Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655390 | XP_013457399.1 | 98.560 | 486 | 7 | 0 | 1 | 486 | 1 | 486 | 0.0 | 995 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655390 | sp|Q8GX46|BH091_ARATH | 36.047 | 516 | 197 | 12 | 11 | 483 | 1 | 426 | 3.34e-89 | 282 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655390 | G8A1V6 | 98.560 | 486 | 7 | 0 | 1 | 486 | 1 | 486 | 0.0 | 995 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0655390 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0561870 | Msa0655390 | 0.993952 | 1.903791e-203 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655390 | MtrunA17_Chr4g0052841 | 98.560 | 486 | 7 | 0 | 1 | 486 | 1 | 486 | 0.0 | 995 |
| Msa0655390 | MtrunA17_Chr4g0052821 | 79.596 | 495 | 73 | 8 | 1 | 482 | 1 | 480 | 0.0 | 742 |
| Msa0655390 | MtrunA17_Chr3g0131691 | 28.643 | 199 | 129 | 5 | 278 | 470 | 285 | 476 | 2.22e-16 | 81.6 |
| Msa0655390 | MtrunA17_Chr0c01g0489461 | 24.500 | 200 | 134 | 3 | 293 | 477 | 197 | 394 | 1.24e-12 | 69.3 |
| Msa0655390 | MtrunA17_Chr1g0185621 | 30.872 | 149 | 85 | 4 | 293 | 433 | 476 | 614 | 2.98e-12 | 68.9 |
| Msa0655390 | MtrunA17_Chr8g0346161 | 28.049 | 164 | 83 | 5 | 293 | 443 | 292 | 433 | 5.06e-12 | 67.8 |
| Msa0655390 | MtrunA17_Chr7g0252041 | 24.468 | 188 | 129 | 4 | 291 | 470 | 285 | 467 | 1.75e-11 | 66.2 |
| Msa0655390 | MtrunA17_Chr8g0366751 | 31.579 | 171 | 110 | 3 | 293 | 460 | 463 | 629 | 2.62e-11 | 65.9 |
| Msa0655390 | MtrunA17_Chr5g0411341 | 29.630 | 189 | 117 | 5 | 293 | 471 | 494 | 676 | 6.90e-11 | 64.7 |
| Msa0655390 | MtrunA17_Chr8g0346151 | 30.968 | 155 | 93 | 6 | 293 | 443 | 280 | 424 | 7.58e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655390 | AT2G31210.1 | 36.047 | 516 | 197 | 12 | 11 | 483 | 1 | 426 | 3.40e-90 | 282 |
| Msa0655390 | AT2G31220.1 | 36.257 | 513 | 209 | 15 | 16 | 481 | 2 | 443 | 3.55e-82 | 262 |
| Msa0655390 | AT2G31220.2 | 36.257 | 513 | 209 | 15 | 16 | 481 | 13 | 454 | 4.28e-82 | 262 |
| Msa0655390 | AT1G06170.2 | 37.832 | 489 | 199 | 17 | 11 | 480 | 6 | 408 | 5.54e-82 | 260 |
| Msa0655390 | AT1G06170.1 | 37.832 | 489 | 199 | 17 | 11 | 480 | 6 | 408 | 5.54e-82 | 260 |
| Msa0655390 | AT2G31215.1 | 50.704 | 71 | 35 | 0 | 284 | 354 | 15 | 85 | 1.03e-14 | 71.2 |
| Msa0655390 | AT3G26744.1 | 26.738 | 187 | 126 | 4 | 291 | 471 | 306 | 487 | 3.13e-12 | 68.9 |
| Msa0655390 | AT3G26744.4 | 26.738 | 187 | 126 | 4 | 291 | 471 | 306 | 487 | 3.13e-12 | 68.9 |
| Msa0655390 | AT3G26744.2 | 26.738 | 187 | 126 | 4 | 291 | 471 | 306 | 487 | 3.13e-12 | 68.9 |
| Msa0655390 | AT3G26744.6 | 27.976 | 168 | 111 | 3 | 291 | 453 | 306 | 468 | 4.16e-12 | 68.6 |
| Msa0655390 | AT1G32640.1 | 29.592 | 196 | 102 | 7 | 261 | 437 | 410 | 588 | 4.47e-12 | 68.9 |
| Msa0655390 | AT1G12860.2 | 27.439 | 164 | 113 | 3 | 291 | 453 | 266 | 424 | 5.89e-12 | 67.8 |
| Msa0655390 | AT3G24140.1 | 25.000 | 204 | 130 | 5 | 293 | 477 | 199 | 398 | 6.64e-12 | 67.8 |
| Msa0655390 | AT3G24140.2 | 25.000 | 204 | 130 | 5 | 293 | 477 | 199 | 398 | 8.35e-12 | 67.4 |
| Msa0655390 | AT5G46760.1 | 34.459 | 148 | 85 | 4 | 293 | 437 | 416 | 554 | 2.03e-11 | 66.6 |
| Msa0655390 | AT1G12860.1 | 29.054 | 148 | 99 | 3 | 291 | 437 | 266 | 408 | 2.16e-11 | 66.2 |
| Msa0655390 | AT4G17880.1 | 32.215 | 149 | 83 | 5 | 293 | 437 | 417 | 551 | 9.44e-11 | 64.7 |
Find 137 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCATTGAATTATGAAAAT+TGG | 0.123720 | 4_3:-64031629 | None:intergenic |
| GATGGAGGGAGATGGGGATA+TGG | 0.225091 | 4_3:+64031840 | Msa0655390:CDS |
| GACATCAACCTCACTGTCTT+TGG | 0.255758 | 4_3:-64032469 | None:intergenic |
| GTTGTTTGTGTTGTTATCAT+TGG | 0.285682 | 4_3:-64031143 | None:intergenic |
| GGACCCTAGTGTTCAGGATA+TGG | 0.288747 | 4_3:+64031387 | Msa0655390:CDS |
| CTGTTTACCTTGGTGGGACT+TGG | 0.305763 | 4_3:-64031997 | None:intergenic |
| GCTGTTTGTGTCCAAGGTTT+TGG | 0.309859 | 4_3:+64032551 | Msa0655390:CDS |
| GTCATTGAATTATGAAAATT+GGG | 0.338556 | 4_3:-64031628 | None:intergenic |
| AGTGAATGAACTGAAATTAT+TGG | 0.342875 | 4_3:+64032314 | Msa0655390:CDS |
| GAGGTTCTTATACTTCCATC+TGG | 0.345071 | 4_3:-64032429 | None:intergenic |
| AGGGATTGTAGCTTTGGTTA+TGG | 0.348857 | 4_3:-64031480 | None:intergenic |
| TTGGAACTTCACCATGTTGC+AGG | 0.353487 | 4_3:+64032585 | Msa0655390:CDS |
| CAGATAGTTGGTGATGTTCT+TGG | 0.359747 | 4_3:-64031423 | None:intergenic |
| CAAAACATGCATGAACAAAA+TGG | 0.364773 | 4_3:+64031076 | Msa0655390:CDS |
| AGCTGTAACATAAAGCCTTT+TGG | 0.367904 | 4_3:+64032402 | Msa0655390:CDS |
| CTCCACAGCCTCCAGCTCTC+AGG | 0.376170 | 4_3:+64031737 | Msa0655390:CDS |
| ATTGAACAACAACAAAATCT+TGG | 0.381255 | 4_3:+64031292 | Msa0655390:CDS |
| ATGGAGGGAGATGGGGATAT+GGG | 0.387229 | 4_3:+64031841 | Msa0655390:CDS |
| GTGATGAGATGGAGGGAGAT+GGG | 0.388952 | 4_3:+64031833 | Msa0655390:CDS |
| TGGGAGTGCTGGAATTCAAT+AGG | 0.389828 | 4_3:+64031860 | Msa0655390:CDS |
| ATGGTTATCCATGTTGTTGT+AGG | 0.394415 | 4_3:-64031332 | None:intergenic |
| TGGTCGAGGGATTGTAGCTT+TGG | 0.400036 | 4_3:-64031486 | None:intergenic |
| AATTGGGTGGATTCTGAGTT+GGG | 0.404029 | 4_3:-64031612 | None:intergenic |
| GATGTTTCCACTTATACAAA+TGG | 0.405425 | 4_3:+64031247 | Msa0655390:CDS |
| CAACAGGGTGATTGATGTTA+TGG | 0.412367 | 4_3:+64032788 | Msa0655390:CDS |
| TTTCTTGGAGACCTTCCAAT+AGG | 0.414923 | 4_3:+64031652 | Msa0655390:CDS |
