Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655020 | XP_013457360.1 | 98.251 | 343 | 6 | 0 | 3 | 345 | 445 | 787 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655020 | sp|O64769|POT11_ARATH | 70.930 | 344 | 95 | 3 | 3 | 345 | 453 | 792 | 7.50e-174 | 505 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0561750 | Msa0655020 | 0.805961 | 1.036407e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655020 | MtrunA17_Chr4g0052401 | 98.251 | 343 | 6 | 0 | 3 | 345 | 445 | 787 | 0.0 | 695 |
| Msa0655020 | MtrunA17_Chr2g0297291 | 78.797 | 349 | 64 | 5 | 3 | 345 | 445 | 789 | 0.0 | 553 |
| Msa0655020 | MtrunA17_Chr2g0297321 | 77.493 | 351 | 69 | 5 | 1 | 345 | 1 | 347 | 0.0 | 543 |
| Msa0655020 | MtrunA17_Chr6g0461871 | 40.984 | 366 | 190 | 3 | 3 | 345 | 423 | 785 | 4.56e-90 | 286 |
| Msa0655020 | MtrunA17_Chr6g0451081 | 40.701 | 371 | 174 | 6 | 2 | 345 | 425 | 776 | 1.02e-86 | 277 |
| Msa0655020 | MtrunA17_Chr5g0429991 | 39.045 | 356 | 200 | 4 | 3 | 345 | 498 | 849 | 2.15e-82 | 267 |
| Msa0655020 | MtrunA17_Chr5g0413721 | 39.660 | 353 | 201 | 4 | 5 | 345 | 519 | 871 | 4.16e-81 | 264 |
| Msa0655020 | MtrunA17_Chr5g0430731 | 39.769 | 347 | 189 | 5 | 3 | 345 | 424 | 754 | 1.19e-80 | 260 |
| Msa0655020 | MtrunA17_Chr3g0128831 | 39.037 | 374 | 196 | 5 | 3 | 345 | 422 | 794 | 1.65e-77 | 253 |
| Msa0655020 | MtrunA17_Chr2g0279131 | 39.275 | 331 | 192 | 3 | 24 | 345 | 519 | 849 | 1.68e-77 | 254 |
| Msa0655020 | MtrunA17_Chr8g0365001 | 39.058 | 361 | 193 | 6 | 3 | 345 | 489 | 840 | 2.47e-76 | 251 |
| Msa0655020 | MtrunA17_Chr8g0387661 | 39.785 | 372 | 190 | 6 | 3 | 345 | 426 | 792 | 1.08e-74 | 245 |
| Msa0655020 | MtrunA17_Chr5g0430571 | 37.464 | 347 | 188 | 6 | 3 | 345 | 214 | 535 | 2.67e-71 | 231 |
| Msa0655020 | MtrunA17_Chr7g0268981 | 34.311 | 341 | 191 | 3 | 3 | 343 | 464 | 771 | 1.51e-68 | 228 |
| Msa0655020 | MtrunA17_Chr4g0055471 | 35.933 | 359 | 213 | 5 | 3 | 345 | 458 | 815 | 2.12e-66 | 223 |
| Msa0655020 | MtrunA17_Chr8g0393241 | 34.795 | 365 | 205 | 7 | 5 | 342 | 438 | 796 | 8.49e-64 | 216 |
| Msa0655020 | MtrunA17_Chr5g0413751 | 48.876 | 178 | 91 | 0 | 1 | 178 | 131 | 308 | 2.72e-60 | 196 |
| Msa0655020 | MtrunA17_Chr8g0365031 | 31.304 | 345 | 172 | 5 | 3 | 343 | 266 | 549 | 1.05e-58 | 198 |
| Msa0655020 | MtrunA17_Chr8g0380281 | 33.333 | 363 | 214 | 5 | 3 | 345 | 428 | 782 | 3.45e-58 | 201 |
| Msa0655020 | MtrunA17_Chr8g0344561 | 32.665 | 349 | 197 | 7 | 3 | 345 | 256 | 572 | 3.95e-58 | 197 |
| Msa0655020 | MtrunA17_Chr8g0344591 | 41.500 | 200 | 109 | 3 | 3 | 198 | 236 | 431 | 8.85e-48 | 167 |
| Msa0655020 | MtrunA17_Chr8g0375411 | 25.146 | 342 | 195 | 6 | 3 | 343 | 415 | 696 | 5.95e-31 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655020 | AT2G35060.2 | 70.930 | 344 | 95 | 3 | 3 | 345 | 454 | 793 | 7.05e-175 | 505 |
| Msa0655020 | AT2G35060.4 | 70.930 | 344 | 95 | 3 | 3 | 345 | 453 | 792 | 7.62e-175 | 505 |
| Msa0655020 | AT2G35060.1 | 70.930 | 344 | 95 | 3 | 3 | 345 | 453 | 792 | 7.62e-175 | 505 |
| Msa0655020 | AT2G35060.3 | 70.930 | 344 | 95 | 3 | 3 | 345 | 453 | 792 | 7.62e-175 | 505 |
| Msa0655020 | AT1G31120.1 | 72.857 | 350 | 83 | 6 | 3 | 345 | 452 | 796 | 1.75e-170 | 494 |
| Msa0655020 | AT4G19960.4 | 63.687 | 358 | 112 | 2 | 3 | 345 | 232 | 586 | 1.07e-143 | 419 |
| Msa0655020 | AT4G19960.2 | 63.687 | 358 | 112 | 2 | 3 | 345 | 453 | 807 | 1.48e-140 | 418 |
| Msa0655020 | AT4G19960.3 | 63.687 | 358 | 112 | 2 | 3 | 345 | 479 | 833 | 2.36e-140 | 418 |
| Msa0655020 | AT4G19960.1 | 63.585 | 357 | 112 | 2 | 4 | 345 | 470 | 823 | 1.05e-139 | 416 |
| Msa0655020 | AT3G02050.1 | 42.391 | 368 | 185 | 4 | 3 | 345 | 424 | 789 | 6.05e-90 | 286 |
| Msa0655020 | AT4G33530.2 | 41.076 | 353 | 198 | 5 | 3 | 345 | 275 | 627 | 3.51e-86 | 272 |
| Msa0655020 | AT4G33530.1 | 41.076 | 353 | 198 | 5 | 3 | 345 | 503 | 855 | 1.81e-84 | 273 |
| Msa0655020 | AT2G40540.1 | 40.214 | 373 | 192 | 6 | 3 | 345 | 423 | 794 | 6.98e-83 | 268 |
