AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0034560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034560 MtrunA17_Chr1g0196931 92.571 1373 79 4 1 1373 1 1350 0.0 2196
Msa0034560 MtrunA17_Chr1g0170381 48.549 1413 520 41 18 1373 19 1281 0.0 914
Msa0034560 MtrunA17_Chr2g0313971 27.059 510 275 21 10 480 8 459 5.90e-21 99.8
Msa0034560 MtrunA17_Chr7g0227611 27.362 508 283 18 10 480 12 470 7.48e-21 99.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034560 AT3G10650.1 40.415 626 287 23 2 611 4 559 3.10e-95 335
Msa0034560 AT3G10650.2 40.415 626 287 23 2 611 4 559 3.10e-95 335
Msa0034560 AT5G20200.1 28.713 505 283 25 13 480 22 486 1.31e-19 95.9

Find 363 sgRNAs with CRISPR-Local

Find 698 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAAACGCAGGGCAAATT+AGG 0.154393 1_1:-62614112 None:intergenic
CAACCCAGCAATTCTCTATT+TGG 0.157350 1_1:+62622553 Msa0034560:CDS
GGCACAGGCTCTAGTTTATT+TGG 0.168016 1_1:+62622517 Msa0034560:CDS
GGCTCCAGCTCACCTCTTTC+TGG 0.182639 1_1:+62619375 Msa0034560:CDS
GCCAAATCAGCTCCAGTATT+TGG 0.202556 1_1:+62620693 Msa0034560:CDS
TCAAATAGTATATTCAAATT+TGG 0.212123 1_1:+62621638 Msa0034560:CDS
CCTTCTCCATTTCAGGCTTC+TGG 0.214633 1_1:+62623024 Msa0034560:CDS
AAAACACCCACCGTAGAAAA+TGG 0.222586 1_1:+62618239 Msa0034560:CDS
ACAGAACCCTTCTCCATTTC+AGG 0.224310 1_1:+62623017 Msa0034560:CDS
GCACAGGCTCTAGTTTATTT+GGG 0.225365 1_1:+62622518 Msa0034560:CDS
CCTCCTGCTCCTAATTCTTC+AGG 0.247439 1_1:+62614403 Msa0034560:CDS
AACAGTTCAAATCAAAATAA+TGG 0.254853 1_1:+62621749 Msa0034560:CDS
AATAATTTGGATGGCACATT+TGG 0.263943 1_1:+62619756 Msa0034560:CDS
GGTAAGACAGATATTTCTTC+TGG 0.266025 1_1:+62622337 Msa0034560:CDS
ACTGATGATGAAGCAGTAAA+TGG 0.266634 1_1:-62620804 None:intergenic
CATAGTTCAAATCAAAATAA+TGG 0.267600 1_1:+62621662 Msa0034560:CDS
ACCAAATACTGGAGCTGATT+TGG 0.272943 1_1:-62620694 None:intergenic
ACCTCCACACAGCCTGCTTT+TGG 0.283989 1_1:+62622712 Msa0034560:CDS
TCTGCATCATCCCCATTGTT+TGG 0.293412 1_1:+62622307 Msa0034560:CDS
GGTTTATCTGTATCATCTTC+TGG 0.293884 1_1:+62622028 Msa0034560:CDS
GGCTCAAAACCACTGGAAAC+TGG 0.296758 1_1:+62622049 Msa0034560:CDS
CAGTTTACAAGGAAATAATT+TGG 0.305513 1_1:+62619743 Msa0034560:CDS
AAGTGAAAACCTGAAGAATT+AGG 0.307099 1_1:-62614412 None:intergenic
