Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562370 | XP_039685158.1 | 93.852 | 488 | 27 | 3 | 1 | 487 | 1 | 486 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562370 | sp|Q9M647|IAR1_ARATH | 64.354 | 418 | 126 | 9 | 73 | 487 | 72 | 469 | 5.33e-165 | 477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562370 | A0A396GMG8 | 93.852 | 488 | 27 | 3 | 1 | 487 | 1 | 486 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0172070 | Msa0562370 | 0.800304 | 1.534458e-48 | -8.615850e-47 |
| Msa0358310 | Msa0562370 | 0.815306 | 9.892672e-52 | -8.615850e-47 |
| Msa0562370 | Msa0655720 | 0.828680 | 7.858509e-55 | -8.615850e-47 |
| Msa0562370 | Msa1302830 | 0.803153 | 3.993037e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562370 | MtrunA17_Chr8g0375561 | 93.852 | 488 | 27 | 3 | 1 | 487 | 1 | 486 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562370 | AT1G68100.1 | 64.354 | 418 | 126 | 9 | 73 | 487 | 72 | 469 | 5.42e-166 | 477 |
| Msa0562370 | AT1G68100.2 | 63.760 | 367 | 110 | 9 | 73 | 436 | 72 | 418 | 6.04e-138 | 404 |
Find 139 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAGTGCATTCATTCTTTA+TGG | 0.128139 | 4_1:-62188388 | Msa0562370:CDS |
| TGCATACAGGTTGGTGATTT+TGG | 0.131631 | 4_1:-62186868 | Msa0562370:intron |
| GTTGATTCATTGGCTTTATT+TGG | 0.140275 | 4_1:-62191104 | Msa0562370:CDS |
| TACACAGTTTACTGTGTTAA+TGG | 0.164866 | 4_1:+62185785 | None:intergenic |
| TGAATAAAATGTTCTTTCTT+AGG | 0.196134 | 4_1:-62186000 | Msa0562370:three_prime_UTR |
| TTGATTCATTGGCTTTATTT+GGG | 0.206144 | 4_1:-62191103 | Msa0562370:CDS |
| ATATTTGACATTTAGGTCTT+TGG | 0.237351 | 4_1:-62191339 | Msa0562370:intron |
| CTTACACTTAGTGTAATAAT+TGG | 0.274742 | 4_1:+62185951 | None:intergenic |
| TCTGCACTTGTGGCACTTGC+AGG | 0.290617 | 4_1:-62186790 | Msa0562370:CDS |
| GAAAAGGACAAAGACAAATA+AGG | 0.319250 | 4_1:+62185605 | None:intergenic |
| CATGACCATGATGATAATTC+TGG | 0.325466 | 4_1:-62189832 | Msa0562370:CDS |
| GTGAACGCAGAAAAGCTTAT+AGG | 0.338557 | 4_1:-62185878 | Msa0562370:three_prime_UTR |
| AAAGGCTGTTGTTGATTCAT+TGG | 0.343628 | 4_1:-62191114 | Msa0562370:CDS |
| CACCAACTACCGCATGCTTT+TGG | 0.343649 | 4_1:-62190795 | Msa0562370:intron |
| TTTCAGGCAGGAGCTATGTT+GGG | 0.345216 | 4_1:-62190831 | Msa0562370:intron |
| GAATCAACAACAGCCTTTGA+TGG | 0.351301 | 4_1:+62191119 | None:intergenic |
| GTTTACTGTGTTAATGGTTA+AGG | 0.358508 | 4_1:+62185791 | None:intergenic |
| AAATCACCGATTGTGTTTGA+TGG | 0.387373 | 4_1:-62185644 | Msa0562370:three_prime_UTR |
| TTTATATACATCGCCATTGC+AGG | 0.389892 | 4_1:-62186135 | Msa0562370:CDS |
| TTCACTGATGGAATTGCATT+AGG | 0.390135 | 4_1:-62188409 | Msa0562370:CDS |
| AATTGTACTCTTTCTTCTTG+TGG | 0.396907 | 4_1:-62189291 | Msa0562370:CDS |
| TCCTATGTTAGAAGAAGAAA+TGG | 0.400423 | 4_1:-62192193 | Msa0562370:five_prime_UTR |
| TTTGGTATAGGCTCTGCTCT+GGG | 0.400886 | 4_1:-62186284 | Msa0562370:intron |
| TCCACTGAACTATCGGGTTT+AGG | 0.402223 | 4_1:-62191763 | Msa0562370:intron |
| TGGGGTTGACCGATAAGAAA+TGG | 0.403068 | 4_1:-62192266 | Msa0562370:five_prime_UTR |
| TCCTCTTCCGCTAATTCCTC+TGG | 0.405894 | 4_1:+62191844 | None:intergenic |
| TACTGCCTCCACTGAACTAT+CGG | 0.407152 | 4_1:-62191770 | Msa0562370:CDS |
| ATCATTCTGACTACTACCTT+TGG | 0.410847 | 4_1:+62188629 | None:intergenic |
| GAGCATTCCTCACCTCAATC+AGG | 0.413368 | 4_1:+62186239 | None:intergenic |
| TGACTGCTATACAGCTCAAA+AGG | 0.416259 | 4_1:+62185704 | None:intergenic |
| TGACAAATGCAAACGGTTTG+TGG | 0.422243 | 4_1:+62185750 | None:intergenic |
| TTTATGGATCTGTTGGTGGC+TGG | 0.428280 | 4_1:-62188372 | Msa0562370:CDS |
| GAGGAAGATATGAAACTCTA+TGG | 0.429877 | 4_1:-62191826 | Msa0562370:CDS |
| AAGTTGAAGAACAAAGCTTT+TGG | 0.434106 | 4_1:+62186817 | None:intergenic |
| AAATTACAGGCAGAATAATC+AGG | 0.434136 | 4_1:+62191266 | None:intergenic |
| TTTCCTCTTTCTTATGCACT+TGG | 0.435803 | 4_1:-62185675 | Msa0562370:three_prime_UTR |
| TTCATTCTTTATGGATCTGT+TGG | 0.436706 | 4_1:-62188379 | Msa0562370:CDS |
| TGCTATTGTGGTTATGGTGG+TGG | 0.438617 | 4_1:+62189207 | None:intergenic |
| TCTACAGGAATGTCTGTCCT+AGG | 0.440185 | 4_1:-62189778 | Msa0562370:intron |
| CCAAACACAAGACTGCTTGC+TGG | 0.440776 | 4_1:+62188546 | None:intergenic |
| CCAGCAAGCAGTCTTGTGTT+TGG | 0.441867 | 4_1:-62188546 | Msa0562370:CDS |
| TGAACGCAGAAAAGCTTATA+GGG | 0.447907 | 4_1:-62185877 | Msa0562370:three_prime_UTR |
| ATTCTTTATGGATCTGTTGG+TGG | 0.455219 | 4_1:-62188376 | Msa0562370:CDS |
| GTCTGCTACATCACCATTGA+AGG | 0.456281 | 4_1:-62192117 | Msa0562370:five_prime_UTR |
| TCTTTAGCTGATCTTTCTAC+AGG | 0.456421 | 4_1:-62189793 | Msa0562370:CDS |
| CTGTTCATTTCTAGTGAGCA+TGG | 0.462325 | 4_1:-62191302 | Msa0562370:CDS |
| TTCAGGCAGGAGCTATGTTG+GGG | 0.468392 | 4_1:-62190830 | Msa0562370:intron |
| GATATGAAACTCTATGGCTT+CGG | 0.473249 | 4_1:-62191820 | Msa0562370:CDS |
| GGTCTTTGGTTGAATGCGTT+GGG | 0.474628 | 4_1:-62191325 | Msa0562370:CDS |
| TCAAATAATCTCACTGACAA+TGG | 0.476796 | 4_1:-62186058 | Msa0562370:CDS |
| CAGAATAATCAGGCAAATCA+AGG | 0.478928 | 4_1:+62191276 | None:intergenic |
| AGGTCTTTGGTTGAATGCGT+TGG | 0.479620 | 4_1:-62191326 | Msa0562370:CDS |
| CAAATAATCTCACTGACAAT+GGG | 0.483818 | 4_1:-62186057 | Msa0562370:CDS |
| ACTGCCTCCACTGAACTATC+GGG | 0.484575 | 4_1:-62191769 | Msa0562370:CDS |
| ATCTAAATCCTCGCTTAGAA+AGG | 0.488010 | 4_1:-62189042 | Msa0562370:intron |
| TGGTATAGGCTCTGCTCTGG+GGG | 0.489474 | 4_1:-62186282 | Msa0562370:intron |
| TGCATGGTCACCATGAGAAT+GGG | 0.491097 | 4_1:+62189858 | None:intergenic |
| AGCGAGGATTTAGATTGAGC+TGG | 0.491576 | 4_1:+62189050 | None:intergenic |
| TCCATTTCTTCTTCTAACAT+AGG | 0.492092 | 4_1:+62192192 | None:intergenic |
| AGACTGCTTGCTGGTCTAGC+TGG | 0.494277 | 4_1:+62188555 | None:intergenic |
| TAGAATGAGAGTGACCTTGA+TGG | 0.495202 | 4_1:+62191965 | None:intergenic |
| GGAAGGTGAACTGAGAGAAA+AGG | 0.495255 | 4_1:-62185856 | Msa0562370:three_prime_UTR |
| TTGCAGCATAATTTCACTGA+TGG | 0.495442 | 4_1:-62188421 | Msa0562370:intron |
| TCCAGAGGAATTAGCGGAAG+AGG | 0.497836 | 4_1:-62191845 | Msa0562370:CDS |
| GAAATGGATGTGATAACCTT+CGG | 0.499822 | 4_1:-62192177 | Msa0562370:five_prime_UTR |
| TACCAAAAGCATGCGGTAGT+TGG | 0.508827 | 4_1:+62190793 | None:intergenic |
| CTGCATGGTCACCATGAGAA+TGG | 0.509145 | 4_1:+62189857 | None:intergenic |
| GGCACTTGCAGGCACTGCAT+TGG | 0.512803 | 4_1:-62186779 | Msa0562370:intron |
| TCAATCAGGGATGACTGTCC+AGG | 0.514548 | 4_1:+62186253 | None:intergenic |
| TAGATCAATACAGAATGGTC+AGG | 0.515623 | 4_1:-62185832 | Msa0562370:three_prime_UTR |
| TAATTCCTCTGGAAGTAACT+TGG | 0.516457 | 4_1:+62191855 | None:intergenic |