| Msa0655020 | AT2G40540.5 | 40.214 | 373 | 192 | 6 | 3 | 345 | 423 | 794 | 6.98e-83 | 268 |
| Msa0655020 | AT2G40540.4 | 40.214 | 373 | 192 | 6 | 3 | 345 | 423 | 794 | 6.98e-83 | 268 |
| Msa0655020 | AT2G40540.2 | 40.214 | 373 | 192 | 6 | 3 | 345 | 423 | 794 | 6.98e-83 | 268 |
| Msa0655020 | AT2G40540.3 | 40.214 | 373 | 192 | 6 | 3 | 345 | 423 | 794 | 6.98e-83 | 268 |
| Msa0655020 | AT1G60160.1 | 37.822 | 349 | 204 | 4 | 3 | 345 | 486 | 827 | 3.51e-82 | 266 |
| Msa0655020 | AT5G09400.1 | 40.616 | 357 | 198 | 4 | 3 | 345 | 502 | 858 | 2.43e-81 | 265 |
| Msa0655020 | AT5G14880.1 | 41.226 | 359 | 191 | 5 | 3 | 345 | 427 | 781 | 3.97e-79 | 257 |
| Msa0655020 | AT4G23640.1 | 38.965 | 367 | 199 | 5 | 3 | 345 | 410 | 775 | 6.99e-79 | 256 |
| Msa0655020 | AT1G70300.1 | 37.017 | 362 | 203 | 4 | 3 | 345 | 427 | 782 | 9.72e-73 | 240 |
| Msa0655020 | AT4G13420.1 | 34.604 | 341 | 215 | 2 | 3 | 343 | 451 | 783 | 3.33e-66 | 223 |
| Msa0655020 | AT2G30070.2 | 51.000 | 200 | 98 | 0 | 3 | 202 | 304 | 503 | 1.77e-65 | 217 |
| Msa0655020 | AT2G30070.2 | 38.961 | 77 | 47 | 0 | 269 | 345 | 516 | 592 | 4.38e-12 | 67.4 |
| Msa0655020 | AT2G30070.1 | 51.000 | 200 | 98 | 0 | 3 | 202 | 424 | 623 | 1.17e-64 | 218 |
| Msa0655020 | AT2G30070.1 | 38.961 | 77 | 47 | 0 | 269 | 345 | 636 | 712 | 5.85e-12 | 67.4 |
Find 81 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGGTATCTCTCTTCTTC+CGG | 0.262164 | 4_3:+63477702 | None:intergenic |
| CTAACAGTGATATTCATATT+TGG | 0.264550 | 4_3:+63477396 | None:intergenic |
| GCTGGGGTGGTTCACATATT+AGG | 0.271225 | 4_3:-63477306 | Msa0655020:CDS |
| ATTATATATATGCATTTCTT+AGG | 0.280181 | 4_3:-63477227 | Msa0655020:CDS |
| TCAGTTGAATACAGTTTATA+TGG | 0.294604 | 4_3:-63477522 | Msa0655020:CDS |
| TTCTTCCGGGACGGTGTAAA+CGG | 0.320283 | 4_3:+63477716 | None:intergenic |
| TTGAATAACTGCGGGGATGC+TGG | 0.330724 | 4_3:-63477324 | Msa0655020:CDS |
| CTCGGGCTTGGCCCAAGTTT+AGG | 0.337026 | 4_3:-63477873 | Msa0655020:CDS |
| CAAGGTATCTCTCTTCTTCC+GGG | 0.346404 | 4_3:+63477703 | None:intergenic |
| CGAAAGATGTGGTAATTCTT+AGG | 0.358981 | 4_3:+63477666 | None:intergenic |
| ATTATGTTTGTCTGGCATTA+CGG | 0.372759 | 4_3:-63477951 | Msa0655020:CDS |
| GTCTCGATGGCATGGATTCT+CGG | 0.378294 | 4_3:-63477891 | Msa0655020:CDS |
| TGGGTTCCTCTTGTAATTGC+CGG | 0.384804 | 4_3:-63477987 | Msa0655020:CDS |
| ATGGCATGGATTCTCGGGCT+TGG | 0.385857 | 4_3:-63477885 | Msa0655020:CDS |
| TTAGGACTTGTTCGTGTACC+TGG | 0.405042 | 4_3:-63477855 | Msa0655020:CDS |
| TGAATAACTGCGGGGATGCT+GGG | 0.408019 | 4_3:-63477323 | Msa0655020:CDS |
| GTGTAGACTAGTCCGATTCC+AGG | 0.417435 | 4_3:+63477837 | None:intergenic |
| ACTCTTCGTCTTTCTTGTGC+AGG | 0.434280 | 4_3:+63477616 | None:intergenic |
| TCTTCCGGGACGGTGTAAAC+GGG | 0.434511 | 4_3:+63477717 | None:intergenic |
| TCTCGATGGCATGGATTCTC+GGG | 0.451131 | 4_3:-63477890 | Msa0655020:CDS |
| CAAATATGAATATCACTGTT+AGG | 0.464445 | 4_3:-63477395 | Msa0655020:CDS |
| ATATCATGATTAAAATCATA+AGG | 0.466363 | 4_3:+63478117 | None:intergenic |
| TTGGCCACTTACTTGACCGC+AGG | 0.482483 | 4_3:+63477371 | None:intergenic |
| CTTGTTCGTGTACCTGGAAT+CGG | 0.484864 | 4_3:-63477849 | Msa0655020:CDS |
| AGATACCTTGTAAAGAGGAT+TGG | 0.486463 | 4_3:-63477690 | Msa0655020:CDS |
| TTTCGATGTGTGGCACGGTA+TGG | 0.488737 | 4_3:-63477648 | Msa0655020:CDS |
| CATTTCTTAGGAAAATATGC+AGG | 0.492742 | 4_3:-63477215 | Msa0655020:CDS |
| TATTGGTGTGGCGCTGCCAC+TGG | 0.494313 | 4_3:-63478097 | Msa0655020:CDS |
| AAGAGAGATACCTTGTAAAG+AGG | 0.504738 | 4_3:-63477695 | Msa0655020:CDS |
| TAGGTCCAATCCTCTTTACA+AGG | 0.508685 | 4_3:+63477685 | None:intergenic |
| GTAATCTTCAAAGTCAATCA+AGG | 0.509932 | 4_3:-63478014 | Msa0655020:CDS |
| CACTTGCTTATCATTGATTG+TGG | 0.513008 | 4_3:-63478057 | Msa0655020:CDS |
| AATGGCATTGCCAGAATGGT+TGG | 0.514440 | 4_3:-63479893 | None:intergenic |
| CAAGCTTAACAAACAGTGAA+AGG | 0.516927 | 4_3:+63477571 | None:intergenic |
| ACACGAACAAGTCCTAAACT+TGG | 0.520151 | 4_3:+63477861 | None:intergenic |
| TCAAAGTCAATCAAGGTGGA+TGG | 0.520473 | 4_3:-63478007 | Msa0655020:CDS |