| CAAAATCTTGGTTTGAACAT+AGG | 0.414981 | 4_3:+64031304 | Msa0655390:CDS |
| TTTCTCAGTTGCAAAATGTT+TGG | 0.419556 | 4_3:-64031923 | None:intergenic |
| TTGTTTGTGTTGTTATCATT+GGG | 0.420602 | 4_3:-64031142 | None:intergenic |
| TTGCTTGCTGTTTGTGTCCA+AGG | 0.421896 | 4_3:+64032545 | Msa0655390:CDS |
| AAAATCTTGGTTTGAACATA+GGG | 0.427616 | 4_3:+64031305 | Msa0655390:CDS |
| TCCCTGAGAGCTGGAGGCTG+TGG | 0.430359 | 4_3:-64031739 | None:intergenic |
| ACACCTTCATCCATTGTGTT+GGG | 0.431032 | 4_3:-64031109 | None:intergenic |
| CAACAACATGGATAACCATT+TGG | 0.435263 | 4_3:+64031336 | Msa0655390:CDS |
| GAGTTGGGACCCTAGTGTTC+AGG | 0.436779 | 4_3:+64031381 | Msa0655390:CDS |
| GATATTGTTGTTCAGATAGT+TGG | 0.438953 | 4_3:-64031435 | None:intergenic |
| GGTGATGAGATGGAGGGAGA+TGG | 0.442415 | 4_3:+64031832 | Msa0655390:CDS |
| ATGCAAGTGCTATAGCCAAC+AGG | 0.446313 | 4_3:+64032772 | Msa0655390:CDS |
| GTGTTGTCTGATGATCCTAT+TGG | 0.454473 | 4_3:-64031667 | None:intergenic |
| AGTGAATCCATTTGTATAAG+TGG | 0.457197 | 4_3:-64031254 | None:intergenic |
| AGATGGGGATATGGGAGTGC+TGG | 0.457752 | 4_3:+64031849 | Msa0655390:CDS |
| ATGCCAACCAACTCGAGAAA+TGG | 0.461019 | 4_3:+64031793 | Msa0655390:CDS |
| ATAGCAATGAGTTCAGGTTC+AGG | 0.465445 | 4_3:+64031046 | None:intergenic |
| TTATTGCTGTTTACCTTGGT+GGG | 0.467259 | 4_3:-64032003 | None:intergenic |
| AACACCTTCATCCATTGTGT+TGG | 0.467861 | 4_3:-64031110 | None:intergenic |
| CAAAGAAGAGAGCAATTGAA+TGG | 0.475530 | 4_3:+64031946 | Msa0655390:CDS |
| TAACATCATCATCGATAATC+CGG | 0.477440 | 4_3:-64032491 | None:intergenic |
| GATACACTTCTTGTACCAAA+TGG | 0.479122 | 4_3:-64031351 | None:intergenic |
| CGGTGGAGGTGATGAGATGG+AGG | 0.480339 | 4_3:+64031825 | Msa0655390:CDS |
| GGAAGGTTCAAAGGATATAG+AGG | 0.481991 | 4_3:-64031715 | None:intergenic |
| CAAACTGTTTCAGAGGAAGA+AGG | 0.489618 | 4_3:+64032518 | Msa0655390:CDS |
| TGTTTACCTTGGTGGGACTT+GGG | 0.491389 | 4_3:-64031996 | None:intergenic |
| CTTCCATCTGGGTCACCAAA+AGG | 0.496925 | 4_3:-64032417 | None:intergenic |
| GCTTCTGTTGGCAAAGGAAG+AGG | 0.497466 | 4_3:+64031889 | Msa0655390:CDS |
| AAGAGAACCATTTCTCGAGT+TGG | 0.498637 | 4_3:-64031800 | None:intergenic |
| GGGAGTGCTGGAATTCAATA+GGG | 0.499086 | 4_3:+64031861 | Msa0655390:CDS |
| TTTATTGCTGTTTACCTTGG+TGG | 0.500865 | 4_3:-64032004 | None:intergenic |
| AGTTGGGTTTGTCATGCAAA+TGG | 0.506829 | 4_3:-64031596 | None:intergenic |
| TTGAGAAGGTTAAGGACATC+CGG | 0.515412 | 4_3:-64031532 | None:intergenic |
| AGACAAATAGCAATGAGTTC+AGG | 0.516206 | 4_3:+64031040 | None:intergenic |
| CTGAGAGCTGGAGGCTGTGG+AGG | 0.518825 | 4_3:-64031736 | None:intergenic |
| AGTGTATCAGAACTCGAGTT+GGG | 0.519237 | 4_3:+64031366 | Msa0655390:CDS |
| AGCATCTAGGTAAGTTGAGA+AGG | 0.519406 | 4_3:-64031546 | None:intergenic |
| GGAGAAGAAAAGACATGGGA+GGG | 0.519783 | 4_3:+64032338 | Msa0655390:CDS |
| GACTACAGCCTACTTGTATG+TGG | 0.520235 | 4_3:-64032834 | None:intergenic |
| TCACTGATGCAGGTAAATGA+AGG | 0.521271 | 4_3:+64032738 | Msa0655390:intron |
| TCCACAGCCTCCAGCTCTCA+GGG | 0.522645 | 4_3:+64031738 | Msa0655390:CDS |
| AGACCCTCATTACCCTTCAC+CGG | 0.523695 | 4_3:+64031513 | Msa0655390:CDS |
| TAGTTTCTTGTTCAATAGCA+AGG | 0.524699 | 4_3:+64032629 | Msa0655390:CDS |
| TGATGAGATGGAGGGAGATG+GGG | 0.524823 | 4_3:+64031834 | Msa0655390:CDS |
| GAGCTGGAGGCTGTGGAGGA+AGG | 0.524927 | 4_3:-64031732 | None:intergenic |
| AATAGGGTCACTGCTTCTGT+TGG | 0.528001 | 4_3:+64031877 | Msa0655390:CDS |
| TGAAACAATTCCCTGAGAGC+TGG | 0.529234 | 4_3:-64031748 | None:intergenic |
| GAATTTCAAGCCTTCTGTAG+AGG | 0.532912 | 4_3:+64031183 | Msa0655390:CDS |
| AAATTGGGTGGATTCTGAGT+TGG | 0.535004 | 4_3:-64031613 | None:intergenic |
| CTGAAGTTCATCCAAAACCT+TGG | 0.538751 | 4_3:-64032562 | None:intergenic |
| GGCTGTGGAGGAAGGTTCAA+AGG | 0.549237 | 4_3:-64031724 | None:intergenic |
| TAGGTAAGTTGAGAAGGTTA+AGG | 0.550958 | 4_3:-64031540 | None:intergenic |
| ATGAGGGTCTAGAATGGTCG+AGG | 0.552417 | 4_3:-64031500 | None:intergenic |
| ACATCCGGTGAAGGGTAATG+AGG | 0.553656 | 4_3:-64031517 | None:intergenic |
| GATCCCAACACAATGGATGA+AGG | 0.553830 | 4_3:+64031106 | Msa0655390:CDS |
| GAACCATTTCTCGAGTTGGT+TGG | 0.554382 | 4_3:-64031796 | None:intergenic |
| TTTGTCATGCAAATGGTGGA+TGG | 0.555450 | 4_3:-64031589 | None:intergenic |
| TGGAAAGTACAAAATCTTGA+GGG | 0.560743 | 4_3:+64031966 | Msa0655390:CDS |
| AGGTTAAGGACATCCGGTGA+AGG | 0.563045 | 4_3:-64031526 | None:intergenic |
| TAATCCATATCCTGAACACT+AGG | 0.565325 | 4_3:-64031391 | None:intergenic |
| AGGTTCTTATACTTCCATCT+GGG | 0.566449 | 4_3:-64032428 | None:intergenic |
| AAGACAGTGAGGTTGATGTC+CGG | 0.567804 | 4_3:+64032472 | Msa0655390:CDS |
| ATGGAAAGTACAAAATCTTG+AGG | 0.570741 | 4_3:+64031965 | Msa0655390:CDS |
| TTACAATCAAACTGTTTCAG+AGG | 0.573969 | 4_3:+64032511 | Msa0655390:CDS |
| ATTGAATTATGAAAATTGGG+TGG | 0.575295 | 4_3:-64031625 | None:intergenic |
| AGCAAAGATGAAGAGCATCT+AGG | 0.580041 | 4_3:-64031559 | None:intergenic |
| GTCACTGCTTCTGTTGGCAA+AGG | 0.580434 | 4_3:+64031883 | Msa0655390:CDS |
| TTTCGGTGGAGGTGATGAGA+TGG | 0.581094 | 4_3:+64031822 | Msa0655390:CDS |
| ACTGATAGAGCATCAGTGGT+TGG | 0.582304 | 4_3:+64032255 | Msa0655390:CDS |
| AACAATTCCCTGAGAGCTGG+AGG | 0.583698 | 4_3:-64031745 | None:intergenic |
| ATGGACACACAATATGCGGC+AGG | 0.587315 | 4_3:+64032807 | Msa0655390:CDS |