| ATTCACCTGTTTCAGTTCAA+GGG | 0.517071 | 4_1:-62191145 | Msa0562370:intron |
| CAGTGATGATGATGGATGTT+GGG | 0.518606 | 4_1:+62191940 | None:intergenic |
| TGAAGTTGCAAGCCACCGAC+TGG | 0.520483 | 4_1:-62192334 | None:intergenic |
| CTCTGCAAGCACTCCTGCAA+TGG | 0.521107 | 4_1:+62186122 | None:intergenic |
| CAATATCCATCAAACACAAT+CGG | 0.523236 | 4_1:+62185638 | None:intergenic |
| TTGGTATAGGCTCTGCTCTG+GGG | 0.531133 | 4_1:-62186283 | Msa0562370:intron |
| TCACCAAGTGCATAAGAAAG+AGG | 0.531378 | 4_1:+62185672 | None:intergenic |
| AGAATGAGAGTGACCTTGAT+GGG | 0.535392 | 4_1:+62191966 | None:intergenic |
| CTACTACTACTCAATGCCAT+TGG | 0.537984 | 4_1:+62192066 | None:intergenic |
| CATAATCTGACAAATGCAAA+CGG | 0.538638 | 4_1:+62185743 | None:intergenic |
| CAGAATTATCATCATGGTCA+TGG | 0.538988 | 4_1:+62189833 | None:intergenic |
| TGATTCATTGGCTTTATTTG+GGG | 0.541640 | 4_1:-62191102 | Msa0562370:intron |
| TACTAAGAACAATACGATAA+CGG | 0.546163 | 4_1:+62192143 | None:intergenic |
| TGGAGGCAGTAAAGTGATGA+TGG | 0.551619 | 4_1:+62191782 | None:intergenic |
| CGCAGAAAAGCTTATAGGGA+AGG | 0.559672 | 4_1:-62185873 | Msa0562370:three_prime_UTR |
| ATTCTTGTGTTGCAGAGAAG+TGG | 0.560445 | 4_1:-62188663 | Msa0562370:intron |
| AAGGATAGATCAATACAGAA+TGG | 0.566130 | 4_1:-62185837 | Msa0562370:three_prime_UTR |
| TGGACAGTCATCCCTGATTG+AGG | 0.566660 | 4_1:-62186251 | Msa0562370:intron |
| GTTACTTCCAGAGGAATTAG+CGG | 0.568339 | 4_1:-62191851 | Msa0562370:CDS |
| CATCATGGTCATGGTCTGCA+TGG | 0.569507 | 4_1:+62189842 | None:intergenic |
| CATGTCCAGAATTATCATCA+TGG | 0.571839 | 4_1:+62189827 | None:intergenic |
| GACTGCTATACAGCTCAAAA+GGG | 0.571881 | 4_1:+62185705 | None:intergenic |
| TAAAGTGATGATGGTCGTGA+TGG | 0.572558 | 4_1:+62191791 | None:intergenic |
| TGAAGATTTGACATTATCAG+TGG | 0.572617 | 4_1:+62188590 | None:intergenic |
| GGCACATGAAATTCCTCAAG+AGG | 0.573109 | 4_1:-62188329 | Msa0562370:intron |
| TTACAGGGATTTACTGCAGG+TGG | 0.573701 | 4_1:-62186159 | Msa0562370:intron |
| TCTTGCTATTGTGGTTATGG+TGG | 0.575168 | 4_1:+62189204 | None:intergenic |
| TCAGGCAGGAGCTATGTTGG+GGG | 0.576089 | 4_1:-62190829 | Msa0562370:intron |
| GGATGAATTATAACCTCTTG+AGG | 0.577902 | 4_1:+62188316 | None:intergenic |
| AATCTCACTGACAATGGGAA+TGG | 0.580876 | 4_1:-62186052 | Msa0562370:CDS |
| ATGGGAATGGCTGTTGCACT+TGG | 0.581173 | 4_1:-62186039 | Msa0562370:CDS |
| AGTTCAAGGGAAACCATCAA+AGG | 0.587721 | 4_1:-62191132 | Msa0562370:CDS |
| CATGATGATAATTCTGGACA+TGG | 0.588922 | 4_1:-62189826 | Msa0562370:CDS |
| ATCCATCATCATCACTGTGG+TGG | 0.594782 | 4_1:-62191934 | Msa0562370:CDS |
| CTCCACCACAGTGATGATGA+TGG | 0.595571 | 4_1:+62191932 | None:intergenic |
| AGCATTCCTCACCTCAATCA+GGG | 0.600342 | 4_1:+62186240 | None:intergenic |
| TTGCAGAGATGAATGACAAT+GGG | 0.600430 | 4_1:-62186107 | Msa0562370:CDS |
| CTCAGGAGGAGCTAACTCGT+GGG | 0.603723 | 4_1:-62189240 | Msa0562370:CDS |
| TTATTGAGAGTTCCAGTCGG+TGG | 0.604630 | 4_1:+62192322 | None:intergenic |
| TGACTTGCAAGTGCCTTCAA+TGG | 0.606498 | 4_1:+62192104 | None:intergenic |
| AAAGTGATGATGGTCGTGAT+GGG | 0.607012 | 4_1:+62191792 | None:intergenic |
| ACTCAGGAGGAGCTAACTCG+TGG | 0.607499 | 4_1:-62189241 | Msa0562370:CDS |
| TTCTTGTGGAGAAGCTAGTG+AGG | 0.607811 | 4_1:-62189277 | Msa0562370:CDS |
| TCAAGTATCACATGACACAT+TGG | 0.608400 | 4_1:-62189084 | Msa0562370:CDS |
| ACAGTGATGATGATGGATGT+TGG | 0.608711 | 4_1:+62191939 | None:intergenic |
| GATCTGACAAAAGCCCATCA+AGG | 0.609905 | 4_1:-62191979 | Msa0562370:CDS |
| AGTATCACATGACACATTGG+AGG | 0.613160 | 4_1:-62189081 | Msa0562370:CDS |
| AACGGCGATTATTATGCCGA+AGG | 0.619661 | 4_1:+62192161 | None:intergenic |
| CATGAGCATGATCATGATCA+TGG | 0.623435 | 4_1:+62191896 | None:intergenic |
| ACACTCTTAATTCAGTCCAA+TGG | 0.623548 | 4_1:-62192082 | Msa0562370:exon |
| CATTTATTGAGAGTTCCAGT+CGG | 0.623644 | 4_1:+62192319 | None:intergenic |
| AGGTATGTTGAAGAAAACTC+AGG | 0.625019 | 4_1:-62189257 | Msa0562370:CDS |
| GTATCACATGACACATTGGA+GGG | 0.631044 | 4_1:-62189080 | Msa0562370:CDS |
| GGTGAACATTCCCATTCTCA+TGG | 0.633552 | 4_1:-62189868 | Msa0562370:CDS |
| ACCTAAACCCGATAGTTCAG+TGG | 0.636344 | 4_1:+62191762 | None:intergenic |
| TCAGGAGGAGCTAACTCGTG+GGG | 0.637572 | 4_1:-62189239 | Msa0562370:CDS |
| AAAAGAGTTTGGTAGATGAG+GGG | 0.647576 | 4_1:-62189118 | Msa0562370:CDS |
| CTTGCAGAGATGAATGACAA+TGG | 0.648537 | 4_1:-62186108 | Msa0562370:CDS |
| ACAGTCCAAGTTACTTCCAG+AGG | 0.648851 | 4_1:-62191860 | Msa0562370:CDS |
| AGTGGAAGCAATGCAACCAA+AGG | 0.649556 | 4_1:-62188645 | Msa0562370:CDS |
| CAGGAGGAGCTAACTCGTGG+GGG | 0.677778 | 4_1:-62189238 | Msa0562370:CDS |
| TAAACCCGATAGTTCAGTGG+AGG | 0.679883 | 4_1:+62191765 | None:intergenic |
| AAGTGATGATGGTCGTGATG+GGG | 0.680703 | 4_1:+62191793 | None:intergenic |
| ACTTGGACTGTTGATGAACA+TGG | 0.684814 | 4_1:+62191872 | None:intergenic |
| CTGTGACTGATTGTTGACAT+CGG | 0.696774 | 4_1:+62189157 | None:intergenic |
| TATGTTGAAGAAAACTCAGG+AGG | 0.703074 | 4_1:-62189254 | Msa0562370:CDS |
| CATATCATACCAAAAGCATG+CGG | 0.741356 | 4_1:+62190786 | None:intergenic |
| AACATCCATCATCATCACTG+TGG | 0.759172 | 4_1:-62191937 | Msa0562370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTTTTTTTTTTTTTTTG+GGG | - | chr4_1:62185606-62185625 | Msa0562370:three_prime_UTR | 10.0% |
| !!! | AGTTTTTTATATTTTGAAAT+TGG | - | chr4_1:62188513-62188532 | Msa0562370:intron | 10.0% |
| !!! | ATGTTTTATAAAATGTATTT+AGG | - | chr4_1:62190073-62190092 | Msa0562370:intron | 10.0% |
| !!! | AATATATACACATTTAATTT+TGG | + | chr4_1:62191209-62191228 | None:intergenic | 10.0% |
| !!! | TTTATTAAATTTCTTCTTTT+TGG | - | chr4_1:62191588-62191607 | Msa0562370:intron | 10.0% |
| !!! | TTTTAATTTAGTAATTTCAC+TGG | - | chr4_1:62187200-62187219 | Msa0562370:intron | 15.0% |
| !! | AAAGTAAAAATACTGAAAAA+AGG | + | chr4_1:62187657-62187676 | None:intergenic | 15.0% |
| !! | AAATACTATTTGACAAAAAA+GGG | + | chr4_1:62187937-62187956 | None:intergenic | 15.0% |
| !! | ATACTTATATGTTGAATTAT+TGG | - | chr4_1:62188189-62188208 | Msa0562370:intron | 15.0% |
| !! | TAATACAAAAAAAAAGAGTT+TGG | - | chr4_1:62188761-62188780 | Msa0562370:intron | 15.0% |
| !! | GTATAACCATATAAAAAATT+AGG | + | chr4_1:62189760-62189779 | None:intergenic | 15.0% |
| !!! | TTACTTTTTAATCCTTATAA+TGG | - | chr4_1:62190132-62190151 | Msa0562370:intron | 15.0% |
| !! | TTAATAAATCATTCTATGTT+TGG | + | chr4_1:62191576-62191595 | None:intergenic | 15.0% |
| !! | TATGTTTATTTCAACCATTT+CGG | - | chr4_1:62186204-62186223 | Msa0562370:intron | 20.0% |
| !! | TTGTTTCATATTTGACATTT+AGG | - | chr4_1:62186544-62186563 | Msa0562370:intron | 20.0% |
