Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657310 | RHN42672.1 | 98.750 | 320 | 4 | 0 | 1 | 320 | 160 | 479 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657310 | sp|F4KGE8|GIL1_ARATH | 32.932 | 249 | 134 | 5 | 88 | 312 | 316 | 555 | 6.25e-34 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657310 | Msa0701440 | 0.945688 | 1.911717e-104 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657310 | MtrunA17_Chr8g0379551 | 98.750 | 320 | 4 | 0 | 1 | 320 | 160 | 479 | 0.0 | 657 |
| Msa0657310 | MtrunA17_Chr2g0315531 | 48.734 | 316 | 156 | 3 | 1 | 312 | 137 | 450 | 2.44e-93 | 285 |
| Msa0657310 | MtrunA17_Chr8g0359791 | 47.771 | 314 | 151 | 5 | 3 | 313 | 106 | 409 | 1.08e-88 | 271 |
| Msa0657310 | MtrunA17_Chr4g0011611 | 39.815 | 324 | 168 | 4 | 1 | 313 | 106 | 413 | 1.01e-76 | 241 |
| Msa0657310 | MtrunA17_Chr7g0230481 | 35.385 | 325 | 182 | 5 | 3 | 313 | 213 | 523 | 4.58e-53 | 182 |
| Msa0657310 | MtrunA17_Chr5g0432511 | 32.237 | 304 | 183 | 3 | 16 | 319 | 99 | 379 | 2.16e-42 | 150 |
| Msa0657310 | MtrunA17_Chr3g0103691 | 28.972 | 321 | 202 | 4 | 9 | 312 | 166 | 477 | 4.02e-41 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657310 | AT1G29300.1 | 54.601 | 326 | 123 | 4 | 1 | 320 | 153 | 459 | 3.13e-113 | 336 |
| Msa0657310 | AT1G53380.2 | 48.447 | 322 | 154 | 3 | 1 | 314 | 135 | 452 | 2.64e-99 | 300 |
| Msa0657310 | AT1G53380.4 | 48.447 | 322 | 154 | 3 | 1 | 314 | 135 | 452 | 2.64e-99 | 300 |
| Msa0657310 | AT1G53380.1 | 48.447 | 322 | 154 | 3 | 1 | 314 | 135 | 452 | 2.64e-99 | 300 |
| Msa0657310 | AT1G53380.3 | 48.447 | 322 | 154 | 3 | 1 | 314 | 135 | 452 | 2.64e-99 | 300 |
| Msa0657310 | AT1G53380.5 | 48.447 | 322 | 154 | 3 | 1 | 314 | 135 | 452 | 2.64e-99 | 300 |
| Msa0657310 | AT3G14870.4 | 47.022 | 319 | 158 | 5 | 1 | 313 | 149 | 462 | 2.10e-94 | 288 |
| Msa0657310 | AT3G14870.5 | 47.022 | 319 | 158 | 5 | 1 | 313 | 149 | 462 | 2.10e-94 | 288 |
| Msa0657310 | AT3G14870.2 | 47.022 | 319 | 158 | 5 | 1 | 313 | 149 | 462 | 2.10e-94 | 288 |
| Msa0657310 | AT3G14870.3 | 47.022 | 319 | 158 | 5 | 1 | 313 | 150 | 463 | 2.41e-94 | 288 |
| Msa0657310 | AT3G14870.1 | 47.022 | 319 | 158 | 5 | 1 | 313 | 153 | 466 | 3.12e-94 | 288 |
| Msa0657310 | AT2G45260.1 | 39.938 | 323 | 178 | 3 | 1 | 315 | 107 | 421 | 9.70e-77 | 241 |
| Msa0657310 | AT3G60680.1 | 35.032 | 314 | 189 | 3 | 3 | 313 | 193 | 494 | 3.58e-60 | 200 |