| TGGAGAAGAAAAGACATGGG+AGG | 0.590953 | 4_3:+64032337 | Msa0655390:CDS |
| AGGGTAATGAGGGTCTAGAA+TGG | 0.594794 | 4_3:-64031506 | None:intergenic |
| CAGGTCTTCCACATACAAGT+AGG | 0.601555 | 4_3:+64032826 | Msa0655390:CDS |
| GAATGAACTGAAATTATTGG+TGG | 0.601922 | 4_3:+64032317 | Msa0655390:CDS |
| CATGTTGCAGGTGGACATGT+TGG | 0.603051 | 4_3:+64032597 | Msa0655390:CDS |
| AAGTGTATCAGAACTCGAGT+TGG | 0.603471 | 4_3:+64031365 | Msa0655390:CDS |
| TTGTTCAATGTCTACTGATG+AGG | 0.603690 | 4_3:-64031278 | None:intergenic |
| GGATTTCCTCTGCAGCCATG+AGG | 0.604351 | 4_3:-64032448 | None:intergenic |
| GAACTTCACCATGTTGCAGG+TGG | 0.605562 | 4_3:+64032588 | Msa0655390:CDS |
| TATAAGTGGAAACATCATCA+AGG | 0.606570 | 4_3:-64031240 | None:intergenic |
| GGTTAAGGACATCCGGTGAA+GGG | 0.607008 | 4_3:-64031525 | None:intergenic |
| TAAGAACCTCATGGCTGCAG+AGG | 0.607611 | 4_3:+64032442 | Msa0655390:CDS |
| CATAACATCAATCACCCTGT+TGG | 0.611438 | 4_3:-64032787 | None:intergenic |
| CAACATGTCCACCTGCAACA+TGG | 0.611970 | 4_3:-64032596 | None:intergenic |
| CATCCGGTGAAGGGTAATGA+GGG | 0.612093 | 4_3:-64031516 | None:intergenic |
| AGACAACACAAGCGGATCAT+CGG | 0.616516 | 4_3:+64031681 | Msa0655390:CDS |
| TGGGTTTGTCATGCAAATGG+TGG | 0.620066 | 4_3:-64031593 | None:intergenic |
| GCAGACTGATAGAGCATCAG+TGG | 0.620695 | 4_3:+64032251 | Msa0655390:intron |
| TGTTCAATGTCTACTGATGA+GGG | 0.621545 | 4_3:-64031277 | None:intergenic |
| TTGGTGGAGAAGAAAAGACA+TGG | 0.622445 | 4_3:+64032333 | Msa0655390:CDS |
| AAGGCTTGAAATTCTCGTCA+AGG | 0.622448 | 4_3:-64031174 | None:intergenic |
| TAAGGTAGTTCCTCTACAGA+AGG | 0.625311 | 4_3:-64031193 | None:intergenic |
| TGGTGGAGAAGAAAAGACAT+GGG | 0.628796 | 4_3:+64032334 | Msa0655390:CDS |
| TGTCTGATGATCCTATTGGA+AGG | 0.634988 | 4_3:-64031663 | None:intergenic |
| GGTGGAGGTGATGAGATGGA+GGG | 0.644636 | 4_3:+64031826 | Msa0655390:CDS |
| TGCAAGTGCTATAGCCAACA+GGG | 0.647996 | 4_3:+64032773 | Msa0655390:CDS |
| TCTGTTGGCAAAGGAAGAGG+AGG | 0.650064 | 4_3:+64031892 | Msa0655390:CDS |
| GAAGGTTCAAAGGATATAGA+GGG | 0.652826 | 4_3:-64031714 | None:intergenic |
| ATGGAAGTATAAGAACCTCA+TGG | 0.653640 | 4_3:+64032433 | Msa0655390:CDS |
| AATCCATATCCTGAACACTA+GGG | 0.654503 | 4_3:-64031390 | None:intergenic |
| ACAATATCAACAATTTATCG+AGG | 0.665388 | 4_3:+64031450 | Msa0655390:CDS |
| TTGTTTCAATCTCTGCCTCG+AGG | 0.665573 | 4_3:+64031763 | Msa0655390:CDS |
| GGATCATCAGACAACACAAG+CGG | 0.678009 | 4_3:+64031673 | Msa0655390:CDS |
| AGGGAATACCTACAACAACA+TGG | 0.679432 | 4_3:+64031324 | Msa0655390:CDS |
| TTGCTTTGATCCCAACACAA+TGG | 0.687353 | 4_3:+64031099 | Msa0655390:CDS |
| TCTCATCCCAAGTCCCACCA+AGG | 0.687512 | 4_3:+64031990 | Msa0655390:CDS |
| TGTTATGGACACACAATATG+CGG | 0.695276 | 4_3:+64032803 | Msa0655390:CDS |
| TGAGGGTCTAGAATGGTCGA+GGG | 0.709529 | 4_3:-64031499 | None:intergenic |
| GAGGAAATCCAAAGACAGTG+AGG | 0.714492 | 4_3:+64032461 | Msa0655390:CDS |
| GTTGGCATGCTATAGCCTCG+AGG | 0.726151 | 4_3:-64031778 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATAGATAAAATTATACA+TGG | - | chr4_3:64032050-64032069 | None:intergenic | 15.0% |
| !! | TGGTTATATATTAAACTATA+AGG | + | chr4_3:64032711-64032730 | Msa0655390:intron | 15.0% |
| !! | TTCATAGATAAAATTATACA+TGG | - | chr4_3:64032050-64032069 | None:intergenic | 15.0% |
| !! | TGGTTATATATTAAACTATA+AGG | + | chr4_3:64032711-64032730 | Msa0655390:intron | 15.0% |
| !! | GTCATTGAATTATGAAAATT+GGG | - | chr4_3:64031631-64031650 | None:intergenic | 20.0% |
| !! | AGTCATTGAATTATGAAAAT+TGG | - | chr4_3:64031632-64031651 | None:intergenic | 20.0% |
| !!! | TTGAGTCTTGAATTATTTTA+AGG | + | chr4_3:64032110-64032129 | Msa0655390:intron | 20.0% |
| !!! | CTATTTGTTACAATGATTAA+CGG | + | chr4_3:64032212-64032231 | Msa0655390:intron | 20.0% |
| !! | TAGAATCATTACATTTGATT+TGG | + | chr4_3:64032691-64032710 | Msa0655390:intron | 20.0% |
| !! | GTCATTGAATTATGAAAATT+GGG | - | chr4_3:64031631-64031650 | None:intergenic | 20.0% |
| !! | AGTCATTGAATTATGAAAAT+TGG | - | chr4_3:64031632-64031651 | None:intergenic | 20.0% |
| !!! | TTGAGTCTTGAATTATTTTA+AGG | + | chr4_3:64032110-64032129 | Msa0655390:intron | 20.0% |
| !!! | CTATTTGTTACAATGATTAA+CGG | + | chr4_3:64032212-64032231 | Msa0655390:intron | 20.0% |
| !! | TAGAATCATTACATTTGATT+TGG | + | chr4_3:64032691-64032710 | Msa0655390:intron | 20.0% |
| !! | TTGTTTGTGTTGTTATCATT+GGG | - | chr4_3:64031145-64031164 | None:intergenic | 25.0% |
| ! | ATTGAACAACAACAAAATCT+TGG | + | chr4_3:64031292-64031311 | Msa0655390:CDS | 25.0% |
| !! | AAAATCTTGGTTTGAACATA+GGG | + | chr4_3:64031305-64031324 | Msa0655390:CDS | 25.0% |
| ! | ACAATATCAACAATTTATCG+AGG | + | chr4_3:64031450-64031469 | Msa0655390:CDS | 25.0% |
| ! | ATTGAATTATGAAAATTGGG+TGG | - | chr4_3:64031628-64031647 | None:intergenic | 25.0% |
| !! | CATAATTCAATGACTTTTCT+TGG | + | chr4_3:64031637-64031656 | Msa0655390:CDS | 25.0% |
| ! | AAGACTCAACATATATCAAT+TGG | - | chr4_3:64032099-64032118 | None:intergenic | 25.0% |
| !!! | AATATTGTTGTGTCACTTAT+TGG | + | chr4_3:64032158-64032177 | Msa0655390:intron | 25.0% |
| ! | TAGAGATTCAAATTGTGAAA+CGG | - | chr4_3:64032195-64032214 | None:intergenic | 25.0% |
| ! | AGTGAATGAACTGAAATTAT+TGG | + | chr4_3:64032314-64032333 | Msa0655390:CDS | 25.0% |
| !! | TTGTTTGTGTTGTTATCATT+GGG | - | chr4_3:64031145-64031164 | None:intergenic | 25.0% |