| !!! | TGCAAAATTTTGATTAATCT+GGG | - | chr4_1:62186720-62186739 | Msa0562370:intron | 20.0% |
| !! | AAATACAAGAAAAGTAACAT+AGG | + | chr4_1:62187460-62187479 | None:intergenic | 20.0% |
| !!! | TTCAGTATTTTTACTTTTGA+AGG | - | chr4_1:62187660-62187679 | Msa0562370:intron | 20.0% |
| !!! | ATTTTTTCCATCAATTAAGA+TGG | - | chr4_1:62187735-62187754 | Msa0562370:intron | 20.0% |
| !!! | TTTTTTCCATCAATTAAGAT+GGG | - | chr4_1:62187736-62187755 | Msa0562370:intron | 20.0% |
| !! | AATACTATTTGACAAAAAAG+GGG | + | chr4_1:62187936-62187955 | None:intergenic | 20.0% |
| !! | GAAATACTATTTGACAAAAA+AGG | + | chr4_1:62187938-62187957 | None:intergenic | 20.0% |
| !! | ATTCAACATATAAGTATACA+AGG | + | chr4_1:62188186-62188205 | None:intergenic | 20.0% |
| !! | TGAAATTGGTATTATTTAGA+TGG | - | chr4_1:62188527-62188546 | Msa0562370:CDS | 20.0% |
| !! | GAAATTGGTATTATTTAGAT+GGG | - | chr4_1:62188528-62188547 | Msa0562370:CDS | 20.0% |
| !! | AAATTGGTATTATTTAGATG+GGG | - | chr4_1:62188529-62188548 | Msa0562370:CDS | 20.0% |
| !!! | ACTCTTTTTTTTTGTATTAC+TGG | + | chr4_1:62188760-62188779 | None:intergenic | 20.0% |
| !! | TATGTTATGCCTAATTAAAT+GGG | + | chr4_1:62189656-62189675 | None:intergenic | 20.0% |
| !!! | TTGTGTCCTAATTTTTTATA+TGG | - | chr4_1:62189751-62189770 | Msa0562370:intron | 20.0% |
| !!! | AAGAAGTAATCATTTTATCA+AGG | + | chr4_1:62189808-62189827 | None:intergenic | 20.0% |
| !!! | GATAAAATGATTACTTCTTT+TGG | - | chr4_1:62189809-62189828 | Msa0562370:CDS | 20.0% |
| !! | ATCTTAGCAACTAAAAAAAT+GGG | + | chr4_1:62190033-62190052 | None:intergenic | 20.0% |
| !! | AATCTTAGCAACTAAAAAAA+TGG | + | chr4_1:62190034-62190053 | None:intergenic | 20.0% |
| !! | TAAAAAAAACCTTTATGCTT+AGG | - | chr4_1:62190242-62190261 | Msa0562370:intron | 20.0% |
| !! | ACAAATAATAAAGTACGAAA+AGG | + | chr4_1:62190843-62190862 | None:intergenic | 20.0% |
| !!! | AAATTTCTTCTTTTTGGTAT+AGG | - | chr4_1:62191594-62191613 | Msa0562370:intron | 20.0% |
| !!! | ACATTTTATTCATTCTACAA+GGG | + | chr4_1:62191882-62191901 | None:intergenic | 20.0% |
| !!! | AACATTTTATTCATTCTACA+AGG | + | chr4_1:62191883-62191902 | None:intergenic | 20.0% |
| !! | TGAATAAAATGTTCTTTCTT+AGG | - | chr4_1:62191890-62191909 | Msa0562370:CDS | 20.0% |
| !! | TGAATGAAAACAAAAAGAAA+AGG | + | chr4_1:62192304-62192323 | None:intergenic | 20.0% |
| !!! | TGCTTTTTTCCATTTCTTAT+CGG | + | chr4_1:62185636-62185655 | None:intergenic | 25.0% |
| ! | TACTAAGAACAATACGATAA+CGG | + | chr4_1:62185750-62185769 | None:intergenic | 25.0% |
| ! | GGTTGAAATAAACATAAAAG+AGG | + | chr4_1:62186200-62186219 | None:intergenic | 25.0% |
| !!! | TTTTGGGGTTTATCAAATTT+AGG | - | chr4_1:62186257-62186276 | Msa0562370:CDS | 25.0% |
| !! | AGGAATTTTGCCAAAATAAA+CGG | - | chr4_1:62186277-62186296 | Msa0562370:CDS | 25.0% |
| ! | TCCTCAGTTTGTAATTATTA+TGG | - | chr4_1:62186365-62186384 | Msa0562370:intron | 25.0% |
| ! | ACCATAATAATTACAAACTG+AGG | + | chr4_1:62186369-62186388 | None:intergenic | 25.0% |
| ! | ATATTTGACATTTAGGTCTT+TGG | - | chr4_1:62186551-62186570 | Msa0562370:intron | 25.0% |
| !! | ATTATTCTGCCTGTAATTTT+TGG | - | chr4_1:62186628-62186647 | Msa0562370:intron | 25.0% |
| !! | TAATCAAAATTTTGCACAGT+AGG | + | chr4_1:62186716-62186735 | None:intergenic | 25.0% |
| !!! | GTGCAAAATTTTGATTAATC+TGG | - | chr4_1:62186719-62186738 | Msa0562370:intron | 25.0% |
| !!! | TTGATTCATTGGCTTTATTT+GGG | - | chr4_1:62186787-62186806 | Msa0562370:CDS | 25.0% |
| ! | AAGATAGTGAAACTAAAGAA+AGG | + | chr4_1:62186831-62186850 | None:intergenic | 25.0% |
| ! | TGTTTGTAAGTTATGATTGT+CGG | - | chr4_1:62186918-62186937 | Msa0562370:intron | 25.0% |
| !! | TCATTTACCATATCTTTTTC+AGG | - | chr4_1:62187043-62187062 | Msa0562370:intron | 25.0% |
| ! | GAAACAAAATCAATCAACAA+AGG | + | chr4_1:62187160-62187179 | None:intergenic | 25.0% |
| !!! | GTTGATTGATTTTGTTTCAA+TGG | - | chr4_1:62187162-62187181 | Msa0562370:intron | 25.0% |
| !!! | ATTGATTTTGTTTCAATGGA+AGG | - | chr4_1:62187166-62187185 | Msa0562370:intron | 25.0% |
| ! | AAAAATACTGAAAAAAGGTC+AGG | + | chr4_1:62187652-62187671 | None:intergenic | 25.0% |
| ! | AATAAAAACAGAGAAGAATG+TGG | + | chr4_1:62187713-62187732 | None:intergenic | 25.0% |
| !!! | TTTGGGATAATTGATTCTTT+TGG | - | chr4_1:62187763-62187782 | Msa0562370:intron | 25.0% |
| !! | TGGTATGTTTTACTTGTAAT+AGG | - | chr4_1:62187783-62187802 | Msa0562370:intron | 25.0% |
| ! | GCTGCAATCTATAAAATAAA+AGG | + | chr4_1:62187889-62187908 | None:intergenic | 25.0% |
| ! | ATATGATTCTCTTTAACTGT+AGG | - | chr4_1:62187995-62188014 | Msa0562370:intron | 25.0% |
| ! | CAATTAATTAGTGGAAGAAA+AGG | + | chr4_1:62188218-62188237 | None:intergenic | 25.0% |
| ! | TATTCCATGCAATTAATTAG+TGG | + | chr4_1:62188227-62188246 | None:intergenic | 25.0% |
| !!! | ATAATTTTAGCATCAGAGAA+AGG | - | chr4_1:62188280-62188299 | Msa0562370:intron | 25.0% |
| ! | AATACATAGTAAGAATGAGA+GGG | + | chr4_1:62188562-62188581 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTCTTGCTATTG+TGG | + | chr4_1:62188698-62188717 | None:intergenic | 25.0% |
| ! | AACATCAGAAATTACAACAA+TGG | + | chr4_1:62188966-62188985 | None:intergenic | 25.0% |
| ! | TTGTTGTAATTTCTGATGTT+TGG | - | chr4_1:62188966-62188985 | Msa0562370:intron | 25.0% |
| ! | GACAGTTATTAAAGACAAAT+AGG | - | chr4_1:62189000-62189019 | Msa0562370:intron | 25.0% |
| ! | AAAACTTGAATAGCCATAAT+AGG | - | chr4_1:62189029-62189048 | Msa0562370:intron | 25.0% |
| ! | ATATTTGTAGTACATTACAG+AGG | - | chr4_1:62189104-62189123 | Msa0562370:CDS | 25.0% |
| ! | AGGTAAAATGTTACGAATAT+TGG | + | chr4_1:62189627-62189646 | None:intergenic | 25.0% |
| ! | CTATGTTATGCCTAATTAAA+TGG | + | chr4_1:62189657-62189676 | None:intergenic | 25.0% |
| !!! | TATTTTATTCCCCTAGTTTT+TGG | - | chr4_1:62189974-62189993 | Msa0562370:intron | 25.0% |
| ! | TGTATTTAGGCTATAATTTC+TGG | - | chr4_1:62190086-62190105 | Msa0562370:intron | 25.0% |
| !! | TAATGATTGATCTTTTATGC+AGG | + | chr4_1:62190194-62190213 | None:intergenic | 25.0% |
| ! | AAAGCAAGATACTAAATACA+TGG | + | chr4_1:62190454-62190473 | None:intergenic | 25.0% |
| !! | GGGAAGTATAAATCAATATT+AGG | - | chr4_1:62190571-62190590 | Msa0562370:intron | 25.0% |
| !!! | TTTTTTTTCTCTCTTCCTAT+TGG | + | chr4_1:62190721-62190740 | None:intergenic | 25.0% |
| ! | ATAGGAAGAGAGAAAAAAAA+AGG | - | chr4_1:62190721-62190740 | Msa0562370:intron | 25.0% |
| ! | ATGATATTTGTACAACCATT+TGG | + | chr4_1:62190614-62190633 | None:intergenic | 25.0% |
| ! | GTTGTACAAATATCATTACT+CGG | - | chr4_1:62190757-62190776 | Msa0562370:intron | 25.0% |