| CACAGTTGTGATGGCAAGGA+GGG | 0.523327 | 4_3:-63477280 | Msa0655020:CDS |
| TAACTGCGGGGATGCTGGGG+TGG | 0.527079 | 4_3:-63477319 | Msa0655020:CDS |
| ATACAGTTTATATGGACAGC+AGG | 0.539689 | 4_3:-63477514 | Msa0655020:CDS |
| TGTTAAGCTTGAATCTATGA+TGG | 0.539727 | 4_3:-63477559 | Msa0655020:CDS |
| CATGAGAGTCTCTTAAATGT+TGG | 0.554708 | 4_3:-63477165 | Msa0655020:CDS |
| GAATAACTGCGGGGATGCTG+GGG | 0.555595 | 4_3:-63477322 | Msa0655020:CDS |
| ACAACAACAGAATGGATGGC+TGG | 0.560974 | 4_3:+63477762 | None:intergenic |
| AGGCCCTGCGGTCAAGTAAG+TGG | 0.564330 | 4_3:-63477375 | Msa0655020:CDS |
| ACAGTGATATTCATATTTGG+CGG | 0.564984 | 4_3:+63477399 | None:intergenic |
| CAAAGTCAATCAAGGTGGAT+GGG | 0.571604 | 4_3:-63478006 | Msa0655020:CDS |
| CAAGTAAGTGGCCAAACCGA+GGG | 0.574154 | 4_3:-63477363 | Msa0655020:CDS |
| CAACAGAATGGATGGCTGGT+AGG | 0.574816 | 4_3:+63477766 | None:intergenic |
| GTGATATTCATATTTGGCGG+CGG | 0.583068 | 4_3:+63477402 | None:intergenic |
| GTATCTCTCTTCTTCCGGGA+CGG | 0.583221 | 4_3:+63477707 | None:intergenic |
| GTCTACACAGAACTTGCAAG+TGG | 0.583444 | 4_3:-63477822 | Msa0655020:CDS |
| AGAATGGATGGCTGGTAGGT+TGG | 0.583797 | 4_3:+63477770 | None:intergenic |
| CCTTCCCGTTTACACCGTCC+CGG | 0.586257 | 4_3:-63477721 | Msa0655020:CDS |
| ATTAGGAAACACAGTTGTGA+TGG | 0.587624 | 4_3:-63477289 | Msa0655020:CDS |
| GAAACACAGTTGTGATGGCA+AGG | 0.591010 | 4_3:-63477284 | Msa0655020:CDS |
| AGTTTATATGGACAGCAGGA+TGG | 0.599955 | 4_3:-63477510 | Msa0655020:CDS |
| TCAAGTAAGTGGCCAAACCG+AGG | 0.600769 | 4_3:-63477364 | Msa0655020:CDS |
| TTACCACATCTTTCGATGTG+TGG | 0.605821 | 4_3:-63477658 | Msa0655020:CDS |
| CACGAACAAGTCCTAAACTT+GGG | 0.614583 | 4_3:+63477862 | None:intergenic |
| TGGCCACTTACTTGACCGCA+GGG | 0.615367 | 4_3:+63477372 | None:intergenic |
| ATAGTAAAGTCTCGATGGCA+TGG | 0.620677 | 4_3:-63477899 | Msa0655020:CDS |
| AAGCACGACTTCTTCGAATG+TGG | 0.624780 | 4_3:-63477469 | Msa0655020:CDS |
| AATCAATGATAAGCAAGTGA+AGG | 0.625371 | 4_3:+63478061 | None:intergenic |
| ATTTCTTAGGAAAATATGCA+GGG | 0.625694 | 4_3:-63477214 | Msa0655020:CDS |
| AACACTCCGGCAATTACAAG+AGG | 0.633389 | 4_3:+63477981 | None:intergenic |
| AATGCATAGTAAAGTCTCGA+TGG | 0.638063 | 4_3:-63477904 | Msa0655020:CDS |
| AAGCTTGAATCTATGATGGA+AGG | 0.641141 | 4_3:-63477555 | Msa0655020:CDS |
| ACATCTTTCGATGTGTGGCA+CGG | 0.647935 | 4_3:-63477653 | Msa0655020:CDS |
| CCGGGACGGTGTAAACGGGA+AGG | 0.648523 | 4_3:+63477721 | None:intergenic |
| AATATCACTGTTAGGCCCTG+CGG | 0.657194 | 4_3:-63477387 | Msa0655020:CDS |
| ACACAGTTGTGATGGCAAGG+AGG | 0.669872 | 4_3:-63477281 | Msa0655020:CDS |
| TTCGTTAACAGGTACTGCAG+TGG | 0.679357 | 4_3:-63478165 | Msa0655020:intron |
| GTGCCACACATCGAAAGATG+TGG | 0.686236 | 4_3:+63477655 | None:intergenic |
| ATCTTCAAAGTCAATCAAGG+TGG | 0.687512 | 4_3:-63478011 | Msa0655020:CDS |
| GTGATGAAATGAGAAAAGAT+CGG | 0.689117 | 4_3:+63477792 | None:intergenic |
| AAGTAAGTGGCCAAACCGAG+GGG | 0.689786 | 4_3:-63477362 | Msa0655020:CDS |
| ATGAAATGAGAAAAGATCGG+TGG | 0.702922 | 4_3:+63477795 | None:intergenic |
| AGTAAGTGGCCAAACCGAGG+GGG | 0.709182 | 4_3:-63477361 | Msa0655020:CDS |
| ACATTTAAGAGACTCTCATG+AGG | 0.718347 | 4_3:+63477168 | None:intergenic |
| GATGGCGTGTTGAATAACAA+CGG | 0.731429 | 4_3:-63477492 | Msa0655020:CDS |
| AGGCGAGTACAAGTATCCAG+TGG | 0.743797 | 4_3:+63478081 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATCTTTAAATTCTGAA+AGG | + | chr4_3:63477239-63477258 | None:intergenic | 15.0% |
| !! | TTTCAGAATTTAAAGATATA+TGG | - | chr4_3:63477238-63477257 | Msa0655020:CDS | 15.0% |
| !! | ATTGAATTAACATTAAAAAC+AGG | + | chr4_3:63477385-63477404 | None:intergenic | 15.0% |
| !! | AATGAAAATTGTTTCAATAT+TGG | - | chr4_3:63478275-63478294 | Msa0655020:intron | 15.0% |
| !!! | TTCTTTATTTTATTTGGAAT+AGG | + | chr4_3:63478798-63478817 | None:intergenic | 15.0% |
| !! | ATATCATGATTAAAATCATA+AGG | + | chr4_3:63478910-63478929 | None:intergenic | 15.0% |
| !!! | TATGATTTTAATCATGATAT+TGG | - | chr4_3:63478910-63478929 | Msa0655020:intron | 15.0% |
