Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655720 | XP_039685158.1 | 93.686 | 491 | 25 | 5 | 1 | 490 | 1 | 486 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655720 | sp|Q9M647|IAR1_ARATH | 64.115 | 418 | 127 | 9 | 76 | 490 | 72 | 469 | 5.85e-164 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0562370 | Msa0655720 | 0.828680 | 7.858509e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655720 | MtrunA17_Chr8g0375561 | 93.686 | 491 | 25 | 5 | 1 | 490 | 1 | 486 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655720 | AT1G68100.1 | 64.115 | 418 | 127 | 9 | 76 | 490 | 72 | 469 | 5.94e-165 | 474 |
| Msa0655720 | AT1G68100.2 | 63.488 | 367 | 111 | 9 | 76 | 439 | 72 | 418 | 6.85e-137 | 402 |
Find 139 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATACAGGTTGGTGATTT+TGG | 0.122048 | 4_3:-64579348 | Msa0655720:intron |
| GGAAGTGCATTCATTCTTTA+TGG | 0.128139 | 4_3:-64580881 | Msa0655720:CDS |
| GTTGATTCATTGGCTTTATT+TGG | 0.140275 | 4_3:-64583589 | Msa0655720:CDS |
| TACACAGTTTACTGTGTTAA+TGG | 0.164866 | 4_3:+64578265 | None:intergenic |
| TGAATAAAATGTTCTTTCTT+AGG | 0.196134 | 4_3:-64578480 | Msa0655720:three_prime_UTR |
| TTGATTCATTGGCTTTATTT+GGG | 0.206144 | 4_3:-64583588 | Msa0655720:CDS |
| CGCCGTTATCGTATTGTTCT+TGG | 0.227051 | 4_3:-64584638 | Msa0655720:five_prime_UTR |
| ATATGTGACATTTAGGTCTT+TGG | 0.247023 | 4_3:-64583823 | Msa0655720:intron |
| CTTACACTTAGTGTAATAAT+TGG | 0.274742 | 4_3:+64578431 | None:intergenic |
| TCTGCACTTGTGGCACTTGC+AGG | 0.290617 | 4_3:-64579270 | Msa0655720:CDS |
| GAAAAGGACAAAGACAAATA+AGG | 0.319250 | 4_3:+64578085 | None:intergenic |
| CATGACCATGATGATAATTC+TGG | 0.325466 | 4_3:-64582325 | Msa0655720:CDS |
| TACTCCTATGTTAGAAGAAA+TGG | 0.328980 | 4_3:-64584686 | Msa0655720:five_prime_UTR |
| GTGAACGCAGAAAAGCTTAT+AGG | 0.338557 | 4_3:-64578358 | Msa0655720:three_prime_UTR |
| AAAGGCTGTTGTTGATTCAT+TGG | 0.343628 | 4_3:-64583599 | Msa0655720:CDS |
| CACCAACTACCGCATGCTTT+TGG | 0.343649 | 4_3:-64583298 | Msa0655720:intron |
| TTTCAGGCAGGAGCTATGTT+GGG | 0.345216 | 4_3:-64583334 | Msa0655720:intron |
| GAATCAACAACAGCCTTTGA+TGG | 0.351301 | 4_3:+64583604 | None:intergenic |
| GTTTACTGTGTTAATGGTTA+AGG | 0.358508 | 4_3:+64578271 | None:intergenic |
| AAATTACAGGCAGGATAATC+AGG | 0.370708 | 4_3:+64583750 | None:intergenic |
| AAATCACCGATTGTGTTTGA+TGG | 0.387373 | 4_3:-64578124 | Msa0655720:three_prime_UTR |
| TTTATATACATCGCCATTGC+AGG | 0.389892 | 4_3:-64578615 | Msa0655720:CDS |
| TTCACTGATGGAATTGCATT+AGG | 0.390135 | 4_3:-64580902 | Msa0655720:CDS |
| AATTGTACTCTTTCTTCTTG+TGG | 0.396907 | 4_3:-64581784 | Msa0655720:CDS |
| TTTGGTATAGGCTCTGCTCT+GGG | 0.400886 | 4_3:-64578764 | Msa0655720:intron |
| TCCACTGAACTATCGGGTTT+AGG | 0.402223 | 4_3:-64584247 | Msa0655720:intron |
| TGGGGTTGACCGATAAGAAA+TGG | 0.403068 | 4_3:-64584762 | Msa0655720:five_prime_UTR |
| TCCTCTTCCGCTAATTCCTC+TGG | 0.405894 | 4_3:+64584328 | None:intergenic |
| GAGCATTCCTCACCTCAATC+AGG | 0.406830 | 4_3:+64578719 | None:intergenic |
| TACTGCCTCCACTGAACTAT+CGG | 0.407152 | 4_3:-64584254 | Msa0655720:CDS |
| ATCATTCTGACTACTACCTT+TGG | 0.410847 | 4_3:+64581122 | None:intergenic |
| TGACTGCTATACAGCTCAAA+AGG | 0.416259 | 4_3:+64578184 | None:intergenic |
| TGACAAATGCAAACGGTTTG+TGG | 0.422243 | 4_3:+64578230 | None:intergenic |
| TTTATGGATCTGTTGGTGGC+TGG | 0.428280 | 4_3:-64580865 | Msa0655720:CDS |
| GAGGAAGATATGAAACTCTA+TGG | 0.429877 | 4_3:-64584310 | Msa0655720:CDS |
| AAGTTGAAGAACAAAGCTTT+TGG | 0.434106 | 4_3:+64579297 | None:intergenic |
| TTTCCTCTTTCTTATGCACT+TGG | 0.435803 | 4_3:-64578155 | Msa0655720:three_prime_UTR |
| TTCATTCTTTATGGATCTGT+TGG | 0.436706 | 4_3:-64580872 | Msa0655720:CDS |
| TGCTATTGTGGTTATGGTGG+TGG | 0.438617 | 4_3:+64581700 | None:intergenic |
| TCTACAGGAATGTCTGTCCT+AGG | 0.440185 | 4_3:-64582271 | Msa0655720:intron |
| CCAAACACAAGACTGCTTGC+TGG | 0.440776 | 4_3:+64581039 | None:intergenic |
| CCAGCAAGCAGTCTTGTGTT+TGG | 0.441867 | 4_3:-64581039 | Msa0655720:CDS |
| TGAACGCAGAAAAGCTTATA+GGG | 0.447907 | 4_3:-64578357 | Msa0655720:three_prime_UTR |
| ATTCTTTATGGATCTGTTGG+TGG | 0.455219 | 4_3:-64580869 | Msa0655720:CDS |
| GTCTGCTACATCACCATTGA+AGG | 0.456281 | 4_3:-64584610 | Msa0655720:five_prime_UTR |
| TCTTTAGCTGATCTTTCTAC+AGG | 0.456421 | 4_3:-64582286 | Msa0655720:CDS |
| CTGTTCATTTCTAGTGAGCA+TGG | 0.462325 | 4_3:-64583786 | Msa0655720:CDS |
| TTCAGGCAGGAGCTATGTTG+GGG | 0.468392 | 4_3:-64583333 | Msa0655720:intron |
| GGTCTTTGGTTGAATGCGTT+GGG | 0.474628 | 4_3:-64583809 | Msa0655720:CDS |
| TCAAATAATCTCACTGACAA+TGG | 0.476796 | 4_3:-64578538 | Msa0655720:CDS |
| AGGTCTTTGGTTGAATGCGT+TGG | 0.479620 | 4_3:-64583810 | Msa0655720:CDS |
| CAAATAATCTCACTGACAAT+GGG | 0.483818 | 4_3:-64578537 | Msa0655720:CDS |
| ACTGCCTCCACTGAACTATC+GGG | 0.484575 | 4_3:-64584253 | Msa0655720:CDS |
| ATCTAAATCCTCGCTTAGAA+AGG | 0.488010 | 4_3:-64581535 | Msa0655720:intron |
| TGGTATAGGCTCTGCTCTGG+GGG | 0.489474 | 4_3:-64578762 | Msa0655720:intron |
| TGCATGGTCACCATGAGAAT+GGG | 0.491097 | 4_3:+64582351 | None:intergenic |
| AGCGAGGATTTAGATTGAGC+TGG | 0.491576 | 4_3:+64581543 | None:intergenic |
| AGACTGCTTGCTGGTCTAGC+TGG | 0.494277 | 4_3:+64581048 | None:intergenic |
| TAGAATGAGAGTGACCTTGA+TGG | 0.495202 | 4_3:+64584449 | None:intergenic |
| GGAAGGTGAACTGAGAGAAA+AGG | 0.495255 | 4_3:-64578336 | Msa0655720:three_prime_UTR |
| TTGCAGCATAATTTCACTGA+TGG | 0.495442 | 4_3:-64580914 | Msa0655720:intron |
| TCCAGAGGAATTAGCGGAAG+AGG | 0.497836 | 4_3:-64584329 | Msa0655720:CDS |
| GAAATGGATGTGATAACCTT+CGG | 0.499822 | 4_3:-64584670 | Msa0655720:five_prime_UTR |
| TACCAAAAGCATGCGGTAGT+TGG | 0.508827 | 4_3:+64583296 | None:intergenic |
| CTGCATGGTCACCATGAGAA+TGG | 0.509145 | 4_3:+64582350 | None:intergenic |
| GGCACTTGCAGGCACTGCAT+TGG | 0.512803 | 4_3:-64579259 | Msa0655720:intron |
| TCAATCAGGGATGACTGTCC+AGG | 0.514548 | 4_3:+64578733 | None:intergenic |
| ACATCCATTTCTTCTAACAT+AGG | 0.514847 | 4_3:+64584682 | None:intergenic |
| TAGATCAATACAGAATGGTC+AGG | 0.515623 | 4_3:-64578312 | Msa0655720:three_prime_UTR |
| GATGGTCGTGATGGGGTAAA+CGG | 0.515650 | 4_3:+64584284 | None:intergenic |
| TAATTCCTCTGGAAGTAACT+TGG | 0.516457 | 4_3:+64584339 | None:intergenic |
| ATTCACCTGTTTCAGTTCAA+GGG | 0.517071 | 4_3:-64583630 | Msa0655720:intron |
| CAGTGATGATGATGGATGTT+GGG | 0.518606 | 4_3:+64584424 | None:intergenic |
| CTCTGCAAGCACTCCTGCAA+TGG | 0.521107 | 4_3:+64578602 | None:intergenic |
| CAGGATAATCAGGCAAATCA+AGG | 0.522978 | 4_3:+64583760 | None:intergenic |
