Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657650 | XP_024636894.1 | 91.139 | 237 | 17 | 1 | 53 | 285 | 1 | 237 | 1.41e-141 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657650 | sp|O48916|FAH1_ARATH | 63.158 | 228 | 80 | 1 | 53 | 276 | 1 | 228 | 1.03e-104 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657650 | A0A1S2YHY3 | 78.481 | 237 | 47 | 1 | 53 | 285 | 2 | 238 | 6.58e-134 | 388 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034560 | Msa0657650 | 0.834497 | 2.896218e-56 | -8.615850e-47 |
| Msa0044240 | Msa0657650 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0090770 | Msa0657650 | 0.807631 | 4.600686e-50 | -8.615850e-47 |
| Msa0657650 | Msa0865990 | 0.821898 | 3.161129e-53 | -8.615850e-47 |
| Msa0657650 | Msa1367620 | 0.811599 | 6.458775e-51 | -8.615850e-47 |
| Msa0657650 | Msa1395230 | 0.811745 | 6.003093e-51 | -8.615850e-47 |
| Msa0183640 | Msa0657650 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657650 | MtrunA17_Chr4g0051591 | 77.215 | 237 | 50 | 1 | 53 | 285 | 1 | 237 | 1.73e-125 | 357 |
| Msa0657650 | MtrunA17_Chr2g0292941 | 67.373 | 236 | 72 | 2 | 53 | 284 | 1 | 235 | 1.65e-116 | 334 |
| Msa0657650 | MtrunA17_Chr4g0051581 | 80.337 | 178 | 27 | 3 | 53 | 225 | 1 | 175 | 1.26e-81 | 243 |
| Msa0657650 | MtrunA17_Chr4g0051571 | 90.909 | 88 | 8 | 0 | 198 | 285 | 9 | 96 | 8.29e-54 | 170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0657650 | AT2G34770.1 | 63.158 | 228 | 80 | 1 | 53 | 276 | 1 | 228 | 1.05e-105 | 307 |
| Msa0657650 | AT4G20870.2 | 60.526 | 228 | 86 | 1 | 53 | 276 | 1 | 228 | 2.74e-101 | 296 |
| Msa0657650 | AT4G20870.1 | 60.526 | 228 | 86 | 1 | 53 | 276 | 1 | 228 | 2.74e-101 | 296 |
Find 93 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTTCATAGCAGTTTCT+TGG | 0.239255 | 4_3:+67439848 | Msa0657650:CDS |
| GTGGATATACCTTGAGATTT+CGG | 0.248273 | 4_3:-67441488 | None:intergenic |
| TGGATATACCTTGAGATTTC+GGG | 0.250489 | 4_3:-67441487 | None:intergenic |
| GGTGGGTGGTTCCAATTGTT+TGG | 0.255867 | 4_3:+67439985 | Msa0657650:CDS |
| GGAGGTTCGGGTTCGGGTTC+CGG | 0.261252 | 4_3:-67438847 | None:intergenic |
| GGGGATGGAGGTTCGGGTTC+GGG | 0.261524 | 4_3:-67438853 | None:intergenic |
| GGCTGCAGGGGATGGAGGTT+CGG | 0.276224 | 4_3:-67438860 | None:intergenic |
| GGGCTTTCCTTGCGCATAAT+AGG | 0.292068 | 4_3:-67439822 | None:intergenic |
| AGGGGATGGAGGTTCGGGTT+CGG | 0.297165 | 4_3:-67438854 | None:intergenic |
| GATCGTCTTCGATTTGAGTA+TGG | 0.300798 | 4_3:-67438825 | None:intergenic |
| AGCTATCCATGGGGTGCTTA+TGG | 0.306686 | 4_3:-67440199 | None:intergenic |
| CGTTTGGCATTTAGCTTTGA+TGG | 0.317191 | 4_3:-67441789 | None:intergenic |
| TGGCGTCACTTCACCACTTT+GGG | 0.322586 | 4_3:+67441740 | Msa0657650:CDS |
| TTTCGGGGTACATGACTCTT+AGG | 0.328014 | 4_3:-67441471 | None:intergenic |
| GTGGGTGGTTCCAATTGTTT+GGG | 0.331386 | 4_3:+67439986 | Msa0657650:CDS |
| GCTGCAGGGGATGGAGGTTC+GGG | 0.333608 | 4_3:-67438859 | None:intergenic |
| ATGTTCAAACTAAGAGCTAT+TGG | 0.342050 | 4_3:+67440141 | Msa0657650:intron |
| AACAGTTACTTATCAACGTT+TGG | 0.358199 | 4_3:-67441805 | None:intergenic |
| TGTTCAAACTAAGAGCTATT+GGG | 0.361825 | 4_3:+67440142 | Msa0657650:intron |
| CATATATAACTCTTTCAGAT+TGG | 0.373329 | 4_3:+67440028 | Msa0657650:CDS |
| TTCTGGGCTGCAGTTCGCTT+CGG | 0.388681 | 4_3:-67438916 | None:intergenic |
| ATATATAACTCTTTCAGATT+GGG | 0.400462 | 4_3:+67440029 | Msa0657650:CDS |
| TTTGTATGGAGGCATATTGT+TGG | 0.400965 | 4_3:+67441401 | Msa0657650:CDS |
| TCAATCGCTCCTGCTTTGTA+TGG | 0.405106 | 4_3:+67441387 | Msa0657650:CDS |
| CACTATCGGGTCGCAAGCCT+TGG | 0.418231 | 4_3:+67441714 | Msa0657650:CDS |
| GCAACTGGTACCCAAACAAT+TGG | 0.420664 | 4_3:-67439996 | None:intergenic |
| TAATAACCTCAAATTTCTCC+TGG | 0.428358 | 4_3:-67438948 | None:intergenic |
| CGGGTCGCAAGCCTTGGTTT+TGG | 0.433777 | 4_3:+67441720 | Msa0657650:CDS |
| TTGGTGAAGATTATGAAGAA+TGG | 0.440055 | 4_3:+67439790 | Msa0657650:CDS |
| CTTTCATAGCAGTTTCTTGG+AGG | 0.442386 | 4_3:+67439851 | Msa0657650:CDS |
| TTGGCGTCACTTCACCACTT+TGG | 0.452111 | 4_3:+67441739 | Msa0657650:CDS |
| CACTTCACCACTTTGGGACA+AGG | 0.453521 | 4_3:+67441746 | Msa0657650:CDS |