| !!! | TTTTTATTATTATGTTTGTC+TGG | - | chr4_3:63479065-63479084 | Msa0655020:intron | 15.0% |
| !! | ATTATATATATGCATTTCTT+AGG | - | chr4_3:63479797-63479816 | Msa0655020:intron | 15.0% |
| !! | AGGAAATGGTTAAAATTTAA+TGG | + | chr4_3:63477951-63477970 | None:intergenic | 20.0% |
| !!! | TTTCATTTTCATTTTTTAGC+AGG | + | chr4_3:63478262-63478281 | None:intergenic | 20.0% |
| !! | TTGTTATAAAACATACACAT+TGG | - | chr4_3:63478314-63478333 | Msa0655020:intron | 20.0% |
| !! | TGTTATAAAACATACACATT+GGG | - | chr4_3:63478315-63478334 | Msa0655020:intron | 20.0% |
| !! | CATAATAATAAAAAACACTC+CGG | + | chr4_3:63479059-63479078 | None:intergenic | 20.0% |
| !!! | GAGAAAGGTTTTTATTTGTT+TGG | + | chr4_3:63477804-63477823 | None:intergenic | 25.0% |
| ! | CTCATGACGATATTATAATA+AGG | + | chr4_3:63478002-63478021 | None:intergenic | 25.0% |
| !! | ATGTCAAATTTTTACAAGAG+AGG | + | chr4_3:63478357-63478376 | None:intergenic | 25.0% |
| !!! | ACCTTTTTGTTTTGTTTTGT+TGG | - | chr4_3:63478510-63478529 | Msa0655020:intron | 25.0% |
| ! | ACCAACAAAACAAAACAAAA+AGG | + | chr4_3:63478514-63478533 | None:intergenic | 25.0% |
| ! | TGAATTTACAATTCGTTAAC+AGG | - | chr4_3:63478848-63478867 | Msa0655020:intron | 25.0% |
| !! | TTTTAATCATGATATTGGTG+TGG | - | chr4_3:63478915-63478934 | Msa0655020:intron | 25.0% |
| ! | ATACAAAAACAACAACAGAA+TGG | + | chr4_3:63479273-63479292 | None:intergenic | 25.0% |
| ! | TCAGTTGAATACAGTTTATA+TGG | - | chr4_3:63479502-63479521 | Msa0655020:intron | 25.0% |
| ! | CTAACAGTGATATTCATATT+TGG | + | chr4_3:63479631-63479650 | None:intergenic | 25.0% |
| ! | CAAATATGAATATCACTGTT+AGG | - | chr4_3:63479629-63479648 | Msa0655020:intron | 25.0% |
| !! | CTTGAATTTTTGAATAACTG+CGG | - | chr4_3:63479691-63479710 | Msa0655020:intron | 25.0% |
| !! | TTGAATTTTTGAATAACTGC+GGG | - | chr4_3:63479692-63479711 | Msa0655020:intron | 25.0% |
| ! | ATTTCTTAGGAAAATATGCA+GGG | - | chr4_3:63479810-63479829 | Msa0655020:intron | 25.0% |
| TTGAAGACAATCCTTATACT+GGG | + | chr4_3:63477214-63477233 | None:intergenic | 30.0% | |
| TTTGAAGACAATCCTTATAC+TGG | + | chr4_3:63477215-63477234 | None:intergenic | 30.0% | |
| TAGAGATGCAAACAAAATAC+AGG | - | chr4_3:63477280-63477299 | Msa0655020:CDS | 30.0% | |
| TAGAGGGCAAAGAAAAATAA+TGG | + | chr4_3:63477316-63477335 | None:intergenic | 30.0% | |
| CTAAGAACATGCAAAATAGA+GGG | + | chr4_3:63477332-63477351 | None:intergenic | 30.0% | |
| ACTAAGAACATGCAAAATAG+AGG | + | chr4_3:63477333-63477352 | None:intergenic | 30.0% | |
| ATTGTGTCTACGGAATAAAA+TGG | + | chr4_3:63477408-63477427 | None:intergenic | 30.0% | |
| ! | TGGAAGTCTAAAATCCAAAT+TGG | + | chr4_3:63477431-63477450 | None:intergenic | 30.0% |
| ! | ATGTAACTATGAATGCCTTT+TGG | + | chr4_3:63477674-63477693 | None:intergenic | 30.0% |
| AGTCTATATTGCCTATTCAT+TGG | - | chr4_3:63477728-63477747 | Msa0655020:CDS | 30.0% | |
| GTCTATATTGCCTATTCATT+GGG | - | chr4_3:63477729-63477748 | Msa0655020:CDS | 30.0% | |
| TCTATATTGCCTATTCATTG+GGG | - | chr4_3:63477730-63477749 | Msa0655020:CDS | 30.0% | |
| TTTGTTTGGAAAGTCATGAT+AGG | + | chr4_3:63477762-63477781 | None:intergenic | 30.0% | |
| ! | ACTTTTTATCTGCTAGAGAA+AGG | + | chr4_3:63477819-63477838 | None:intergenic | 30.0% |
| AAGGCAAACTAGTTAATTCA+AGG | + | chr4_3:63478196-63478215 | None:intergenic | 30.0% | |
| GACACAAAAAACTCATGATA+TGG | + | chr4_3:63478382-63478401 | None:intergenic | 30.0% | |
| !!! | ATCATGAGTTTTTTGTGTCT+AGG | - | chr4_3:63478383-63478402 | Msa0655020:intron | 30.0% |
| AGCATGGGCATTTAATAATT+GGG | + | chr4_3:63478416-63478435 | None:intergenic | 30.0% | |
| TAGCATGGGCATTTAATAAT+TGG | + | chr4_3:63478417-63478436 | None:intergenic | 30.0% | |
| AATTATTAAATGCCCATGCT+AGG | - | chr4_3:63478416-63478435 | Msa0655020:intron | 30.0% | |
| TTCATGCAGGAGATAAATTA+GGG | + | chr4_3:63478463-63478482 | None:intergenic | 30.0% | |
| ! | TTTTCGCTGTTATAGTTAGT+TGG | + | chr4_3:63478754-63478773 | None:intergenic | 30.0% |
| AATCAATGATAAGCAAGTGA+AGG | + | chr4_3:63478966-63478985 | None:intergenic | 30.0% | |