| CAATATCCATCAAACACAAT+CGG | 0.523236 | 4_3:+64578118 | None:intergenic |
| TTGGTATAGGCTCTGCTCTG+GGG | 0.531133 | 4_3:-64578763 | Msa0655720:intron |
| TCACCAAGTGCATAAGAAAG+AGG | 0.531378 | 4_3:+64578152 | None:intergenic |
| AGAATGAGAGTGACCTTGAT+GGG | 0.535392 | 4_3:+64584450 | None:intergenic |
| CTACTACTACTCAATGCCAT+TGG | 0.537108 | 4_3:+64584559 | None:intergenic |
| CATAATCTGACAAATGCAAA+CGG | 0.538638 | 4_3:+64578223 | None:intergenic |
| CAGAATTATCATCATGGTCA+TGG | 0.538988 | 4_3:+64582326 | None:intergenic |
| TGATTCATTGGCTTTATTTG+GGG | 0.541640 | 4_3:-64583587 | Msa0655720:intron |
| TGGAGGCAGTAAAGTGATGA+TGG | 0.551619 | 4_3:+64584266 | None:intergenic |
| ATTATTGAGGTTCTAGTCGG+TGG | 0.555279 | 4_3:+64584790 | None:intergenic |
| CGCAGAAAAGCTTATAGGGA+AGG | 0.559672 | 4_3:-64578353 | Msa0655720:three_prime_UTR |
| ATTCTTGTGTTGCAGAGAAG+TGG | 0.560445 | 4_3:-64581156 | Msa0655720:intron |
| AAAATTATTGAGGTTCTAGT+CGG | 0.561170 | 4_3:+64584787 | None:intergenic |
| AAGGATAGATCAATACAGAA+TGG | 0.566130 | 4_3:-64578317 | Msa0655720:three_prime_UTR |
| TGGACAGTCATCCCTGATTG+AGG | 0.566660 | 4_3:-64578731 | Msa0655720:intron |
| GTTACTTCCAGAGGAATTAG+CGG | 0.568339 | 4_3:-64584335 | Msa0655720:CDS |
| CATCATGGTCATGGTCTGCA+TGG | 0.569507 | 4_3:+64582335 | None:intergenic |
| TACCAAGAACAATACGATAA+CGG | 0.569706 | 4_3:+64584636 | None:intergenic |
| CATGTCCAGAATTATCATCA+TGG | 0.571839 | 4_3:+64582320 | None:intergenic |
| GACTGCTATACAGCTCAAAA+GGG | 0.571881 | 4_3:+64578185 | None:intergenic |
| TAAAGTGATGATGGTCGTGA+TGG | 0.572558 | 4_3:+64584275 | None:intergenic |
| TGAAGATTTGACATTATCAG+TGG | 0.572617 | 4_3:+64581083 | None:intergenic |
| GGCACATGAAATTCCTCAAG+AGG | 0.573109 | 4_3:-64580822 | Msa0655720:intron |
| TTACAGGGATTTACTGCAGG+TGG | 0.573701 | 4_3:-64578639 | Msa0655720:intron |
| TCTTGCTATTGTGGTTATGG+TGG | 0.575168 | 4_3:+64581697 | None:intergenic |
| TCAGGCAGGAGCTATGTTGG+GGG | 0.576089 | 4_3:-64583332 | Msa0655720:intron |
| GGATGAATTATAACCTCTTG+AGG | 0.577902 | 4_3:+64580809 | None:intergenic |
| AATCTCACTGACAATGGGAA+TGG | 0.580876 | 4_3:-64578532 | Msa0655720:CDS |
| ATGGGAATGGCTGTTGCACT+TGG | 0.581173 | 4_3:-64578519 | Msa0655720:CDS |
| AGCATTCCTCACCTCAATCA+GGG | 0.585792 | 4_3:+64578720 | None:intergenic |
| AGTTCAAGGGAAACCATCAA+AGG | 0.587721 | 4_3:-64583617 | Msa0655720:CDS |
| CATGATGATAATTCTGGACA+TGG | 0.588922 | 4_3:-64582319 | Msa0655720:CDS |
| ATCCATCATCATCACTGTGG+TGG | 0.594782 | 4_3:-64584418 | Msa0655720:CDS |
| CTCCACCACAGTGATGATGA+TGG | 0.595571 | 4_3:+64584416 | None:intergenic |
| TTGCAGAGATGAATGACAAT+GGG | 0.600430 | 4_3:-64578587 | Msa0655720:CDS |
| CTCAGGAGGAGCTAACTCGT+GGG | 0.603723 | 4_3:-64581733 | Msa0655720:CDS |
| TGACTTGCAAGTGCCTTCAA+TGG | 0.606498 | 4_3:+64584597 | None:intergenic |
| AAAGTGATGATGGTCGTGAT+GGG | 0.607012 | 4_3:+64584276 | None:intergenic |
| ACTCAGGAGGAGCTAACTCG+TGG | 0.607499 | 4_3:-64581734 | Msa0655720:CDS |
| TTCTTGTGGAGAAGCTAGTG+AGG | 0.607811 | 4_3:-64581770 | Msa0655720:CDS |
| TCAAGTATCACATGACACAT+TGG | 0.608400 | 4_3:-64581577 | Msa0655720:CDS |
| ACAGTGATGATGATGGATGT+TGG | 0.608711 | 4_3:+64584423 | None:intergenic |
| GATCTGACAAAAGCCCATCA+AGG | 0.609905 | 4_3:-64584463 | Msa0655720:CDS |
| AGTATCACATGACACATTGG+AGG | 0.613160 | 4_3:-64581574 | Msa0655720:CDS |
| AACGGCGATTATTATGCCGA+AGG | 0.619661 | 4_3:+64584654 | None:intergenic |
| CATGAGCATGATCATGATCA+TGG | 0.623435 | 4_3:+64584380 | None:intergenic |
| ACACTCTTAATTCAGTCCAA+TGG | 0.623548 | 4_3:-64584575 | Msa0655720:exon |
| AGGTATGTTGAAGAAAACTC+AGG | 0.625019 | 4_3:-64581750 | Msa0655720:CDS |
| GTATCACATGACACATTGGA+GGG | 0.631044 | 4_3:-64581573 | Msa0655720:CDS |
| GGTGAACATTCCCATTCTCA+TGG | 0.633552 | 4_3:-64582361 | Msa0655720:CDS |
| ACCTAAACCCGATAGTTCAG+TGG | 0.636344 | 4_3:+64584246 | None:intergenic |
| TCAGGAGGAGCTAACTCGTG+GGG | 0.637572 | 4_3:-64581732 | Msa0655720:CDS |
| AAAAGAGTTTGGTAGATGAG+GGG | 0.647576 | 4_3:-64581611 | Msa0655720:CDS |
| CTTGCAGAGATGAATGACAA+TGG | 0.648537 | 4_3:-64578588 | Msa0655720:CDS |
| ACAGTCCAAGTTACTTCCAG+AGG | 0.648851 | 4_3:-64584344 | Msa0655720:CDS |
| AGTGGAAGCAATGCAACCAA+AGG | 0.649556 | 4_3:-64581138 | Msa0655720:CDS |
| CAGGAGGAGCTAACTCGTGG+GGG | 0.677778 | 4_3:-64581731 | Msa0655720:CDS |
| TAAACCCGATAGTTCAGTGG+AGG | 0.679883 | 4_3:+64584249 | None:intergenic |
| AAGTGATGATGGTCGTGATG+GGG | 0.680703 | 4_3:+64584277 | None:intergenic |
| ACTTGGACTGTTGATGAACA+TGG | 0.684814 | 4_3:+64584356 | None:intergenic |
| CTGTGACTGATTGTTGACAT+CGG | 0.696774 | 4_3:+64581650 | None:intergenic |
| TATGTTGAAGAAAACTCAGG+AGG | 0.703074 | 4_3:-64581747 | Msa0655720:CDS |
| CATATCATACCAAAAGCATG+CGG | 0.741356 | 4_3:+64583289 | None:intergenic |
| AACATCCATCATCATCACTG+TGG | 0.759172 | 4_3:-64584421 | Msa0655720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTTTATATTTTGAAAT+TGG | - | chr4_3:64580968-64580987 | Msa0655720:intron | 10.0% |
| !!! | ATGTTTTATAAAATGTATTT+AGG | - | chr4_3:64582528-64582547 | Msa0655720:intron | 10.0% |
| !!! | AATATATACACATTTAATTT+TGG | + | chr4_3:64583677-64583696 | None:intergenic | 10.0% |
| !!! | TTTATTAAATTTCTTCTTTT+TGG | - | chr4_3:64584056-64584075 | Msa0655720:intron | 10.0% |
| !!! | TACAAAATTTTGATTAATCT+GGG | - | chr4_3:64579183-64579202 | Msa0655720:intron | 15.0% |
| !!! | TTTTAATTTAGTAATTTCAC+TGG | - | chr4_3:64579645-64579664 | Msa0655720:intron | 15.0% |
| !! | AAAGTAAAAATACTGAAAAA+AGG | + | chr4_3:64580112-64580131 | None:intergenic | 15.0% |
| !! | AAATACTATTTGACAAAAAA+GGG | + | chr4_3:64580392-64580411 | None:intergenic | 15.0% |
| !! | ATACTTATATGTTGAATTAT+TGG | - | chr4_3:64580644-64580663 | Msa0655720:intron | 15.0% |
| !! | TAATACAAAAAAAAAGAGTT+TGG | - | chr4_3:64581216-64581235 | Msa0655720:intron | 15.0% |
| !! | GTATAACCATATAAAAAATT+AGG | + | chr4_3:64582215-64582234 | None:intergenic | 15.0% |
| !!! | TTACTTTTTAATCCTTATAA+TGG | - | chr4_3:64582587-64582606 | Msa0655720:intron | 15.0% |
| !! | TTAATAAATCATTCTATGTT+TGG | + | chr4_3:64584044-64584063 | None:intergenic | 15.0% |
| !!! | TAGAACCTCAATAATTTTTT+TGG | - | chr4_3:64578056-64578075 | Msa0655720:three_prime_UTR | 20.0% |
| !!! | AGAACCTCAATAATTTTTTT+GGG | - | chr4_3:64578057-64578076 | Msa0655720:three_prime_UTR | 20.0% |
| !! | TATGTTTATTTCAACCATTT+CGG | - | chr4_3:64578668-64578687 | Msa0655720:intron | 20.0% |
| !!! | TAATCAAAATTTTGTACAGT+AGG | + | chr4_3:64579179-64579198 | None:intergenic | 20.0% |