| ! | ATTGAACAACAACAAAATCT+TGG | + | chr4_3:64031292-64031311 | Msa0655390:CDS | 25.0% |
| !! | AAAATCTTGGTTTGAACATA+GGG | + | chr4_3:64031305-64031324 | Msa0655390:CDS | 25.0% |
| ! | ACAATATCAACAATTTATCG+AGG | + | chr4_3:64031450-64031469 | Msa0655390:CDS | 25.0% |
| ! | ATTGAATTATGAAAATTGGG+TGG | - | chr4_3:64031628-64031647 | None:intergenic | 25.0% |
| !! | CATAATTCAATGACTTTTCT+TGG | + | chr4_3:64031637-64031656 | Msa0655390:CDS | 25.0% |
| ! | AAGACTCAACATATATCAAT+TGG | - | chr4_3:64032099-64032118 | None:intergenic | 25.0% |
| !!! | AATATTGTTGTGTCACTTAT+TGG | + | chr4_3:64032158-64032177 | Msa0655390:intron | 25.0% |
| ! | TAGAGATTCAAATTGTGAAA+CGG | - | chr4_3:64032195-64032214 | None:intergenic | 25.0% |
| ! | AGTGAATGAACTGAAATTAT+TGG | + | chr4_3:64032314-64032333 | Msa0655390:CDS | 25.0% |
| CAAAACATGCATGAACAAAA+TGG | + | chr4_3:64031076-64031095 | Msa0655390:CDS | 30.0% | |
| ! | GTTGTTTGTGTTGTTATCAT+TGG | - | chr4_3:64031146-64031165 | None:intergenic | 30.0% |
| !! | GAATTTTGATGATTGTGGTA+AGG | - | chr4_3:64031214-64031233 | None:intergenic | 30.0% |
| !! | GTTGTGAATTTTGATGATTG+TGG | - | chr4_3:64031219-64031238 | None:intergenic | 30.0% |
| TATAAGTGGAAACATCATCA+AGG | - | chr4_3:64031243-64031262 | None:intergenic | 30.0% | |
| GATGTTTCCACTTATACAAA+TGG | + | chr4_3:64031247-64031266 | Msa0655390:CDS | 30.0% | |
| AGTGAATCCATTTGTATAAG+TGG | - | chr4_3:64031257-64031276 | None:intergenic | 30.0% | |
| ! | CAAAATCTTGGTTTGAACAT+AGG | + | chr4_3:64031304-64031323 | Msa0655390:CDS | 30.0% |
| ! | GATATTGTTGTTCAGATAGT+TGG | - | chr4_3:64031438-64031457 | None:intergenic | 30.0% |
| TTTCTCAGTTGCAAAATGTT+TGG | - | chr4_3:64031926-64031945 | None:intergenic | 30.0% | |
| ! | ATGGAAAGTACAAAATCTTG+AGG | + | chr4_3:64031965-64031984 | Msa0655390:CDS | 30.0% |
| ! | TGGAAAGTACAAAATCTTGA+GGG | + | chr4_3:64031966-64031985 | Msa0655390:CDS | 30.0% |
| !! | ATGTTTATTGCTGTTTACCT+TGG | - | chr4_3:64032010-64032029 | None:intergenic | 30.0% |
| GAATGAACTGAAATTATTGG+TGG | + | chr4_3:64032317-64032336 | Msa0655390:CDS | 30.0% | |
| TAACATCATCATCGATAATC+CGG | - | chr4_3:64032494-64032513 | None:intergenic | 30.0% | |
| TTACAATCAAACTGTTTCAG+AGG | + | chr4_3:64032511-64032530 | Msa0655390:CDS | 30.0% | |
| TAGTTTCTTGTTCAATAGCA+AGG | + | chr4_3:64032629-64032648 | Msa0655390:CDS | 30.0% | |
| CAAAACATGCATGAACAAAA+TGG | + | chr4_3:64031076-64031095 | Msa0655390:CDS | 30.0% | |
| ! | GTTGTTTGTGTTGTTATCAT+TGG | - | chr4_3:64031146-64031165 | None:intergenic | 30.0% |
| !! | GAATTTTGATGATTGTGGTA+AGG | - | chr4_3:64031214-64031233 | None:intergenic | 30.0% |
| !! | GTTGTGAATTTTGATGATTG+TGG | - | chr4_3:64031219-64031238 | None:intergenic | 30.0% |
| TATAAGTGGAAACATCATCA+AGG | - | chr4_3:64031243-64031262 | None:intergenic | 30.0% | |
| GATGTTTCCACTTATACAAA+TGG | + | chr4_3:64031247-64031266 | Msa0655390:CDS | 30.0% | |
| AGTGAATCCATTTGTATAAG+TGG | - | chr4_3:64031257-64031276 | None:intergenic | 30.0% | |
| ! | CAAAATCTTGGTTTGAACAT+AGG | + | chr4_3:64031304-64031323 | Msa0655390:CDS | 30.0% |
| ! | GATATTGTTGTTCAGATAGT+TGG | - | chr4_3:64031438-64031457 | None:intergenic | 30.0% |
| TTTCTCAGTTGCAAAATGTT+TGG | - | chr4_3:64031926-64031945 | None:intergenic | 30.0% | |
| ! | ATGGAAAGTACAAAATCTTG+AGG | + | chr4_3:64031965-64031984 | Msa0655390:CDS | 30.0% |
| ! | TGGAAAGTACAAAATCTTGA+GGG | + | chr4_3:64031966-64031985 | Msa0655390:CDS | 30.0% |
| !! | ATGTTTATTGCTGTTTACCT+TGG | - | chr4_3:64032010-64032029 | None:intergenic | 30.0% |
| GAATGAACTGAAATTATTGG+TGG | + | chr4_3:64032317-64032336 | Msa0655390:CDS | 30.0% | |
| TAACATCATCATCGATAATC+CGG | - | chr4_3:64032494-64032513 | None:intergenic | 30.0% | |
| TTACAATCAAACTGTTTCAG+AGG | + | chr4_3:64032511-64032530 | Msa0655390:CDS | 30.0% | |
| TAGTTTCTTGTTCAATAGCA+AGG | + | chr4_3:64032629-64032648 | Msa0655390:CDS | 30.0% | |
| TGTTCAATGTCTACTGATGA+GGG | - | chr4_3:64031280-64031299 | None:intergenic | 35.0% | |
| TTGTTCAATGTCTACTGATG+AGG | - | chr4_3:64031281-64031300 | None:intergenic | 35.0% | |
| ATGGTTATCCATGTTGTTGT+AGG | - | chr4_3:64031335-64031354 | None:intergenic | 35.0% | |
| CAACAACATGGATAACCATT+TGG | + | chr4_3:64031336-64031355 | Msa0655390:CDS | 35.0% | |
| GATACACTTCTTGTACCAAA+TGG | - | chr4_3:64031354-64031373 | None:intergenic | 35.0% | |
| AATCCATATCCTGAACACTA+GGG | - | chr4_3:64031393-64031412 | None:intergenic | 35.0% | |
| TAATCCATATCCTGAACACT+AGG | - | chr4_3:64031394-64031413 | None:intergenic | 35.0% | |
| ! | TAGGTAAGTTGAGAAGGTTA+AGG | - | chr4_3:64031543-64031562 | None:intergenic | 35.0% |
| GAAGGTTCAAAGGATATAGA+GGG | - | chr4_3:64031717-64031736 | None:intergenic | 35.0% | |
| ! | TCGAGAAATGGTTCTCTTTT+CGG | + | chr4_3:64031805-64031824 | Msa0655390:CDS | 35.0% |
| CAAAGAAGAGAGCAATTGAA+TGG | + | chr4_3:64031946-64031965 | Msa0655390:CDS | 35.0% | |
| !! | TTATTGCTGTTTACCTTGGT+GGG | - | chr4_3:64032006-64032025 | None:intergenic | 35.0% |
| !! | TTTATTGCTGTTTACCTTGG+TGG | - | chr4_3:64032007-64032026 | None:intergenic | 35.0% |
| ATCAATTGGCAACAGAAAAG+TGG | - | chr4_3:64032085-64032104 | None:intergenic | 35.0% | |
| ! | CAATGATTAACGGTCAGTTT+TGG | + | chr4_3:64032222-64032241 | Msa0655390:intron | 35.0% |
| ! | AGCTGTAACATAAAGCCTTT+TGG | + | chr4_3:64032402-64032421 | Msa0655390:CDS | 35.0% |
| AGGTTCTTATACTTCCATCT+GGG | - | chr4_3:64032431-64032450 | None:intergenic | 35.0% | |
