAACTCAACTTGCTTC+TGG | + | chr4_3:61918958-61918977 | None:intergenic | 45.0% |
| ! | GCACCCAATCTTTGGCTTAA+AGG | + | chr4_3:61919229-61919248 | None:intergenic | 45.0% |
| ! | TTCATAGTTTGTCGGGCCTT+TGG | - | chr4_3:61919390-61919409 | Msa0653740:intron | 45.0% |
| ! | TTGTAGGCTTGTTCCTCCAA+AGG | + | chr4_3:61919409-61919428 | None:intergenic | 45.0% |
| ! | GCGTGAACAAGCTTTAGTTG+TGG | + | chr4_3:61919486-61919505 | None:intergenic | 45.0% |
| ! | ACTAAAGCTTGTTCACGCGA+AGG | - | chr4_3:61919488-61919507 | Msa0653740:intron | 45.0% |
| !! | GTTGCAGTGCTTTGTTTGAG+TGG | + | chr4_3:61919805-61919824 | None:intergenic | 45.0% |
| AGCACCTAACAGAGGAAGTA+GGG | + | chr4_3:61919866-61919885 | None:intergenic | 45.0% | |
| AAGCACCTAACAGAGGAAGT+AGG | + | chr4_3:61919867-61919886 | None:intergenic | 45.0% | |
| !! | GCAATGAAAGCACCTAACAG+AGG | + | chr4_3:61919874-61919893 | None:intergenic | 45.0% |
| CCAGATTTGGATCTGATGGC+AGG | + | chr4_3:61919132-61919151 | None:intergenic | 50.0% | |
| CCTGCCATCAGATCCAAATC+TGG | - | chr4_3:61919129-61919148 | Msa0653740:CDS | 50.0% | |
| CTGGTTATTGGCGTTCTGCT+TGG | - | chr4_3:61919148-61919167 | Msa0653740:CDS | 50.0% | |
| AAGCCAAAGATTGGGTGCAG+AGG | - | chr4_3:61919231-61919250 | Msa0653740:CDS | 50.0% | |
| AGCCAAAGATTGGGTGCAGA+GGG | - | chr4_3:61919232-61919251 | Msa0653740:CDS | 50.0% | |
| AACCCTCTGCACCCAATCTT+TGG | + | chr4_3:61919237-61919256 | None:intergenic | 50.0% | |
| ! | ATAGTTTGTCGGGCCTTTGG+AGG | - | chr4_3:61919393-61919412 | Msa0653740:intron | 50.0% |
| GCTTCCCTACTTCCTCTGTT+AGG | - | chr4_3:61919859-61919878 | Msa0653740:CDS | 50.0% | |
| CCAGATTTGGATCTGATGGC+AGG | + | chr4_3:61919132-61919151 | None:intergenic | 50.0% | |
| CCTGCCATCAGATCCAAATC+TGG | - | chr4_3:61919129-61919148 | Msa0653740:CDS | 50.0% | |
| CTGGTTATTGGCGTTCTGCT+TGG | - | chr4_3:61919148-61919167 | Msa0653740:CDS | 50.0% | |
| AAGCCAAAGATTGGGTGCAG+AGG | - | chr4_3:61919231-61919250 | Msa0653740:CDS | 50.0% | |
| AGCCAAAGATTGGGTGCAGA+GGG | - | chr4_3:61919232-61919251 | Msa0653740:CDS | 50.0% | |
| AACCCTCTGCACCCAATCTT+TGG | + | chr4_3:61919237-61919256 | None:intergenic | 50.0% | |
| ! | ATAGTTTGTCGGGCCTTTGG+AGG | - | chr4_3:61919393-61919412 | Msa0653740:intron | 50.0% |
| GCTTCCCTACTTCCTCTGTT+AGG | - | chr4_3:61919859-61919878 | Msa0653740:CDS | 50.0% | |
| TAGGTGTGGAGGTGGCAGAG+AGG | - | chr4_3:61919731-61919750 | Msa0653740:intron | 60.0% | |
| TAGGTGTGGAGGTGGCAGAG+AGG | - | chr4_3:61919731-61919750 | Msa0653740:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 61918836 | 61920167 | 61918836 | ID=Msa0653740;Name=Msa0653740 |
| chr4_3 | mRNA | 61918836 | 61920167 | 61918836 | ID=Msa0653740-mRNA-1;Parent=Msa0653740;Name=Msa0653740-mRNA-1;_AED=0.32;_eAED=0.32;_QI=215|1|1|1|1|1|2|129|144 |
| chr4_3 | exon | 61918836 | 61919269 | 61918836 | ID=Msa0653740-mRNA-1:exon:17123;Parent=Msa0653740-mRNA-1 |
| chr4_3 | exon | 61919823 | 61920167 | 61919823 | ID=Msa0653740-mRNA-1:exon:17122;Parent=Msa0653740-mRNA-1 |
| chr4_3 | five_prime_UTR | 61919953 | 61920167 | 61919953 | ID=Msa0653740-mRNA-1:five_prime_utr;Parent=Msa0653740-mRNA-1 |
| chr4_3 | CDS | 61919823 | 61919952 | 61919823 | ID=Msa0653740-mRNA-1:cds;Parent=Msa0653740-mRNA-1 |
| chr4_3 | CDS | 61918965 | 61919269 | 61918965 | ID=Msa0653740-mRNA-1:cds;Parent=Msa0653740-mRNA-1 |
| chr4_3 | three_prime_UTR | 61918836 | 61918964 | 61918836 | ID=Msa0653740-mRNA-1:three_prime_utr;Parent=Msa0653740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