| !!! | GTACAAAATTTTGATTAATC+TGG | - | chr4_3:64579182-64579201 | Msa0655720:intron | 20.0% |
| !! | AAATACAAGAAAAGTAACAT+AGG | + | chr4_3:64579915-64579934 | None:intergenic | 20.0% |
| !!! | TTCAGTATTTTTACTTTTGA+AGG | - | chr4_3:64580115-64580134 | Msa0655720:intron | 20.0% |
| !!! | TTTTTTCCATCAATTAAGAT+AGG | - | chr4_3:64580191-64580210 | Msa0655720:intron | 20.0% |
| !! | AATACTATTTGACAAAAAAG+GGG | + | chr4_3:64580391-64580410 | None:intergenic | 20.0% |
| !! | GAAATACTATTTGACAAAAA+AGG | + | chr4_3:64580393-64580412 | None:intergenic | 20.0% |
| !! | ATTCAACATATAAGTATACA+AGG | + | chr4_3:64580641-64580660 | None:intergenic | 20.0% |
| !! | TGAAATTGGTATTATTTAGA+TGG | - | chr4_3:64580982-64581001 | Msa0655720:intron | 20.0% |
| !! | GAAATTGGTATTATTTAGAT+GGG | - | chr4_3:64580983-64581002 | Msa0655720:intron | 20.0% |
| !! | AAATTGGTATTATTTAGATG+GGG | - | chr4_3:64580984-64581003 | Msa0655720:intron | 20.0% |
| !!! | ACTCTTTTTTTTTGTATTAC+TGG | + | chr4_3:64581215-64581234 | None:intergenic | 20.0% |
| !! | TATGTTATGCCTAATTAAAT+GGG | + | chr4_3:64582111-64582130 | None:intergenic | 20.0% |
| !!! | TTGTGTCCTAATTTTTTATA+TGG | - | chr4_3:64582206-64582225 | Msa0655720:intron | 20.0% |
| !!! | AAGAAGTAATCATTTTATCA+AGG | + | chr4_3:64582263-64582282 | None:intergenic | 20.0% |
| !!! | GATAAAATGATTACTTCTTT+TGG | - | chr4_3:64582264-64582283 | Msa0655720:intron | 20.0% |
| !! | ATCTTAGCAACTAAAAAAAT+GGG | + | chr4_3:64582488-64582507 | None:intergenic | 20.0% |
| !! | AATCTTAGCAACTAAAAAAA+TGG | + | chr4_3:64582489-64582508 | None:intergenic | 20.0% |
| !! | TAAAAAAAACCTTTATGCTT+AGG | - | chr4_3:64582697-64582716 | Msa0655720:intron | 20.0% |
| !! | ACAAATAATAAAGTACGAAA+AGG | + | chr4_3:64583311-64583330 | None:intergenic | 20.0% |
| !!! | AAATTTCTTCTTTTTGGTAT+AGG | - | chr4_3:64584062-64584081 | Msa0655720:intron | 20.0% |
| !!! | ACATTTTATTCATTCTACAA+GGG | + | chr4_3:64584350-64584369 | None:intergenic | 20.0% |
| !!! | AACATTTTATTCATTCTACA+AGG | + | chr4_3:64584351-64584370 | None:intergenic | 20.0% |
| !! | TGAATAAAATGTTCTTTCTT+AGG | - | chr4_3:64584358-64584377 | Msa0655720:CDS | 20.0% |
| !! | TGAATGAAAACAAAAAGAAA+AGG | + | chr4_3:64584772-64584791 | None:intergenic | 20.0% |
| !! | AAAATTATTGAGGTTCTAGT+CGG | + | chr4_3:64578054-64578073 | None:intergenic | 25.0% |
| !!! | GAACCTCAATAATTTTTTTG+GGG | - | chr4_3:64578058-64578077 | Msa0655720:three_prime_UTR | 25.0% |
| !!! | TGCTTTTTTCCATTTCTTAT+CGG | + | chr4_3:64578088-64578107 | None:intergenic | 25.0% |
| ! | GGTTGAAATAAACATAAAAG+AGG | + | chr4_3:64578664-64578683 | None:intergenic | 25.0% |
| !!! | TTTTGGGGTTTATCAAATTT+AGG | - | chr4_3:64578721-64578740 | Msa0655720:intron | 25.0% |
| !! | AGGAATTTTGCCAAAATAAA+TGG | - | chr4_3:64578741-64578760 | Msa0655720:CDS | 25.0% |
| !! | GGAATTTTGCCAAAATAAAT+GGG | - | chr4_3:64578742-64578761 | Msa0655720:CDS | 25.0% |
| ! | TTGTTTCATATGTGACATTT+AGG | - | chr4_3:64579008-64579027 | Msa0655720:intron | 25.0% |
| !!! | TTGATTCATTGGCTTTATTT+GGG | - | chr4_3:64579250-64579269 | Msa0655720:intron | 25.0% |
| ! | AAGATAGTGAAACTAAAGAA+AGG | + | chr4_3:64579294-64579313 | None:intergenic | 25.0% |
| ! | TGTTTGTAAGTTATGATTGT+CGG | - | chr4_3:64579363-64579382 | Msa0655720:intron | 25.0% |
| !! | TCATTTACCATATCTTTTTC+AGG | - | chr4_3:64579488-64579507 | Msa0655720:intron | 25.0% |
| ! | GAAACAAAATCAATCAACAA+AGG | + | chr4_3:64579605-64579624 | None:intergenic | 25.0% |
| !!! | GTTGATTGATTTTGTTTCAA+TGG | - | chr4_3:64579607-64579626 | Msa0655720:intron | 25.0% |
| !!! | ATTGATTTTGTTTCAATGGA+AGG | - | chr4_3:64579611-64579630 | Msa0655720:intron | 25.0% |
| ! | AAAAATACTGAAAAAAGGTC+AGG | + | chr4_3:64580107-64580126 | None:intergenic | 25.0% |
| ! | AATAAAAACAGAGAAGAATG+TGG | + | chr4_3:64580168-64580187 | None:intergenic | 25.0% |
| ! | AATTCTCCTATCTTAATTGA+TGG | + | chr4_3:64580200-64580219 | None:intergenic | 25.0% |
| ! | TCAATTAAGATAGGAGAATT+TGG | - | chr4_3:64580200-64580219 | Msa0655720:intron | 25.0% |
| ! | CAATTAAGATAGGAGAATTT+GGG | - | chr4_3:64580201-64580220 | Msa0655720:intron | 25.0% |
| !!! | TTTGGGATAATTGATTCTTT+TGG | - | chr4_3:64580218-64580237 | Msa0655720:intron | 25.0% |
| !! | TGGTATGTTTTACTTGTAAT+AGG | - | chr4_3:64580238-64580257 | Msa0655720:intron | 25.0% |
| ! | GCTGCAATCTATAAAATAAA+AGG | + | chr4_3:64580344-64580363 | None:intergenic | 25.0% |
| ! | ATATGATTCTCTTTAACTGT+AGG | - | chr4_3:64580450-64580469 | Msa0655720:intron | 25.0% |
| ! | CAATTAATTAGTGGAAGAAA+AGG | + | chr4_3:64580673-64580692 | None:intergenic | 25.0% |
| ! | TATTCCATGCAATTAATTAG+TGG | + | chr4_3:64580682-64580701 | None:intergenic | 25.0% |
| !!! | ATAATTTTAGCATCAGAGAA+AGG | - | chr4_3:64580735-64580754 | Msa0655720:intron | 25.0% |
| ! | AATACATAGTAAGAATGAGA+GGG | + | chr4_3:64581017-64581036 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTCTTGCTATTG+TGG | + | chr4_3:64581153-64581172 | None:intergenic | 25.0% |
| ! | AACATCAGAAATTACAACAA+TGG | + | chr4_3:64581421-64581440 | None:intergenic | 25.0% |
| ! | TTGTTGTAATTTCTGATGTT+TGG | - | chr4_3:64581421-64581440 | Msa0655720:intron | 25.0% |
| ! | GACAGTTATTAAAGACAAAT+AGG | - | chr4_3:64581455-64581474 | Msa0655720:intron | 25.0% |
| ! | AAAACTTGAATAGCCATAAT+AGG | - | chr4_3:64581484-64581503 | Msa0655720:intron | 25.0% |
| ! | ATATTTGTAGTACATTACAG+AGG | - | chr4_3:64581559-64581578 | Msa0655720:CDS | 25.0% |
| ! | AGGTAAAATGTTACGAATAT+TGG | + | chr4_3:64582082-64582101 | None:intergenic | 25.0% |
| ! | CTATGTTATGCCTAATTAAA+TGG | + | chr4_3:64582112-64582131 | None:intergenic | 25.0% |
| !!! | TATTTTATTCCCCTAGTTTT+TGG | - | chr4_3:64582429-64582448 | Msa0655720:intron | 25.0% |
| ! | TGTATTTAGGCTATAATTTC+TGG | - | chr4_3:64582541-64582560 | Msa0655720:intron | 25.0% |
| !! | TAATGATTGATCTTTTATGC+AGG | + | chr4_3:64582649-64582668 | None:intergenic | 25.0% |
| ! | AAAGCAAGATACTAAATACA+TGG | + | chr4_3:64582910-64582929 | None:intergenic | 25.0% |
| !! | GGGAAGTATAAATCAATATT+AGG | - | chr4_3:64583027-64583046 | Msa0655720:intron | 25.0% |
| !!! | TTTTTTTTCTCTCTTCCTAT+TGG | + | chr4_3:64583177-64583196 | None:intergenic | 25.0% |
| ! | ATAGGAAGAGAGAAAAAAAA+AGG | - | chr4_3:64583177-64583196 | Msa0655720:intron | 25.0% |
| ! | AAAAAAAAAGGTTGTCACAA+AGG | - | chr4_3:64583189-64583208 | Msa0655720:intron | 25.0% |
| ! | ATGATATTTGTACAACCATT+TGG | + | chr4_3:64583070-64583089 | None:intergenic | 25.0% |
| ! | GTTGTACAAATATCATTACT+CGG | - | chr4_3:64583225-64583244 | Msa0655720:intron | 25.0% |