| !!! | CATCTGTTTCAGATATTTTT+TGG | - | chr4_1:62190964-62190983 | Msa0562370:intron | 25.0% |
| !!! | TTTGGTATTTTGATAAGATC+TGG | - | chr4_1:62191040-62191059 | Msa0562370:intron | 25.0% |
| ! | AGTATTGTCTTCATTCAATA+GGG | - | chr4_1:62191136-62191155 | Msa0562370:intron | 25.0% |
| !! | TGTTCACAAATTTTGTAGTT+AGG | - | chr4_1:62191242-62191261 | Msa0562370:intron | 25.0% |
| ! | CATTCACAATATGATTCATA+AGG | + | chr4_1:62191278-62191297 | None:intergenic | 25.0% |
| !!! | TTAAAAAGTTGTTTTACTCG+AGG | - | chr4_1:62191446-62191465 | Msa0562370:intron | 25.0% |
| !!! | TAAAAAGTTGTTTTACTCGA+GGG | - | chr4_1:62191447-62191466 | Msa0562370:intron | 25.0% |
| ! | TTGGACATACTAATAATGAA+GGG | + | chr4_1:62191557-62191576 | None:intergenic | 25.0% |
| ! | TTTGGACATACTAATAATGA+AGG | + | chr4_1:62191558-62191577 | None:intergenic | 25.0% |
| !!! | TGACTATCTCTTATTTTACA+GGG | - | chr4_1:62191716-62191735 | Msa0562370:intron | 25.0% |
| ! | CTTACACTTAGTGTAATAAT+TGG | + | chr4_1:62191942-62191961 | None:intergenic | 25.0% |
| TCCTATGTTAGAAGAAGAAA+TGG | - | chr4_1:62185697-62185716 | Msa0562370:three_prime_UTR | 30.0% | |
| TCCATTTCTTCTTCTAACAT+AGG | + | chr4_1:62185701-62185720 | None:intergenic | 30.0% | |
| AAATGCAACTATTCGTGAAA+TGG | - | chr4_1:62186233-62186252 | Msa0562370:intron | 30.0% | |
| AATGCAACTATTCGTGAAAT+GGG | - | chr4_1:62186234-62186253 | Msa0562370:intron | 30.0% | |
| ! | GGAATTTTGCCAAAATAAAC+GGG | - | chr4_1:62186278-62186297 | Msa0562370:intron | 30.0% |
| TTAGTAAAAACAAGCTTTCC+TGG | - | chr4_1:62186331-62186350 | Msa0562370:intron | 30.0% | |
| ACAAACTGAGGAATCAAATA+AGG | + | chr4_1:62186357-62186376 | None:intergenic | 30.0% | |
| GTAGAAAATGCACTAAAAAC+AGG | + | chr4_1:62186408-62186427 | None:intergenic | 30.0% | |
| TCCACTTAAATCTGCATAAT+TGG | - | chr4_1:62186435-62186454 | Msa0562370:intron | 30.0% | |
| CCACTTAAATCTGCATAATT+GGG | - | chr4_1:62186436-62186455 | Msa0562370:intron | 30.0% | |
| AAATTACAGGCAGAATAATC+AGG | + | chr4_1:62186627-62186646 | None:intergenic | 30.0% | |
| AACTGCTTACCAAAAATTAC+AGG | + | chr4_1:62186640-62186659 | None:intergenic | 30.0% | |
| !! | GTTGATTCATTGGCTTTATT+TGG | - | chr4_1:62186786-62186805 | Msa0562370:CDS | 30.0% |
| !! | TGATTCATTGGCTTTATTTG+GGG | - | chr4_1:62186788-62186807 | Msa0562370:CDS | 30.0% |
| ATTACTTTCTGTCAGTAACT+TGG | - | chr4_1:62186967-62186986 | Msa0562370:intron | 30.0% | |
| TCTCAATTACGTTTAGATGT+TGG | - | chr4_1:62187313-62187332 | Msa0562370:intron | 30.0% | |
| TTCTGTGATTTGATGTCATT+AGG | - | chr4_1:62187380-62187399 | Msa0562370:intron | 30.0% | |
| TCTGTGATTTGATGTCATTA+GGG | - | chr4_1:62187381-62187400 | Msa0562370:intron | 30.0% | |
| CACAACATATTAGAGGAAAA+AGG | + | chr4_1:62187431-62187450 | None:intergenic | 30.0% | |
| CATAACATTAGTGATCAAAC+TGG | + | chr4_1:62187513-62187532 | None:intergenic | 30.0% | |
| AATTCTCCCATCTTAATTGA+TGG | + | chr4_1:62187745-62187764 | None:intergenic | 30.0% | |
| TCAATTAAGATGGGAGAATT+TGG | - | chr4_1:62187745-62187764 | Msa0562370:intron | 30.0% | |
| CAATTAAGATGGGAGAATTT+GGG | - | chr4_1:62187746-62187765 | Msa0562370:intron | 30.0% | |
| TAGCTCATTATGCATTATTG+TGG | - | chr4_1:62187825-62187844 | Msa0562370:intron | 30.0% | |
| AGCTCATTATGCATTATTGT+GGG | - | chr4_1:62187826-62187845 | Msa0562370:intron | 30.0% | |
| AGGTGAATAATCAACATGTT+CGG | + | chr4_1:62188166-62188185 | None:intergenic | 30.0% | |
| TCTTCCACTAATTAATTGCA+TGG | - | chr4_1:62188220-62188239 | Msa0562370:intron | 30.0% | |
| !! | ATCAGTGTATTGATTGAAGA+TGG | - | chr4_1:62188388-62188407 | Msa0562370:CDS | 30.0% |
| GAATACATAGTAAGAATGAG+AGG | + | chr4_1:62188563-62188582 | None:intergenic | 30.0% | |
| CTCATTCTTACTATGTATTC+TGG | - | chr4_1:62188563-62188582 | Msa0562370:CDS | 30.0% | |
| AATTGTACTCTTTCTTCTTG+TGG | - | chr4_1:62188599-62188618 | Msa0562370:CDS | 30.0% | |
| !!! | TTTTCTTGCTATTGTGGTTA+TGG | + | chr4_1:62188692-62188711 | None:intergenic | 30.0% |
| AAAAAAGAGTTTGGTAGATG+AGG | - | chr4_1:62188770-62188789 | Msa0562370:intron | 30.0% | |
| AAAAAGAGTTTGGTAGATGA+GGG | - | chr4_1:62188771-62188790 | Msa0562370:intron | 30.0% | |
| TATTCAAGTCTAACCAATAG+TGG | + | chr4_1:62188903-62188922 | None:intergenic | 30.0% | |
| GCTATTAAAAATCCTAGTGT+AGG | + | chr4_1:62188941-62188960 | None:intergenic | 30.0% | |
| CTAGTGTAACAAACCTATTA+TGG | + | chr4_1:62189045-62189064 | None:intergenic | 30.0% | |
| ATTTAGGCTGAAAGGTAATT+TGG | - | chr4_1:62189165-62189184 | Msa0562370:CDS | 30.0% | |
| TGAAGATTTGACATTATCAG+TGG | + | chr4_1:62189303-62189322 | None:intergenic | 30.0% | |
| ! | TATCTCAATCTTTTCTCTGA+TGG | - | chr4_1:62189368-62189387 | Msa0562370:intron | 30.0% |
| !! | AAGTTGTATTGACCTTTTGT+TGG | - | chr4_1:62189397-62189416 | Msa0562370:intron | 30.0% |
| TTCATTCTTTATGGATCTGT+TGG | - | chr4_1:62189511-62189530 | Msa0562370:intron | 30.0% | |
| ACTGAGCATGTTATAAGATA+AGG | + | chr4_1:62189598-62189617 | None:intergenic | 30.0% | |
| !! | TCTTTCATTTTTCTTGTTGC+TGG | - | chr4_1:62189781-62189800 | Msa0562370:CDS | 30.0% |
| TCATAAGGTTTGGAGAAATA+AGG | - | chr4_1:62190292-62190311 | Msa0562370:intron | 30.0% | |
| CATAAGGTTTGGAGAAATAA+GGG | - | chr4_1:62190293-62190312 | Msa0562370:intron | 30.0% | |
| ATAAGGTTTGGAGAAATAAG+GGG | - | chr4_1:62190294-62190313 | Msa0562370:intron | 30.0% | |
| ! | GCAATTAAGTTGTTAACACA+CGG | + | chr4_1:62190320-62190339 | None:intergenic | 30.0% |
| !!! | ATGACTGAGGTTTTAAATCT+CGG | - | chr4_1:62190475-62190494 | Msa0562370:intron | 30.0% |
| ATCACAAGCACAATAATAGT+TGG | + | chr4_1:62190537-62190556 | None:intergenic | 30.0% | |
| CTATTATTGTGCTTGTGATA+TGG | - | chr4_1:62190538-62190557 | Msa0562370:intron | 30.0% | |
| GTTCAAAAGTTGTCACAAAA+TGG | + | chr4_1:62190632-62190651 | None:intergenic | 30.0% | |
| AAAAAAAGGTTGTCACCAAA+TGG | - | chr4_1:62190735-62190754 | Msa0562370:intron | 30.0% | |
| ! | TCATTACTCGGTCTTTTAAT+AGG | - | chr4_1:62190769-62190788 | Msa0562370:intron | 30.0% |
| ! | CATTACTCGGTCTTTTAATA+GGG | - | chr4_1:62190770-62190789 | Msa0562370:intron | 30.0% |
| ! | ATTACTCGGTCTTTTAATAG+GGG | - | chr4_1:62190771-62190790 | Msa0562370:intron | 30.0% |
| ! | AACAAAAAGCATAAAACTCC+TGG | + | chr4_1:62190997-62191016 | None:intergenic | 30.0% |
| !! | TTTTTGTTTCTTCTGCATAC+AGG | - | chr4_1:62191009-62191028 | Msa0562370:intron | 30.0% |
| ! | AAGTTGAAGAACAAAGCTTT+TGG | + | chr4_1:62191076-62191095 | None:intergenic | 30.0% |
| ! | GAGTATTGTCTTCATTCAAT+AGG | - | chr4_1:62191135-62191154 | Msa0562370:intron | 30.0% |
| TTCAATAGGGAGATGTTTAA+TGG | - | chr4_1:62191149-62191168 | Msa0562370:intron | 30.0% | |