| TTGTGACAGGTTGGTCATCT+TGG | 0.455056 | 4_3:+67439771 | Msa0657650:intron |
| GTCCCTTCCGCTTATGTCCA+CGG | 0.457809 | 4_3:-67438894 | None:intergenic |
| CATTGTCCAGTTCTGGCCCT+TGG | 0.460798 | 4_3:+67441344 | Msa0657650:intron |
| TTGTATGGAGGCATATTGTT+GGG | 0.468156 | 4_3:+67441402 | Msa0657650:CDS |
| CGGCGAACAGTAGTGGCTGC+AGG | 0.469965 | 4_3:-67438874 | None:intergenic |
| TGGTGAAGATTATGAAGAAT+GGG | 0.470405 | 4_3:+67439791 | Msa0657650:CDS |
| TTTGAACATGGAAAATAAAA+CGG | 0.472370 | 4_3:-67440127 | None:intergenic |
| ACAGTAGTGGCTGCAGGGGA+TGG | 0.474651 | 4_3:-67438868 | None:intergenic |
| AGCACCCCATGGATAGCTTA+AGG | 0.481547 | 4_3:+67440204 | Msa0657650:CDS |
| ATCACTTGAGTCATCACTAT+CGG | 0.486403 | 4_3:+67441700 | Msa0657650:CDS |
| ATCGTCTTCGATTTGAGTAT+GGG | 0.496621 | 4_3:-67438824 | None:intergenic |
| TACTCAAATCGAAGACGATC+CGG | 0.499565 | 4_3:+67438828 | Msa0657650:CDS |
| TTGAGGTTACTTGGAAAACA+AGG | 0.508075 | 4_3:-67439672 | None:intergenic |
| GGGGTACATGACTCTTAGGT+TGG | 0.510223 | 4_3:-67441467 | None:intergenic |
| GCATTTAGCTTTGATGGTGG+AGG | 0.515418 | 4_3:-67441783 | None:intergenic |
| AACAAGCCTTAAGCTATCCA+TGG | 0.516636 | 4_3:-67440210 | None:intergenic |
| AGCACGAAAAGAGTGATTTG+AGG | 0.518058 | 4_3:-67440062 | None:intergenic |
| ATCGCTCCTGCTTTGTATGG+AGG | 0.518356 | 4_3:+67441390 | Msa0657650:CDS |
| TACCGGAGAGGCAAATAAAA+CGG | 0.522517 | 4_3:-67440249 | None:intergenic |
| CACACGCACCGTTTGGTGGG+TGG | 0.522675 | 4_3:+67439971 | Msa0657650:CDS |
| GCAAATAAAACGGCTGCAGT+TGG | 0.522846 | 4_3:-67440239 | None:intergenic |
| ACACATTACTACTTGCATCA+TGG | 0.523943 | 4_3:+67441444 | Msa0657650:CDS |
| TATATGAAACATGATGCAAC+TGG | 0.524929 | 4_3:-67440011 | None:intergenic |
| TTTCCTTGCGCATAATAGGT+TGG | 0.531613 | 4_3:-67439818 | None:intergenic |
| AATTGGAACCACCCACCAAA+CGG | 0.532374 | 4_3:-67439979 | None:intergenic |
| AGCCCAGAAAAGAAAGTCCC+AGG | 0.534449 | 4_3:+67438930 | Msa0657650:CDS |
| AATAAAACGGCTGCAGTTGG+TGG | 0.536912 | 4_3:-67440236 | None:intergenic |
| GGCGAACAGTAGTGGCTGCA+GGG | 0.540939 | 4_3:-67438873 | None:intergenic |
| TCACTTGAGTCATCACTATC+GGG | 0.548824 | 4_3:+67441701 | Msa0657650:CDS |
| AAAGCAGGAGCGATTGAATG+AGG | 0.553453 | 4_3:-67441381 | None:intergenic |
| CTGTTCGCCGTGGACATAAG+CGG | 0.558490 | 4_3:+67438887 | Msa0657650:CDS |
| ACAAGCCTTAAGCTATCCAT+GGG | 0.562064 | 4_3:-67440209 | None:intergenic |
| TTTCACACGCACCGTTTGGT+GGG | 0.565842 | 4_3:+67439968 | Msa0657650:CDS |
| AAAGTCCCAGGAGAAATTTG+AGG | 0.568707 | 4_3:+67438942 | Msa0657650:CDS |
| GGTGCTTATGGTGGCAACCA+TGG | 0.569213 | 4_3:-67440187 | None:intergenic |
| ATGTCCACGGCGAACAGTAG+TGG | 0.575358 | 4_3:-67438881 | None:intergenic |
| AATAACCTCAAATTTCTCCT+GGG | 0.578422 | 4_3:-67438947 | None:intergenic |
| GTTCAAACTAAGAGCTATTG+GGG | 0.580121 | 4_3:+67440143 | Msa0657650:intron |
| TTGGCATTTAGCTTTGATGG+TGG | 0.587089 | 4_3:-67441786 | None:intergenic |
| AATATGCCTCCATACAAAGC+AGG | 0.596989 | 4_3:-67441396 | None:intergenic |
| GCGAACAGTAGTGGCTGCAG+GGG | 0.599997 | 4_3:-67438872 | None:intergenic |
| TCATGTACCCCGAAATCTCA+AGG | 0.600320 | 4_3:+67441479 | Msa0657650:CDS |
| AAGCAGGAGCGATTGAATGA+GGG | 0.600363 | 4_3:-67441380 | None:intergenic |
| TGAGGTTACTTGGAAAACAA+GGG | 0.607539 | 4_3:-67439671 | None:intergenic |
| CGCCGTGGACATAAGCGGAA+GGG | 0.611078 | 4_3:+67438892 | Msa0657650:CDS |
| TATCCATGGGGTGCTTATGG+TGG | 0.611839 | 4_3:-67440196 | None:intergenic |
| GTAGTGGCTGCAGGGGATGG+AGG | 0.612736 | 4_3:-67438865 | None:intergenic |
| TCACCAACCTATTATGCGCA+AGG | 0.613417 | 4_3:+67439815 | Msa0657650:CDS |
| GAGGTTACTTGGAAAACAAG+GGG | 0.619130 | 4_3:-67439670 | None:intergenic |
| TCTTCGATTTGAGTATGGGT+CGG | 0.625733 | 4_3:-67438820 | None:intergenic |
| AACTGCTATGAAAGAAACGA+GGG | 0.635498 | 4_3:-67439842 | None:intergenic |
| GTGAAGTGACGCCAAAACCA+AGG | 0.637649 | 4_3:-67441731 | None:intergenic |
| TCGCCGTGGACATAAGCGGA+AGG | 0.643804 | 4_3:+67438891 | Msa0657650:CDS |
| AGGGCATACATGCTTCACCA+AGG | 0.655190 | 4_3:-67441361 | None:intergenic |
| GGGCATACATGCTTCACCAA+GGG | 0.656245 | 4_3:-67441360 | None:intergenic |