| GTAATCTTCAAAGTCAATCA+AGG | - | chr4_3:63479010-63479029 | Msa0655020:intron | 30.0% | |
| ATTATGTTTGTCTGGCATTA+CGG | - | chr4_3:63479073-63479092 | Msa0655020:intron | 30.0% | |
| GTGATGAAATGAGAAAAGAT+CGG | + | chr4_3:63479235-63479254 | None:intergenic | 30.0% | |
| AAAAACAACAACAGAATGGA+TGG | + | chr4_3:63479269-63479288 | None:intergenic | 30.0% | |
| TGTTAAGCTTGAATCTATGA+TGG | - | chr4_3:63479465-63479484 | Msa0655020:intron | 30.0% | |
| ACAGTGATATTCATATTTGG+CGG | + | chr4_3:63479628-63479647 | None:intergenic | 30.0% | |
| ! | TGAATTTTTGAATAACTGCG+GGG | - | chr4_3:63479693-63479712 | Msa0655020:intron | 30.0% |
| CATTTCTTAGGAAAATATGC+AGG | - | chr4_3:63479809-63479828 | Msa0655020:intron | 30.0% | |
| TGAAGACAATCCTTATACTG+GGG | + | chr4_3:63477213-63477232 | None:intergenic | 35.0% | |
| CATCTCTACTAAACTAGCTA+AGG | + | chr4_3:63477268-63477287 | None:intergenic | 35.0% | |
| TCCAAATTGGATTGTGTCTA+CGG | + | chr4_3:63477418-63477437 | None:intergenic | 35.0% | |
| CAGACAAATCTGACTTAACA+TGG | + | chr4_3:63477451-63477470 | None:intergenic | 35.0% | |
| ATGCTCAAAACTGTTTCAAG+AGG | - | chr4_3:63477544-63477563 | Msa0655020:CDS | 35.0% | |
| CTATATTGCCTATTCATTGG+GGG | - | chr4_3:63477731-63477750 | Msa0655020:CDS | 35.0% | |
| ! | GAGTTACTGAGAAGTTTGTT+TGG | + | chr4_3:63477776-63477795 | None:intergenic | 35.0% |
| !!! | ATTTAATGGTGCTGCAGTTT+TGG | + | chr4_3:63477937-63477956 | None:intergenic | 35.0% |
| GTTATTTATTCCTGATGTCC+AGG | + | chr4_3:63478046-63478065 | None:intergenic | 35.0% | |
| TTGATTATCCCTTTCACTAG+AGG | + | chr4_3:63478127-63478146 | None:intergenic | 35.0% | |
| AAAGCCTTTCCGTATAATGA+TGG | - | chr4_3:63478158-63478177 | Msa0655020:intron | 35.0% | |
| AAGCCTTTCCGTATAATGAT+GGG | - | chr4_3:63478159-63478178 | Msa0655020:intron | 35.0% | |
| ! | TAACTAGTTTGCCTTTGTGT+TGG | - | chr4_3:63478201-63478220 | Msa0655020:intron | 35.0% |
| CAGAGATAATTCGCTATAAC+AGG | + | chr4_3:63478231-63478250 | None:intergenic | 35.0% | |
| ! | ATATGATTTGTGCCTAGCAT+GGG | + | chr4_3:63478431-63478450 | None:intergenic | 35.0% |
| TCATGCAGGAGATAAATTAG+GGG | + | chr4_3:63478462-63478481 | None:intergenic | 35.0% | |
| GTTCATGCAGGAGATAAATT+AGG | + | chr4_3:63478464-63478483 | None:intergenic | 35.0% | |
| AACAAACATGTAGTTCATGC+AGG | + | chr4_3:63478476-63478495 | None:intergenic | 35.0% | |
| GTTATAGTTAGTTGGTTGTC+CGG | + | chr4_3:63478746-63478765 | None:intergenic | 35.0% | |
| ! | CACTTGCTTATCATTGATTG+TGG | - | chr4_3:63478967-63478986 | Msa0655020:intron | 35.0% |
| ATCTTCAAAGTCAATCAAGG+TGG | - | chr4_3:63479013-63479032 | Msa0655020:intron | 35.0% | |
| AATGCATAGTAAAGTCTCGA+TGG | - | chr4_3:63479120-63479139 | Msa0655020:intron | 35.0% | |
| ATGAAATGAGAAAAGATCGG+TGG | + | chr4_3:63479232-63479251 | None:intergenic | 35.0% | |
| AAGAGAGATACCTTGTAAAG+AGG | - | chr4_3:63479329-63479348 | Msa0655020:intron | 35.0% | |
| AGATACCTTGTAAAGAGGAT+TGG | - | chr4_3:63479334-63479353 | Msa0655020:intron | 35.0% | |
| CGAAAGATGTGGTAATTCTT+AGG | + | chr4_3:63479361-63479380 | None:intergenic | 35.0% | |
| CAAGCTTAACAAACAGTGAA+AGG | + | chr4_3:63479456-63479475 | None:intergenic | 35.0% | |
| ! | AAGCTTGAATCTATGATGGA+AGG | - | chr4_3:63479469-63479488 | Msa0655020:intron | 35.0% |
| ATACAGTTTATATGGACAGC+AGG | - | chr4_3:63479510-63479529 | Msa0655020:intron | 35.0% | |
| ATTAGGAAACACAGTTGTGA+TGG | - | chr4_3:63479735-63479754 | Msa0655020:intron | 35.0% | |
| ACATTTAAGAGACTCTCATG+AGG | + | chr4_3:63479859-63479878 | None:intergenic | 35.0% | |
| CATGAGAGTCTCTTAAATGT+TGG | - | chr4_3:63479859-63479878 | Msa0655020:intron | 35.0% | |
| CTTGACATTACCCCAGTATA+AGG | - | chr4_3:63477200-63477219 | Msa0655020:CDS | 40.0% | |
| TCCGTAGACACAATCCAATT+TGG | - | chr4_3:63477414-63477433 | Msa0655020:CDS | 40.0% | |
| !!! | ATGCCTTTTGGTTCGATGAA+CGG | + | chr4_3:63477662-63477681 | None:intergenic | 40.0% |
| TCATGAGAACCAACATTTCC+TGG | - | chr4_3:63478015-63478034 | Msa0655020:CDS | 40.0% | |