| ! | ATGGAAGTATAAGAACCTCA+TGG | + | chr4_3:64032433-64032452 | Msa0655390:CDS | 35.0% |
| TTCTTGTTCAATAGCAAGGT+TGG | + | chr4_3:64032633-64032652 | Msa0655390:intron | 35.0% | |
| TGTTATGGACACACAATATG+CGG | + | chr4_3:64032803-64032822 | Msa0655390:CDS | 35.0% | |
| TGTTCAATGTCTACTGATGA+GGG | - | chr4_3:64031280-64031299 | None:intergenic | 35.0% | |
| TTGTTCAATGTCTACTGATG+AGG | - | chr4_3:64031281-64031300 | None:intergenic | 35.0% | |
| ATGGTTATCCATGTTGTTGT+AGG | - | chr4_3:64031335-64031354 | None:intergenic | 35.0% | |
| CAACAACATGGATAACCATT+TGG | + | chr4_3:64031336-64031355 | Msa0655390:CDS | 35.0% | |
| GATACACTTCTTGTACCAAA+TGG | - | chr4_3:64031354-64031373 | None:intergenic | 35.0% | |
| AATCCATATCCTGAACACTA+GGG | - | chr4_3:64031393-64031412 | None:intergenic | 35.0% | |
| TAATCCATATCCTGAACACT+AGG | - | chr4_3:64031394-64031413 | None:intergenic | 35.0% | |
| ! | TAGGTAAGTTGAGAAGGTTA+AGG | - | chr4_3:64031543-64031562 | None:intergenic | 35.0% |
| GAAGGTTCAAAGGATATAGA+GGG | - | chr4_3:64031717-64031736 | None:intergenic | 35.0% | |
| ! | TCGAGAAATGGTTCTCTTTT+CGG | + | chr4_3:64031805-64031824 | Msa0655390:CDS | 35.0% |
| CAAAGAAGAGAGCAATTGAA+TGG | + | chr4_3:64031946-64031965 | Msa0655390:CDS | 35.0% | |
| !! | TTATTGCTGTTTACCTTGGT+GGG | - | chr4_3:64032006-64032025 | None:intergenic | 35.0% |
| !! | TTTATTGCTGTTTACCTTGG+TGG | - | chr4_3:64032007-64032026 | None:intergenic | 35.0% |
| ATCAATTGGCAACAGAAAAG+TGG | - | chr4_3:64032085-64032104 | None:intergenic | 35.0% | |
| ! | CAATGATTAACGGTCAGTTT+TGG | + | chr4_3:64032222-64032241 | Msa0655390:intron | 35.0% |
| ! | AGCTGTAACATAAAGCCTTT+TGG | + | chr4_3:64032402-64032421 | Msa0655390:CDS | 35.0% |
| AGGTTCTTATACTTCCATCT+GGG | - | chr4_3:64032431-64032450 | None:intergenic | 35.0% | |
| ! | ATGGAAGTATAAGAACCTCA+TGG | + | chr4_3:64032433-64032452 | Msa0655390:CDS | 35.0% |
| TTCTTGTTCAATAGCAAGGT+TGG | + | chr4_3:64032633-64032652 | Msa0655390:intron | 35.0% | |
| TGTTATGGACACACAATATG+CGG | + | chr4_3:64032803-64032822 | Msa0655390:CDS | 35.0% | |
| TTGCTTTGATCCCAACACAA+TGG | + | chr4_3:64031099-64031118 | Msa0655390:CDS | 40.0% | |
| ACACCTTCATCCATTGTGTT+GGG | - | chr4_3:64031112-64031131 | None:intergenic | 40.0% | |
| AACACCTTCATCCATTGTGT+TGG | - | chr4_3:64031113-64031132 | None:intergenic | 40.0% | |
| AAGGCTTGAAATTCTCGTCA+AGG | - | chr4_3:64031177-64031196 | None:intergenic | 40.0% | |
| GAATTTCAAGCCTTCTGTAG+AGG | + | chr4_3:64031183-64031202 | Msa0655390:CDS | 40.0% | |
| TAAGGTAGTTCCTCTACAGA+AGG | - | chr4_3:64031196-64031215 | None:intergenic | 40.0% | |
| AGGGAATACCTACAACAACA+TGG | + | chr4_3:64031324-64031343 | Msa0655390:CDS | 40.0% | |
| AAGTGTATCAGAACTCGAGT+TGG | + | chr4_3:64031365-64031384 | Msa0655390:CDS | 40.0% | |
| AGTGTATCAGAACTCGAGTT+GGG | + | chr4_3:64031366-64031385 | Msa0655390:CDS | 40.0% | |
| !! | CAGATAGTTGGTGATGTTCT+TGG | - | chr4_3:64031426-64031445 | None:intergenic | 40.0% |
| !! | AGGGATTGTAGCTTTGGTTA+TGG | - | chr4_3:64031483-64031502 | None:intergenic | 40.0% |
| TTGAGAAGGTTAAGGACATC+CGG | - | chr4_3:64031535-64031554 | None:intergenic | 40.0% | |
| ! | AGCATCTAGGTAAGTTGAGA+AGG | - | chr4_3:64031549-64031568 | None:intergenic | 40.0% |
| !! | AGCAAAGATGAAGAGCATCT+AGG | - | chr4_3:64031562-64031581 | None:intergenic | 40.0% |
| ! | TTTGTCATGCAAATGGTGGA+TGG | - | chr4_3:64031592-64031611 | None:intergenic | 40.0% |
| AGTTGGGTTTGTCATGCAAA+TGG | - | chr4_3:64031599-64031618 | None:intergenic | 40.0% | |
| ! | AATTGGGTGGATTCTGAGTT+GGG | - | chr4_3:64031615-64031634 | None:intergenic | 40.0% |
| ! | AAATTGGGTGGATTCTGAGT+TGG | - | chr4_3:64031616-64031635 | None:intergenic | 40.0% |
| TTTCTTGGAGACCTTCCAAT+AGG | + | chr4_3:64031652-64031671 | Msa0655390:CDS | 40.0% | |
| TGTCTGATGATCCTATTGGA+AGG | - | chr4_3:64031666-64031685 | None:intergenic | 40.0% | |
| GTGTTGTCTGATGATCCTAT+TGG | - | chr4_3:64031670-64031689 | None:intergenic | 40.0% | |
| GGAAGGTTCAAAGGATATAG+AGG | - | chr4_3:64031718-64031737 | None:intergenic | 40.0% | |
| AAGAGAACCATTTCTCGAGT+TGG | - | chr4_3:64031803-64031822 | None:intergenic | 40.0% | |
| ! | AGAAATGGTTCTCTTTTCGG+TGG | + | chr4_3:64031808-64031827 | Msa0655390:CDS | 40.0% |
| TTGGTGGAGAAGAAAAGACA+TGG | + | chr4_3:64032333-64032352 | Msa0655390:CDS | 40.0% | |
| TGGTGGAGAAGAAAAGACAT+GGG | + | chr4_3:64032334-64032353 | Msa0655390:CDS | 40.0% | |
| GAGGTTCTTATACTTCCATC+TGG | - | chr4_3:64032432-64032451 | None:intergenic | 40.0% | |
| CAAACTGTTTCAGAGGAAGA+AGG | + | chr4_3:64032518-64032537 | Msa0655390:CDS | 40.0% | |
| CTGAAGTTCATCCAAAACCT+TGG | - | chr4_3:64032565-64032584 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGATGAACTTCAGT+TGG | + | chr4_3:64032566-64032585 | Msa0655390:CDS | 40.0% |
| ! | ATAAGGTGTTTCACTGATGC+AGG | + | chr4_3:64032728-64032747 | Msa0655390:intron | 40.0% |
| TCACTGATGCAGGTAAATGA+AGG | + | chr4_3:64032738-64032757 | Msa0655390:intron | 40.0% | |
| CATAACATCAATCACCCTGT+TGG | - | chr4_3:64032790-64032809 | None:intergenic | 40.0% | |
| CAACAGGGTGATTGATGTTA+TGG | + | chr4_3:64032788-64032807 | Msa0655390:CDS | 40.0% | |
| TTGCTTTGATCCCAACACAA+TGG | + | chr4_3:64031099-64031118 | Msa0655390:CDS | 40.0% | |
| ACACCTTCATCCATTGTGTT+GGG | - | chr4_3:64031112-64031131 | None:intergenic | 40.0% | |