| GGATATACCTTGAGATTTCG+GGG | 0.661657 | 4_3:-67441486 | None:intergenic |
| TTGCCACCATAAGCACCCCA+TGG | 0.661830 | 4_3:+67440193 | Msa0657650:CDS |
| GCAGCCACTACTGTTCGCCG+TGG | 0.671563 | 4_3:+67438877 | Msa0657650:CDS |
| AAACTGCTATGAAAGAAACG+AGG | 0.699905 | 4_3:-67439843 | None:intergenic |
| TAGAAAGGGGAATACCGGAG+AGG | 0.738018 | 4_3:-67440261 | None:intergenic |
| CAAGCCTTAAGCTATCCATG+GGG | 0.792771 | 4_3:-67440208 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAATACATAAATAG+GGG | + | chr4_3:67440669-67440688 | Msa0657650:intron | 10.0% |
| !! | TAAGAAAAAAAAATCATTAT+TGG | - | chr4_3:67440995-67441014 | None:intergenic | 10.0% |
| !!! | GTTTTAAAATTAAATTGTGA+TGG | - | chr4_3:67439748-67439767 | None:intergenic | 15.0% |
| !!! | ATTAATTATGAATTTTGTGT+TGG | + | chr4_3:67439938-67439957 | Msa0657650:intron | 15.0% |
| !! | TATCATTATTTATGTAGAAA+GGG | - | chr4_3:67440278-67440297 | None:intergenic | 15.0% |
| !! | ATATCATTATTTATGTAGAA+AGG | - | chr4_3:67440279-67440298 | None:intergenic | 15.0% |
| !!! | ATATTATTTTACATACATGT+AGG | + | chr4_3:67440374-67440393 | Msa0657650:intron | 15.0% |
| !! | AAAAATAATACATAAATAGG+GGG | + | chr4_3:67440670-67440689 | Msa0657650:intron | 15.0% |
| !! | AATCTTGAAAAATGTAAAAT+AGG | + | chr4_3:67440697-67440716 | Msa0657650:intron | 15.0% |
| !! | ATCTTGAAAAATGTAAAATA+GGG | + | chr4_3:67440698-67440717 | Msa0657650:intron | 15.0% |
| !!! | TCATAAAAATCATTTTTAAG+AGG | - | chr4_3:67440831-67440850 | None:intergenic | 15.0% |
| !! | AATGACATAATAAAAAGATT+AGG | + | chr4_3:67440908-67440927 | Msa0657650:intron | 15.0% |
| !!! | CTATTATTAGATGTATATTT+TGG | + | chr4_3:67441135-67441154 | Msa0657650:intron | 15.0% |
| !!! | AAAAGTCATTAACTCATTTT+CGG | - | chr4_3:67439492-67439511 | None:intergenic | 20.0% |
| !! | AAATGGAATGTAATAATTTG+AGG | - | chr4_3:67439692-67439711 | None:intergenic | 20.0% |
| !!! | GTTTTGAGGATAAATAAAAA+TGG | - | chr4_3:67439709-67439728 | None:intergenic | 20.0% |
| !! | ATATATAACTCTTTCAGATT+GGG | + | chr4_3:67440029-67440048 | Msa0657650:CDS | 20.0% |
| !! | TTTGAACATGGAAAATAAAA+CGG | - | chr4_3:67440130-67440149 | None:intergenic | 20.0% |
| !! | ATCATTATTTATGTAGAAAG+GGG | - | chr4_3:67440277-67440296 | None:intergenic | 20.0% |
| !!! | ATGATATTCCTTATATTTTG+CGG | + | chr4_3:67440292-67440311 | Msa0657650:intron | 20.0% |
| !!! | GACATGTTTTATTTATTGTT+AGG | - | chr4_3:67440570-67440589 | None:intergenic | 20.0% |
| !! | AAAATAATACATAAATAGGG+GGG | + | chr4_3:67440671-67440690 | Msa0657650:intron | 20.0% |
| !! | TCTTGAAAAATGTAAAATAG+GGG | + | chr4_3:67440699-67440718 | Msa0657650:intron | 20.0% |
| !!! | AAATTCCGAGTTTTAAAATA+GGG | + | chr4_3:67440737-67440756 | Msa0657650:intron | 20.0% |
| !!! | AGAGGTATATTTTTAAAAGA+AGG | - | chr4_3:67440813-67440832 | None:intergenic | 20.0% |
| !! | AAAAGAAATAAGGGTTATAT+GGG | - | chr4_3:67440970-67440989 | None:intergenic | 20.0% |
| !! | TAAAAGAAATAAGGGTTATA+TGG | - | chr4_3:67440971-67440990 | None:intergenic | 20.0% |
| !!! | TTATTGGCTAAAAGAAATAA+GGG | - | chr4_3:67440979-67440998 | None:intergenic | 20.0% |
| !!! | ATTATTGGCTAAAAGAAATA+AGG | - | chr4_3:67440980-67440999 | None:intergenic | 20.0% |
| !! | AAACTAATACTATAGTTGAA+AGG | + | chr4_3:67441076-67441095 | Msa0657650:intron | 20.0% |
| !!! | TTATTAGATGTATATTTTGG+TGG | + | chr4_3:67441138-67441157 | Msa0657650:intron | 20.0% |
| ! | TTATTCTAATGGTAGATCAA+CGG | - | chr4_3:67439405-67439424 | None:intergenic | 25.0% |
| ! | TCTACCATTAGAATAAATGA+AGG | + | chr4_3:67439409-67439428 | Msa0657650:intron | 25.0% |
| ! | CTACCATTAGAATAAATGAA+GGG | + | chr4_3:67439410-67439429 | Msa0657650:intron | 25.0% |
| ! | AAACCCTTCATTTATTCTAA+TGG | - | chr4_3:67439416-67439435 | None:intergenic | 25.0% |
| !! | AAAGTCATTAACTCATTTTC+GGG | - | chr4_3:67439491-67439510 | None:intergenic | 25.0% |
| !!! | CTATAGTGATATTTTTGAAG+AGG | - | chr4_3:67439563-67439582 | None:intergenic | 25.0% |
| !! | ATTTGTCTTTAGTTTCAAGA+TGG | + | chr4_3:67439615-67439634 | Msa0657650:intron | 25.0% |
| !! | TGTAATAATTTGAGGTTACT+TGG | - | chr4_3:67439684-67439703 | None:intergenic | 25.0% |