| !!! | CATCTGTTTCAGATATTTTT+TGG | - | chr4_3:64583432-64583451 | Msa0655720:intron | 25.0% |
| !!! | TTTTTGTTTCTTCTTCATAC+AGG | - | chr4_3:64583477-64583496 | Msa0655720:intron | 25.0% |
| !!! | TTTGGTATTTTGATAAGATC+TGG | - | chr4_3:64583508-64583527 | Msa0655720:intron | 25.0% |
| ! | AGTATTGTCTTCATTCAATA+GGG | - | chr4_3:64583604-64583623 | Msa0655720:CDS | 25.0% |
| !! | TGTTCACAAATTTTGTAGTT+AGG | - | chr4_3:64583710-64583729 | Msa0655720:intron | 25.0% |
| ! | CATTCACAATATGATTCATA+AGG | + | chr4_3:64583746-64583765 | None:intergenic | 25.0% |
| ! | TTGGACATACTAATAATGAA+GGG | + | chr4_3:64584025-64584044 | None:intergenic | 25.0% |
| ! | TTTGGACATACTAATAATGA+AGG | + | chr4_3:64584026-64584045 | None:intergenic | 25.0% |
| !!! | TGACTATCTCTTATTTTACA+GGG | - | chr4_3:64584184-64584203 | Msa0655720:intron | 25.0% |
| ! | CTTACACTTAGTGTAATAAT+TGG | + | chr4_3:64584410-64584429 | None:intergenic | 25.0% |
| CAACCCCAAAAAAATTATTG+AGG | + | chr4_3:64578064-64578083 | None:intergenic | 30.0% | |
| TACTCCTATGTTAGAAGAAA+TGG | - | chr4_3:64578152-64578171 | Msa0655720:three_prime_UTR | 30.0% | |
| ACATCCATTTCTTCTAACAT+AGG | + | chr4_3:64578159-64578178 | None:intergenic | 30.0% | |
| TACCAAGAACAATACGATAA+CGG | + | chr4_3:64578205-64578224 | None:intergenic | 30.0% | |
| AAATGCAACTATTCGTGAAA+TGG | - | chr4_3:64578697-64578716 | Msa0655720:intron | 30.0% | |
| AATGCAACTATTCGTGAAAT+GGG | - | chr4_3:64578698-64578717 | Msa0655720:intron | 30.0% | |
| TTAGTAAAAACAAGCTTTCC+TGG | - | chr4_3:64578795-64578814 | Msa0655720:intron | 30.0% | |
| ACAAACTGAGGAATCAAATA+AGG | + | chr4_3:64578821-64578840 | None:intergenic | 30.0% | |
| TCCTCAGTTTGTAATCATTA+TGG | - | chr4_3:64578829-64578848 | Msa0655720:intron | 30.0% | |
| TCCATAATGATTACAAACTG+AGG | + | chr4_3:64578833-64578852 | None:intergenic | 30.0% | |
| GTAGAAAATGCACTAAAAAC+AGG | + | chr4_3:64578872-64578891 | None:intergenic | 30.0% | |
| TCCACTTAAATCTGCATAAT+TGG | - | chr4_3:64578899-64578918 | Msa0655720:intron | 30.0% | |
| CCACTTAAATCTGCATAATT+GGG | - | chr4_3:64578900-64578919 | Msa0655720:intron | 30.0% | |
| ATATGTGACATTTAGGTCTT+TGG | - | chr4_3:64579015-64579034 | Msa0655720:intron | 30.0% | |
| ! | ATTATCCTGCCTGTAATTTT+TGG | - | chr4_3:64579092-64579111 | Msa0655720:intron | 30.0% |
| AACTGCTTACCAAAAATTAC+AGG | + | chr4_3:64579104-64579123 | None:intergenic | 30.0% | |
| ! | CAAAATTTTGTACAGTAGGT+AGG | + | chr4_3:64579175-64579194 | None:intergenic | 30.0% |
| !! | GTTGATTCATTGGCTTTATT+TGG | - | chr4_3:64579249-64579268 | Msa0655720:intron | 30.0% |
| !! | TGATTCATTGGCTTTATTTG+GGG | - | chr4_3:64579251-64579270 | Msa0655720:intron | 30.0% |
| ATTACTTTCTGTCAGTAACT+TGG | - | chr4_3:64579412-64579431 | Msa0655720:intron | 30.0% | |
| TCTCAATTACGTTTAGATGT+TGG | - | chr4_3:64579764-64579783 | Msa0655720:intron | 30.0% | |
| TTCTGTGATTTGATGTCATT+AGG | - | chr4_3:64579831-64579850 | Msa0655720:intron | 30.0% | |
| TCTGTGATTTGATGTCATTA+GGG | - | chr4_3:64579832-64579851 | Msa0655720:intron | 30.0% | |
| CACAACATATTAGAGGAAAA+AGG | + | chr4_3:64579886-64579905 | None:intergenic | 30.0% | |
| CATAACATTAGTGATCAAAC+TGG | + | chr4_3:64579968-64579987 | None:intergenic | 30.0% | |
| TAGCTCATTATGCATTATTG+TGG | - | chr4_3:64580280-64580299 | Msa0655720:intron | 30.0% | |
| AGCTCATTATGCATTATTGT+GGG | - | chr4_3:64580281-64580300 | Msa0655720:intron | 30.0% | |
| AGGTGAATAATCAACATGTT+CGG | + | chr4_3:64580621-64580640 | None:intergenic | 30.0% | |
| TCTTCCACTAATTAATTGCA+TGG | - | chr4_3:64580675-64580694 | Msa0655720:intron | 30.0% | |
| !! | ATCAGTGTATTGATTGAAGA+TGG | - | chr4_3:64580843-64580862 | Msa0655720:CDS | 30.0% |
| GAATACATAGTAAGAATGAG+AGG | + | chr4_3:64581018-64581037 | None:intergenic | 30.0% | |
| CTCATTCTTACTATGTATTC+TGG | - | chr4_3:64581018-64581037 | Msa0655720:CDS | 30.0% | |
| AATTGTACTCTTTCTTCTTG+TGG | - | chr4_3:64581054-64581073 | Msa0655720:CDS | 30.0% | |
| !!! | TTTTCTTGCTATTGTGGTTA+TGG | + | chr4_3:64581147-64581166 | None:intergenic | 30.0% |
| AAAAAAGAGTTTGGTAGATG+AGG | - | chr4_3:64581225-64581244 | Msa0655720:intron | 30.0% | |
| AAAAAGAGTTTGGTAGATGA+GGG | - | chr4_3:64581226-64581245 | Msa0655720:intron | 30.0% | |
| TATTCAAGTCTAACCAATAG+TGG | + | chr4_3:64581358-64581377 | None:intergenic | 30.0% | |
| GCTATTAAAAATCCTAGTGT+AGG | + | chr4_3:64581396-64581415 | None:intergenic | 30.0% | |
| CTAGTGTAACAAACCTATTA+TGG | + | chr4_3:64581500-64581519 | None:intergenic | 30.0% | |
| ATTTAGGCTGAAAGGTAATT+TGG | - | chr4_3:64581620-64581639 | Msa0655720:CDS | 30.0% | |
| TGAAGATTTGACATTATCAG+TGG | + | chr4_3:64581758-64581777 | None:intergenic | 30.0% | |
| ! | TATCTCAATCTTTTCTCTGA+TGG | - | chr4_3:64581823-64581842 | Msa0655720:intron | 30.0% |
| !! | AAGTTGTATTGACCTTTTGT+TGG | - | chr4_3:64581852-64581871 | Msa0655720:intron | 30.0% |
| TTCATTCTTTATGGATCTGT+TGG | - | chr4_3:64581966-64581985 | Msa0655720:intron | 30.0% | |
| ACTGAGCATGTTATAAGATA+AGG | + | chr4_3:64582053-64582072 | None:intergenic | 30.0% | |
| !! | TCTTTCATTTTTCTTGTTGC+TGG | - | chr4_3:64582236-64582255 | Msa0655720:intron | 30.0% |
| TCATAAGGTTTGGAGAAATA+AGG | - | chr4_3:64582747-64582766 | Msa0655720:intron | 30.0% | |
| CATAAGGTTTGGAGAAATAA+GGG | - | chr4_3:64582748-64582767 | Msa0655720:intron | 30.0% | |
| ATAAGGTTTGGAGAAATAAG+GGG | - | chr4_3:64582749-64582768 | Msa0655720:intron | 30.0% | |
| ! | GCAATTAAGTTGTTAACACA+CGG | + | chr4_3:64582775-64582794 | None:intergenic | 30.0% |
| !!! | ATGACTGAGGTTTTAAATCT+CGG | - | chr4_3:64582931-64582950 | Msa0655720:intron | 30.0% |
| ATCACAAGCACAATAATAGT+TGG | + | chr4_3:64582993-64583012 | None:intergenic | 30.0% | |
| CTATTATTGTGCTTGTGATA+TGG | - | chr4_3:64582994-64583013 | Msa0655720:intron | 30.0% | |
| GTTCAAAAGTTGTCACAAAA+TGG | + | chr4_3:64583088-64583107 | None:intergenic | 30.0% | |
| ! | TCATTACTCGGTCTTTTAAT+AGG | - | chr4_3:64583237-64583256 | Msa0655720:intron | 30.0% |
| ! | CATTACTCGGTCTTTTAATA+GGG | - | chr4_3:64583238-64583257 | Msa0655720:intron | 30.0% |
| ! | ATTACTCGGTCTTTTAATAG+GGG | - | chr4_3:64583239-64583258 | Msa0655720:intron | 30.0% |
| ! | AACAAAAAGCATAAAACTCC+TGG | + | chr4_3:64583465-64583484 | None:intergenic | 30.0% |
| ! | AAGTTGAAGAACAAAGCTTT+TGG | + | chr4_3:64583544-64583563 | None:intergenic | 30.0% |
| ! | GAGTATTGTCTTCATTCAAT+AGG | - | chr4_3:64583603-64583622 | Msa0655720:CDS | 30.0% |
| TTCAATAGGGAGATGTTTAA+TGG | - | chr4_3:64583617-64583636 | Msa0655720:CDS | 30.0% | |
| ATCATATTGTGAATGAGCAT+TGG | - | chr4_3:64583751-64583770 | Msa0655720:CDS | 30.0% | |