| Msa0657310 | AT2G30380.1 | 34.211 | 304 | 154 | 6 | 15 | 313 | 149 | 411 | 9.47e-45 | 157 |
| Msa0657310 | AT5G58960.2 | 32.932 | 249 | 134 | 5 | 88 | 312 | 241 | 480 | 1.41e-35 | 134 |
| Msa0657310 | AT5G58960.3 | 32.932 | 249 | 134 | 5 | 88 | 312 | 241 | 480 | 1.41e-35 | 134 |
| Msa0657310 | AT5G58960.1 | 32.932 | 249 | 134 | 5 | 88 | 312 | 316 | 555 | 6.35e-35 | 134 |
| Msa0657310 | AT4G34080.1 | 34.673 | 199 | 122 | 2 | 1 | 191 | 83 | 281 | 7.47e-34 | 125 |
| Msa0657310 | AT4G33320.1 | 33.854 | 192 | 118 | 3 | 1 | 183 | 83 | 274 | 1.11e-29 | 115 |
| Msa0657310 | AT2G32130.1 | 53.571 | 56 | 26 | 0 | 1 | 56 | 101 | 156 | 7.39e-11 | 60.1 |
Find 42 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTAATTCCGGCGAGTTTC+GGG | 0.120775 | 4_3:+66939324 | Msa0657310:CDS |
| ATGGACAACTTGATGATATT+TGG | 0.163563 | 4_3:-66939044 | None:intergenic |
| ATTCTAATTCCGGCGAGTTT+CGG | 0.208130 | 4_3:+66939323 | Msa0657310:CDS |
| ATTTGTCAAAATAGTGATTT+TGG | 0.234573 | 4_3:-66938943 | None:intergenic |
| GATTCTATTGATTCTAATTC+CGG | 0.300156 | 4_3:+66939313 | Msa0657310:CDS |
| CGGAGATGGCAAAGCGCGTT+TGG | 0.317538 | 4_3:+66939161 | Msa0657310:CDS |
| TTCTCCTTGAAGCTTCTTGA+TGG | 0.321429 | 4_3:-66938528 | None:intergenic |
| CTTCTTGATGGTGATTTCAT+AGG | 0.327494 | 4_3:-66938516 | None:intergenic |
| TTCTTATTGATCTCAAAGTA+TGG | 0.329293 | 4_3:-66938718 | None:intergenic |
| GAGTCAGGTTTATCTGTCTT+TGG | 0.330222 | 4_3:+66939396 | Msa0657310:CDS |
| CAGAGGAAGCTAGTGAATTC+TGG | 0.337395 | 4_3:+66939103 | Msa0657310:CDS |
| TCAAGTTGTCCATGCTAAAA+TGG | 0.340049 | 4_3:+66939054 | Msa0657310:CDS |
| GAAACTTATGATTGAAGAAA+TGG | 0.349019 | 4_3:+66938748 | Msa0657310:CDS |
| TCAGTTTCAACTTCATGTTC+AGG | 0.353607 | 4_3:+66939289 | Msa0657310:CDS |
| AAAATGGAGTGTTCTTTGTT+TGG | 0.368125 | 4_3:+66939070 | Msa0657310:CDS |
| AAGAAATGGAATCAGCAAAC+TGG | 0.369176 | 4_3:+66938762 | Msa0657310:CDS |
| CGTTTGGACACTGCATTACT+TGG | 0.373882 | 4_3:+66939177 | Msa0657310:CDS |
| GATTCAACATTGAAAGTTCA+AGG | 0.402308 | 4_3:-66938670 | None:intergenic |
| AACTTGGCAAAAGATGAGTT+TGG | 0.414833 | 4_3:-66939013 | None:intergenic |
| GGTTTGGTGAAAACTGCATT+TGG | 0.434711 | 4_3:-66938815 | None:intergenic |
| AAAACAACGATGACTTGGTT+TGG | 0.448235 | 4_3:-66938831 | None:intergenic |
| GTTTGCATAACAATGTTTGA+AGG | 0.448726 | 4_3:+66938869 | Msa0657310:CDS |
| TAGGTTCTCTGAGGTTTACA+TGG | 0.451972 | 4_3:+66939249 | Msa0657310:CDS |