| AACACCTTCATCCATTGTGT+TGG | - | chr4_3:64031113-64031132 | None:intergenic | 40.0% | |
| AAGGCTTGAAATTCTCGTCA+AGG | - | chr4_3:64031177-64031196 | None:intergenic | 40.0% | |
| GAATTTCAAGCCTTCTGTAG+AGG | + | chr4_3:64031183-64031202 | Msa0655390:CDS | 40.0% | |
| TAAGGTAGTTCCTCTACAGA+AGG | - | chr4_3:64031196-64031215 | None:intergenic | 40.0% | |
| AGGGAATACCTACAACAACA+TGG | + | chr4_3:64031324-64031343 | Msa0655390:CDS | 40.0% | |
| AAGTGTATCAGAACTCGAGT+TGG | + | chr4_3:64031365-64031384 | Msa0655390:CDS | 40.0% | |
| AGTGTATCAGAACTCGAGTT+GGG | + | chr4_3:64031366-64031385 | Msa0655390:CDS | 40.0% | |
| !! | CAGATAGTTGGTGATGTTCT+TGG | - | chr4_3:64031426-64031445 | None:intergenic | 40.0% |
| !! | AGGGATTGTAGCTTTGGTTA+TGG | - | chr4_3:64031483-64031502 | None:intergenic | 40.0% |
| TTGAGAAGGTTAAGGACATC+CGG | - | chr4_3:64031535-64031554 | None:intergenic | 40.0% | |
| ! | AGCATCTAGGTAAGTTGAGA+AGG | - | chr4_3:64031549-64031568 | None:intergenic | 40.0% |
| !! | AGCAAAGATGAAGAGCATCT+AGG | - | chr4_3:64031562-64031581 | None:intergenic | 40.0% |
| ! | TTTGTCATGCAAATGGTGGA+TGG | - | chr4_3:64031592-64031611 | None:intergenic | 40.0% |
| AGTTGGGTTTGTCATGCAAA+TGG | - | chr4_3:64031599-64031618 | None:intergenic | 40.0% | |
| ! | AATTGGGTGGATTCTGAGTT+GGG | - | chr4_3:64031615-64031634 | None:intergenic | 40.0% |
| ! | AAATTGGGTGGATTCTGAGT+TGG | - | chr4_3:64031616-64031635 | None:intergenic | 40.0% |
| TTTCTTGGAGACCTTCCAAT+AGG | + | chr4_3:64031652-64031671 | Msa0655390:CDS | 40.0% | |
| TGTCTGATGATCCTATTGGA+AGG | - | chr4_3:64031666-64031685 | None:intergenic | 40.0% | |
| GTGTTGTCTGATGATCCTAT+TGG | - | chr4_3:64031670-64031689 | None:intergenic | 40.0% | |
| GGAAGGTTCAAAGGATATAG+AGG | - | chr4_3:64031718-64031737 | None:intergenic | 40.0% | |
| AAGAGAACCATTTCTCGAGT+TGG | - | chr4_3:64031803-64031822 | None:intergenic | 40.0% | |
| ! | AGAAATGGTTCTCTTTTCGG+TGG | + | chr4_3:64031808-64031827 | Msa0655390:CDS | 40.0% |
| TTGGTGGAGAAGAAAAGACA+TGG | + | chr4_3:64032333-64032352 | Msa0655390:CDS | 40.0% | |
| TGGTGGAGAAGAAAAGACAT+GGG | + | chr4_3:64032334-64032353 | Msa0655390:CDS | 40.0% | |
| GAGGTTCTTATACTTCCATC+TGG | - | chr4_3:64032432-64032451 | None:intergenic | 40.0% | |
| CAAACTGTTTCAGAGGAAGA+AGG | + | chr4_3:64032518-64032537 | Msa0655390:CDS | 40.0% | |
| CTGAAGTTCATCCAAAACCT+TGG | - | chr4_3:64032565-64032584 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGATGAACTTCAGT+TGG | + | chr4_3:64032566-64032585 | Msa0655390:CDS | 40.0% |
| ! | ATAAGGTGTTTCACTGATGC+AGG | + | chr4_3:64032728-64032747 | Msa0655390:intron | 40.0% |
| TCACTGATGCAGGTAAATGA+AGG | + | chr4_3:64032738-64032757 | Msa0655390:intron | 40.0% | |
| CATAACATCAATCACCCTGT+TGG | - | chr4_3:64032790-64032809 | None:intergenic | 40.0% | |
| CAACAGGGTGATTGATGTTA+TGG | + | chr4_3:64032788-64032807 | Msa0655390:CDS | 40.0% | |
| GATCCCAACACAATGGATGA+AGG | + | chr4_3:64031106-64031125 | Msa0655390:CDS | 45.0% | |
| AGGGTAATGAGGGTCTAGAA+TGG | - | chr4_3:64031509-64031528 | None:intergenic | 45.0% | |
| TGGGTTTGTCATGCAAATGG+TGG | - | chr4_3:64031596-64031615 | None:intergenic | 45.0% | |
| GGATCATCAGACAACACAAG+CGG | + | chr4_3:64031673-64031692 | Msa0655390:CDS | 45.0% | |
| AGACAACACAAGCGGATCAT+CGG | + | chr4_3:64031681-64031700 | Msa0655390:CDS | 45.0% | |
| TGAAACAATTCCCTGAGAGC+TGG | - | chr4_3:64031751-64031770 | None:intergenic | 45.0% | |
| TTGTTTCAATCTCTGCCTCG+AGG | + | chr4_3:64031763-64031782 | Msa0655390:CDS | 45.0% | |
| ATGCCAACCAACTCGAGAAA+TGG | + | chr4_3:64031793-64031812 | Msa0655390:CDS | 45.0% | |
| !! | GAACCATTTCTCGAGTTGGT+TGG | - | chr4_3:64031799-64031818 | None:intergenic | 45.0% |
| ! | AATGGTTCTCTTTTCGGTGG+AGG | + | chr4_3:64031811-64031830 | Msa0655390:CDS | 45.0% |
| !! | TGGGAGTGCTGGAATTCAAT+AGG | + | chr4_3:64031860-64031879 | Msa0655390:CDS | 45.0% |
| !! | GGGAGTGCTGGAATTCAATA+GGG | + | chr4_3:64031861-64031880 | Msa0655390:CDS | 45.0% |
| AATAGGGTCACTGCTTCTGT+TGG | + | chr4_3:64031877-64031896 | Msa0655390:CDS | 45.0% | |
| TGTTTACCTTGGTGGGACTT+GGG | - | chr4_3:64031999-64032018 | None:intergenic | 45.0% | |
| ATTGGCAACAGAAAAGTGGC+TGG | - | chr4_3:64032081-64032100 | None:intergenic | 45.0% | |
| ! | ACTGATAGAGCATCAGTGGT+TGG | + | chr4_3:64032255-64032274 | Msa0655390:CDS | 45.0% |
| TGGAGAAGAAAAGACATGGG+AGG | + | chr4_3:64032337-64032356 | Msa0655390:CDS | 45.0% | |
| GGAGAAGAAAAGACATGGGA+GGG | + | chr4_3:64032338-64032357 | Msa0655390:CDS | 45.0% | |
| GAGGAAATCCAAAGACAGTG+AGG | + | chr4_3:64032461-64032480 | Msa0655390:CDS | 45.0% | |
| GACATCAACCTCACTGTCTT+TGG | - | chr4_3:64032472-64032491 | None:intergenic | 45.0% | |
| !! | AAGACAGTGAGGTTGATGTC+CGG | + | chr4_3:64032472-64032491 | Msa0655390:CDS | 45.0% |
| !! | TTGCTTGCTGTTTGTGTCCA+AGG | + | chr4_3:64032545-64032564 | Msa0655390:CDS | 45.0% |
| ! | GCTGTTTGTGTCCAAGGTTT+TGG | + | chr4_3:64032551-64032570 | Msa0655390:CDS | 45.0% |
| TTGGAACTTCACCATGTTGC+AGG | + | chr4_3:64032585-64032604 | Msa0655390:CDS | 45.0% | |
| ATGCAAGTGCTATAGCCAAC+AGG | + | chr4_3:64032772-64032791 | Msa0655390:CDS | 45.0% | |
| TGCAAGTGCTATAGCCAACA+GGG | + | chr4_3:64032773-64032792 | Msa0655390:CDS | 45.0% | |
| CAGGTCTTCCACATACAAGT+AGG | + | chr4_3:64032826-64032845 | Msa0655390:CDS | 45.0% | |