CTTGGCACAATCGACATAAT+AGG 0.318751 1_1:-62618872 None:intergenic
TCATCACCTTTGTCCGGGTT+TGG 0.321223 1_1:+62622589 Msa0034560:CDS
CAGATCTGCCACGAGGTCTT+GGG 0.321908 1_1:-62618940 None:intergenic
CAACCGTTGTTGTTGCTGTT+AGG 0.323275 1_1:-62614286 None:intergenic
TTCAATTCCGGTACAACATT+TGG 0.329522 1_1:+62622451 Msa0034560:CDS
AATTTGAATATACTATTTGA+TGG 0.330895 1_1:-62621635 None:intergenic
TTTGGAGCATCCACTCATTC+AGG 0.334633 1_1:+62622889 Msa0034560:CDS
TCACAGGTTTCCACTCCTTC+AGG 0.336019 1_1:+62622952 Msa0034560:CDS
GAACCAAAAGTTGTTATTGT+AGG 0.338830 1_1:-62620555 None:intergenic
GACTTGATTGCTTGACTTTG+TGG 0.340249 1_1:-62619901 None:intergenic
GCACCTACAATAACAACTTT+TGG 0.344412 1_1:+62620552 Msa0034560:CDS
TGCAGCTTTACTACTGTTGC+TGG 0.345071 1_1:+62621482 Msa0034560:intron
ATTGCGGACAAAGTTTCTTC+TGG 0.345155 1_1:+62620384 Msa0034560:CDS
ACTACTGTTGCTGGTTCAAC+TGG 0.346357 1_1:+62621491 Msa0034560:CDS
GCAGATCTGCCACGAGGTCT+TGG 0.347787 1_1:-62618941 None:intergenic
AGCCAGTCTCAGAGTTCTTT+CGG 0.349549 1_1:+62622196 Msa0034560:CDS
CTCATCTGATCATTATTAAC+TGG 0.351705 1_1:-62622769 None:intergenic
ATTTCAGGCTTCTGGCAGTC+TGG 0.356218 1_1:+62623032 Msa0034560:CDS
CCTAACCCTGTCTTTGCGTT+TGG 0.356432 1_1:+62622739 Msa0034560:CDS
GGTGGCGGGCTTGCTGTTCA+TGG 0.357741 1_1:+62619103 Msa0034560:CDS
TGTTCTGTTGACTTGCAAAC+TGG 0.358081 1_1:-62622924 None:intergenic
TTGGCACAATCGACATAATA+GGG 0.359317 1_1:-62618871 None:intergenic
AATACAAAATTTGATTGAAC+CGG 0.366460 1_1:-62622868 None:intergenic
TCAAAAGAAGCACCAAATTT+CGG 0.367481 1_1:-62620843 None:intergenic
ATGGATCATGCCATGTTTAC+CGG 0.372661 1_1:+62619154 Msa0034560:CDS
GCTGCCAGTGGTTCTCTGTT+TGG 0.373016 1_1:+62622220 Msa0034560:CDS
AACCGTTGTTGTTGCTGTTA+GGG 0.374742 1_1:-62614285 None:intergenic
ATCAGCTCCAGTATTTGGTT+TGG 0.375588 1_1:+62620698 Msa0034560:CDS
AAGAGGTGAGCTGGAGCCTT+TGG 0.380963 1_1:-62619370 None:intergenic
CTGCATCATCCCCATTGTTT+GGG 0.382516 1_1:+62622308 Msa0034560:CDS
GACTGTAGATGCAGCTGTTA+GGG 0.382610 1_1:+62618145 Msa0034560:CDS
CCAAACGCAAAGACAGGGTT+AGG 0.384061 1_1:-62622739 None:intergenic
AATAATGGGTCCCTTGCTTC+AGG 0.384444 1_1:+62621764 Msa0034560:CDS
TGCAAACGCAGGGCAAATTA+GGG 0.389445 1_1:-62614111 None:intergenic
GGACTGTAGATGCAGCTGTT+AGG 0.389508 1_1:+62618144 Msa0034560:CDS