| !! | CAGTGATTAAAAAAGTTTTG+AGG | - | chr4_3:67439723-67439742 | None:intergenic | 25.0% |
| !!! | ATTTTAAAACACTTTGTGAC+AGG | + | chr4_3:67439758-67439777 | Msa0657650:intron | 25.0% |
| !! | TGTAATGTAACTAGAGTTTT+AGG | - | chr4_3:67439879-67439898 | None:intergenic | 25.0% |
| ! | CATATATAACTCTTTCAGAT+TGG | + | chr4_3:67440028-67440047 | Msa0657650:CDS | 25.0% |
| ! | AATTACAATATTAGAGTGAG+TGG | + | chr4_3:67440432-67440451 | Msa0657650:intron | 25.0% |
| ! | CTTGAAAAATGTAAAATAGG+GGG | + | chr4_3:67440700-67440719 | Msa0657650:intron | 25.0% |
| ! | TTGAAAAATGTAAAATAGGG+GGG | + | chr4_3:67440701-67440720 | Msa0657650:intron | 25.0% |
| !!! | GAAATTCCGAGTTTTAAAAT+AGG | + | chr4_3:67440736-67440755 | Msa0657650:intron | 25.0% |
| !!! | AATTCCGAGTTTTAAAATAG+GGG | + | chr4_3:67440738-67440757 | Msa0657650:intron | 25.0% |
| !! | TCAGAATAATTTCGCATTTT+AGG | + | chr4_3:67440859-67440878 | Msa0657650:intron | 25.0% |
| ! | AAAGAAATAAGGGTTATATG+GGG | - | chr4_3:67440969-67440988 | None:intergenic | 25.0% |
| ! | TGCTTAATGTTTGTAAAAAG+AGG | + | chr4_3:67441299-67441318 | Msa0657650:intron | 25.0% |
| !! | GATCTTGTTATCAAGATAAA+CGG | + | chr4_3:67441561-67441580 | Msa0657650:intron | 25.0% |
| !! | GATTACTTATGATCCTTTTA+AGG | - | chr4_3:67441656-67441675 | None:intergenic | 25.0% |
| AATAACCTCAAATTTCTCCT+GGG | - | chr4_3:67438950-67438969 | None:intergenic | 30.0% | |
| TAATAACCTCAAATTTCTCC+TGG | - | chr4_3:67438951-67438970 | None:intergenic | 30.0% | |
| ! | TACAAAAGGAACAGGTTTTA+GGG | - | chr4_3:67438980-67438999 | None:intergenic | 30.0% |
| AGAACTTTATCAGGTACAAA+AGG | - | chr4_3:67438994-67439013 | None:intergenic | 30.0% | |
| TCAAAGTCAAGAACTTTATC+AGG | - | chr4_3:67439003-67439022 | None:intergenic | 30.0% | |
| TCATGACTACATGTATGATA+AGG | + | chr4_3:67439350-67439369 | Msa0657650:intron | 30.0% | |
| TGTGTATGCTACTGATAAAT+AGG | + | chr4_3:67439524-67439543 | Msa0657650:intron | 30.0% | |
| TTGGTGAAGATTATGAAGAA+TGG | + | chr4_3:67439790-67439809 | Msa0657650:CDS | 30.0% | |
| TGGTGAAGATTATGAAGAAT+GGG | + | chr4_3:67439791-67439810 | Msa0657650:CDS | 30.0% | |
| TTTCTTTCATAGCAGTTTCT+TGG | + | chr4_3:67439848-67439867 | Msa0657650:CDS | 30.0% | |
| TATATGAAACATGATGCAAC+TGG | - | chr4_3:67440014-67440033 | None:intergenic | 30.0% | |
| ! | AATAGCTCTTAGTTTGAACA+TGG | - | chr4_3:67440142-67440161 | None:intergenic | 30.0% |
| ATGTTCAAACTAAGAGCTAT+TGG | + | chr4_3:67440141-67440160 | Msa0657650:intron | 30.0% | |
| TGTTCAAACTAAGAGCTATT+GGG | + | chr4_3:67440142-67440161 | Msa0657650:intron | 30.0% | |
| TAACACATCCGCAAAATATA+AGG | - | chr4_3:67440303-67440322 | None:intergenic | 30.0% | |
| ! | TTTTAGACCTCCAAAAGTTT+TGG | - | chr4_3:67440617-67440636 | None:intergenic | 30.0% |
| TGAAAAATGTAAAATAGGGG+GGG | + | chr4_3:67440702-67440721 | Msa0657650:intron | 30.0% | |
| !!! | ATTCCGAGTTTTAAAATAGG+GGG | + | chr4_3:67440739-67440758 | Msa0657650:intron | 30.0% |
| CGAATATACCTATTACACAA+TGG | + | chr4_3:67440933-67440952 | Msa0657650:intron | 30.0% | |
| ATATACCTATTACACAATGG+AGG | + | chr4_3:67440936-67440955 | Msa0657650:intron | 30.0% | |
| ! | TTGTCTCTAGTGTTATTAGT+GGG | - | chr4_3:67441058-67441077 | None:intergenic | 30.0% |
| ! | TTTGTCTCTAGTGTTATTAG+TGG | - | chr4_3:67441059-67441078 | None:intergenic | 30.0% |
| !!! | TTAGATGTATATTTTGGTGG+AGG | + | chr4_3:67441141-67441160 | Msa0657650:intron | 30.0% |
| ! | CTACATTTTACCCAAACATT+AGG | - | chr4_3:67441189-67441208 | None:intergenic | 30.0% |
| CATTTACATGTATGCGATAT+TGG | + | chr4_3:67441263-67441282 | Msa0657650:intron | 30.0% | |
| TACATTTAAGGAAGAGAAAG+TGG | - | chr4_3:67441510-67441529 | None:intergenic | 30.0% | |
| TAGATTGTCGTCTACATTTA+AGG | - | chr4_3:67441522-67441541 | None:intergenic | 30.0% | |
| ATACTTCTGCAAAATAAGGA+AGG | - | chr4_3:67441682-67441701 | None:intergenic | 30.0% | |
| AGTGATACTTCTGCAAAATA+AGG | - | chr4_3:67441686-67441705 | None:intergenic | 30.0% | |
| ! | ATCGTCTTCGATTTGAGTAT+GGG | - | chr4_3:67438827-67438846 | None:intergenic | 35.0% |
| ! | GTACAAAAGGAACAGGTTTT+AGG | - | chr4_3:67438981-67439000 | None:intergenic | 35.0% |