| !! | TTAAAGAGTTGTTTTACTCG+AGG | - | chr4_3:64583914-64583933 | Msa0655720:intron | 30.0% |
| !! | TAAAGAGTTGTTTTACTCGA+GGG | - | chr4_3:64583915-64583934 | Msa0655720:intron | 30.0% |
| ! | AGGGTATCAAATCAAGTAAA+GGG | + | chr4_3:64584006-64584025 | None:intergenic | 30.0% |
| !! | AAGGGTATCAAATCAAGTAA+AGG | + | chr4_3:64584007-64584026 | None:intergenic | 30.0% |
| !!! | CTGACTATCTCTTATTTTAC+AGG | - | chr4_3:64584183-64584202 | Msa0655720:intron | 30.0% |
| TCAAATAATCTCACTGACAA+TGG | - | chr4_3:64584300-64584319 | Msa0655720:CDS | 30.0% | |
| CAAATAATCTCACTGACAAT+GGG | - | chr4_3:64584301-64584320 | Msa0655720:CDS | 30.0% | |
| AAGGATAGATCAATACAGAA+TGG | - | chr4_3:64584521-64584540 | Msa0655720:CDS | 30.0% | |
| GTTTACTGTGTTAATGGTTA+AGG | + | chr4_3:64584570-64584589 | None:intergenic | 30.0% | |
| TACACAGTTTACTGTGTTAA+TGG | + | chr4_3:64584576-64584595 | None:intergenic | 30.0% | |
| CATAATCTGACAAATGCAAA+CGG | + | chr4_3:64584618-64584637 | None:intergenic | 30.0% | |
| CAATATCCATCAAACACAAT+CGG | + | chr4_3:64584723-64584742 | None:intergenic | 30.0% | |
| GAAAAGGACAAAGACAAATA+AGG | + | chr4_3:64584756-64584775 | None:intergenic | 30.0% | |
| GAAATGGATGTGATAACCTT+CGG | - | chr4_3:64578168-64578187 | Msa0655720:three_prime_UTR | 35.0% | |
| ACACTCTTAATTCAGTCCAA+TGG | - | chr4_3:64578263-64578282 | Msa0655720:three_prime_UTR | 35.0% | |
| ! | TTTTGTCAGATCCAAAAAGG+AGG | + | chr4_3:64578367-64578386 | None:intergenic | 35.0% |
| ! | TAATTCCTCTGGAAGTAACT+TGG | + | chr4_3:64578502-64578521 | None:intergenic | 35.0% |
| GAGGAAGATATGAAACTCTA+TGG | - | chr4_3:64578528-64578547 | Msa0655720:CDS | 35.0% | |
| TTCACGAATAGTTGCATTTG+AGG | + | chr4_3:64578696-64578715 | None:intergenic | 35.0% | |
| !! | ACTATTCGTGAAATGGGTTT+TGG | - | chr4_3:64578704-64578723 | Msa0655720:intron | 35.0% |
| !! | CTATTCGTGAAATGGGTTTT+GGG | - | chr4_3:64578705-64578724 | Msa0655720:intron | 35.0% |
| !! | TATTCGTGAAATGGGTTTTG+GGG | - | chr4_3:64578706-64578725 | Msa0655720:intron | 35.0% |
| !!! | TCACAGTGCTTTTTCAATTG+AGG | - | chr4_3:64578765-64578784 | Msa0655720:intron | 35.0% |
| CCCAATTATGCAGATTTAAG+TGG | + | chr4_3:64578903-64578922 | None:intergenic | 35.0% | |
| TAAATGCTATTCTTGCTTGC+TGG | - | chr4_3:64578962-64578981 | Msa0655720:intron | 35.0% | |
| AAATTACAGGCAGGATAATC+AGG | + | chr4_3:64579091-64579110 | None:intergenic | 35.0% | |
| TATTCACCTGTTTCAGTTCA+AGG | - | chr4_3:64579207-64579226 | Msa0655720:intron | 35.0% | |
| ATTCACCTGTTTCAGTTCAA+GGG | - | chr4_3:64579208-64579227 | Msa0655720:intron | 35.0% | |
| !! | AAAGGCTGTTGTTGATTCAT+TGG | - | chr4_3:64579239-64579258 | Msa0655720:intron | 35.0% |
| !! | AGCTTTGTGTCTTTTGTTTC+TGG | - | chr4_3:64579445-64579464 | Msa0655720:intron | 35.0% |
| !!! | TTACCATATCTTTTTCAGGC+AGG | - | chr4_3:64579492-64579511 | Msa0655720:intron | 35.0% |
| ! | CATATCATACCAAAAGCATG+CGG | + | chr4_3:64579552-64579571 | None:intergenic | 35.0% |
| AATTGGATTTCTATGCAGCA+TGG | + | chr4_3:64579691-64579710 | None:intergenic | 35.0% | |
| GTACACACACAACATATTAG+AGG | + | chr4_3:64579893-64579912 | None:intergenic | 35.0% | |
| !! | CTTGTATTTTGTGTTGACCT+TGG | - | chr4_3:64579926-64579945 | Msa0655720:intron | 35.0% |
| CCATACATGATTTCTTCCAA+GGG | + | chr4_3:64580023-64580042 | None:intergenic | 35.0% | |
| AAAAGGGGACAGTAAAACTA+TGG | + | chr4_3:64580376-64580395 | None:intergenic | 35.0% | |
| TGATTCTCTTTAACTGTAGG+TGG | - | chr4_3:64580453-64580472 | Msa0655720:intron | 35.0% | |
| CAGAATTATCATCATGGTCA+TGG | + | chr4_3:64580515-64580534 | None:intergenic | 35.0% | |
| CATGACCATGATGATAATTC+TGG | - | chr4_3:64580513-64580532 | Msa0655720:intron | 35.0% | |
| CATGTCCAGAATTATCATCA+TGG | + | chr4_3:64580521-64580540 | None:intergenic | 35.0% | |
| CATGATGATAATTCTGGACA+TGG | - | chr4_3:64580519-64580538 | Msa0655720:intron | 35.0% | |
| TCTTTAGCTGATCTTTCTAC+AGG | - | chr4_3:64580552-64580571 | Msa0655720:intron | 35.0% | |
| AAGCATATCACTACAAACCT+AGG | + | chr4_3:64580587-64580606 | None:intergenic | 35.0% | |
| !! | AGTGTATTGATTGAAGATGG+AGG | - | chr4_3:64580846-64580865 | Msa0655720:CDS | 35.0% |
| AACCACCATCCTTCATAAAT+TGG | - | chr4_3:64580891-64580910 | Msa0655720:CDS | 35.0% | |
| ACCACCATCCTTCATAAATT+GGG | - | chr4_3:64580892-64580911 | Msa0655720:CDS | 35.0% | |
| AGGTATGTTGAAGAAAACTC+AGG | - | chr4_3:64581088-64581107 | Msa0655720:CDS | 35.0% | |
| TATGTTGAAGAAAACTCAGG+AGG | - | chr4_3:64581091-64581110 | Msa0655720:CDS | 35.0% | |
| AAAAGAGTTTGGTAGATGAG+GGG | - | chr4_3:64581227-64581246 | Msa0655720:intron | 35.0% | |
| TCAAGTATCACATGACACAT+TGG | - | chr4_3:64581261-64581280 | Msa0655720:intron | 35.0% | |
| ATCTAAATCCTCGCTTAGAA+AGG | - | chr4_3:64581303-64581322 | Msa0655720:intron | 35.0% | |
| ! | TCATTTTACCTTTCTAAGCG+AGG | + | chr4_3:64581314-64581333 | None:intergenic | 35.0% |
| TCGCTTAGAAAGGTAAAATG+AGG | - | chr4_3:64581313-64581332 | Msa0655720:intron | 35.0% | |
| CATGTGATTTAGCCTCATTT+AGG | - | chr4_3:64581604-64581623 | Msa0655720:CDS | 35.0% | |
| ATTACCTTTCAGCCTAAATG+AGG | + | chr4_3:64581619-64581638 | None:intergenic | 35.0% | |
| ATCATTCTGACTACTACCTT+TGG | + | chr4_3:64581719-64581738 | None:intergenic | 35.0% | |
| CCTTCAATTCAACCAACAAA+AGG | + | chr4_3:64581867-64581886 | None:intergenic | 35.0% | |
| !! | CCTTTTGTTGGTTGAATTGA+AGG | - | chr4_3:64581864-64581883 | Msa0655720:intron | 35.0% |
| TTGCAGCATAATTTCACTGA+TGG | - | chr4_3:64581924-64581943 | Msa0655720:intron | 35.0% | |
| TTCACTGATGGAATTGCATT+AGG | - | chr4_3:64581936-64581955 | Msa0655720:intron | 35.0% | |
| ! | GGAAGTGCATTCATTCTTTA+TGG | - | chr4_3:64581957-64581976 | Msa0655720:intron | 35.0% |
| ATTCTTTATGGATCTGTTGG+TGG | - | chr4_3:64581969-64581988 | Msa0655720:intron | 35.0% | |
| !!! | GTCTAGAACTCTGTTTTTGT+TGG | - | chr4_3:64581995-64582014 | Msa0655720:intron | 35.0% |
| !! | TGTAGTGGACAACTTACAAA+AGG | - | chr4_3:64582134-64582153 | Msa0655720:intron | 35.0% |
| ! | TACTGCTTAAGTTTTCGCTA+TGG | - | chr4_3:64582356-64582375 | Msa0655720:CDS | 35.0% |
| !! | TTTATTCCCCTAGTTTTTGG+CGG | - | chr4_3:64582432-64582451 | Msa0655720:intron | 35.0% |
| TTAGTTGCTAAGATTCTCGT+TGG | - | chr4_3:64582494-64582513 | Msa0655720:intron | 35.0% | |
| GCACAAATTCAGCCATTATA+AGG | + | chr4_3:64582602-64582621 | None:intergenic | 35.0% | |
| CTTATCACTCCTAAGCATAA+AGG | + | chr4_3:64582709-64582728 | None:intergenic | 35.0% | |
| CTTTATGCTTAGGAGTGATA+AGG | - | chr4_3:64582707-64582726 | Msa0655720:intron | 35.0% | |