TCCTTTCCTGTCACATCAGC+AGG 0.390669 1_1:+62622007 Msa0034560:CDS
GGTGAGTCTACTCCGAAATT+TGG 0.393110 1_1:+62620831 Msa0034560:CDS
TCCAGAGAATTCTTTAATAG+AGG 0.394157 1_1:-62620291 None:intergenic
TACAATAGGAACCGATTCAT+TGG 0.400103 1_1:-62619865 None:intergenic
GGAACCAAATAGAGAATTGC+TGG 0.400476 1_1:-62622557 None:intergenic
GGATTAGCAGTTGACCCATT+TGG 0.402733 1_1:-62620594 None:intergenic
CAGATCTGCAATTTATAGTA+TGG 0.405026 1_1:+62618955 Msa0034560:CDS
GTTGGATAAATTCTGGTATA+CGG 0.406709 1_1:-62618986 None:intergenic
TTAGCAACGGATAATAATAT+AGG 0.410557 1_1:+62619297 Msa0034560:CDS
ACAGTTCAAATCAAAATAAT+GGG 0.411948 1_1:+62621750 Msa0034560:CDS
TTTAGTTCATCACCTTTGTC+CGG 0.413750 1_1:+62622583 Msa0034560:CDS
TTAACTTTATCTAGCAGAAC+AGG 0.416107 1_1:-62619471 None:intergenic
GCCTGTCCACGTAGCATTGA+AGG 0.417676 1_1:-62619678 None:intergenic
AATCAAAATAATGGGTCTCT+TGG 0.417923 1_1:+62621671 Msa0034560:CDS
AATAATGGGTCTCTTGGTTC+AGG 0.418508 1_1:+62621677 Msa0034560:CDS
ATACCTCGTGTGCACTCATA+TGG 0.418721 1_1:-62619989 None:intergenic
ATAGTTCAAATCAAAATAAT+GGG 0.419081 1_1:+62621663 Msa0034560:CDS
AGTAGAGGTTGGATAAATTC+TGG 0.421178 1_1:-62618993 None:intergenic
ACCTTCTCCAAACCAAATAC+TGG 0.421364 1_1:-62620705 None:intergenic
TCAACAGAACATTGCTTCAC+AGG 0.421946 1_1:+62622936 Msa0034560:CDS
TGTTCTGTTGACTAGCAAAC+TGG 0.425438 1_1:-62622987 None:intergenic
TCACATACACTGGAAGTAAC+AGG 0.425521 1_1:-62618290 None:intergenic
CTCAGCCGGGAGGCTCAATC+AGG 0.426421 1_1:+62620868 Msa0034560:CDS
GGTGAAGCAACATCCTCAAT+AGG 0.426725 1_1:-62618719 None:intergenic
GGTAGATGCGTCAAAATTGC+CGG 0.431208 1_1:+62619719 Msa0034560:CDS
GACAAGCCTGCATTACCAAA+TGG 0.432758 1_1:+62620579 Msa0034560:CDS
GAAGAAGCAACAAGTTTCAA+TGG 0.435176 1_1:-62619843 None:intergenic
AATATTACCTTCTGGACAAA+AGG 0.436119 1_1:+62618205 Msa0034560:CDS
TGTTGCTTCTTCCAATGAAT+CGG 0.436206 1_1:+62619854 Msa0034560:CDS
GATTGTTCTGACTCGGATCA+AGG 0.437542 1_1:+62617410 Msa0034560:CDS
TCCCCATTGTTTGGGTCGAC+TGG 0.438863 1_1:+62622316 Msa0034560:CDS
TTCTGCGGAAGGGACGTTTA+CGG 0.440112 1_1:-62614219 None:intergenic
AGGAGCTGAGGCACTGGTCG+TGG 0.440446 1_1:-62622659 None:intergenic
GAAAGGAACCGAATTTGAAA+AGG 0.440849 1_1:-62621991 None:intergenic
CTCTAATTCTACAGGGTGGC+GGG 0.442360 1_1:+62619089 Msa0034560:intron