| ATCATATTGTGAATGAGCAT+TGG | - | chr4_1:62191283-62191302 | Msa0562370:CDS | 30.0% | |
| ! | AGGGTATCAAATCAAGTAAA+GGG | + | chr4_1:62191538-62191557 | None:intergenic | 30.0% |
| !! | AAGGGTATCAAATCAAGTAA+AGG | + | chr4_1:62191539-62191558 | None:intergenic | 30.0% |
| !!! | CTGACTATCTCTTATTTTAC+AGG | - | chr4_1:62191715-62191734 | Msa0562370:intron | 30.0% |
| TCAAATAATCTCACTGACAA+TGG | - | chr4_1:62191832-62191851 | Msa0562370:CDS | 30.0% | |
| CAAATAATCTCACTGACAAT+GGG | - | chr4_1:62191833-62191852 | Msa0562370:CDS | 30.0% | |
| AAGGATAGATCAATACAGAA+TGG | - | chr4_1:62192053-62192072 | Msa0562370:CDS | 30.0% | |
| GTTTACTGTGTTAATGGTTA+AGG | + | chr4_1:62192102-62192121 | None:intergenic | 30.0% | |
| TACACAGTTTACTGTGTTAA+TGG | + | chr4_1:62192108-62192127 | None:intergenic | 30.0% | |
| CATAATCTGACAAATGCAAA+CGG | + | chr4_1:62192150-62192169 | None:intergenic | 30.0% | |
| CAATATCCATCAAACACAAT+CGG | + | chr4_1:62192255-62192274 | None:intergenic | 30.0% | |
| GAAAAGGACAAAGACAAATA+AGG | + | chr4_1:62192288-62192307 | None:intergenic | 30.0% | |
| CATTTATTGAGAGTTCCAGT+CGG | + | chr4_1:62185574-62185593 | None:intergenic | 35.0% | |
| GAAATGGATGTGATAACCTT+CGG | - | chr4_1:62185713-62185732 | Msa0562370:three_prime_UTR | 35.0% | |
| ACACTCTTAATTCAGTCCAA+TGG | - | chr4_1:62185808-62185827 | Msa0562370:three_prime_UTR | 35.0% | |
| ! | TTTTGTCAGATCCAAAAAGG+AGG | + | chr4_1:62185903-62185922 | None:intergenic | 35.0% |
| ! | TAATTCCTCTGGAAGTAACT+TGG | + | chr4_1:62186038-62186057 | None:intergenic | 35.0% |
| GAGGAAGATATGAAACTCTA+TGG | - | chr4_1:62186064-62186083 | Msa0562370:CDS | 35.0% | |
| GATATGAAACTCTATGGCTT+CGG | - | chr4_1:62186070-62186089 | Msa0562370:CDS | 35.0% | |
| TTCACGAATAGTTGCATTTG+AGG | + | chr4_1:62186232-62186251 | None:intergenic | 35.0% | |
| !! | ACTATTCGTGAAATGGGTTT+TGG | - | chr4_1:62186240-62186259 | Msa0562370:intron | 35.0% |
| !! | CTATTCGTGAAATGGGTTTT+GGG | - | chr4_1:62186241-62186260 | Msa0562370:intron | 35.0% |
| !! | TATTCGTGAAATGGGTTTTG+GGG | - | chr4_1:62186242-62186261 | Msa0562370:intron | 35.0% |
| !!! | TCACAGTGCTTTTTCAATTG+AGG | - | chr4_1:62186301-62186320 | Msa0562370:intron | 35.0% |
| CCCAATTATGCAGATTTAAG+TGG | + | chr4_1:62186439-62186458 | None:intergenic | 35.0% | |
| TAAATGCTATTCTTGCTTGC+TGG | - | chr4_1:62186498-62186517 | Msa0562370:intron | 35.0% | |
| CAGAATAATCAGGCAAATCA+AGG | + | chr4_1:62186617-62186636 | None:intergenic | 35.0% | |
| ! | CAAAATTTTGCACAGTAGGT+AGG | + | chr4_1:62186712-62186731 | None:intergenic | 35.0% |
| TATTCACCTGTTTCAGTTCA+AGG | - | chr4_1:62186744-62186763 | Msa0562370:intron | 35.0% | |
| ATTCACCTGTTTCAGTTCAA+GGG | - | chr4_1:62186745-62186764 | Msa0562370:intron | 35.0% | |
| !! | AAAGGCTGTTGTTGATTCAT+TGG | - | chr4_1:62186776-62186795 | Msa0562370:intron | 35.0% |
| !! | AGCTTTGTGTCTTTTGTTTC+TGG | - | chr4_1:62187000-62187019 | Msa0562370:intron | 35.0% |
| !!! | TTACCATATCTTTTTCAGGC+AGG | - | chr4_1:62187047-62187066 | Msa0562370:intron | 35.0% |
| ! | CATATCATACCAAAAGCATG+CGG | + | chr4_1:62187107-62187126 | None:intergenic | 35.0% |
| AATTGGATTTCTATGCAGCA+TGG | + | chr4_1:62187246-62187265 | None:intergenic | 35.0% | |
| GTACACACACAACATATTAG+AGG | + | chr4_1:62187438-62187457 | None:intergenic | 35.0% | |
| !! | CTTGTATTTTGTGTTGACCT+TGG | - | chr4_1:62187471-62187490 | Msa0562370:intron | 35.0% |
| CCATACATGATTTCTTCCAA+GGG | + | chr4_1:62187568-62187587 | None:intergenic | 35.0% | |
| AAAAGGGGACAGTAAAACTA+TGG | + | chr4_1:62187921-62187940 | None:intergenic | 35.0% | |
| TGATTCTCTTTAACTGTAGG+TGG | - | chr4_1:62187998-62188017 | Msa0562370:intron | 35.0% | |
| CAGAATTATCATCATGGTCA+TGG | + | chr4_1:62188060-62188079 | None:intergenic | 35.0% | |
| CATGACCATGATGATAATTC+TGG | - | chr4_1:62188058-62188077 | Msa0562370:intron | 35.0% | |
| CATGTCCAGAATTATCATCA+TGG | + | chr4_1:62188066-62188085 | None:intergenic | 35.0% | |
| CATGATGATAATTCTGGACA+TGG | - | chr4_1:62188064-62188083 | Msa0562370:intron | 35.0% | |
| TCTTTAGCTGATCTTTCTAC+AGG | - | chr4_1:62188097-62188116 | Msa0562370:intron | 35.0% | |
| AAGCATATCACTACAAACCT+AGG | + | chr4_1:62188132-62188151 | None:intergenic | 35.0% | |
| !! | AGTGTATTGATTGAAGATGG+AGG | - | chr4_1:62188391-62188410 | Msa0562370:CDS | 35.0% |
| AACCACCATCCTTCATAAAT+TGG | - | chr4_1:62188436-62188455 | Msa0562370:intron | 35.0% | |
| ACCACCATCCTTCATAAATT+GGG | - | chr4_1:62188437-62188456 | Msa0562370:intron | 35.0% | |
| AGGTATGTTGAAGAAAACTC+AGG | - | chr4_1:62188633-62188652 | Msa0562370:CDS | 35.0% | |
| TATGTTGAAGAAAACTCAGG+AGG | - | chr4_1:62188636-62188655 | Msa0562370:CDS | 35.0% | |
| AAAAGAGTTTGGTAGATGAG+GGG | - | chr4_1:62188772-62188791 | Msa0562370:intron | 35.0% | |
| TCAAGTATCACATGACACAT+TGG | - | chr4_1:62188806-62188825 | Msa0562370:intron | 35.0% | |
| ATCTAAATCCTCGCTTAGAA+AGG | - | chr4_1:62188848-62188867 | Msa0562370:intron | 35.0% | |
| ! | TCATTTTACCTTTCTAAGCG+AGG | + | chr4_1:62188859-62188878 | None:intergenic | 35.0% |
| TCGCTTAGAAAGGTAAAATG+AGG | - | chr4_1:62188858-62188877 | Msa0562370:intron | 35.0% | |
| CATGTGATTTAGCCTCATTT+AGG | - | chr4_1:62189149-62189168 | Msa0562370:CDS | 35.0% | |
| ATTACCTTTCAGCCTAAATG+AGG | + | chr4_1:62189164-62189183 | None:intergenic | 35.0% | |
| ATCATTCTGACTACTACCTT+TGG | + | chr4_1:62189264-62189283 | None:intergenic | 35.0% | |
| CCTTCAATTCAACCAACAAA+AGG | + | chr4_1:62189412-62189431 | None:intergenic | 35.0% | |
| !! | CCTTTTGTTGGTTGAATTGA+AGG | - | chr4_1:62189409-62189428 | Msa0562370:intron | 35.0% |
| TTGCAGCATAATTTCACTGA+TGG | - | chr4_1:62189469-62189488 | Msa0562370:intron | 35.0% | |
| TTCACTGATGGAATTGCATT+AGG | - | chr4_1:62189481-62189500 | Msa0562370:intron | 35.0% | |
| ! | GGAAGTGCATTCATTCTTTA+TGG | - | chr4_1:62189502-62189521 | Msa0562370:intron | 35.0% |
| ATTCTTTATGGATCTGTTGG+TGG | - | chr4_1:62189514-62189533 | Msa0562370:intron | 35.0% | |
| GGATGAATTATAACCTCTTG+AGG | + | chr4_1:62189577-62189596 | None:intergenic | 35.0% | |
| !! | TGTAGTGGACAACTTACAAA+AGG | - | chr4_1:62189679-62189698 | Msa0562370:intron | 35.0% |
| ! | TACTGCTTAAGTTTTCGCTA+TGG | - | chr4_1:62189901-62189920 | Msa0562370:intron | 35.0% |
| !! | TTTATTCCCCTAGTTTTTGG+CGG | - | chr4_1:62189977-62189996 | Msa0562370:intron | 35.0% |
| TTAGTTGCTAAGATTCTCGT+CGG | - | chr4_1:62190039-62190058 | Msa0562370:intron | 35.0% | |
| GCACAAATTCAGCCATTATA+AGG | + | chr4_1:62190147-62190166 | None:intergenic | 35.0% | |
| CTTATCACTCCTAAGCATAA+AGG | + | chr4_1:62190254-62190273 | None:intergenic | 35.0% | |