| TTGTGATATGGTCTCTATTC+AGG | - | chr4_3:64583006-64583025 | Msa0655720:intron | 35.0% | |
| TGTGATATGGTCTCTATTCA+GGG | - | chr4_3:64583007-64583026 | Msa0655720:intron | 35.0% | |
| ACGACAATAGAGAGAGAAAA+AGG | + | chr4_3:64583151-64583170 | None:intergenic | 35.0% | |
| ! | AAAAGCATAAAACTCCTGGT+GGG | + | chr4_3:64583461-64583480 | None:intergenic | 35.0% |
| ! | AAAAAGCATAAAACTCCTGG+TGG | + | chr4_3:64583462-64583481 | None:intergenic | 35.0% |
| TGTTTCTTCTTCATACAGGT+TGG | - | chr4_3:64583481-64583500 | Msa0655720:intron | 35.0% | |
| !!! | TTCATACAGGTTGGTGATTT+TGG | - | chr4_3:64583490-64583509 | Msa0655720:intron | 35.0% |
| ! | CAACTTTTTATCTGCACTTG+TGG | - | chr4_3:64583558-64583577 | Msa0655720:intron | 35.0% |
| TCATAGCTTCGATATTGTAC+AGG | + | chr4_3:64583865-64583884 | None:intergenic | 35.0% | |
| ! | AGTTTGCGGATTGAGTTATT+GGG | - | chr4_3:64583938-64583957 | Msa0655720:intron | 35.0% |
| GGGTATCAAATCAAGTAAAG+GGG | + | chr4_3:64584005-64584024 | None:intergenic | 35.0% | |
| ! | GTTGAGTTGTAAGCAGAATT+TGG | - | chr4_3:64584158-64584177 | Msa0655720:intron | 35.0% |
| ! | ATTTTACAGGGATTTACTGC+AGG | - | chr4_3:64584196-64584215 | Msa0655720:intron | 35.0% |
| TTTATATACATCGCCATTGC+AGG | - | chr4_3:64584223-64584242 | Msa0655720:intron | 35.0% | |
| TTGCAGAGATGAATGACAAT+GGG | - | chr4_3:64584251-64584270 | Msa0655720:CDS | 35.0% | |
| TGAACGCAGAAAAGCTTATA+GGG | - | chr4_3:64584481-64584500 | Msa0655720:CDS | 35.0% | |
| TAGATCAATACAGAATGGTC+AGG | - | chr4_3:64584526-64584545 | Msa0655720:CDS | 35.0% | |
| TTTCCTCTTTCTTATGCACT+TGG | - | chr4_3:64584683-64584702 | Msa0655720:five_prime_UTR | 35.0% | |
| ! | AAATCACCGATTGTGTTTGA+TGG | - | chr4_3:64584714-64584733 | Msa0655720:five_prime_UTR | 35.0% |
| ! | ATTATTGAGGTTCTAGTCGG+TGG | + | chr4_3:64578051-64578070 | None:intergenic | 40.0% |
| CTACTACTACTCAATGCCAT+TGG | + | chr4_3:64578282-64578301 | None:intergenic | 40.0% | |
| ! | GTTTCTTTGCTCCTCCTTTT+TGG | - | chr4_3:64578353-64578372 | Msa0655720:three_prime_UTR | 40.0% |
| ! | GGCTTTTGTCAGATCCAAAA+AGG | + | chr4_3:64578370-64578389 | None:intergenic | 40.0% |
| AGAATGAGAGTGACCTTGAT+GGG | + | chr4_3:64578391-64578410 | None:intergenic | 40.0% | |
| TAGAATGAGAGTGACCTTGA+TGG | + | chr4_3:64578392-64578411 | None:intergenic | 40.0% | |
| !! | CAGTGATGATGATGGATGTT+GGG | + | chr4_3:64578417-64578436 | None:intergenic | 40.0% |
| !! | ACAGTGATGATGATGGATGT+TGG | + | chr4_3:64578418-64578437 | None:intergenic | 40.0% |
| AACATCCATCATCATCACTG+TGG | - | chr4_3:64578417-64578436 | Msa0655720:three_prime_UTR | 40.0% | |
| CATGAGCATGATCATGATCA+TGG | + | chr4_3:64578461-64578480 | None:intergenic | 40.0% | |
| ! | ACTTGGACTGTTGATGAACA+TGG | + | chr4_3:64578485-64578504 | None:intergenic | 40.0% |
| GTTACTTCCAGAGGAATTAG+CGG | - | chr4_3:64578503-64578522 | Msa0655720:CDS | 40.0% | |
| !! | AAAGTGATGATGGTCGTGAT+GGG | + | chr4_3:64578565-64578584 | None:intergenic | 40.0% |
| !! | TAAAGTGATGATGGTCGTGA+TGG | + | chr4_3:64578566-64578585 | None:intergenic | 40.0% |
| TTGCATTTGAGGAACCGAAA+TGG | + | chr4_3:64578685-64578704 | None:intergenic | 40.0% | |
| ! | GCACTGTGACCCATTTATTT+TGG | + | chr4_3:64578754-64578773 | None:intergenic | 40.0% |
| !! | CTGTTCATTTCTAGTGAGCA+TGG | - | chr4_3:64579052-64579071 | Msa0655720:intron | 40.0% |
| CAGGATAATCAGGCAAATCA+AGG | + | chr4_3:64579081-64579100 | None:intergenic | 40.0% | |
| GCTTACCAAAAATTACAGGC+AGG | + | chr4_3:64579100-64579119 | None:intergenic | 40.0% | |
| AGTTCAAGGGAAACCATCAA+AGG | - | chr4_3:64579221-64579240 | Msa0655720:intron | 40.0% | |
| GAATCAACAACAGCCTTTGA+TGG | + | chr4_3:64579237-64579256 | None:intergenic | 40.0% | |
| GCACAACTGTTAATACTCCA+AGG | + | chr4_3:64579946-64579965 | None:intergenic | 40.0% | |
| GATGTTTGTCAATCATCCCT+TGG | - | chr4_3:64580004-64580023 | Msa0655720:intron | 40.0% | |
| CCCTTGGAAGAAATCATGTA+TGG | - | chr4_3:64580020-64580039 | Msa0655720:intron | 40.0% | |
| GCCATACATGATTTCTTCCA+AGG | + | chr4_3:64580024-64580043 | None:intergenic | 40.0% | |
| TGTATGGCATGCTAATGAGA+CGG | - | chr4_3:64580036-64580055 | Msa0655720:intron | 40.0% | |
| ATGAGACGGGACTAAAAGTT+TGG | - | chr4_3:64580050-64580069 | Msa0655720:intron | 40.0% | |
| !! | TACTTTTGAAGGAAGCTGAG+TGG | - | chr4_3:64580126-64580145 | Msa0655720:intron | 40.0% |
| GGGACAGTAAAACTATGGAA+AGG | + | chr4_3:64580371-64580390 | None:intergenic | 40.0% | |
| TTCTCTTTAACTGTAGGTGG+TGG | - | chr4_3:64580456-64580475 | Msa0655720:intron | 40.0% | |
| CATGCCCAATTTATGAAGGA+TGG | + | chr4_3:64580899-64580918 | None:intergenic | 40.0% | |
| CATCCTTCATAAATTGGGCA+TGG | - | chr4_3:64580897-64580916 | Msa0655720:CDS | 40.0% | |
| TTGTCAAATATCCGCCATGA+TGG | + | chr4_3:64580925-64580944 | None:intergenic | 40.0% | |
| !! | TCTTGCTATTGTGGTTATGG+TGG | + | chr4_3:64581144-64581163 | None:intergenic | 40.0% |
| CTGTGACTGATTGTTGACAT+CGG | + | chr4_3:64581191-64581210 | None:intergenic | 40.0% | |
| AGTATCACATGACACATTGG+AGG | - | chr4_3:64581264-64581283 | Msa0655720:intron | 40.0% | |
| GTATCACATGACACATTGGA+GGG | - | chr4_3:64581265-64581284 | Msa0655720:intron | 40.0% | |
| !!! | CTACAGTTTTGGACCACTAT+TGG | - | chr4_3:64581342-64581361 | Msa0655720:intron | 40.0% |
| ATTGATGTCACACCTACACT+AGG | - | chr4_3:64581381-64581400 | Msa0655720:intron | 40.0% | |
| TTAGCCTCATTTAGGCTGAA+AGG | - | chr4_3:64581612-64581631 | Msa0655720:CDS | 40.0% | |
| ATTCTTGTGTTGCAGAGAAG+TGG | - | chr4_3:64581682-64581701 | Msa0655720:CDS | 40.0% | |
| CCTAATTAAATGGGATGCTG+AGG | + | chr4_3:64582102-64582121 | None:intergenic | 40.0% | |
| CCTCAGCATCCCATTTAATT+AGG | - | chr4_3:64582099-64582118 | Msa0655720:intron | 40.0% | |
| AGGCATAACATAGACTGTAG+TGG | - | chr4_3:64582119-64582138 | Msa0655720:intron | 40.0% | |
| TATTAGCCGCCAAAAACTAG+GGG | + | chr4_3:64582441-64582460 | None:intergenic | 40.0% | |
| GTATTAGCCGCCAAAAACTA+GGG | + | chr4_3:64582442-64582461 | None:intergenic | 40.0% | |
| TGTATTAGCCGCCAAAAACT+AGG | + | chr4_3:64582443-64582462 | None:intergenic | 40.0% | |
| ! | TGATCTTTTATGCAGGAAGC+AGG | + | chr4_3:64582642-64582661 | None:intergenic | 40.0% |
| TATGCTTAGGAGTGATAAGG+TGG | - | chr4_3:64582710-64582729 | Msa0655720:intron | 40.0% | |
| ATGCTTAGGAGTGATAAGGT+GGG | - | chr4_3:64582711-64582730 | Msa0655720:intron | 40.0% | |
| GGGTGAAAGATCATAAGGTT+TGG | - | chr4_3:64582737-64582756 | Msa0655720:intron | 40.0% | |
| GTATCTTGCTTTCATGACTG+AGG | - | chr4_3:64582918-64582937 | Msa0655720:intron | 40.0% | |
| CTCTATTGTCGTTGACCAAT+AGG | - | chr4_3:64583159-64583178 | Msa0655720:intron | 40.0% | |