GTCAATTTCACATAGAGATA+AGG 0.443437 1_1:+62619809 Msa0034560:CDS
GATGAGTATGGTGGACAGTA+TGG 0.443452 1_1:+62622786 Msa0034560:CDS
TCAGAACCAATATTACCTTC+TGG 0.443789 1_1:+62618197 Msa0034560:CDS
ATCTGTCTATAGGAACGGAT+TGG 0.444900 1_1:+62619407 Msa0034560:CDS
TACCAGTCGACCCAAACAAT+GGG 0.445027 1_1:-62622318 None:intergenic
TCCCAAGCTTCTCCTTCTGC+CGG 0.445602 1_1:+62622244 Msa0034560:CDS
GGCTCTTCGAAGCTTGGAAA+TGG 0.446069 1_1:+62619698 Msa0034560:CDS
TCAATTTCACATAGAGATAA+GGG 0.446895 1_1:+62619810 Msa0034560:CDS
GCAGTGCTCTATCTGTCTAT+AGG 0.452392 1_1:+62619397 Msa0034560:CDS
TAATAATGATCAGATGAGTA+TGG 0.453027 1_1:+62622774 Msa0034560:CDS
CACACTGCAATTCATGAAAA+CGG 0.454188 1_1:+62618908 Msa0034560:CDS
TTATACCCCTTGTGTAGATC+CGG 0.458136 1_1:-62619173 None:intergenic
AAATTTGATTGAACCGGGGC+AGG 0.459067 1_1:-62622862 None:intergenic
TTAGGGTTTCTGAGTGCTGC+CGG 0.459791 1_1:-62614268 None:intergenic
TGGACAGGCTCTTCGAAGCT+TGG 0.459853 1_1:+62619692 Msa0034560:CDS
GAATTTAATGCAGGAGGAGG+AGG 0.460153 1_1:+62623054 Msa0034560:CDS
TTATTTCCTTGTAAACTGTC+CGG 0.461528 1_1:-62619738 None:intergenic
CAGGTTGCAAAAGAATCTTC+TGG 0.461777 1_1:+62617347 Msa0034560:intron
TCCTCTATTAAAGAATTCTC+TGG 0.462215 1_1:+62620290 Msa0034560:CDS
CACCACTGGGGTGGAGGAAG+AGG 0.462376 1_1:-62621945 None:intergenic
GTAAGACAGATATTTCTTCT+GGG 0.463753 1_1:+62622338 Msa0034560:CDS
CCACCGGTTCCACCTTCGTA+TGG 0.464894 1_1:-62614190 None:intergenic
TGGCATGATCCATTGCAGAC+TGG 0.465724 1_1:-62619144 None:intergenic
GGCAGTTCTTCTGCTGCAGT+TGG 0.466285 1_1:+62622118 Msa0034560:CDS
AGAGCTTGCAAAAGCTTACA+TGG 0.468352 1_1:+62618745 Msa0034560:CDS
AACCACTGGAAACTGGGAAC+AGG 0.470991 1_1:+62622056 Msa0034560:CDS
GGAGGCAAACATGGGTGAAC+TGG 0.472058 1_1:-62622638 None:intergenic
ACCTTCAATGCTACGTGGAC+AGG 0.473159 1_1:+62619677 Msa0034560:CDS
AACAATCATGATCTGAGGTT+GGG 0.476466 1_1:-62620251 None:intergenic
AGACTGCCAGAAGCCTGAAA+TGG 0.477481 1_1:-62623030 None:intergenic
GTTGACCCATTTGGTAATGC+AGG 0.477897 1_1:-62620585 None:intergenic
AGCTCTTCATCAATGACAGC+TGG 0.480057 1_1:+62622169 Msa0034560:CDS
ACTGGTCGTGGAGGCAAACA+TGG 0.480799 1_1:-62622647 None:intergenic
ACCGGAATTGAAAACGTTAG+TGG 0.483807 1_1:-62622440 None:intergenic
CGGCACATCTGCTTCCTCTT+CGG 0.484850 1_1:+62622477 Msa0034560:CDS