| ATCAAAACCAGGCTTAGCTT+GGG | + | chr4_3:63478096-63478115 | None:intergenic | 40.0% | |
| TGTCCCATCATTATACGGAA+AGG | + | chr4_3:63478165-63478184 | None:intergenic | 40.0% | |
| ! | TTCCGTATAATGATGGGACA+TGG | - | chr4_3:63478165-63478184 | Msa0655020:intron | 40.0% |
| CTCCATGTCCCATCATTATA+CGG | + | chr4_3:63478170-63478189 | None:intergenic | 40.0% | |
| !! | AAGAGAGGCATCTAAATCGA+GGG | + | chr4_3:63478342-63478361 | None:intergenic | 40.0% |
| ! | CATATGATTTGTGCCTAGCA+TGG | + | chr4_3:63478432-63478451 | None:intergenic | 40.0% |
| CATGCAGGAGATAAATTAGG+GGG | + | chr4_3:63478461-63478480 | None:intergenic | 40.0% | |
| CACTGACAATAGTGCAAACA+CGG | - | chr4_3:63478565-63478584 | Msa0655020:intron | 40.0% | |
| CCTAGCAGATGATAAACGAT+GGG | + | chr4_3:63478650-63478669 | None:intergenic | 40.0% | |
| CCATCGTTTATCATCTGCTA+GGG | - | chr4_3:63478648-63478667 | Msa0655020:intron | 40.0% | |
| CATCGTTTATCATCTGCTAG+GGG | - | chr4_3:63478649-63478668 | Msa0655020:intron | 40.0% | |
| CACAACTATAGGGAAAGCTA+CGG | + | chr4_3:63478691-63478710 | None:intergenic | 40.0% | |
| TTGGTCAAGGCACAACTATA+GGG | + | chr4_3:63478701-63478720 | None:intergenic | 40.0% | |
| TCAAAGTCAATCAAGGTGGA+TGG | - | chr4_3:63479017-63479036 | Msa0655020:intron | 40.0% | |
| CAAAGTCAATCAAGGTGGAT+GGG | - | chr4_3:63479018-63479037 | Msa0655020:intron | 40.0% | |
| ATAGTAAAGTCTCGATGGCA+TGG | - | chr4_3:63479125-63479144 | Msa0655020:intron | 40.0% | |
| CACGAACAAGTCCTAAACTT+GGG | + | chr4_3:63479165-63479184 | None:intergenic | 40.0% | |
| ACACGAACAAGTCCTAAACT+TGG | + | chr4_3:63479166-63479185 | None:intergenic | 40.0% | |
| ! | ACAAGGTATCTCTCTTCTTC+CGG | + | chr4_3:63479325-63479344 | None:intergenic | 40.0% |
| TAGGTCCAATCCTCTTTACA+AGG | + | chr4_3:63479342-63479361 | None:intergenic | 40.0% | |
| TTACCACATCTTTCGATGTG+TGG | - | chr4_3:63479366-63479385 | Msa0655020:intron | 40.0% | |
| AGTTTATATGGACAGCAGGA+TGG | - | chr4_3:63479514-63479533 | Msa0655020:intron | 40.0% | |
| GATGGCGTGTTGAATAACAA+CGG | - | chr4_3:63479532-63479551 | Msa0655020:intron | 40.0% | |
| GTGATATTCATATTTGGCGG+CGG | + | chr4_3:63479625-63479644 | None:intergenic | 40.0% | |
| ! | AAATTCAAGTTCATCCCCCT+CGG | + | chr4_3:63479680-63479699 | None:intergenic | 40.0% |
| !!! | TGCCTTTTGGTTCGATGAAC+GGG | + | chr4_3:63477661-63477680 | None:intergenic | 45.0% |
| TATTGCCTATTCATTGGGGG+TGG | - | chr4_3:63477734-63477753 | Msa0655020:CDS | 45.0% | |
| ATGTTAACAGCAGAAGTCGC+AGG | + | chr4_3:63477862-63477881 | None:intergenic | 45.0% | |
| ATGCGAGTGTGTTTATGGCT+GGG | + | chr4_3:63477894-63477913 | None:intergenic | 45.0% | |
| GGATCATGCGAGTGTGTTTA+TGG | + | chr4_3:63477899-63477918 | None:intergenic | 45.0% | |
| !!! | TTTTGGCTTGGTGCTTGTCA+GGG | + | chr4_3:63477920-63477939 | None:intergenic | 45.0% |
| AGGTCGTGTGATAGACAAGA+AGG | + | chr4_3:63477982-63478001 | None:intergenic | 45.0% | |
| CAGGCTTAACCAGGAAATGT+TGG | + | chr4_3:63478027-63478046 | None:intergenic | 45.0% | |
| CAACATTTCCTGGTTAAGCC+TGG | - | chr4_3:63478025-63478044 | Msa0655020:CDS | 45.0% | |
| ! | TCAAAACCAGGCTTAGCTTG+GGG | + | chr4_3:63478095-63478114 | None:intergenic | 45.0% |
| GATCAAAACCAGGCTTAGCT+TGG | + | chr4_3:63478097-63478116 | None:intergenic | 45.0% | |
| !! | CAAGAGAGGCATCTAAATCG+AGG | + | chr4_3:63478343-63478362 | None:intergenic | 45.0% |
| TTGTCAGTGATCCTAAACGC+TGG | + | chr4_3:63478554-63478573 | None:intergenic | 45.0% | |
| AACACGGTCACCAAAAACCA+TGG | - | chr4_3:63478581-63478600 | Msa0655020:intron | 45.0% | |
| CCCATCGTTTATCATCTGCT+AGG | - | chr4_3:63478647-63478666 | Msa0655020:intron | 45.0% | |
| CCCTAGCAGATGATAAACGA+TGG | + | chr4_3:63478651-63478670 | None:intergenic | 45.0% | |
| GTTTATCATCTGCTAGGGGT+TGG | - | chr4_3:63478653-63478672 | Msa0655020:intron | 45.0% | |
| ACTATAGGGAAAGCTACGGA+AGG | + | chr4_3:63478687-63478706 | None:intergenic | 45.0% | |
| GTTGGTCAAGGCACAACTAT+AGG | + | chr4_3:63478702-63478721 | None:intergenic | 45.0% | |
| ! | ATTGGACATGGAGTTGGTCA+AGG | + | chr4_3:63478714-63478733 | None:intergenic | 45.0% |