| TTATCAGGTACAAAAGGAAC+AGG | - | chr4_3:67438988-67439007 | None:intergenic | 35.0% | |
| TGACAGAATCAAACTCAATG+TGG | - | chr4_3:67439071-67439090 | None:intergenic | 35.0% | |
| !! | CATTAACTCATTTTCGGGAA+CGG | - | chr4_3:67439486-67439505 | None:intergenic | 35.0% |
| TGAGGTTACTTGGAAAACAA+GGG | - | chr4_3:67439674-67439693 | None:intergenic | 35.0% | |
| TTGAGGTTACTTGGAAAACA+AGG | - | chr4_3:67439675-67439694 | None:intergenic | 35.0% | |
| TAAAACACTTTGTGACAGGT+TGG | + | chr4_3:67439762-67439781 | Msa0657650:intron | 35.0% | |
| AACTGCTATGAAAGAAACGA+GGG | - | chr4_3:67439845-67439864 | None:intergenic | 35.0% | |
| AAACTGCTATGAAAGAAACG+AGG | - | chr4_3:67439846-67439865 | None:intergenic | 35.0% | |
| ! | TGCTTCTTGGCATTTTTGTA+TGG | + | chr4_3:67440081-67440100 | Msa0657650:CDS | 35.0% |
| GTTCAAACTAAGAGCTATTG+GGG | + | chr4_3:67440143-67440162 | Msa0657650:intron | 35.0% | |
| ! | ACGTTGCATTTTCTTTTCCA+TGG | + | chr4_3:67440170-67440189 | Msa0657650:CDS | 35.0% |
| TTATGTAGAAAGGGGAATAC+CGG | - | chr4_3:67440269-67440288 | None:intergenic | 35.0% | |
| GAAAAATGTAAAATAGGGGG+GGG | + | chr4_3:67440703-67440722 | Msa0657650:intron | 35.0% | |
| AAAAATGTAAAATAGGGGGG+GGG | + | chr4_3:67440704-67440723 | Msa0657650:intron | 35.0% | |
| !!! | TTCCGAGTTTTAAAATAGGG+GGG | + | chr4_3:67440740-67440759 | Msa0657650:intron | 35.0% |
| !!! | TACCCCCCTATTTTAAAACT+CGG | - | chr4_3:67440745-67440764 | None:intergenic | 35.0% |
| ! | AATCCAGGTTGAGTCAAAAT+AGG | + | chr4_3:67440766-67440785 | Msa0657650:intron | 35.0% |
| ! | ATCCAGGTTGAGTCAAAATA+GGG | + | chr4_3:67440767-67440786 | Msa0657650:intron | 35.0% |
| TGTTATTAGTGGGACTATGT+GGG | - | chr4_3:67441048-67441067 | None:intergenic | 35.0% | |
| !!! | ATATTTTGGTGGAGGCATAA+AGG | + | chr4_3:67441149-67441168 | Msa0657650:intron | 35.0% |
| ! | ATTTGGGATGCCTAATGTTT+GGG | + | chr4_3:67441176-67441195 | Msa0657650:intron | 35.0% |
| !!! | ATGTAGCTTGTTTTCGCAAA+TGG | + | chr4_3:67441203-67441222 | Msa0657650:intron | 35.0% |
| ! | TTTGTATGGAGGCATATTGT+TGG | + | chr4_3:67441401-67441420 | Msa0657650:CDS | 35.0% |
| ! | TTGTATGGAGGCATATTGTT+GGG | + | chr4_3:67441402-67441421 | Msa0657650:CDS | 35.0% |
| ACACATTACTACTTGCATCA+TGG | + | chr4_3:67441444-67441463 | Msa0657650:CDS | 35.0% | |
| TGGATATACCTTGAGATTTC+GGG | - | chr4_3:67441490-67441509 | None:intergenic | 35.0% | |
| GTGGATATACCTTGAGATTT+CGG | - | chr4_3:67441491-67441510 | None:intergenic | 35.0% | |
| TAAATCGTGCAAGCCTTAAA+AGG | + | chr4_3:67441640-67441659 | Msa0657650:intron | 35.0% | |
| ATCACTTGAGTCATCACTAT+CGG | + | chr4_3:67441700-67441719 | Msa0657650:CDS | 35.0% | |
| ! | TCTTCGATTTGAGTATGGGT+CGG | - | chr4_3:67438823-67438842 | None:intergenic | 40.0% |
| ! | GATCGTCTTCGATTTGAGTA+TGG | - | chr4_3:67438828-67438847 | None:intergenic | 40.0% |
| TACTCAAATCGAAGACGATC+CGG | + | chr4_3:67438828-67438847 | Msa0657650:CDS | 40.0% | |
| AAAGTCCCAGGAGAAATTTG+AGG | + | chr4_3:67438942-67438961 | Msa0657650:CDS | 40.0% | |
| TGAGAGTCATAAAAGCCTGT+TGG | + | chr4_3:67439020-67439039 | Msa0657650:intron | 40.0% | |
| TAAAAGCCTGTTGGAACGTT+TGG | + | chr4_3:67439029-67439048 | Msa0657650:intron | 40.0% | |
| AAAAGCCTGTTGGAACGTTT+GGG | + | chr4_3:67439030-67439049 | Msa0657650:intron | 40.0% | |
| ATCGACATGTCTTCTAAGCT+TGG | + | chr4_3:67439308-67439327 | Msa0657650:intron | 40.0% | |
| TTCTAAGCTTGGTCAAGTAG+CGG | + | chr4_3:67439319-67439338 | Msa0657650:intron | 40.0% | |
| GAAGGGTTTAGATTTGTCAC+AGG | + | chr4_3:67439427-67439446 | Msa0657650:intron | 40.0% | |
| GATTTGTCACAGGAGAAAAC+AGG | + | chr4_3:67439437-67439456 | Msa0657650:intron | 40.0% | |
| AAACAGGAGAGAAAACACAC+TGG | + | chr4_3:67439453-67439472 | Msa0657650:intron | 40.0% | |
| GAGGTTACTTGGAAAACAAG+GGG | - | chr4_3:67439673-67439692 | None:intergenic | 40.0% | |
| TTTCCTTGCGCATAATAGGT+TGG | - | chr4_3:67439821-67439840 | None:intergenic | 40.0% | |
| CTTTCATAGCAGTTTCTTGG+AGG | + | chr4_3:67439851-67439870 | Msa0657650:CDS | 40.0% | |
| AGCACGAAAAGAGTGATTTG+AGG | - | chr4_3:67440065-67440084 | None:intergenic | 40.0% | |
| ! | ATCACTCTTTTCGTGCTTCT+TGG | + | chr4_3:67440068-67440087 | Msa0657650:CDS | 40.0% |