| ATCACCATCAAGAAGCTTCA+AGG | 0.452355 | 4_3:+66938524 | Msa0657310:CDS |
| CAGAATTCACTAGCTTCCTC+TGG | 0.453524 | 4_3:-66939102 | None:intergenic |
| CAGTTTCAACTTCATGTTCA+GGG | 0.460825 | 4_3:+66939290 | Msa0657310:CDS |
| TAAGACAGTGATACAGAGTC+AGG | 0.472174 | 4_3:+66939381 | Msa0657310:CDS |
| TCAGGTTTATCTGTCTTTGG+TGG | 0.472612 | 4_3:+66939399 | Msa0657310:CDS |
| TTCAGGTCAAGAAGAATACT+AGG | 0.473719 | 4_3:+66939230 | Msa0657310:CDS |
| AAAGCAAAACAACGATGACT+TGG | 0.515541 | 4_3:-66938836 | None:intergenic |
| AGAAATGGAATCAGCAAACT+GGG | 0.539408 | 4_3:+66938763 | Msa0657310:CDS |
| TTTGGTGAATATTGTGAAGA+GGG | 0.541008 | 4_3:-66938925 | None:intergenic |
| TGGTGAAAACTGCATTTGGA+TGG | 0.559887 | 4_3:-66938811 | None:intergenic |
| GTGGTGCCTGGTTTCAACAT+TGG | 0.564074 | 4_3:+66939358 | Msa0657310:CDS |
| TAATTCCGGCGAGTTTCGGG+TGG | 0.572386 | 4_3:+66939327 | Msa0657310:CDS |
| GAAAACCACCCGAAACTCGC+CGG | 0.587240 | 4_3:-66939332 | None:intergenic |
| AGTTTCAACTTCATGTTCAG+GGG | 0.594405 | 4_3:+66939291 | Msa0657310:CDS |
| TGTTTGGAAATTTGAACCAG+AGG | 0.621071 | 4_3:+66939086 | Msa0657310:CDS |
| AGGAAGCTAGTGAATTCTGG+AGG | 0.632294 | 4_3:+66939106 | Msa0657310:CDS |
| GTCTTACCAATGTTGAAACC+AGG | 0.633731 | 4_3:-66939364 | None:intergenic |
| GAAGAATACTAGGTTCTCTG+AGG | 0.672182 | 4_3:+66939240 | Msa0657310:CDS |
| GGAAGCTAGTGAATTCTGGA+GGG | 0.675270 | 4_3:+66939107 | Msa0657310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTCAAAATAGTGATTT+TGG | - | chr4_3:66938946-66938965 | None:intergenic | 20.0% |
| !!! | ATATTTGGATTTTAGAAACT+TGG | - | chr4_3:66939032-66939051 | None:intergenic | 20.0% |
| !!! | ATTTGTCAAAATAGTGATTT+TGG | - | chr4_3:66938946-66938965 | None:intergenic | 20.0% |
| !!! | ATATTTGGATTTTAGAAACT+TGG | - | chr4_3:66939032-66939051 | None:intergenic | 20.0% |
| ! | TTCTTATTGATCTCAAAGTA+TGG | - | chr4_3:66938721-66938740 | None:intergenic | 25.0% |
| ! | GAAACTTATGATTGAAGAAA+TGG | + | chr4_3:66938748-66938767 | Msa0657310:CDS | 25.0% |
| !!! | ACTATTTTGACAAATTCAAG+AGG | + | chr4_3:66938951-66938970 | Msa0657310:CDS | 25.0% |
| !!! | TTGTTTTCTAAGTACTGTTT+TGG | - | chr4_3:66938992-66939011 | None:intergenic | 25.0% |
| !!! | GATTCTATTGATTCTAATTC+CGG | + | chr4_3:66939313-66939332 | Msa0657310:CDS | 25.0% |
| ! | TTCTTATTGATCTCAAAGTA+TGG | - | chr4_3:66938721-66938740 | None:intergenic | 25.0% |