| CTTTATGCTTAGGAGTGATA+AGG | - | chr4_1:62190252-62190271 | Msa0562370:intron | 35.0% | |
| TTGTGATATGGTCTCTATTC+AGG | - | chr4_1:62190550-62190569 | Msa0562370:intron | 35.0% | |
| TGTGATATGGTCTCTATTCA+GGG | - | chr4_1:62190551-62190570 | Msa0562370:intron | 35.0% | |
| ACGACAATAGAGAGAGAAAA+AGG | + | chr4_1:62190695-62190714 | None:intergenic | 35.0% | |
| ! | AAAAGCATAAAACTCCTGGT+GGG | + | chr4_1:62190993-62191012 | None:intergenic | 35.0% |
| ! | AAAAAGCATAAAACTCCTGG+TGG | + | chr4_1:62190994-62191013 | None:intergenic | 35.0% |
| ! | CAACTTTTTATCTGCACTTG+TGG | - | chr4_1:62191090-62191109 | Msa0562370:intron | 35.0% |
| TCATAGCTTCGATATTGTAC+AGG | + | chr4_1:62191397-62191416 | None:intergenic | 35.0% | |
| ! | AGTTTGCGGATTGAGTTATT+GGG | - | chr4_1:62191470-62191489 | Msa0562370:intron | 35.0% |
| GGGTATCAAATCAAGTAAAG+GGG | + | chr4_1:62191537-62191556 | None:intergenic | 35.0% | |
| ! | GTTGAGTTGTAAGCAGAATT+TGG | - | chr4_1:62191690-62191709 | Msa0562370:intron | 35.0% |
| ! | ATTTTACAGGGATTTACTGC+AGG | - | chr4_1:62191728-62191747 | Msa0562370:intron | 35.0% |
| TTTATATACATCGCCATTGC+AGG | - | chr4_1:62191755-62191774 | Msa0562370:intron | 35.0% | |
| TTGCAGAGATGAATGACAAT+GGG | - | chr4_1:62191783-62191802 | Msa0562370:CDS | 35.0% | |
| TGAACGCAGAAAAGCTTATA+GGG | - | chr4_1:62192013-62192032 | Msa0562370:CDS | 35.0% | |
| TAGATCAATACAGAATGGTC+AGG | - | chr4_1:62192058-62192077 | Msa0562370:CDS | 35.0% | |
| TTTCCTCTTTCTTATGCACT+TGG | - | chr4_1:62192215-62192234 | Msa0562370:five_prime_UTR | 35.0% | |
| ! | AAATCACCGATTGTGTTTGA+TGG | - | chr4_1:62192246-62192265 | Msa0562370:five_prime_UTR | 35.0% |
| CTACTACTACTCAATGCCAT+TGG | + | chr4_1:62185827-62185846 | None:intergenic | 40.0% | |
| ! | GTTTCTTTGCTCCTCCTTTT+TGG | - | chr4_1:62185889-62185908 | Msa0562370:three_prime_UTR | 40.0% |
| ! | GGCTTTTGTCAGATCCAAAA+AGG | + | chr4_1:62185906-62185925 | None:intergenic | 40.0% |
| AGAATGAGAGTGACCTTGAT+GGG | + | chr4_1:62185927-62185946 | None:intergenic | 40.0% | |
| TAGAATGAGAGTGACCTTGA+TGG | + | chr4_1:62185928-62185947 | None:intergenic | 40.0% | |
| !! | CAGTGATGATGATGGATGTT+GGG | + | chr4_1:62185953-62185972 | None:intergenic | 40.0% |
| !! | ACAGTGATGATGATGGATGT+TGG | + | chr4_1:62185954-62185973 | None:intergenic | 40.0% |
| AACATCCATCATCATCACTG+TGG | - | chr4_1:62185953-62185972 | Msa0562370:three_prime_UTR | 40.0% | |
| CATGAGCATGATCATGATCA+TGG | + | chr4_1:62185997-62186016 | None:intergenic | 40.0% | |
| ! | ACTTGGACTGTTGATGAACA+TGG | + | chr4_1:62186021-62186040 | None:intergenic | 40.0% |
| GTTACTTCCAGAGGAATTAG+CGG | - | chr4_1:62186039-62186058 | Msa0562370:CDS | 40.0% | |
| !! | AAAGTGATGATGGTCGTGAT+GGG | + | chr4_1:62186101-62186120 | None:intergenic | 40.0% |
| !! | TAAAGTGATGATGGTCGTGA+TGG | + | chr4_1:62186102-62186121 | None:intergenic | 40.0% |
| TTGCATTTGAGGAACCGAAA+TGG | + | chr4_1:62186221-62186240 | None:intergenic | 40.0% | |
| !! | CTGTTCATTTCTAGTGAGCA+TGG | - | chr4_1:62186588-62186607 | Msa0562370:intron | 40.0% |
| AGTTCAAGGGAAACCATCAA+AGG | - | chr4_1:62186758-62186777 | Msa0562370:intron | 40.0% | |
| GAATCAACAACAGCCTTTGA+TGG | + | chr4_1:62186774-62186793 | None:intergenic | 40.0% | |
| AAAGAAGTCTGTGTGTGTGT+GGG | + | chr4_1:62187278-62187297 | None:intergenic | 40.0% | |
| GCACAACTGTTAATACTCCA+AGG | + | chr4_1:62187491-62187510 | None:intergenic | 40.0% | |
| GATGTTTGTCAATCATCCCT+TGG | - | chr4_1:62187549-62187568 | Msa0562370:intron | 40.0% | |
| CCCTTGGAAGAAATCATGTA+TGG | - | chr4_1:62187565-62187584 | Msa0562370:intron | 40.0% | |
| GCCATACATGATTTCTTCCA+AGG | + | chr4_1:62187569-62187588 | None:intergenic | 40.0% | |
| TGTATGGCATGCTAATGAGA+CGG | - | chr4_1:62187581-62187600 | Msa0562370:intron | 40.0% | |
| ATGAGACGGGACTAAAAGTT+TGG | - | chr4_1:62187595-62187614 | Msa0562370:intron | 40.0% | |
| !! | TACTTTTGAAGGAAGCTGAG+TGG | - | chr4_1:62187671-62187690 | Msa0562370:intron | 40.0% |
| GGGACAGTAAAACTATGGAA+AGG | + | chr4_1:62187916-62187935 | None:intergenic | 40.0% | |
| TTCTCTTTAACTGTAGGTGG+TGG | - | chr4_1:62188001-62188020 | Msa0562370:intron | 40.0% | |
| CATGCCCAATTTATGAAGGA+TGG | + | chr4_1:62188444-62188463 | None:intergenic | 40.0% | |
| CATCCTTCATAAATTGGGCA+TGG | - | chr4_1:62188442-62188461 | Msa0562370:intron | 40.0% | |
| TTGTCAAATATCCGCCATGA+TGG | + | chr4_1:62188470-62188489 | None:intergenic | 40.0% | |
| !! | TCTTGCTATTGTGGTTATGG+TGG | + | chr4_1:62188689-62188708 | None:intergenic | 40.0% |
| CTGTGACTGATTGTTGACAT+CGG | + | chr4_1:62188736-62188755 | None:intergenic | 40.0% | |
| AGTATCACATGACACATTGG+AGG | - | chr4_1:62188809-62188828 | Msa0562370:intron | 40.0% | |
| GTATCACATGACACATTGGA+GGG | - | chr4_1:62188810-62188829 | Msa0562370:intron | 40.0% | |
| !!! | CTACAGTTTTGGACCACTAT+TGG | - | chr4_1:62188887-62188906 | Msa0562370:intron | 40.0% |
| ATTGATGTCACACCTACACT+AGG | - | chr4_1:62188926-62188945 | Msa0562370:intron | 40.0% | |
| TTAGCCTCATTTAGGCTGAA+AGG | - | chr4_1:62189157-62189176 | Msa0562370:CDS | 40.0% | |
| ATTCTTGTGTTGCAGAGAAG+TGG | - | chr4_1:62189227-62189246 | Msa0562370:CDS | 40.0% | |
| CCTAATTAAATGGGATGCTG+AGG | + | chr4_1:62189647-62189666 | None:intergenic | 40.0% | |
| CCTCAGCATCCCATTTAATT+AGG | - | chr4_1:62189644-62189663 | Msa0562370:intron | 40.0% | |
| AGGCATAACATAGACTGTAG+TGG | - | chr4_1:62189664-62189683 | Msa0562370:intron | 40.0% | |
| TATTAGCCGCCAAAAACTAG+GGG | + | chr4_1:62189986-62190005 | None:intergenic | 40.0% | |
| GTATTAGCCGCCAAAAACTA+GGG | + | chr4_1:62189987-62190006 | None:intergenic | 40.0% | |
| TGTATTAGCCGCCAAAAACT+AGG | + | chr4_1:62189988-62190007 | None:intergenic | 40.0% | |
| ! | TGATCTTTTATGCAGGAAGC+AGG | + | chr4_1:62190187-62190206 | None:intergenic | 40.0% |
| TATGCTTAGGAGTGATAAGG+TGG | - | chr4_1:62190255-62190274 | Msa0562370:intron | 40.0% | |
| ATGCTTAGGAGTGATAAGGT+GGG | - | chr4_1:62190256-62190275 | Msa0562370:intron | 40.0% | |
| GGGTGAAAGATCATAAGGTT+TGG | - | chr4_1:62190282-62190301 | Msa0562370:intron | 40.0% | |
| GTATCTTGCTTTCATGACTG+AGG | - | chr4_1:62190462-62190481 | Msa0562370:intron | 40.0% | |
| CTCTATTGTCGTTGACCAAT+AGG | - | chr4_1:62190703-62190722 | Msa0562370:intron | 40.0% | |
| ACGAAAAGGAATGTACGAGA+TGG | + | chr4_1:62190829-62190848 | None:intergenic | 40.0% | |
| !!! | ATATTTTTTGGTTCCCCACC+AGG | - | chr4_1:62190976-62190995 | Msa0562370:intron | 40.0% |
| AAAGCATAAAACTCCTGGTG+GGG | + | chr4_1:62190992-62191011 | None:intergenic | 40.0% | |
| TGTTTCTTCTGCATACAGGT+TGG | - | chr4_1:62191013-62191032 | Msa0562370:intron | 40.0% | |