| GATCCCAACACAATGGATGA+AGG | + | chr4_3:64031106-64031125 | Msa0655390:CDS | 45.0% | |
| AGGGTAATGAGGGTCTAGAA+TGG | - | chr4_3:64031509-64031528 | None:intergenic | 45.0% | |
| TGGGTTTGTCATGCAAATGG+TGG | - | chr4_3:64031596-64031615 | None:intergenic | 45.0% | |
| GGATCATCAGACAACACAAG+CGG | + | chr4_3:64031673-64031692 | Msa0655390:CDS | 45.0% | |
| AGACAACACAAGCGGATCAT+CGG | + | chr4_3:64031681-64031700 | Msa0655390:CDS | 45.0% | |
| TGAAACAATTCCCTGAGAGC+TGG | - | chr4_3:64031751-64031770 | None:intergenic | 45.0% | |
| TTGTTTCAATCTCTGCCTCG+AGG | + | chr4_3:64031763-64031782 | Msa0655390:CDS | 45.0% | |
| ATGCCAACCAACTCGAGAAA+TGG | + | chr4_3:64031793-64031812 | Msa0655390:CDS | 45.0% | |
| !! | GAACCATTTCTCGAGTTGGT+TGG | - | chr4_3:64031799-64031818 | None:intergenic | 45.0% |
| ! | AATGGTTCTCTTTTCGGTGG+AGG | + | chr4_3:64031811-64031830 | Msa0655390:CDS | 45.0% |
| !! | TGGGAGTGCTGGAATTCAAT+AGG | + | chr4_3:64031860-64031879 | Msa0655390:CDS | 45.0% |
| !! | GGGAGTGCTGGAATTCAATA+GGG | + | chr4_3:64031861-64031880 | Msa0655390:CDS | 45.0% |
| AATAGGGTCACTGCTTCTGT+TGG | + | chr4_3:64031877-64031896 | Msa0655390:CDS | 45.0% | |
| TGTTTACCTTGGTGGGACTT+GGG | - | chr4_3:64031999-64032018 | None:intergenic | 45.0% | |
| ATTGGCAACAGAAAAGTGGC+TGG | - | chr4_3:64032081-64032100 | None:intergenic | 45.0% | |
| ! | ACTGATAGAGCATCAGTGGT+TGG | + | chr4_3:64032255-64032274 | Msa0655390:CDS | 45.0% |
| TGGAGAAGAAAAGACATGGG+AGG | + | chr4_3:64032337-64032356 | Msa0655390:CDS | 45.0% | |
| GGAGAAGAAAAGACATGGGA+GGG | + | chr4_3:64032338-64032357 | Msa0655390:CDS | 45.0% | |
| GAGGAAATCCAAAGACAGTG+AGG | + | chr4_3:64032461-64032480 | Msa0655390:CDS | 45.0% | |
| GACATCAACCTCACTGTCTT+TGG | - | chr4_3:64032472-64032491 | None:intergenic | 45.0% | |
| !! | AAGACAGTGAGGTTGATGTC+CGG | + | chr4_3:64032472-64032491 | Msa0655390:CDS | 45.0% |
| !! | TTGCTTGCTGTTTGTGTCCA+AGG | + | chr4_3:64032545-64032564 | Msa0655390:CDS | 45.0% |
| ! | GCTGTTTGTGTCCAAGGTTT+TGG | + | chr4_3:64032551-64032570 | Msa0655390:CDS | 45.0% |
| TTGGAACTTCACCATGTTGC+AGG | + | chr4_3:64032585-64032604 | Msa0655390:CDS | 45.0% | |
| ATGCAAGTGCTATAGCCAAC+AGG | + | chr4_3:64032772-64032791 | Msa0655390:CDS | 45.0% | |
| TGCAAGTGCTATAGCCAACA+GGG | + | chr4_3:64032773-64032792 | Msa0655390:CDS | 45.0% | |
| CAGGTCTTCCACATACAAGT+AGG | + | chr4_3:64032826-64032845 | Msa0655390:CDS | 45.0% | |
| GGACCCTAGTGTTCAGGATA+TGG | + | chr4_3:64031387-64031406 | Msa0655390:CDS | 50.0% | |
| TGGTCGAGGGATTGTAGCTT+TGG | - | chr4_3:64031489-64031508 | None:intergenic | 50.0% | |
| ! | TGAGGGTCTAGAATGGTCGA+GGG | - | chr4_3:64031502-64031521 | None:intergenic | 50.0% |
| ! | ATGAGGGTCTAGAATGGTCG+AGG | - | chr4_3:64031503-64031522 | None:intergenic | 50.0% |
| AGACCCTCATTACCCTTCAC+CGG | + | chr4_3:64031513-64031532 | Msa0655390:CDS | 50.0% | |
| CATCCGGTGAAGGGTAATGA+GGG | - | chr4_3:64031519-64031538 | None:intergenic | 50.0% | |
| ACATCCGGTGAAGGGTAATG+AGG | - | chr4_3:64031520-64031539 | None:intergenic | 50.0% | |
| GGTTAAGGACATCCGGTGAA+GGG | - | chr4_3:64031528-64031547 | None:intergenic | 50.0% | |
| AGGTTAAGGACATCCGGTGA+AGG | - | chr4_3:64031529-64031548 | None:intergenic | 50.0% | |
| AACAATTCCCTGAGAGCTGG+AGG | - | chr4_3:64031748-64031767 | None:intergenic | 50.0% | |
| TTTCGGTGGAGGTGATGAGA+TGG | + | chr4_3:64031822-64031841 | Msa0655390:CDS | 50.0% | |
| GTGATGAGATGGAGGGAGAT+GGG | + | chr4_3:64031833-64031852 | Msa0655390:CDS | 50.0% | |
| TGATGAGATGGAGGGAGATG+GGG | + | chr4_3:64031834-64031853 | Msa0655390:CDS | 50.0% | |
| ATGGAGGGAGATGGGGATAT+GGG | + | chr4_3:64031841-64031860 | Msa0655390:CDS | 50.0% | |
| GTCACTGCTTCTGTTGGCAA+AGG | + | chr4_3:64031883-64031902 | Msa0655390:CDS | 50.0% | |
| GCTTCTGTTGGCAAAGGAAG+AGG | + | chr4_3:64031889-64031908 | Msa0655390:CDS | 50.0% | |
| TCTGTTGGCAAAGGAAGAGG+AGG | + | chr4_3:64031892-64031911 | Msa0655390:CDS | 50.0% | |
| CTGTTTACCTTGGTGGGACT+TGG | - | chr4_3:64032000-64032019 | None:intergenic | 50.0% | |
| ! | GCAGACTGATAGAGCATCAG+TGG | + | chr4_3:64032251-64032270 | Msa0655390:intron | 50.0% |
| !! | AAGCCTTTTGGTGACCCAGA+TGG | + | chr4_3:64032414-64032433 | Msa0655390:CDS | 50.0% |
| CTTCCATCTGGGTCACCAAA+AGG | - | chr4_3:64032420-64032439 | None:intergenic | 50.0% | |
| TAAGAACCTCATGGCTGCAG+AGG | + | chr4_3:64032442-64032461 | Msa0655390:CDS | 50.0% | |
| GAACTTCACCATGTTGCAGG+TGG | + | chr4_3:64032588-64032607 | Msa0655390:CDS | 50.0% | |
| CAACATGTCCACCTGCAACA+TGG | - | chr4_3:64032599-64032618 | None:intergenic | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | + | chr4_3:64032597-64032616 | Msa0655390:CDS | 50.0% | |
| ATGGACACACAATATGCGGC+AGG | + | chr4_3:64032807-64032826 | Msa0655390:CDS | 50.0% | |
| GGACCCTAGTGTTCAGGATA+TGG | + | chr4_3:64031387-64031406 | Msa0655390:CDS | 50.0% | |
| TGGTCGAGGGATTGTAGCTT+TGG | - | chr4_3:64031489-64031508 | None:intergenic | 50.0% | |
| ! | TGAGGGTCTAGAATGGTCGA+GGG | - | chr4_3:64031502-64031521 | None:intergenic | 50.0% |
| ! | ATGAGGGTCTAGAATGGTCG+AGG | - | chr4_3:64031503-64031522 | None:intergenic | 50.0% |
| AGACCCTCATTACCCTTCAC+CGG | + | chr4_3:64031513-64031532 | Msa0655390:CDS | 50.0% | |
| CATCCGGTGAAGGGTAATGA+GGG | - | chr4_3:64031519-64031538 | None:intergenic | 50.0% | |
| ACATCCGGTGAAGGGTAATG+AGG | - | chr4_3:64031520-64031539 | None:intergenic | 50.0% | |