| ! | GAAACTTATGATTGAAGAAA+TGG | + | chr4_3:66938748-66938767 | Msa0657310:CDS | 25.0% |
| !!! | ACTATTTTGACAAATTCAAG+AGG | + | chr4_3:66938951-66938970 | Msa0657310:CDS | 25.0% |
| !!! | TTGTTTTCTAAGTACTGTTT+TGG | - | chr4_3:66938992-66939011 | None:intergenic | 25.0% |
| !!! | GATTCTATTGATTCTAATTC+CGG | + | chr4_3:66939313-66939332 | Msa0657310:CDS | 25.0% |
| !!! | CTCATCAAGTTTTTTTCTGA+GGG | - | chr4_3:66938582-66938601 | None:intergenic | 30.0% |
| !!! | ACTCATCAAGTTTTTTTCTG+AGG | - | chr4_3:66938583-66938602 | None:intergenic | 30.0% |
| GATTCAACATTGAAAGTTCA+AGG | - | chr4_3:66938673-66938692 | None:intergenic | 30.0% | |
| GTTTGCATAACAATGTTTGA+AGG | + | chr4_3:66938869-66938888 | Msa0657310:CDS | 30.0% | |
| TTTGGTGAATATTGTGAAGA+GGG | - | chr4_3:66938928-66938947 | None:intergenic | 30.0% | |
| ! | TTTTGGTGAATATTGTGAAG+AGG | - | chr4_3:66938929-66938948 | None:intergenic | 30.0% |
| ! | ATGGACAACTTGATGATATT+TGG | - | chr4_3:66939047-66939066 | None:intergenic | 30.0% |
| ! | AAAATGGAGTGTTCTTTGTT+TGG | + | chr4_3:66939070-66939089 | Msa0657310:CDS | 30.0% |
| !!! | AGCTTTTTTCTTAGCTTTTG+CGG | + | chr4_3:66939141-66939160 | Msa0657310:CDS | 30.0% |
| ! | AGAAGATGTTAGCATTTTTC+AGG | + | chr4_3:66939213-66939232 | Msa0657310:CDS | 30.0% |
| !!! | CTCATCAAGTTTTTTTCTGA+GGG | - | chr4_3:66938582-66938601 | None:intergenic | 30.0% |
| !!! | ACTCATCAAGTTTTTTTCTG+AGG | - | chr4_3:66938583-66938602 | None:intergenic | 30.0% |
| GATTCAACATTGAAAGTTCA+AGG | - | chr4_3:66938673-66938692 | None:intergenic | 30.0% | |
| GTTTGCATAACAATGTTTGA+AGG | + | chr4_3:66938869-66938888 | Msa0657310:CDS | 30.0% | |
| TTTGGTGAATATTGTGAAGA+GGG | - | chr4_3:66938928-66938947 | None:intergenic | 30.0% | |
| ! | TTTTGGTGAATATTGTGAAG+AGG | - | chr4_3:66938929-66938948 | None:intergenic | 30.0% |
| ! | ATGGACAACTTGATGATATT+TGG | - | chr4_3:66939047-66939066 | None:intergenic | 30.0% |
| ! | AAAATGGAGTGTTCTTTGTT+TGG | + | chr4_3:66939070-66939089 | Msa0657310:CDS | 30.0% |
| !!! | AGCTTTTTTCTTAGCTTTTG+CGG | + | chr4_3:66939141-66939160 | Msa0657310:CDS | 30.0% |
| ! | AGAAGATGTTAGCATTTTTC+AGG | + | chr4_3:66939213-66939232 | Msa0657310:CDS | 30.0% |
| !! | CTTCTTGATGGTGATTTCAT+AGG | - | chr4_3:66938519-66938538 | None:intergenic | 35.0% |
| AAGAAATGGAATCAGCAAAC+TGG | + | chr4_3:66938762-66938781 | Msa0657310:CDS | 35.0% | |
| AGAAATGGAATCAGCAAACT+GGG | + | chr4_3:66938763-66938782 | Msa0657310:CDS | 35.0% | |