| !!! | TGCATACAGGTTGGTGATTT+TGG | - | chr4_1:62191022-62191041 | Msa0562370:intron | 40.0% |
| !! | TGAGCATTGGAGAAACGAAA+TGG | - | chr4_1:62191296-62191315 | Msa0562370:CDS | 40.0% |
| ! | GAGTTTGCGGATTGAGTTAT+TGG | - | chr4_1:62191469-62191488 | Msa0562370:intron | 40.0% |
| AAATCAAGTAAAGGGGAGAG+GGG | + | chr4_1:62191530-62191549 | None:intergenic | 40.0% | |
| CAAATCAAGTAAAGGGGAGA+GGG | + | chr4_1:62191531-62191550 | None:intergenic | 40.0% | |
| TCAAATCAAGTAAAGGGGAG+AGG | + | chr4_1:62191532-62191551 | None:intergenic | 40.0% | |
| CTTGCAGAGATGAATGACAA+TGG | - | chr4_1:62191782-62191801 | Msa0562370:CDS | 40.0% | |
| AATCTCACTGACAATGGGAA+TGG | - | chr4_1:62191838-62191857 | Msa0562370:CDS | 40.0% | |
| GTGAACGCAGAAAAGCTTAT+AGG | - | chr4_1:62192012-62192031 | Msa0562370:CDS | 40.0% | |
| TGACAAATGCAAACGGTTTG+TGG | + | chr4_1:62192143-62192162 | None:intergenic | 40.0% | |
| GACTGCTATACAGCTCAAAA+GGG | + | chr4_1:62192188-62192207 | None:intergenic | 40.0% | |
| TGACTGCTATACAGCTCAAA+AGG | + | chr4_1:62192189-62192208 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTGTATAGCAGTC+AGG | - | chr4_1:62192188-62192207 | Msa0562370:five_prime_UTR | 40.0% |
| TCACCAAGTGCATAAGAAAG+AGG | + | chr4_1:62192221-62192240 | None:intergenic | 40.0% | |
| TTATTGAGAGTTCCAGTCGG+TGG | + | chr4_1:62185571-62185590 | None:intergenic | 45.0% | |
| TGGGGTTGACCGATAAGAAA+TGG | - | chr4_1:62185624-62185643 | Msa0562370:three_prime_UTR | 45.0% | |
| AACGGCGATTATTATGCCGA+AGG | + | chr4_1:62185732-62185751 | None:intergenic | 45.0% | |
| GTCTGCTACATCACCATTGA+AGG | - | chr4_1:62185773-62185792 | Msa0562370:three_prime_UTR | 45.0% | |
| ! | TGACTTGCAAGTGCCTTCAA+TGG | + | chr4_1:62185789-62185808 | None:intergenic | 45.0% |
| GATCTGACAAAAGCCCATCA+AGG | - | chr4_1:62185911-62185930 | Msa0562370:three_prime_UTR | 45.0% | |
| ATCCATCATCATCACTGTGG+TGG | - | chr4_1:62185956-62185975 | Msa0562370:three_prime_UTR | 45.0% | |
| ACAGTCCAAGTTACTTCCAG+AGG | - | chr4_1:62186030-62186049 | Msa0562370:CDS | 45.0% | |
| !! | AAGTGATGATGGTCGTGATG+GGG | + | chr4_1:62186100-62186119 | None:intergenic | 45.0% |
| TGGAGGCAGTAAAGTGATGA+TGG | + | chr4_1:62186111-62186130 | None:intergenic | 45.0% | |
| TACTGCCTCCACTGAACTAT+CGG | - | chr4_1:62186120-62186139 | Msa0562370:CDS | 45.0% | |
| TAAACCCGATAGTTCAGTGG+AGG | + | chr4_1:62186128-62186147 | None:intergenic | 45.0% | |
| TCCACTGAACTATCGGGTTT+AGG | - | chr4_1:62186127-62186146 | Msa0562370:CDS | 45.0% | |
| ACCTAAACCCGATAGTTCAG+TGG | + | chr4_1:62186131-62186150 | None:intergenic | 45.0% | |
| ! | GCACTGTGACCCGTTTATTT+TGG | + | chr4_1:62186290-62186309 | None:intergenic | 45.0% |
| CTGAGGAATCAAATAAGGCC+AGG | + | chr4_1:62186352-62186371 | None:intergenic | 45.0% | |
| AGGTCTTTGGTTGAATGCGT+TGG | - | chr4_1:62186564-62186583 | Msa0562370:intron | 45.0% | |
| GGTCTTTGGTTGAATGCGTT+GGG | - | chr4_1:62186565-62186584 | Msa0562370:intron | 45.0% | |
| GGTTTCCCTTGAACTGAAAC+AGG | + | chr4_1:62186753-62186772 | None:intergenic | 45.0% | |
| !! | CATTGGCTTTATTTGGGGTC+AGG | - | chr4_1:62186793-62186812 | Msa0562370:CDS | 45.0% |
| AGTTATGATTGTCGGCATGC+TGG | - | chr4_1:62186926-62186945 | Msa0562370:intron | 45.0% | |
| GCTCCTGCCTGAAAAAGATA+TGG | + | chr4_1:62187053-62187072 | None:intergenic | 45.0% | |
| !! | TTTTCAGGCAGGAGCTATGT+TGG | - | chr4_1:62187058-62187077 | Msa0562370:intron | 45.0% |
| TTTCAGGCAGGAGCTATGTT+GGG | - | chr4_1:62187059-62187078 | Msa0562370:intron | 45.0% | |
| ! | TACCAAAAGCATGCGGTAGT+TGG | + | chr4_1:62187100-62187119 | None:intergenic | 45.0% |
| ! | TGTGTGGGCTTTCTGAGAAT+TGG | + | chr4_1:62187263-62187282 | None:intergenic | 45.0% |
| GAAAGAAGTCTGTGTGTGTG+TGG | + | chr4_1:62187279-62187298 | None:intergenic | 45.0% | |
| GTATGGCATGCTAATGAGAC+GGG | - | chr4_1:62187582-62187601 | Msa0562370:intron | 45.0% | |
| ! | CGGGACTAAAAGTTTGGAAC+TGG | - | chr4_1:62187601-62187620 | Msa0562370:intron | 45.0% |
| GGTGAACATTCCCATTCTCA+TGG | - | chr4_1:62188022-62188041 | Msa0562370:intron | 45.0% | |
| TGCATGGTCACCATGAGAAT+GGG | + | chr4_1:62188035-62188054 | None:intergenic | 45.0% | |
| TCTACAGGAATGTCTGTCCT+AGG | - | chr4_1:62188112-62188131 | Msa0562370:intron | 45.0% | |
| GCCCAATTTATGAAGGATGG+TGG | + | chr4_1:62188441-62188460 | None:intergenic | 45.0% | |
| !! | TGTATTCTGGTTCTTGCAGC+TGG | - | chr4_1:62188576-62188595 | Msa0562370:CDS | 45.0% |
| TTCTTGTGGAGAAGCTAGTG+AGG | - | chr4_1:62188613-62188632 | Msa0562370:CDS | 45.0% | |
| TGCTATTGTGGTTATGGTGG+TGG | + | chr4_1:62188686-62188705 | None:intergenic | 45.0% | |
| AGCGAGGATTTAGATTGAGC+TGG | + | chr4_1:62188843-62188862 | None:intergenic | 45.0% | |
| ! | TGAGGATGTCGCTACAGTTT+TGG | - | chr4_1:62188876-62188895 | Msa0562370:intron | 45.0% |
| AGTGGAAGCAATGCAACCAA+AGG | - | chr4_1:62189245-62189264 | Msa0562370:CDS | 45.0% | |
| !! | TTTATGGATCTGTTGGTGGC+TGG | - | chr4_1:62189518-62189537 | Msa0562370:intron | 45.0% |
| GGCACATGAAATTCCTCAAG+AGG | - | chr4_1:62189561-62189580 | Msa0562370:intron | 45.0% | |
| TTAGGAGTGATAAGGTGGGT+TGG | - | chr4_1:62190260-62190279 | Msa0562370:intron | 45.0% | |
| ! | TAGGAGTGATAAGGTGGGTT+GGG | - | chr4_1:62190261-62190280 | Msa0562370:intron | 45.0% |
| GGTTGGGGTGAAAGATCATA+AGG | - | chr4_1:62190277-62190296 | Msa0562370:intron | 45.0% | |
| ! | ATGCTTTGAGCGTAGTGAAC+TGG | - | chr4_1:62190872-62190891 | Msa0562370:intron | 45.0% |
| ! | GTTTTACTCGAGGGAGTTTG+CGG | - | chr4_1:62191456-62191475 | Msa0562370:intron | 45.0% |
| ! | TTTTGGTATAGGCTCTGCTC+TGG | - | chr4_1:62191605-62191624 | Msa0562370:intron | 45.0% |
| TTTGGTATAGGCTCTGCTCT+GGG | - | chr4_1:62191606-62191625 | Msa0562370:intron | 45.0% | |
| AGCATTCCTCACCTCAATCA+GGG | + | chr4_1:62191653-62191672 | None:intergenic | 45.0% | |
| TTACAGGGATTTACTGCAGG+TGG | - | chr4_1:62191731-62191750 | Msa0562370:intron | 45.0% | |
| CGCAGAAAAGCTTATAGGGA+AGG | - | chr4_1:62192017-62192036 | Msa0562370:CDS | 45.0% | |
| GGAAGGTGAACTGAGAGAAA+AGG | - | chr4_1:62192034-62192053 | Msa0562370:CDS | 45.0% | |
| !!! | AAATCTTTTTTTTTTTTTTT+TGG | - | chr4_1:62185604-62185623 | Msa0562370:three_prime_UTR | 5.0% |
| !!! | AATCTTTTTTTTTTTTTTTT+GGG | - | chr4_1:62185605-62185624 | Msa0562370:three_prime_UTR | 5.0% |
| !!! | TTTTTCTTAATAAATTAAAA+TGG | - | chr4_1:62191359-62191378 | Msa0562370:intron | 5.0% |
| ! | CTCCACCACAGTGATGATGA+TGG | + | chr4_1:62185961-62185980 | None:intergenic | 50.0% |
| TCCAGAGGAATTAGCGGAAG+AGG | - | chr4_1:62186045-62186064 | Msa0562370:CDS | 50.0% | |
| TCCTCTTCCGCTAATTCCTC+TGG | + | chr4_1:62186049-62186068 | None:intergenic | 50.0% | |