| TCACAAAGGTTGTCACCAAA+TGG | - | chr4_3:64583203-64583222 | Msa0655720:intron | 40.0% | |
| ACGAAAAGGAATGTACGAGA+TGG | + | chr4_3:64583297-64583316 | None:intergenic | 40.0% | |
| !!! | ATATTTTTTGGTTCCCCACC+AGG | - | chr4_3:64583444-64583463 | Msa0655720:intron | 40.0% |
| AAAGCATAAAACTCCTGGTG+GGG | + | chr4_3:64583460-64583479 | None:intergenic | 40.0% | |
| !! | TGAGCATTGGAGAAACGAAA+TGG | - | chr4_3:64583764-64583783 | Msa0655720:CDS | 40.0% |
| ! | GAGTTTGCGGATTGAGTTAT+TGG | - | chr4_3:64583937-64583956 | Msa0655720:intron | 40.0% |
| AAATCAAGTAAAGGGGAGAG+GGG | + | chr4_3:64583998-64584017 | None:intergenic | 40.0% | |
| CAAATCAAGTAAAGGGGAGA+GGG | + | chr4_3:64583999-64584018 | None:intergenic | 40.0% | |
| TCAAATCAAGTAAAGGGGAG+AGG | + | chr4_3:64584000-64584019 | None:intergenic | 40.0% | |
| CTTGCAGAGATGAATGACAA+TGG | - | chr4_3:64584250-64584269 | Msa0655720:CDS | 40.0% | |
| AATCTCACTGACAATGGGAA+TGG | - | chr4_3:64584306-64584325 | Msa0655720:CDS | 40.0% | |
| GTGAACGCAGAAAAGCTTAT+AGG | - | chr4_3:64584480-64584499 | Msa0655720:CDS | 40.0% | |
| TGACAAATGCAAACGGTTTG+TGG | + | chr4_3:64584611-64584630 | None:intergenic | 40.0% | |
| GACTGCTATACAGCTCAAAA+GGG | + | chr4_3:64584656-64584675 | None:intergenic | 40.0% | |
| TGACTGCTATACAGCTCAAA+AGG | + | chr4_3:64584657-64584676 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTGTATAGCAGTC+AGG | - | chr4_3:64584656-64584675 | Msa0655720:five_prime_UTR | 40.0% |
| TCACCAAGTGCATAAGAAAG+AGG | + | chr4_3:64584689-64584708 | None:intergenic | 40.0% | |
| TGGGGTTGACCGATAAGAAA+TGG | - | chr4_3:64578076-64578095 | Msa0655720:three_prime_UTR | 45.0% | |
| AACGGCGATTATTATGCCGA+AGG | + | chr4_3:64578187-64578206 | None:intergenic | 45.0% | |
| CGCCGTTATCGTATTGTTCT+TGG | - | chr4_3:64578200-64578219 | Msa0655720:three_prime_UTR | 45.0% | |
| GTCTGCTACATCACCATTGA+AGG | - | chr4_3:64578228-64578247 | Msa0655720:three_prime_UTR | 45.0% | |
| ! | TGACTTGCAAGTGCCTTCAA+TGG | + | chr4_3:64578244-64578263 | None:intergenic | 45.0% |
| GATCTGACAAAAGCCCATCA+AGG | - | chr4_3:64578375-64578394 | Msa0655720:three_prime_UTR | 45.0% | |
| ATCCATCATCATCACTGTGG+TGG | - | chr4_3:64578420-64578439 | Msa0655720:three_prime_UTR | 45.0% | |
| ACAGTCCAAGTTACTTCCAG+AGG | - | chr4_3:64578494-64578513 | Msa0655720:exon | 45.0% | |
| !! | AAGTGATGATGGTCGTGATG+GGG | + | chr4_3:64578564-64578583 | None:intergenic | 45.0% |
| TGGAGGCAGTAAAGTGATGA+TGG | + | chr4_3:64578575-64578594 | None:intergenic | 45.0% | |
| TACTGCCTCCACTGAACTAT+CGG | - | chr4_3:64578584-64578603 | Msa0655720:CDS | 45.0% | |
| TAAACCCGATAGTTCAGTGG+AGG | + | chr4_3:64578592-64578611 | None:intergenic | 45.0% | |
| TCCACTGAACTATCGGGTTT+AGG | - | chr4_3:64578591-64578610 | Msa0655720:CDS | 45.0% | |
| ACCTAAACCCGATAGTTCAG+TGG | + | chr4_3:64578595-64578614 | None:intergenic | 45.0% | |
| CTGAGGAATCAAATAAGGCC+AGG | + | chr4_3:64578816-64578835 | None:intergenic | 45.0% | |
| AGGTCTTTGGTTGAATGCGT+TGG | - | chr4_3:64579028-64579047 | Msa0655720:intron | 45.0% | |
| GGTCTTTGGTTGAATGCGTT+GGG | - | chr4_3:64579029-64579048 | Msa0655720:intron | 45.0% | |
| GGTTTCCCTTGAACTGAAAC+AGG | + | chr4_3:64579216-64579235 | None:intergenic | 45.0% | |
| !! | CATTGGCTTTATTTGGGGTC+AGG | - | chr4_3:64579256-64579275 | Msa0655720:intron | 45.0% |
| AGTTATGATTGTCGGCATGC+TGG | - | chr4_3:64579371-64579390 | Msa0655720:intron | 45.0% | |
| GCTCCTGCCTGAAAAAGATA+TGG | + | chr4_3:64579498-64579517 | None:intergenic | 45.0% | |
| !! | TTTTCAGGCAGGAGCTATGT+TGG | - | chr4_3:64579503-64579522 | Msa0655720:intron | 45.0% |
| TTTCAGGCAGGAGCTATGTT+GGG | - | chr4_3:64579504-64579523 | Msa0655720:intron | 45.0% | |
| ! | TACCAAAAGCATGCGGTAGT+TGG | + | chr4_3:64579545-64579564 | None:intergenic | 45.0% |
| ! | TGTGTGGGCTTTCTGAGAAT+TGG | + | chr4_3:64579708-64579727 | None:intergenic | 45.0% |
| GTATGGCATGCTAATGAGAC+GGG | - | chr4_3:64580037-64580056 | Msa0655720:intron | 45.0% | |
| ! | CGGGACTAAAAGTTTGGAAC+TGG | - | chr4_3:64580056-64580075 | Msa0655720:intron | 45.0% |
| GGTGAACATTCCCATTCTCA+TGG | - | chr4_3:64580477-64580496 | Msa0655720:intron | 45.0% | |
| TGCATGGTCACCATGAGAAT+GGG | + | chr4_3:64580490-64580509 | None:intergenic | 45.0% | |
| TCTACAGGAATGTCTGTCCT+AGG | - | chr4_3:64580567-64580586 | Msa0655720:intron | 45.0% | |
| GCCCAATTTATGAAGGATGG+TGG | + | chr4_3:64580896-64580915 | None:intergenic | 45.0% | |
| !! | TGTATTCTGGTTCTTGCAGC+TGG | - | chr4_3:64581031-64581050 | Msa0655720:CDS | 45.0% |
| TTCTTGTGGAGAAGCTAGTG+AGG | - | chr4_3:64581068-64581087 | Msa0655720:CDS | 45.0% | |
| TGCTATTGTGGTTATGGTGG+TGG | + | chr4_3:64581141-64581160 | None:intergenic | 45.0% | |
| AGCGAGGATTTAGATTGAGC+TGG | + | chr4_3:64581298-64581317 | None:intergenic | 45.0% | |
| ! | TGAGGATGTCGCTACAGTTT+TGG | - | chr4_3:64581331-64581350 | Msa0655720:intron | 45.0% |
| AGTGGAAGCAATGCAACCAA+AGG | - | chr4_3:64581700-64581719 | Msa0655720:CDS | 45.0% | |
| !! | TTTATGGATCTGTTGGTGGC+TGG | - | chr4_3:64581973-64581992 | Msa0655720:intron | 45.0% |
| GGCACATGAAATTCCTCAAG+AGG | - | chr4_3:64582016-64582035 | Msa0655720:intron | 45.0% | |
| TTAGGAGTGATAAGGTGGGT+TGG | - | chr4_3:64582715-64582734 | Msa0655720:intron | 45.0% | |
| ! | TAGGAGTGATAAGGTGGGTT+GGG | - | chr4_3:64582716-64582735 | Msa0655720:intron | 45.0% |
| GGTTGGGGTGAAAGATCATA+AGG | - | chr4_3:64582732-64582751 | Msa0655720:intron | 45.0% | |
| ! | ATGCTTTGAGCGTAGTGAAC+TGG | - | chr4_3:64583340-64583359 | Msa0655720:intron | 45.0% |
| ! | GTTTTACTCGAGGGAGTTTG+CGG | - | chr4_3:64583924-64583943 | Msa0655720:intron | 45.0% |
| ! | TTTTGGTATAGGCTCTGCTC+TGG | - | chr4_3:64584073-64584092 | Msa0655720:intron | 45.0% |
| TTTGGTATAGGCTCTGCTCT+GGG | - | chr4_3:64584074-64584093 | Msa0655720:intron | 45.0% | |
| AGCATTCCTCACCTCAATCA+GGG | + | chr4_3:64584121-64584140 | None:intergenic | 45.0% | |
| CTCAACCAGCAGATACATCA+CGG | + | chr4_3:64584144-64584163 | None:intergenic | 45.0% | |
| TTACAGGGATTTACTGCAGG+TGG | - | chr4_3:64584199-64584218 | Msa0655720:intron | 45.0% | |
| CGCAGAAAAGCTTATAGGGA+AGG | - | chr4_3:64584485-64584504 | Msa0655720:CDS | 45.0% | |
| GGAAGGTGAACTGAGAGAAA+AGG | - | chr4_3:64584502-64584521 | Msa0655720:CDS | 45.0% | |
| !!! | TTTTTCTTAATAAATTAAAA+TGG | - | chr4_3:64583827-64583846 | Msa0655720:intron | 5.0% |
| ! | CTCCACCACAGTGATGATGA+TGG | + | chr4_3:64578425-64578444 | None:intergenic | 50.0% |
| TCCAGAGGAATTAGCGGAAG+AGG | - | chr4_3:64578509-64578528 | Msa0655720:CDS | 50.0% | |