| ACAAGCCTTAAGCTATCCAT+GGG | - | chr4_3:67440212-67440231 | None:intergenic | 40.0% | |
| AACAAGCCTTAAGCTATCCA+TGG | - | chr4_3:67440213-67440232 | None:intergenic | 40.0% | |
| TACCGGAGAGGCAAATAAAA+CGG | - | chr4_3:67440252-67440271 | None:intergenic | 40.0% | |
| ACTAACGTGTTGAATCGTGA+TGG | - | chr4_3:67440479-67440498 | None:intergenic | 40.0% | |
| GATCAACTATGTCGAGTTCA+TGG | + | chr4_3:67440538-67440557 | Msa0657650:intron | 40.0% | |
| ! | ATGTCTTTGTTTCCCCGAAT+CGG | + | chr4_3:67440585-67440604 | Msa0657650:intron | 40.0% |
| !! | AGTTTTGGTCCATTCCGATT+CGG | - | chr4_3:67440602-67440621 | None:intergenic | 40.0% |
| ! | TCGGAATGGACCAAAACTTT+TGG | + | chr4_3:67440604-67440623 | Msa0657650:intron | 40.0% |
| ! | GAATGGACCAAAACTTTTGG+AGG | + | chr4_3:67440607-67440626 | Msa0657650:intron | 40.0% |
| AAAATGTAAAATAGGGGGGG+GGG | + | chr4_3:67440705-67440724 | Msa0657650:intron | 40.0% | |
| AAAATAGGGGGGTAAAATCC+AGG | + | chr4_3:67440751-67440770 | Msa0657650:intron | 40.0% | |
| ! | TCCAGGTTGAGTCAAAATAG+GGG | + | chr4_3:67440768-67440787 | Msa0657650:intron | 40.0% |
| ACGTCACTATATTTGACGTG+GGG | - | chr4_3:67441024-67441043 | None:intergenic | 40.0% | |
| GACGTCACTATATTTGACGT+GGG | - | chr4_3:67441025-67441044 | None:intergenic | 40.0% | |
| GTTATTAGTGGGACTATGTG+GGG | - | chr4_3:67441047-67441066 | None:intergenic | 40.0% | |
| ! | GTGTTATTAGTGGGACTATG+TGG | - | chr4_3:67441049-67441068 | None:intergenic | 40.0% |
| ! | GTTGAAAGGAGTTTTTGCTG+TGG | + | chr4_3:67441090-67441109 | Msa0657650:intron | 40.0% |
| GAGGCATAAAGGAAGGATTT+GGG | + | chr4_3:67441160-67441179 | Msa0657650:intron | 40.0% | |
| ! | GATTTGGGATGCCTAATGTT+TGG | + | chr4_3:67441175-67441194 | Msa0657650:intron | 40.0% |
| AATATGCCTCCATACAAAGC+AGG | - | chr4_3:67441399-67441418 | None:intergenic | 40.0% | |
| GGATATACCTTGAGATTTCG+GGG | - | chr4_3:67441489-67441508 | None:intergenic | 40.0% | |
| TCACTTGAGTCATCACTATC+GGG | + | chr4_3:67441701-67441720 | Msa0657650:CDS | 40.0% | |
| !! | TTGGCATTTAGCTTTGATGG+TGG | - | chr4_3:67441789-67441808 | None:intergenic | 40.0% |
| !! | CGTTTGGCATTTAGCTTTGA+TGG | - | chr4_3:67441792-67441811 | None:intergenic | 40.0% |
| ! | CTCCTGGGACTTTCTTTTCT+GGG | - | chr4_3:67438935-67438954 | None:intergenic | 45.0% |
| ! | TCTCCTGGGACTTTCTTTTC+TGG | - | chr4_3:67438936-67438955 | None:intergenic | 45.0% |
| AAAGCCTGTTGGAACGTTTG+GGG | + | chr4_3:67439031-67439050 | Msa0657650:intron | 45.0% | |
| TCGCAAAGATCTTGTTGCTC+AGG | + | chr4_3:67439092-67439111 | Msa0657650:intron | 45.0% | |
| !! | TTGTGACAGGTTGGTCATCT+TGG | + | chr4_3:67439771-67439790 | Msa0657650:intron | 45.0% |
| TCACCAACCTATTATGCGCA+AGG | + | chr4_3:67439815-67439834 | Msa0657650:CDS | 45.0% | |
| ! | AGTTTTTCACACGCACCGTT+TGG | + | chr4_3:67439964-67439983 | Msa0657650:intron | 45.0% |
| AATTGGAACCACCCACCAAA+CGG | - | chr4_3:67439982-67440001 | None:intergenic | 45.0% | |
| GTGGGTGGTTCCAATTGTTT+GGG | + | chr4_3:67439986-67440005 | Msa0657650:CDS | 45.0% | |
| GCAACTGGTACCCAAACAAT+TGG | - | chr4_3:67439999-67440018 | None:intergenic | 45.0% | |
| CAAGCCTTAAGCTATCCATG+GGG | - | chr4_3:67440211-67440230 | None:intergenic | 45.0% | |
| AATAAAACGGCTGCAGTTGG+TGG | - | chr4_3:67440239-67440258 | None:intergenic | 45.0% | |
| GCAAATAAAACGGCTGCAGT+TGG | - | chr4_3:67440242-67440261 | None:intergenic | 45.0% | |
| !!! | AGCCGTTTTATTTGCCTCTC+CGG | + | chr4_3:67440247-67440266 | Msa0657650:CDS | 45.0% |
| GAGTGAGTGGTGAAATGCAA+AGG | + | chr4_3:67440445-67440464 | Msa0657650:intron | 45.0% | |
| TTTGTTTCCCCGAATCGGAA+TGG | + | chr4_3:67440590-67440609 | Msa0657650:intron | 45.0% | |
| !! | TTTTGGTCCATTCCGATTCG+GGG | - | chr4_3:67440600-67440619 | None:intergenic | 45.0% |
| !! | GTTTTGGTCCATTCCGATTC+GGG | - | chr4_3:67440601-67440620 | None:intergenic | 45.0% |
| AAATGTAAAATAGGGGGGGG+GGG | + | chr4_3:67440706-67440725 | Msa0657650:intron | 45.0% | |
| ! | CCAGGTTGAGTCAAAATAGG+GGG | + | chr4_3:67440769-67440788 | Msa0657650:intron | 45.0% |
| ! | CAGGTTGAGTCAAAATAGGG+GGG | + | chr4_3:67440770-67440789 | Msa0657650:intron | 45.0% |