| TTGACCAACTCCATGTCCAA+TGG | - | chr4_3:63478713-63478732 | Msa0655020:intron | 45.0% | |
| ! | TTCGTTAACAGGTACTGCAG+TGG | - | chr4_3:63478859-63478878 | Msa0655020:intron | 45.0% |
| TGGGTTCCTCTTGTAATTGC+CGG | - | chr4_3:63479037-63479056 | Msa0655020:intron | 45.0% | |
| AACACTCCGGCAATTACAAG+AGG | + | chr4_3:63479046-63479065 | None:intergenic | 45.0% | |
| ! | TTAGGACTTGTTCGTGTACC+TGG | - | chr4_3:63479169-63479188 | Msa0655020:intron | 45.0% |
| CTTGTTCGTGTACCTGGAAT+CGG | - | chr4_3:63479175-63479194 | Msa0655020:intron | 45.0% | |
| GTCTACACAGAACTTGCAAG+TGG | - | chr4_3:63479202-63479221 | Msa0655020:intron | 45.0% | |
| ACAACAACAGAATGGATGGC+TGG | + | chr4_3:63479265-63479284 | None:intergenic | 45.0% | |
| ! | CAAGGTATCTCTCTTCTTCC+GGG | + | chr4_3:63479324-63479343 | None:intergenic | 45.0% |
| ACATCTTTCGATGTGTGGCA+CGG | - | chr4_3:63479371-63479390 | Msa0655020:intron | 45.0% | |
| ACTCTTCGTCTTTCTTGTGC+AGG | + | chr4_3:63479411-63479430 | None:intergenic | 45.0% | |
| AAGCACGACTTCTTCGAATG+TGG | - | chr4_3:63479555-63479574 | Msa0655020:intron | 45.0% | |
| AATATCACTGTTAGGCCCTG+CGG | - | chr4_3:63479637-63479656 | Msa0655020:intron | 45.0% | |
| GAAACACAGTTGTGATGGCA+AGG | - | chr4_3:63479740-63479759 | Msa0655020:intron | 45.0% | |
| !!! | ATTATTTTCTTTATTTTATT+TGG | + | chr4_3:63478804-63478823 | None:intergenic | 5.0% |
| GGAACTTTGATCCATGCCTG+AGG | - | chr4_3:63477565-63477584 | Msa0655020:CDS | 50.0% | |
| TATTTCCAATAGCGCGCCTC+AGG | + | chr4_3:63477584-63477603 | None:intergenic | 50.0% | |
| GTCCCGTTCATCGAACCAAA+AGG | - | chr4_3:63477656-63477675 | Msa0655020:CDS | 50.0% | |
| AGGTACCACCCCCAATGAAT+AGG | + | chr4_3:63477742-63477761 | None:intergenic | 50.0% | |
| GTCGCAGGACTTGACTCTTT+AGG | + | chr4_3:63477847-63477866 | None:intergenic | 50.0% | |
| CATGCGAGTGTGTTTATGGC+TGG | + | chr4_3:63477895-63477914 | None:intergenic | 50.0% | |
| !!! | GTTTTGGCTTGGTGCTTGTC+AGG | + | chr4_3:63477921-63477940 | None:intergenic | 50.0% |
| !!! | ATGGTGCTGCAGTTTTGGCT+TGG | + | chr4_3:63477932-63477951 | None:intergenic | 50.0% |
| AGAAGGCTGCAGCAAGGAAA+TGG | + | chr4_3:63477965-63477984 | None:intergenic | 50.0% | |
| TAGACAAGAAGGCTGCAGCA+AGG | + | chr4_3:63477971-63477990 | None:intergenic | 50.0% | |
| ! | CAAAACCAGGCTTAGCTTGG+GGG | + | chr4_3:63478094-63478113 | None:intergenic | 50.0% |
| TCCCTTTCACTAGAGGCTGA+CGG | + | chr4_3:63478120-63478139 | None:intergenic | 50.0% | |
| TAACAGGCACGCCAACACAA+AGG | + | chr4_3:63478215-63478234 | None:intergenic | 50.0% | |
| ATGCAAGCTTGCCAGCGTTT+AGG | - | chr4_3:63478540-63478559 | Msa0655020:intron | 50.0% | |
| ACGGTCACCAAAAACCATGG+AGG | - | chr4_3:63478584-63478603 | Msa0655020:intron | 50.0% | |
| ! | CCTACTGCCTCCATGGTTTT+TGG | + | chr4_3:63478594-63478613 | None:intergenic | 50.0% |
| CCAAAAACCATGGAGGCAGT+AGG | - | chr4_3:63478591-63478610 | Msa0655020:intron | 50.0% | |
| AAAGTCTCCTACTGCCTCCA+TGG | + | chr4_3:63478601-63478620 | None:intergenic | 50.0% | |
| GCTTCCATTGGACATGGAGT+TGG | + | chr4_3:63478720-63478739 | None:intergenic | 50.0% | |
| CATGTCCAATGGAAGCAAGC+CGG | - | chr4_3:63478724-63478743 | Msa0655020:intron | 50.0% | |
| AGGCGAGTACAAGTATCCAG+TGG | + | chr4_3:63478946-63478965 | None:intergenic | 50.0% | |
| GTCTCGATGGCATGGATTCT+CGG | - | chr4_3:63479133-63479152 | Msa0655020:intron | 50.0% | |
| TCTCGATGGCATGGATTCTC+GGG | - | chr4_3:63479134-63479153 | Msa0655020:intron | 50.0% | |
| ! | GTGTAGACTAGTCCGATTCC+AGG | + | chr4_3:63479190-63479209 | None:intergenic | 50.0% |
| AGAATGGATGGCTGGTAGGT+TGG | + | chr4_3:63479257-63479276 | None:intergenic | 50.0% | |
| CAACAGAATGGATGGCTGGT+AGG | + | chr4_3:63479261-63479280 | None:intergenic | 50.0% | |
| TTCTTCCGGGACGGTGTAAA+CGG | + | chr4_3:63479311-63479330 | None:intergenic | 50.0% | |
| GTATCTCTCTTCTTCCGGGA+CGG | + | chr4_3:63479320-63479339 | None:intergenic | 50.0% | |
| GTGCCACACATCGAAAGATG+TGG | + | chr4_3:63479372-63479391 | None:intergenic | 50.0% | |