| TCCTCTTCCGCTAATTCCTC+TGG | + | chr4_3:64578513-64578532 | None:intergenic | 50.0% | |
| ! | GATGGTCGTGATGGGGTAAA+CGG | + | chr4_3:64578557-64578576 | None:intergenic | 50.0% |
| ACTGCCTCCACTGAACTATC+GGG | - | chr4_3:64578585-64578604 | Msa0655720:CDS | 50.0% | |
| TTCAGGCAGGAGCTATGTTG+GGG | - | chr4_3:64579505-64579524 | Msa0655720:intron | 50.0% | |
| ! | CACCAACTACCGCATGCTTT+TGG | - | chr4_3:64579540-64579559 | Msa0655720:intron | 50.0% |
| GTCTGTGTGTGTGTGTGTGT+GGG | + | chr4_3:64579723-64579742 | None:intergenic | 50.0% | |
| AGTCTGTGTGTGTGTGTGTG+TGG | + | chr4_3:64579724-64579743 | None:intergenic | 50.0% | |
| TTTGAAGGAAGCTGAGTGGC+AGG | - | chr4_3:64580130-64580149 | Msa0655720:intron | 50.0% | |
| TTGAAGGAAGCTGAGTGGCA+GGG | - | chr4_3:64580131-64580150 | Msa0655720:intron | 50.0% | |
| CTGCATGGTCACCATGAGAA+TGG | + | chr4_3:64580491-64580510 | None:intergenic | 50.0% | |
| CATCATGGTCATGGTCTGCA+TGG | + | chr4_3:64580506-64580525 | None:intergenic | 50.0% | |
| GGAATGCCAAAAATCCGCCA+TGG | - | chr4_3:64580867-64580886 | Msa0655720:CDS | 50.0% | |
| !!! | TGGTTGCCATGGCGGATTTT+TGG | + | chr4_3:64580876-64580895 | None:intergenic | 50.0% |
| ! | ATGAAGGATGGTGGTTGCCA+TGG | + | chr4_3:64580887-64580906 | None:intergenic | 50.0% |
| GCGCCATGCCCAATTTATGA+AGG | + | chr4_3:64580903-64580922 | None:intergenic | 50.0% | |
| CCAAACACAAGACTGCTTGC+TGG | + | chr4_3:64581802-64581821 | None:intergenic | 50.0% | |
| ! | CCAGCAAGCAGTCTTGTGTT+TGG | - | chr4_3:64581799-64581818 | Msa0655720:intron | 50.0% |
| !! | AGGAGTGATAAGGTGGGTTG+GGG | - | chr4_3:64582717-64582736 | Msa0655720:intron | 50.0% |
| TTGGTATAGGCTCTGCTCTG+GGG | - | chr4_3:64584075-64584094 | Msa0655720:intron | 50.0% | |
| TCAATCAGGGATGACTGTCC+AGG | + | chr4_3:64584108-64584127 | None:intergenic | 50.0% | |
| TGGACAGTCATCCCTGATTG+AGG | - | chr4_3:64584107-64584126 | Msa0655720:intron | 50.0% | |
| AGTCATCCCTGATTGAGGTG+AGG | - | chr4_3:64584112-64584131 | Msa0655720:intron | 50.0% | |
| GAGCATTCCTCACCTCAATC+AGG | + | chr4_3:64584122-64584141 | None:intergenic | 50.0% | |
| ATGCTCCGTGATGTATCTGC+TGG | - | chr4_3:64584136-64584155 | Msa0655720:intron | 50.0% | |
| ATGGGAATGGCTGTTGCACT+TGG | - | chr4_3:64584319-64584338 | Msa0655720:CDS | 50.0% | |
| TCAGGCAGGAGCTATGTTGG+GGG | - | chr4_3:64579506-64579525 | Msa0655720:intron | 55.0% | |
| ! | AAGGATGGTGGTTGCCATGG+CGG | + | chr4_3:64580884-64580903 | None:intergenic | 55.0% |
| AATTGGGCATGGCGCCATCA+TGG | - | chr4_3:64580908-64580927 | Msa0655720:CDS | 55.0% | |
| ACTCAGGAGGAGCTAACTCG+TGG | - | chr4_3:64581104-64581123 | Msa0655720:CDS | 55.0% | |
| CTCAGGAGGAGCTAACTCGT+GGG | - | chr4_3:64581105-64581124 | Msa0655720:CDS | 55.0% | |
| TCAGGAGGAGCTAACTCGTG+GGG | - | chr4_3:64581106-64581125 | Msa0655720:CDS | 55.0% | |
| ! | AGACTGCTTGCTGGTCTAGC+TGG | + | chr4_3:64581793-64581812 | None:intergenic | 55.0% |
| TCTGCACTTGTGGCACTTGC+AGG | - | chr4_3:64583568-64583587 | Msa0655720:intron | 55.0% | |
| CAAGTAAAGGGGAGAGGGGA+TGG | + | chr4_3:64583994-64584013 | None:intergenic | 55.0% | |
| TGGTATAGGCTCTGCTCTGG+GGG | - | chr4_3:64584076-64584095 | Msa0655720:intron | 55.0% | |
| CTCTGCAAGCACTCCTGCAA+TGG | + | chr4_3:64584239-64584258 | None:intergenic | 55.0% | |
| CAGGAGGAGCTAACTCGTGG+GGG | - | chr4_3:64581107-64581126 | Msa0655720:CDS | 60.0% | |
| ! | GGCACTTGCAGGCACTGCAT+TGG | - | chr4_3:64583579-64583598 | Msa0655720:intron | 60.0% |
| !! | CTGCTCTGGGGGAAAGATCC+TGG | - | chr4_3:64584087-64584106 | Msa0655720:intron | 60.0% |
| TGGGCATGGCGCCATCATGG+CGG | - | chr4_3:64580911-64580930 | Msa0655720:CDS | 65.0% | |
| GGAGCTAACTCGTGGGGGCA+TGG | - | chr4_3:64581112-64581131 | Msa0655720:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 64578041 | 64584819 | 64578041 | ID=Msa0655720;Name=Msa0655720 |
| chr4_3 | mRNA | 64578041 | 64584819 | 64578041 | ID=Msa0655720-mRNA-1;Parent=Msa0655720;Name=Msa0655720-mRNA-1;_AED=0.00;_eAED=0.00;_QI=241|1|1|1|1|1|11|459|490 |
| chr4_3 | exon | 64578041 | 64578655 | 64578041 | ID=Msa0655720-mRNA-1:exon:18281;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64578732 | 64578776 | 64578732 | ID=Msa0655720-mRNA-1:exon:18280;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64579260 | 64579361 | 64579260 | ID=Msa0655720-mRNA-1:exon:18279;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64580823 | 64580930 | 64580823 | ID=Msa0655720-mRNA-1:exon:18278;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64581011 | 64581163 | 64581011 | ID=Msa0655720-mRNA-1:exon:18277;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64581536 | 64581810 | 64581536 | ID=Msa0655720-mRNA-1:exon:18276;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64582272 | 64582388 | 64582272 | ID=Msa0655720-mRNA-1:exon:18275;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64583299 | 64583350 | 64583299 | ID=Msa0655720-mRNA-1:exon:18274;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64583588 | 64583637 | 64583588 | ID=Msa0655720-mRNA-1:exon:18273;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64583747 | 64583830 | 64583747 | ID=Msa0655720-mRNA-1:exon:18272;Parent=Msa0655720-mRNA-1 |
| chr4_3 | exon | 64584248 | 64584819 | 64584248 | ID=Msa0655720-mRNA-1:exon:18271;Parent=Msa0655720-mRNA-1 |
| chr4_3 | five_prime_UTR | 64584579 | 64584819 | 64584579 | ID=Msa0655720-mRNA-1:five_prime_utr;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64584248 | 64584578 | 64584248 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64583747 | 64583830 | 64583747 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64583588 | 64583637 | 64583588 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64583299 | 64583350 | 64583299 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64582272 | 64582388 | 64582272 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64581536 | 64581810 | 64581536 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64581011 | 64581163 | 64581011 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64580823 | 64580930 | 64580823 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64579260 | 64579361 | 64579260 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64578732 | 64578776 | 64578732 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | CDS | 64578500 | 64578655 | 64578500 | ID=Msa0655720-mRNA-1:cds;Parent=Msa0655720-mRNA-1 |
| chr4_3 | three_prime_UTR | 64578041 | 64578499 | 64578041 | ID=Msa0655720-mRNA-1:three_prime_utr;Parent=Msa0655720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