| AGGTTGAGTCAAAATAGGGG+GGG | + | chr4_3:67440771-67440790 | Msa0657650:intron | 45.0% | |
| AGCTGCCTCCATTGTGTAAT+AGG | - | chr4_3:67440944-67440963 | None:intergenic | 45.0% | |
| GGACGTCACTATATTTGACG+TGG | - | chr4_3:67441026-67441045 | None:intergenic | 45.0% | |
| ! | TTTGGTGGAGGCATAAAGGA+AGG | + | chr4_3:67441153-67441172 | Msa0657650:intron | 45.0% |
| ! | GGAGGCATAAAGGAAGGATT+TGG | + | chr4_3:67441159-67441178 | Msa0657650:intron | 45.0% |
| TTGTGTGCATTGTCCAGTTC+TGG | + | chr4_3:67441337-67441356 | Msa0657650:intron | 45.0% | |
| AAGCAGGAGCGATTGAATGA+GGG | - | chr4_3:67441383-67441402 | None:intergenic | 45.0% | |
| AAAGCAGGAGCGATTGAATG+AGG | - | chr4_3:67441384-67441403 | None:intergenic | 45.0% | |
| TCAATCGCTCCTGCTTTGTA+TGG | + | chr4_3:67441387-67441406 | Msa0657650:CDS | 45.0% | |
| TTTCGGGGTACATGACTCTT+AGG | - | chr4_3:67441474-67441493 | None:intergenic | 45.0% | |
| TCATGTACCCCGAAATCTCA+AGG | + | chr4_3:67441479-67441498 | Msa0657650:CDS | 45.0% | |
| CCAAAAACCTTGTCCCAAAG+TGG | - | chr4_3:67441756-67441775 | None:intergenic | 45.0% | |
| !!! | CCACTTTGGGACAAGGTTTT+TGG | + | chr4_3:67441753-67441772 | Msa0657650:CDS | 45.0% |
| !! | GCATTTAGCTTTGATGGTGG+AGG | - | chr4_3:67441786-67441805 | None:intergenic | 45.0% |
| !!! | NNATTTATATATTTTCAAAA+AGG | + | chr4_3:67439238-67439257 | Msa0657650:intron | 5.0% |
| !! | ATAAAAAATAATACATAAAT+AGG | + | chr4_3:67440667-67440686 | Msa0657650:intron | 5.0% |
| !! | TAAAAAATAATACATAAATA+GGG | + | chr4_3:67440668-67440687 | Msa0657650:intron | 5.0% |
| AGCCCAGAAAAGAAAGTCCC+AGG | + | chr4_3:67438930-67438949 | Msa0657650:CDS | 50.0% | |
| ACAACCCCAAACGTTCCAAC+AGG | - | chr4_3:67439038-67439057 | None:intergenic | 50.0% | |
| ! | TGTTGGAACGTTTGGGGTTG+TGG | + | chr4_3:67439037-67439056 | Msa0657650:intron | 50.0% |
| ! | GTTGGAACGTTTGGGGTTGT+GGG | + | chr4_3:67439038-67439057 | Msa0657650:intron | 50.0% |
| ! | TTGGAACGTTTGGGGTTGTG+GGG | + | chr4_3:67439039-67439058 | Msa0657650:intron | 50.0% |
| TAAGCTTGGTCAAGTAGCGG+TGG | + | chr4_3:67439322-67439341 | Msa0657650:intron | 50.0% | |
| GGGCTTTCCTTGCGCATAAT+AGG | - | chr4_3:67439825-67439844 | None:intergenic | 50.0% | |
| ! | TTTTCACACGCACCGTTTGG+TGG | + | chr4_3:67439967-67439986 | Msa0657650:CDS | 50.0% |
| TTTCACACGCACCGTTTGGT+GGG | + | chr4_3:67439968-67439987 | Msa0657650:CDS | 50.0% | |
| GGTGGGTGGTTCCAATTGTT+TGG | + | chr4_3:67439985-67440004 | Msa0657650:CDS | 50.0% | |
| ! | TATCCATGGGGTGCTTATGG+TGG | - | chr4_3:67440199-67440218 | None:intergenic | 50.0% |
| ! | AGCTATCCATGGGGTGCTTA+TGG | - | chr4_3:67440202-67440221 | None:intergenic | 50.0% |
| AGCACCCCATGGATAGCTTA+AGG | + | chr4_3:67440204-67440223 | Msa0657650:CDS | 50.0% | |
| TAGAAAGGGGAATACCGGAG+AGG | - | chr4_3:67440264-67440283 | None:intergenic | 50.0% | |
| AATGTAAAATAGGGGGGGGG+GGG | + | chr4_3:67440707-67440726 | Msa0657650:intron | 50.0% | |
| !!! | CCCCCTATTTTGACTCAACC+TGG | - | chr4_3:67440772-67440791 | None:intergenic | 50.0% |
| GGGCATACATGCTTCACCAA+GGG | - | chr4_3:67441363-67441382 | None:intergenic | 50.0% | |
| AGGGCATACATGCTTCACCA+AGG | - | chr4_3:67441364-67441383 | None:intergenic | 50.0% | |
| ATCGCTCCTGCTTTGTATGG+AGG | + | chr4_3:67441390-67441409 | Msa0657650:CDS | 50.0% | |
| GGGGTACATGACTCTTAGGT+TGG | - | chr4_3:67441470-67441489 | None:intergenic | 50.0% | |
| GTGAAGTGACGCCAAAACCA+AGG | - | chr4_3:67441734-67441753 | None:intergenic | 50.0% | |
| TTGGCGTCACTTCACCACTT+TGG | + | chr4_3:67441739-67441758 | Msa0657650:CDS | 50.0% | |
| TGGCGTCACTTCACCACTTT+GGG | + | chr4_3:67441740-67441759 | Msa0657650:CDS | 50.0% | |
| !! | CACTTCACCACTTTGGGACA+AGG | + | chr4_3:67441746-67441765 | Msa0657650:CDS | 50.0% |
| ATGTCCACGGCGAACAGTAG+TGG | - | chr4_3:67438884-67438903 | None:intergenic | 55.0% | |
| CTGTTCGCCGTGGACATAAG+CGG | + | chr4_3:67438887-67438906 | Msa0657650:CDS | 55.0% | |
| GTCCCTTCCGCTTATGTCCA+CGG | - | chr4_3:67438897-67438916 | None:intergenic | 55.0% | |
| TTCTGGGCTGCAGTTCGCTT+CGG | - | chr4_3:67438919-67438938 | None:intergenic | 55.0% | |
| CTTGGTCAAGTAGCGGTGGA+CGG | + | chr4_3:67439326-67439345 | Msa0657650:intron | 55.0% | |