| ACTGCCTCCACTGAACTATC+GGG | - | chr4_1:62186121-62186140 | Msa0562370:CDS | 50.0% | |
| TTCAGGCAGGAGCTATGTTG+GGG | - | chr4_1:62187060-62187079 | Msa0562370:intron | 50.0% | |
| ! | CACCAACTACCGCATGCTTT+TGG | - | chr4_1:62187095-62187114 | Msa0562370:intron | 50.0% |
| TTTGAAGGAAGCTGAGTGGC+AGG | - | chr4_1:62187675-62187694 | Msa0562370:intron | 50.0% | |
| TTGAAGGAAGCTGAGTGGCA+GGG | - | chr4_1:62187676-62187695 | Msa0562370:intron | 50.0% | |
| CTGCATGGTCACCATGAGAA+TGG | + | chr4_1:62188036-62188055 | None:intergenic | 50.0% | |
| CATCATGGTCATGGTCTGCA+TGG | + | chr4_1:62188051-62188070 | None:intergenic | 50.0% | |
| GGAATGCCAAAAATCCGCCA+TGG | - | chr4_1:62188412-62188431 | Msa0562370:CDS | 50.0% | |
| !!! | TGGTTGCCATGGCGGATTTT+TGG | + | chr4_1:62188421-62188440 | None:intergenic | 50.0% |
| ! | ATGAAGGATGGTGGTTGCCA+TGG | + | chr4_1:62188432-62188451 | None:intergenic | 50.0% |
| GCGCCATGCCCAATTTATGA+AGG | + | chr4_1:62188448-62188467 | None:intergenic | 50.0% | |
| CCAAACACAAGACTGCTTGC+TGG | + | chr4_1:62189347-62189366 | None:intergenic | 50.0% | |
| ! | CCAGCAAGCAGTCTTGTGTT+TGG | - | chr4_1:62189344-62189363 | Msa0562370:intron | 50.0% |
| !! | AGGAGTGATAAGGTGGGTTG+GGG | - | chr4_1:62190262-62190281 | Msa0562370:intron | 50.0% |
| TTGGTATAGGCTCTGCTCTG+GGG | - | chr4_1:62191607-62191626 | Msa0562370:intron | 50.0% | |
| TCAATCAGGGATGACTGTCC+AGG | + | chr4_1:62191640-62191659 | None:intergenic | 50.0% | |
| TGGACAGTCATCCCTGATTG+AGG | - | chr4_1:62191639-62191658 | Msa0562370:intron | 50.0% | |
| AGTCATCCCTGATTGAGGTG+AGG | - | chr4_1:62191644-62191663 | Msa0562370:intron | 50.0% | |
| GAGCATTCCTCACCTCAATC+AGG | + | chr4_1:62191654-62191673 | None:intergenic | 50.0% | |
| ATGCTCCATGATGCATCTGC+TGG | - | chr4_1:62191668-62191687 | Msa0562370:intron | 50.0% | |
| CTCAACCAGCAGATGCATCA+TGG | + | chr4_1:62191676-62191695 | None:intergenic | 50.0% | |
| ATGGGAATGGCTGTTGCACT+TGG | - | chr4_1:62191851-62191870 | Msa0562370:CDS | 50.0% | |
| TCAGGCAGGAGCTATGTTGG+GGG | - | chr4_1:62187061-62187080 | Msa0562370:intron | 55.0% | |
| ! | AAGGATGGTGGTTGCCATGG+CGG | + | chr4_1:62188429-62188448 | None:intergenic | 55.0% |
| AATTGGGCATGGCGCCATCA+TGG | - | chr4_1:62188453-62188472 | Msa0562370:intron | 55.0% | |
| ACTCAGGAGGAGCTAACTCG+TGG | - | chr4_1:62188649-62188668 | Msa0562370:CDS | 55.0% | |
| CTCAGGAGGAGCTAACTCGT+GGG | - | chr4_1:62188650-62188669 | Msa0562370:CDS | 55.0% | |
| TCAGGAGGAGCTAACTCGTG+GGG | - | chr4_1:62188651-62188670 | Msa0562370:CDS | 55.0% | |
| ! | AGACTGCTTGCTGGTCTAGC+TGG | + | chr4_1:62189338-62189357 | None:intergenic | 55.0% |
| TCTGCACTTGTGGCACTTGC+AGG | - | chr4_1:62191100-62191119 | Msa0562370:intron | 55.0% | |
| CAAGTAAAGGGGAGAGGGGA+TGG | + | chr4_1:62191526-62191545 | None:intergenic | 55.0% | |
| TGGTATAGGCTCTGCTCTGG+GGG | - | chr4_1:62191608-62191627 | Msa0562370:intron | 55.0% | |
| CTCTGCAAGCACTCCTGCAA+TGG | + | chr4_1:62191771-62191790 | None:intergenic | 55.0% | |
| CAGGAGGAGCTAACTCGTGG+GGG | - | chr4_1:62188652-62188671 | Msa0562370:intron | 60.0% | |
| ! | GGCACTTGCAGGCACTGCAT+TGG | - | chr4_1:62191111-62191130 | Msa0562370:CDS | 60.0% |
| !! | CTGCTCTGGGGGAAAGATCC+TGG | - | chr4_1:62191619-62191638 | Msa0562370:intron | 60.0% |
| TGGGCATGGCGCCATCATGG+CGG | - | chr4_1:62188456-62188475 | Msa0562370:intron | 65.0% | |
| GGAGCTAACTCGTGGGGGCA+TGG | - | chr4_1:62188657-62188676 | Msa0562370:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 62185561 | 62192351 | 62185561 | ID=Msa0562370;Name=Msa0562370 |
| chr4_1 | mRNA | 62185561 | 62192351 | 62185561 | ID=Msa0562370-mRNA-1;Parent=Msa0562370;Name=Msa0562370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=239|1|1|1|0.90|0.83|12|459|487 |
| chr4_1 | exon | 62185561 | 62186175 | 62185561 | ID=Msa0562370-mRNA-1:exon:19666;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62186252 | 62186296 | 62186252 | ID=Msa0562370-mRNA-1:exon:19665;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62186780 | 62186881 | 62186780 | ID=Msa0562370-mRNA-1:exon:19664;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62188330 | 62188437 | 62188330 | ID=Msa0562370-mRNA-1:exon:19663;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62188518 | 62188670 | 62188518 | ID=Msa0562370-mRNA-1:exon:19662;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62189043 | 62189317 | 62189043 | ID=Msa0562370-mRNA-1:exon:19661;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62189779 | 62189895 | 62189779 | ID=Msa0562370-mRNA-1:exon:19660;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62190796 | 62190847 | 62190796 | ID=Msa0562370-mRNA-1:exon:19659;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62191103 | 62191152 | 62191103 | ID=Msa0562370-mRNA-1:exon:19658;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62191263 | 62191346 | 62191263 | ID=Msa0562370-mRNA-1:exon:19657;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62191764 | 62192294 | 62191764 | ID=Msa0562370-mRNA-1:exon:19656;Parent=Msa0562370-mRNA-1 |
| chr4_1 | exon | 62192322 | 62192351 | 62192322 | ID=Msa0562370-mRNA-1:exon:19655;Parent=Msa0562370-mRNA-1 |
| chr4_1 | five_prime_UTR | 62192322 | 62192351 | 62192322 | ID=Msa0562370-mRNA-1:five_prime_utr;Parent=Msa0562370-mRNA-1 |
| chr4_1 | five_prime_UTR | 62192086 | 62192294 | 62192086 | ID=Msa0562370-mRNA-1:five_prime_utr;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62191764 | 62192085 | 62191764 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62191263 | 62191346 | 62191263 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62191103 | 62191152 | 62191103 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62190796 | 62190847 | 62190796 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62189779 | 62189895 | 62189779 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62189043 | 62189317 | 62189043 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62188518 | 62188670 | 62188518 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62188330 | 62188437 | 62188330 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62186780 | 62186881 | 62186780 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62186252 | 62186296 | 62186252 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | CDS | 62186020 | 62186175 | 62186020 | ID=Msa0562370-mRNA-1:cds;Parent=Msa0562370-mRNA-1 |
| chr4_1 | three_prime_UTR | 62185561 | 62186019 | 62185561 | ID=Msa0562370-mRNA-1:three_prime_utr;Parent=Msa0562370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