| !! | AAAACAACGATGACTTGGTT+TGG | - | chr4_3:66938834-66938853 | None:intergenic | 35.0% |
| AAAGCAAAACAACGATGACT+TGG | - | chr4_3:66938839-66938858 | None:intergenic | 35.0% | |
| AACTTGGCAAAAGATGAGTT+TGG | - | chr4_3:66939016-66939035 | None:intergenic | 35.0% | |
| ! | TCAAGTTGTCCATGCTAAAA+TGG | + | chr4_3:66939054-66939073 | Msa0657310:CDS | 35.0% |
| !! | AAGAACACTCCATTTTAGCA+TGG | - | chr4_3:66939066-66939085 | None:intergenic | 35.0% |
| TGTTTGGAAATTTGAACCAG+AGG | + | chr4_3:66939086-66939105 | Msa0657310:CDS | 35.0% | |
| GCTAAGAAAAAAGCTGAATC+TGG | - | chr4_3:66939136-66939155 | None:intergenic | 35.0% | |
| TTCAGGTCAAGAAGAATACT+AGG | + | chr4_3:66939230-66939249 | Msa0657310:CDS | 35.0% | |
| TCAGTTTCAACTTCATGTTC+AGG | + | chr4_3:66939289-66939308 | Msa0657310:CDS | 35.0% | |
| CAGTTTCAACTTCATGTTCA+GGG | + | chr4_3:66939290-66939309 | Msa0657310:CDS | 35.0% | |
| AGTTTCAACTTCATGTTCAG+GGG | + | chr4_3:66939291-66939310 | Msa0657310:CDS | 35.0% | |
| !! | CTTCTTGATGGTGATTTCAT+AGG | - | chr4_3:66938519-66938538 | None:intergenic | 35.0% |
| AAGAAATGGAATCAGCAAAC+TGG | + | chr4_3:66938762-66938781 | Msa0657310:CDS | 35.0% | |
| AGAAATGGAATCAGCAAACT+GGG | + | chr4_3:66938763-66938782 | Msa0657310:CDS | 35.0% | |
| !! | AAAACAACGATGACTTGGTT+TGG | - | chr4_3:66938834-66938853 | None:intergenic | 35.0% |
| AAAGCAAAACAACGATGACT+TGG | - | chr4_3:66938839-66938858 | None:intergenic | 35.0% | |
| AACTTGGCAAAAGATGAGTT+TGG | - | chr4_3:66939016-66939035 | None:intergenic | 35.0% | |
| ! | TCAAGTTGTCCATGCTAAAA+TGG | + | chr4_3:66939054-66939073 | Msa0657310:CDS | 35.0% |
| !! | AAGAACACTCCATTTTAGCA+TGG | - | chr4_3:66939066-66939085 | None:intergenic | 35.0% |
| TGTTTGGAAATTTGAACCAG+AGG | + | chr4_3:66939086-66939105 | Msa0657310:CDS | 35.0% | |
| GCTAAGAAAAAAGCTGAATC+TGG | - | chr4_3:66939136-66939155 | None:intergenic | 35.0% | |
| TTCAGGTCAAGAAGAATACT+AGG | + | chr4_3:66939230-66939249 | Msa0657310:CDS | 35.0% | |
| TCAGTTTCAACTTCATGTTC+AGG | + | chr4_3:66939289-66939308 | Msa0657310:CDS | 35.0% | |
| CAGTTTCAACTTCATGTTCA+GGG | + | chr4_3:66939290-66939309 | Msa0657310:CDS | 35.0% | |
| AGTTTCAACTTCATGTTCAG+GGG | + | chr4_3:66939291-66939310 | Msa0657310:CDS | 35.0% | |
| ATCACCATCAAGAAGCTTCA+AGG | + | chr4_3:66938524-66938543 | Msa0657310:CDS | 40.0% | |
| TTCTCCTTGAAGCTTCTTGA+TGG | - | chr4_3:66938531-66938550 | None:intergenic | 40.0% | |