CCGCCTGCGAGTCCTATGTT+TGG 0.486080 1_1:+62622832 Msa0034560:CDS
AGCAGGCTGTGTGGAGGTGG+AGG 0.487226 1_1:-62622707 None:intergenic
CTCTTCCTCCACCCCAGTGG+TGG 0.488201 1_1:+62621946 Msa0034560:CDS
AAAAGCAGGCTGTGTGGAGG+TGG 0.488832 1_1:-62622710 None:intergenic
GTCTCTGTAGTGGTTACAAT+AGG 0.489396 1_1:-62619879 None:intergenic
CATAGAGATAAGGGTGAAAA+CGG 0.489537 1_1:+62619819 Msa0034560:CDS
GGGGAGGAGGAAGACGCTTG+CGG 0.490093 1_1:-62614381 None:intergenic
CAGGTTGAGTTAATGCAAGA+TGG 0.490965 1_1:-62618271 None:intergenic
AAACACCCACCGTAGAAAAT+GGG 0.491513 1_1:+62618240 Msa0034560:CDS
GACATAATAGGGGATTTATA+CGG 0.492049 1_1:-62618860 None:intergenic
AGAAGAGAAGAGGTCAGAAA+TGG 0.492331 1_1:+62618169 Msa0034560:CDS
ACCGGCAGAAGGAGAAGCTT+GGG 0.492443 1_1:-62622245 None:intergenic
AATCCATACGAAGGTGGAAC+CGG 0.494738 1_1:+62614187 Msa0034560:CDS
ATTGTGCCAAGGGCTACTAC+TGG 0.494963 1_1:+62618884 Msa0034560:CDS
GGCGATGGCGACGGAAGGGA+AGG 0.495069 1_1:+62614159 Msa0034560:exon
GGACCACCAGCCTCCTTTGA+AGG 0.495501 1_1:-62620732 None:intergenic
ACAAGCCTGCATTACCAAAT+GGG 0.495587 1_1:+62620580 Msa0034560:CDS
TGACTTCTGATTCTGAGCAC+TGG 0.498162 1_1:-62619790 None:intergenic
GGGAGTTTCTCGTTAGGCTC+AGG 0.498219 1_1:+62623075 Msa0034560:CDS
GATGAACTATCACTCACAAC+TGG 0.498808 1_1:-62619642 None:intergenic
GCTGAACCAAACGCAAAGAC+AGG 0.498952 1_1:-62622745 None:intergenic
AATGCCACCACTTGCAGAAA+GGG 0.499032 1_1:-62621852 None:intergenic
CAAAAGCTTACATGGGGAGC+AGG 0.501625 1_1:+62618753 Msa0034560:CDS
CTGATGATGAAGCAGTAAAT+GGG 0.502812 1_1:-62620803 None:intergenic
CACAGGCTCTAGTTTATTTG+GGG 0.503170 1_1:+62622519 Msa0034560:CDS
TCAGGTGGTGGTGATAAGTC+TGG 0.504936 1_1:+62623093 Msa0034560:CDS
GCTCAAAACCACTGGAAACT+GGG 0.505159 1_1:+62622050 Msa0034560:CDS
GAAGACGAAGTTGCCACCAC+TGG 0.505229 1_1:-62621959 None:intergenic
GGCATGATCCATTGCAGACT+GGG 0.507556 1_1:-62619143 None:intergenic
ATTTGATATGAGAGATGGAA+AGG 0.508806 1_1:-62621717 None:intergenic
CGACGCCCTAACAGAAAATC+CGG 0.509274 1_1:-62621570 None:intergenic
TTTACTGCTTCATCATCAGT+TGG 0.510324 1_1:+62620807 Msa0034560:CDS
TCCAGTATTTGGTTTGGAGA+AGG 0.510622 1_1:+62620704 Msa0034560:CDS
GGTGGAAGCAACAGTAGTAC+TGG 0.510811 1_1:-62622617 None:intergenic
AAATTGCCGGACAGTTTACA+AGG 0.511006 1_1:+62619732 Msa0034560:CDS