| GGTGCTTATGGTGGCAACCA+TGG | - | chr4_3:67440190-67440209 | None:intergenic | 55.0% | |
| TTGCCACCATAAGCACCCCA+TGG | + | chr4_3:67440193-67440212 | Msa0657650:CDS | 55.0% | |
| ATGTAAAATAGGGGGGGGGG+GGG | + | chr4_3:67440708-67440727 | Msa0657650:intron | 55.0% | |
| ! | CATTGTCCAGTTCTGGCCCT+TGG | + | chr4_3:67441344-67441363 | Msa0657650:intron | 55.0% |
| ! | AGGGGATGGAGGTTCGGGTT+CGG | - | chr4_3:67438857-67438876 | None:intergenic | 60.0% |
| ACAGTAGTGGCTGCAGGGGA+TGG | - | chr4_3:67438871-67438890 | None:intergenic | 60.0% | |
| GCGAACAGTAGTGGCTGCAG+GGG | - | chr4_3:67438875-67438894 | None:intergenic | 60.0% | |
| GGCGAACAGTAGTGGCTGCA+GGG | - | chr4_3:67438876-67438895 | None:intergenic | 60.0% | |
| TCGCCGTGGACATAAGCGGA+AGG | + | chr4_3:67438891-67438910 | Msa0657650:CDS | 60.0% | |
| CGCCGTGGACATAAGCGGAA+GGG | + | chr4_3:67438892-67438911 | Msa0657650:CDS | 60.0% | |
| TGTAAAATAGGGGGGGGGGG+GGG | + | chr4_3:67440709-67440728 | Msa0657650:intron | 60.0% | |
| GCTTCACCAAGGGCCAGAAC+TGG | - | chr4_3:67441353-67441372 | None:intergenic | 60.0% | |
| CACTATCGGGTCGCAAGCCT+TGG | + | chr4_3:67441714-67441733 | Msa0657650:CDS | 60.0% | |
| ! | CGGGTCGCAAGCCTTGGTTT+TGG | + | chr4_3:67441720-67441739 | Msa0657650:CDS | 60.0% |
| ! | GGAGGTTCGGGTTCGGGTTC+CGG | - | chr4_3:67438850-67438869 | None:intergenic | 65.0% |
| ! | GGGGATGGAGGTTCGGGTTC+GGG | - | chr4_3:67438856-67438875 | None:intergenic | 65.0% |
| GCTGCAGGGGATGGAGGTTC+GGG | - | chr4_3:67438862-67438881 | None:intergenic | 65.0% | |
| GGCTGCAGGGGATGGAGGTT+CGG | - | chr4_3:67438863-67438882 | None:intergenic | 65.0% | |
| GTAGTGGCTGCAGGGGATGG+AGG | - | chr4_3:67438868-67438887 | None:intergenic | 65.0% | |
| CGGCGAACAGTAGTGGCTGC+AGG | - | chr4_3:67438877-67438896 | None:intergenic | 65.0% | |
| GCAGCCACTACTGTTCGCCG+TGG | + | chr4_3:67438877-67438896 | Msa0657650:CDS | 65.0% | |
| ! | CACACGCACCGTTTGGTGGG+TGG | + | chr4_3:67439971-67439990 | Msa0657650:CDS | 65.0% |
| GTAAAATAGGGGGGGGGGGG+GGG | + | chr4_3:67440710-67440729 | Msa0657650:intron | 65.0% | |
| TAAAATAGGGGGGGGGGGGG+GGG | + | chr4_3:67440711-67440730 | Msa0657650:intron | 65.0% | |
| AAAATAGGGGGGGGGGGGGG+GGG | + | chr4_3:67440712-67440731 | Msa0657650:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 67438808 | 67441815 | 67438808 | ID=Msa0657650;Name=Msa0657650 |
| chr4_3 | mRNA | 67438808 | 67441815 | 67438808 | ID=Msa0657650-mRNA-1;Parent=Msa0657650;Name=Msa0657650-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|0.85|0.5|0.57|7|0|285 |
| chr4_3 | exon | 67438808 | 67438963 | 67438808 | ID=Msa0657650-mRNA-1:exon:19403;Parent=Msa0657650-mRNA-1 |
| chr4_3 | exon | 67439634 | 67439684 | 67439634 | ID=Msa0657650-mRNA-1:exon:19404;Parent=Msa0657650-mRNA-1 |
| chr4_3 | exon | 67439780 | 67439872 | 67439780 | ID=Msa0657650-mRNA-1:exon:19405;Parent=Msa0657650-mRNA-1 |
| chr4_3 | exon | 67439966 | 67440142 | 67439966 | ID=Msa0657650-mRNA-1:exon:19406;Parent=Msa0657650-mRNA-1 |
| chr4_3 | exon | 67440155 | 67440268 | 67440155 | ID=Msa0657650-mRNA-1:exon:19407;Parent=Msa0657650-mRNA-1 |
| chr4_3 | exon | 67441354 | 67441500 | 67441354 | ID=Msa0657650-mRNA-1:exon:19408;Parent=Msa0657650-mRNA-1 |
| chr4_3 | exon | 67441696 | 67441815 | 67441696 | ID=Msa0657650-mRNA-1:exon:19409;Parent=Msa0657650-mRNA-1 |
| chr4_3 | CDS | 67438808 | 67438963 | 67438808 | ID=Msa0657650-mRNA-1:cds;Parent=Msa0657650-mRNA-1 |
| chr4_3 | CDS | 67439634 | 67439684 | 67439634 | ID=Msa0657650-mRNA-1:cds;Parent=Msa0657650-mRNA-1 |
| chr4_3 | CDS | 67439780 | 67439872 | 67439780 | ID=Msa0657650-mRNA-1:cds;Parent=Msa0657650-mRNA-1 |
| chr4_3 | CDS | 67439966 | 67440142 | 67439966 | ID=Msa0657650-mRNA-1:cds;Parent=Msa0657650-mRNA-1 |
| chr4_3 | CDS | 67440155 | 67440268 | 67440155 | ID=Msa0657650-mRNA-1:cds;Parent=Msa0657650-mRNA-1 |
| chr4_3 | CDS | 67441354 | 67441500 | 67441354 | ID=Msa0657650-mRNA-1:cds;Parent=Msa0657650-mRNA-1 |
| chr4_3 | CDS | 67441696 | 67441815 | 67441696 | ID=Msa0657650-mRNA-1:cds;Parent=Msa0657650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