| GGTTAAGGACATCCGGTGAA+GGG | - | chr4_3:64031528-64031547 | None:intergenic | 50.0% | |
| AGGTTAAGGACATCCGGTGA+AGG | - | chr4_3:64031529-64031548 | None:intergenic | 50.0% | |
| AACAATTCCCTGAGAGCTGG+AGG | - | chr4_3:64031748-64031767 | None:intergenic | 50.0% | |
| TTTCGGTGGAGGTGATGAGA+TGG | + | chr4_3:64031822-64031841 | Msa0655390:CDS | 50.0% | |
| GTGATGAGATGGAGGGAGAT+GGG | + | chr4_3:64031833-64031852 | Msa0655390:CDS | 50.0% | |
| TGATGAGATGGAGGGAGATG+GGG | + | chr4_3:64031834-64031853 | Msa0655390:CDS | 50.0% | |
| ATGGAGGGAGATGGGGATAT+GGG | + | chr4_3:64031841-64031860 | Msa0655390:CDS | 50.0% | |
| GTCACTGCTTCTGTTGGCAA+AGG | + | chr4_3:64031883-64031902 | Msa0655390:CDS | 50.0% | |
| GCTTCTGTTGGCAAAGGAAG+AGG | + | chr4_3:64031889-64031908 | Msa0655390:CDS | 50.0% | |
| TCTGTTGGCAAAGGAAGAGG+AGG | + | chr4_3:64031892-64031911 | Msa0655390:CDS | 50.0% | |
| CTGTTTACCTTGGTGGGACT+TGG | - | chr4_3:64032000-64032019 | None:intergenic | 50.0% | |
| ! | GCAGACTGATAGAGCATCAG+TGG | + | chr4_3:64032251-64032270 | Msa0655390:intron | 50.0% |
| !! | AAGCCTTTTGGTGACCCAGA+TGG | + | chr4_3:64032414-64032433 | Msa0655390:CDS | 50.0% |
| CTTCCATCTGGGTCACCAAA+AGG | - | chr4_3:64032420-64032439 | None:intergenic | 50.0% | |
| TAAGAACCTCATGGCTGCAG+AGG | + | chr4_3:64032442-64032461 | Msa0655390:CDS | 50.0% | |
| GAACTTCACCATGTTGCAGG+TGG | + | chr4_3:64032588-64032607 | Msa0655390:CDS | 50.0% | |
| CAACATGTCCACCTGCAACA+TGG | - | chr4_3:64032599-64032618 | None:intergenic | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | + | chr4_3:64032597-64032616 | Msa0655390:CDS | 50.0% | |
| ATGGACACACAATATGCGGC+AGG | + | chr4_3:64032807-64032826 | Msa0655390:CDS | 50.0% | |
| GAGTTGGGACCCTAGTGTTC+AGG | + | chr4_3:64031381-64031400 | Msa0655390:CDS | 55.0% | |
| GGCTGTGGAGGAAGGTTCAA+AGG | - | chr4_3:64031727-64031746 | None:intergenic | 55.0% | |
| GTTGGCATGCTATAGCCTCG+AGG | - | chr4_3:64031781-64031800 | None:intergenic | 55.0% | |
| GGTGGAGGTGATGAGATGGA+GGG | + | chr4_3:64031826-64031845 | Msa0655390:CDS | 55.0% | |
| GGTGATGAGATGGAGGGAGA+TGG | + | chr4_3:64031832-64031851 | Msa0655390:CDS | 55.0% | |
| GATGGAGGGAGATGGGGATA+TGG | + | chr4_3:64031840-64031859 | Msa0655390:CDS | 55.0% | |
| ! | AGATGGGGATATGGGAGTGC+TGG | + | chr4_3:64031849-64031868 | Msa0655390:CDS | 55.0% |
| TCTCATCCCAAGTCCCACCA+AGG | + | chr4_3:64031990-64032009 | Msa0655390:CDS | 55.0% | |
| GGATTTCCTCTGCAGCCATG+AGG | - | chr4_3:64032451-64032470 | None:intergenic | 55.0% | |
| GAGTTGGGACCCTAGTGTTC+AGG | + | chr4_3:64031381-64031400 | Msa0655390:CDS | 55.0% | |
| GGCTGTGGAGGAAGGTTCAA+AGG | - | chr4_3:64031727-64031746 | None:intergenic | 55.0% | |
| GTTGGCATGCTATAGCCTCG+AGG | - | chr4_3:64031781-64031800 | None:intergenic | 55.0% | |
| GGTGGAGGTGATGAGATGGA+GGG | + | chr4_3:64031826-64031845 | Msa0655390:CDS | 55.0% | |
| GGTGATGAGATGGAGGGAGA+TGG | + | chr4_3:64031832-64031851 | Msa0655390:CDS | 55.0% | |
| GATGGAGGGAGATGGGGATA+TGG | + | chr4_3:64031840-64031859 | Msa0655390:CDS | 55.0% | |
| ! | AGATGGGGATATGGGAGTGC+TGG | + | chr4_3:64031849-64031868 | Msa0655390:CDS | 55.0% |
| TCTCATCCCAAGTCCCACCA+AGG | + | chr4_3:64031990-64032009 | Msa0655390:CDS | 55.0% | |
| GGATTTCCTCTGCAGCCATG+AGG | - | chr4_3:64032451-64032470 | None:intergenic | 55.0% | |
| TCCACAGCCTCCAGCTCTCA+GGG | + | chr4_3:64031738-64031757 | Msa0655390:CDS | 60.0% | |
| CGGTGGAGGTGATGAGATGG+AGG | + | chr4_3:64031825-64031844 | Msa0655390:CDS | 60.0% | |
| TCCACAGCCTCCAGCTCTCA+GGG | + | chr4_3:64031738-64031757 | Msa0655390:CDS | 60.0% | |
| CGGTGGAGGTGATGAGATGG+AGG | + | chr4_3:64031825-64031844 | Msa0655390:CDS | 60.0% | |
| GAGCTGGAGGCTGTGGAGGA+AGG | - | chr4_3:64031735-64031754 | None:intergenic | 65.0% | |
| CTGAGAGCTGGAGGCTGTGG+AGG | - | chr4_3:64031739-64031758 | None:intergenic | 65.0% | |
| CTCCACAGCCTCCAGCTCTC+AGG | + | chr4_3:64031737-64031756 | Msa0655390:CDS | 65.0% | |
| TCCCTGAGAGCTGGAGGCTG+TGG | - | chr4_3:64031742-64031761 | None:intergenic | 65.0% | |
| GAGCTGGAGGCTGTGGAGGA+AGG | - | chr4_3:64031735-64031754 | None:intergenic | 65.0% | |
| CTGAGAGCTGGAGGCTGTGG+AGG | - | chr4_3:64031739-64031758 | None:intergenic | 65.0% | |
| CTCCACAGCCTCCAGCTCTC+AGG | + | chr4_3:64031737-64031756 | Msa0655390:CDS | 65.0% | |
| TCCCTGAGAGCTGGAGGCTG+TGG | - | chr4_3:64031742-64031761 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 64031052 | 64032854 | 64031052 | ID=Msa0655390;Name=Msa0655390 |
| chr4_3 | mRNA | 64031052 | 64032854 | 64031052 | ID=Msa0655390-mRNA-1;Parent=Msa0655390;Name=Msa0655390-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0|1|1|1|3|0|486 |
| chr4_3 | exon | 64031052 | 64032011 | 64031052 | ID=Msa0655390-mRNA-1:exon:18019;Parent=Msa0655390-mRNA-1 |
| chr4_3 | exon | 64032255 | 64032650 | 64032255 | ID=Msa0655390-mRNA-1:exon:18020;Parent=Msa0655390-mRNA-1 |
| chr4_3 | exon | 64032750 | 64032854 | 64032750 | ID=Msa0655390-mRNA-1:exon:18021;Parent=Msa0655390-mRNA-1 |
| chr4_3 | CDS | 64031052 | 64032011 | 64031052 | ID=Msa0655390-mRNA-1:cds;Parent=Msa0655390-mRNA-1 |
| chr4_3 | CDS | 64032255 | 64032650 | 64032255 | ID=Msa0655390-mRNA-1:cds;Parent=Msa0655390-mRNA-1 |
| chr4_3 | CDS | 64032750 | 64032854 | 64032750 | ID=Msa0655390-mRNA-1:cds;Parent=Msa0655390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