TCTCTAATTCTACAGGGTGG+CGG 0.513539 1_1:+62619088 Msa0034560:intron
TTATTTGATGCAGCAAGCAC+AGG 0.517345 1_1:-62621914 None:intergenic
ATCTTCTGGCTCAAAACCAC+TGG 0.517539 1_1:+62622042 Msa0034560:CDS
AACAGGCAAGATGCAGGAAT+CGG 0.519078 1_1:+62622073 Msa0034560:CDS
ATTAAAGAATTCTCTGGACC+TGG 0.519686 1_1:+62620296 Msa0034560:CDS
TGTTGACTTGCAAACTGGAA+AGG 0.519749 1_1:-62622919 None:intergenic
TCTGTGGTATTGCCATCCAC+AGG 0.520215 1_1:+62620444 Msa0034560:CDS
TGACTTTGTGGTCTCTGTAG+TGG 0.520401 1_1:-62619889 None:intergenic
TCTGTCTATAGGAACGGATT+GGG 0.521019 1_1:+62619408 Msa0034560:CDS
GGCAGTCTGGAATTTAATGC+AGG 0.521137 1_1:+62623045 Msa0034560:CDS
TTCTCGTTAGGCTCAGGTGG+TGG 0.522921 1_1:+62623081 Msa0034560:CDS
TTATCCAACCTCTACTCTCA+AGG 0.523532 1_1:+62619000 Msa0034560:CDS
GATAGAGCACTGCCAGAAAG+AGG 0.523765 1_1:-62619387 None:intergenic
AGTTGCCACCACTGGGGTGG+AGG 0.525704 1_1:-62621951 None:intergenic
GTCTTCAACCCAGTCTGCAA+TGG 0.525839 1_1:+62619135 Msa0034560:CDS
CACCGGCAGAAGGAGAAGCT+TGG 0.526121 1_1:-62622246 None:intergenic
GAACAATCATGATCTGAGGT+TGG 0.526959 1_1:-62620252 None:intergenic
AGCTCGTCCCTTTCTGCAAG+TGG 0.528280 1_1:+62621845 Msa0034560:CDS
TTACAAGGAAATAATTTGGA+TGG 0.528392 1_1:+62619747 Msa0034560:CDS
ACTGCCAGAAAGAGGTGAGC+TGG 0.528469 1_1:-62619379 None:intergenic
AGAGAGAGAAATGCAAACGC+AGG 0.530148 1_1:-62614122 None:intergenic
GGCAATCAACAAAGAGCAGT+TGG 0.530558 1_1:+62617368 Msa0034560:CDS
GTGTGCCCAGTAGTAGCCCT+TGG 0.530592 1_1:-62618890 None:intergenic
ACGTTAGTGGCAGAACTTGA+AGG 0.530627 1_1:-62622427 None:intergenic
ACTGCTTCATCATCAGTTGG+TGG 0.531670 1_1:+62620810 Msa0034560:CDS
TCAAATTGATTGTTCTGACT+CGG 0.532594 1_1:+62617403 Msa0034560:CDS
GAATCTGATAGTGGTGATGC+TGG 0.533520 1_1:+62621533 Msa0034560:CDS
GATAATAATATAGGATCTGT+TGG 0.534306 1_1:+62619306 Msa0034560:CDS
TTTGTGGCAGAACTTAAAGA+AGG 0.536600 1_1:-62622373 None:intergenic
AAGTTATTTGATATGAGAGA+TGG 0.536734 1_1:-62621722 None:intergenic
AACTTCTGTTGCTTCATCAA+AGG 0.537317 1_1:+62620665 Msa0034560:CDS
AATGCCACTTCTGCTTCCAC+TGG 0.537743 1_1:+62621875 Msa0034560:CDS
GAACGGCGATGGCGACGGAA+GGG 0.538472 1_1:+62614155 Msa0034560:exon
GGAGGAGGGAGTTTCTCGTT+AGG 0.539319 1_1:+62623069 Msa0034560:CDS
TTAGTTCATCACCTTTGTCC+GGG 0.539929 1_1:+62622584 Msa0034560:CDS