| TGGTGAAAACTGCATTTGGA+TGG | - | chr4_3:66938814-66938833 | None:intergenic | 40.0% | |
| !! | GGTTTGGTGAAAACTGCATT+TGG | - | chr4_3:66938818-66938837 | None:intergenic | 40.0% |
| !! | TTTCTTAGCTTTTGCGGAGA+TGG | + | chr4_3:66939147-66939166 | Msa0657310:CDS | 40.0% |
| GAAGAATACTAGGTTCTCTG+AGG | + | chr4_3:66939240-66939259 | Msa0657310:CDS | 40.0% | |
| !! | TAGGTTCTCTGAGGTTTACA+TGG | + | chr4_3:66939249-66939268 | Msa0657310:CDS | 40.0% |
| ATTCTAATTCCGGCGAGTTT+CGG | + | chr4_3:66939323-66939342 | Msa0657310:CDS | 40.0% | |
| GTCTTACCAATGTTGAAACC+AGG | - | chr4_3:66939367-66939386 | None:intergenic | 40.0% | |
| TAAGACAGTGATACAGAGTC+AGG | + | chr4_3:66939381-66939400 | Msa0657310:CDS | 40.0% | |
| GAGTCAGGTTTATCTGTCTT+TGG | + | chr4_3:66939396-66939415 | Msa0657310:CDS | 40.0% | |
| TCAGGTTTATCTGTCTTTGG+TGG | + | chr4_3:66939399-66939418 | Msa0657310:CDS | 40.0% | |
| ATCACCATCAAGAAGCTTCA+AGG | + | chr4_3:66938524-66938543 | Msa0657310:CDS | 40.0% | |
| TTCTCCTTGAAGCTTCTTGA+TGG | - | chr4_3:66938531-66938550 | None:intergenic | 40.0% | |
| TGGTGAAAACTGCATTTGGA+TGG | - | chr4_3:66938814-66938833 | None:intergenic | 40.0% | |
| !! | GGTTTGGTGAAAACTGCATT+TGG | - | chr4_3:66938818-66938837 | None:intergenic | 40.0% |
| !! | TTTCTTAGCTTTTGCGGAGA+TGG | + | chr4_3:66939147-66939166 | Msa0657310:CDS | 40.0% |
| GAAGAATACTAGGTTCTCTG+AGG | + | chr4_3:66939240-66939259 | Msa0657310:CDS | 40.0% | |
| !! | TAGGTTCTCTGAGGTTTACA+TGG | + | chr4_3:66939249-66939268 | Msa0657310:CDS | 40.0% |
| ATTCTAATTCCGGCGAGTTT+CGG | + | chr4_3:66939323-66939342 | Msa0657310:CDS | 40.0% | |
| GTCTTACCAATGTTGAAACC+AGG | - | chr4_3:66939367-66939386 | None:intergenic | 40.0% | |
| TAAGACAGTGATACAGAGTC+AGG | + | chr4_3:66939381-66939400 | Msa0657310:CDS | 40.0% | |
| GAGTCAGGTTTATCTGTCTT+TGG | + | chr4_3:66939396-66939415 | Msa0657310:CDS | 40.0% | |
| TCAGGTTTATCTGTCTTTGG+TGG | + | chr4_3:66939399-66939418 | Msa0657310:CDS | 40.0% | |
| ! | CAGAATTCACTAGCTTCCTC+TGG | - | chr4_3:66939105-66939124 | None:intergenic | 45.0% |
| CAGAGGAAGCTAGTGAATTC+TGG | + | chr4_3:66939103-66939122 | Msa0657310:CDS | 45.0% | |
| AGGAAGCTAGTGAATTCTGG+AGG | + | chr4_3:66939106-66939125 | Msa0657310:CDS | 45.0% | |
| GGAAGCTAGTGAATTCTGGA+GGG | + | chr4_3:66939107-66939126 | Msa0657310:CDS | 45.0% | |
| CGTTTGGACACTGCATTACT+TGG | + | chr4_3:66939177-66939196 | Msa0657310:CDS | 45.0% | |