| TTTCGATGTGTGGCACGGTA+TGG | - | chr4_3:63479376-63479395 | Msa0655020:intron | 50.0% | |
| TCAAGTAAGTGGCCAAACCG+AGG | - | chr4_3:63479660-63479679 | Msa0655020:intron | 50.0% | |
| CAAGTAAGTGGCCAAACCGA+GGG | - | chr4_3:63479661-63479680 | Msa0655020:intron | 50.0% | |
| AAGTAAGTGGCCAAACCGAG+GGG | - | chr4_3:63479662-63479681 | Msa0655020:intron | 50.0% | |
| TTGAATAACTGCGGGGATGC+TGG | - | chr4_3:63479700-63479719 | Msa0655020:intron | 50.0% | |
| TGAATAACTGCGGGGATGCT+GGG | - | chr4_3:63479701-63479720 | Msa0655020:intron | 50.0% | |
| GCTGGGGTGGTTCACATATT+AGG | - | chr4_3:63479718-63479737 | Msa0655020:intron | 50.0% | |
| ACACAGTTGTGATGGCAAGG+AGG | - | chr4_3:63479743-63479762 | Msa0655020:intron | 50.0% | |
| CACAGTTGTGATGGCAAGGA+GGG | - | chr4_3:63479744-63479763 | Msa0655020:intron | 50.0% | |
| GGTTCGATGAACGGGACTGA+GGG | + | chr4_3:63477653-63477672 | None:intergenic | 55.0% | |
| TGGTTCGATGAACGGGACTG+AGG | + | chr4_3:63477654-63477673 | None:intergenic | 55.0% | |
| CCTGATGTCCAGGCTTAACC+AGG | + | chr4_3:63478036-63478055 | None:intergenic | 55.0% | |
| CCTGGTTAAGCCTGGACATC+AGG | - | chr4_3:63478033-63478052 | Msa0655020:CDS | 55.0% | |
| TGGGGGCAGATCATGCAATC+TGG | + | chr4_3:63478077-63478096 | None:intergenic | 55.0% | |
| AGGCTGACGGGATCAAAACC+AGG | + | chr4_3:63478107-63478126 | None:intergenic | 55.0% | |
| TCCCGTCAGCCTCTAGTGAA+AGG | - | chr4_3:63478115-63478134 | Msa0655020:CDS | 55.0% | |
| CCCTTTCACTAGAGGCTGAC+GGG | + | chr4_3:63478119-63478138 | None:intergenic | 55.0% | |
| CCCGTCAGCCTCTAGTGAAA+GGG | - | chr4_3:63478116-63478135 | Msa0655020:CDS | 55.0% | |
| ! | CGGCTTGCTTCCATTGGACA+TGG | + | chr4_3:63478726-63478745 | None:intergenic | 55.0% |
| ! | GTTGTCCGGCTTGCTTCCAT+TGG | + | chr4_3:63478732-63478751 | None:intergenic | 55.0% |
| ATGGCATGGATTCTCGGGCT+TGG | - | chr4_3:63479139-63479158 | Msa0655020:intron | 55.0% | |
| TCTTCCGGGACGGTGTAAAC+GGG | + | chr4_3:63479310-63479329 | None:intergenic | 55.0% | |
| TGGCCACTTACTTGACCGCA+GGG | + | chr4_3:63479655-63479674 | None:intergenic | 55.0% | |
| TTGGCCACTTACTTGACCGC+AGG | + | chr4_3:63479656-63479675 | None:intergenic | 55.0% | |
| AGTAAGTGGCCAAACCGAGG+GGG | - | chr4_3:63479663-63479682 | Msa0655020:intron | 55.0% | |
| CAAGTTCATCCCCCTCGGTT+TGG | + | chr4_3:63479675-63479694 | None:intergenic | 55.0% | |
| GAATAACTGCGGGGATGCTG+GGG | - | chr4_3:63479702-63479721 | Msa0655020:intron | 55.0% | |
| ATCTGCCCCCAAGCTAAGCC+TGG | - | chr4_3:63478086-63478105 | Msa0655020:CDS | 60.0% | |
| TATTGGTGTGGCGCTGCCAC+TGG | - | chr4_3:63478927-63478946 | Msa0655020:intron | 60.0% | |
| CTCGGGCTTGGCCCAAGTTT+AGG | - | chr4_3:63479151-63479170 | Msa0655020:intron | 60.0% | |
| CCTTCCCGTTTACACCGTCC+CGG | - | chr4_3:63479303-63479322 | Msa0655020:intron | 60.0% | |
| AGGCCCTGCGGTCAAGTAAG+TGG | - | chr4_3:63479649-63479668 | Msa0655020:intron | 60.0% | |
| CCAATAGCGCGCCTCAGGCA+TGG | + | chr4_3:63477579-63477598 | None:intergenic | 65.0% | |
| CCATGCCTGAGGCGCGCTAT+TGG | - | chr4_3:63477576-63477595 | Msa0655020:CDS | 65.0% | |
| CCGGGACGGTGTAAACGGGA+AGG | + | chr4_3:63479306-63479325 | None:intergenic | 65.0% | |
| TAACTGCGGGGATGCTGGGG+TGG | - | chr4_3:63479705-63479724 | Msa0655020:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 63477146 | 63479900 | 63477146 | ID=Msa0655020;Name=Msa0655020 |
| chr4_3 | mRNA | 63477146 | 63479900 | 63477146 | ID=Msa0655020-mRNA-1;Parent=Msa0655020;Name=Msa0655020-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.5|0|1|2|0|345 |
| chr4_3 | exon | 63479894 | 63479900 | 63479894 | ID=Msa0655020-mRNA-1:exon:17872;Parent=Msa0655020-mRNA-1 |
| chr4_3 | exon | 63477146 | 63478176 | 63477146 | ID=Msa0655020-mRNA-1:exon:17871;Parent=Msa0655020-mRNA-1 |
| chr4_3 | CDS | 63479894 | 63479900 | 63479894 | ID=Msa0655020-mRNA-1:cds;Parent=Msa0655020-mRNA-1 |
| chr4_3 | CDS | 63477146 | 63478176 | 63477146 | ID=Msa0655020-mRNA-1:cds;Parent=Msa0655020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