| TTCTAATTCCGGCGAGTTTC+GGG | + | chr4_3:66939324-66939343 | Msa0657310:CDS | 45.0% | |
| ! | CAGAATTCACTAGCTTCCTC+TGG | - | chr4_3:66939105-66939124 | None:intergenic | 45.0% |
| CAGAGGAAGCTAGTGAATTC+TGG | + | chr4_3:66939103-66939122 | Msa0657310:CDS | 45.0% | |
| AGGAAGCTAGTGAATTCTGG+AGG | + | chr4_3:66939106-66939125 | Msa0657310:CDS | 45.0% | |
| GGAAGCTAGTGAATTCTGGA+GGG | + | chr4_3:66939107-66939126 | Msa0657310:CDS | 45.0% | |
| CGTTTGGACACTGCATTACT+TGG | + | chr4_3:66939177-66939196 | Msa0657310:CDS | 45.0% | |
| TTCTAATTCCGGCGAGTTTC+GGG | + | chr4_3:66939324-66939343 | Msa0657310:CDS | 45.0% | |
| !! | CGAGTTTCGGGTGGTTTTCA+CGG | + | chr4_3:66939336-66939355 | Msa0657310:CDS | 50.0% |
| GTGGTGCCTGGTTTCAACAT+TGG | + | chr4_3:66939358-66939377 | Msa0657310:CDS | 50.0% | |
| !! | CGAGTTTCGGGTGGTTTTCA+CGG | + | chr4_3:66939336-66939355 | Msa0657310:CDS | 50.0% |
| GTGGTGCCTGGTTTCAACAT+TGG | + | chr4_3:66939358-66939377 | Msa0657310:CDS | 50.0% | |
| TAATTCCGGCGAGTTTCGGG+TGG | + | chr4_3:66939327-66939346 | Msa0657310:CDS | 55.0% | |
| GAAAACCACCCGAAACTCGC+CGG | - | chr4_3:66939335-66939354 | None:intergenic | 55.0% | |
| !! | GTTTCGGGTGGTTTTCACGG+TGG | + | chr4_3:66939339-66939358 | Msa0657310:CDS | 55.0% |
| TAATTCCGGCGAGTTTCGGG+TGG | + | chr4_3:66939327-66939346 | Msa0657310:CDS | 55.0% | |
| GAAAACCACCCGAAACTCGC+CGG | - | chr4_3:66939335-66939354 | None:intergenic | 55.0% | |
| !! | GTTTCGGGTGGTTTTCACGG+TGG | + | chr4_3:66939339-66939358 | Msa0657310:CDS | 55.0% |
| CGGAGATGGCAAAGCGCGTT+TGG | + | chr4_3:66939161-66939180 | Msa0657310:CDS | 60.0% | |
| ! | GTGGTTTTCACGGTGGTGCC+TGG | + | chr4_3:66939346-66939365 | Msa0657310:CDS | 60.0% |
| CGGAGATGGCAAAGCGCGTT+TGG | + | chr4_3:66939161-66939180 | Msa0657310:CDS | 60.0% | |
| ! | GTGGTTTTCACGGTGGTGCC+TGG | + | chr4_3:66939346-66939365 | Msa0657310:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 66938476 | 66939441 | 66938476 | ID=Msa0657310;Name=Msa0657310 |
| chr4_3 | mRNA | 66938476 | 66939441 | 66938476 | ID=Msa0657310-mRNA-1;Parent=Msa0657310;Name=Msa0657310-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|321 |
| chr4_3 | exon | 66938476 | 66939441 | 66938476 | ID=Msa0657310-mRNA-1:exon:19241;Parent=Msa0657310-mRNA-1 |
| chr4_3 | CDS | 66938476 | 66939441 | 66938476 | ID=Msa0657310-mRNA-1:cds;Parent=Msa0657310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