TAATGCCACCACTTGCAGAA+AGG 0.540251 1_1:-62621853 None:intergenic
ATTGTTCTGACTCGGATCAA+GGG 0.540315 1_1:+62617411 Msa0034560:CDS
GGAGAAGGTTGATCCTTCAA+AGG 0.540808 1_1:+62620719 Msa0034560:CDS
TATTATGTCGATTGTGCCAA+GGG 0.540886 1_1:+62618874 Msa0034560:CDS
GATAAACCTGCTGATGTGAC+AGG 0.541608 1_1:-62622013 None:intergenic
GTCGTTTGAGTTCTGCGGAA+GGG 0.541660 1_1:-62614229 None:intergenic
CCAGAAGCCTGAAATGGAGA+AGG 0.542747 1_1:-62623024 None:intergenic
GGAAAGGAAGAAGAAAATGA+AGG 0.544776 1_1:-62621701 None:intergenic
GCCGAGTCCAAATGTTGTAC+CGG 0.545351 1_1:-62622458 None:intergenic
GGGTTAGGGCTTCCAAAAGC+AGG 0.545572 1_1:-62622724 None:intergenic
AAAGGAACCGAATTTGAAAA+GGG 0.546039 1_1:-62621990 None:intergenic
AAGACGAAGTTGCCACCACT+GGG 0.547031 1_1:-62621958 None:intergenic
TGAAGAATTAGGAGCAGGAG+GGG 0.547301 1_1:-62614401 None:intergenic
ACTGGGAACAGGCAAGATGC+AGG 0.547845 1_1:+62622067 Msa0034560:CDS
CGAACGGCGATGGCGACGGA+AGG 0.548425 1_1:+62614154 Msa0034560:exon
TAGCATTGATGAGGATACAT+TGG 0.548947 1_1:-62618780 None:intergenic
AAACTGAGGAGCTGAGGCAC+TGG 0.549311 1_1:-62622665 None:intergenic
TCAAGAAGAAGCTGTAGAGA+TGG 0.549972 1_1:+62616216 Msa0034560:CDS
CTATTATGTCGATTGTGCCA+AGG 0.550091 1_1:+62618873 Msa0034560:CDS
AGAATGAAGGGCCTGAAGCA+AGG 0.551999 1_1:-62621775 None:intergenic
GATGGAACAAGAAATGAGAC+AGG 0.553317 1_1:+62616234 Msa0034560:CDS
CAAAGGTGATGAACTAAATG+AGG 0.556255 1_1:-62622578 None:intergenic
GTTTGGTCAACAACCTGCCC+CGG 0.557893 1_1:+62622849 Msa0034560:CDS
GGCAAACATGGGTGAACTGG+TGG 0.558292 1_1:-62622635 None:intergenic
ATGCAGATGATTGAACTGAC+TGG 0.558405 1_1:-62622291 None:intergenic
TTATTTGATACAAGAAGAGA+TGG 0.559167 1_1:-62621809 None:intergenic
AATTCCAGTGGAAGCAGAAG+TGG 0.559407 1_1:-62621879 None:intergenic
ATGTCCATAGGTTCCTATTG+AGG 0.560616 1_1:+62618706 Msa0034560:intron
CTGTGGTATTGCCATCCACA+GGG 0.564030 1_1:+62620445 Msa0034560:CDS
CGTGCGATATCCTGCTCGTA+GGG 0.564190 1_1:+62618805 Msa0034560:CDS
GGAACGGAAGAAGAGAATGA+AGG 0.564570 1_1:-62621788 None:intergenic
TCTCTCTGAACGAACGGCGA+TGG 0.566207 1_1:+62614144 Msa0034560:exon
AAAGTTTGTGAATCTGATAG+TGG 0.567452 1_1:+62621524 Msa0034560:CDS
TTGTGTAGATCCGGTAAACA+TGG 0.567997 1_1:-62619164 None:intergenic
TGCCTGTTCCCAGTTTCCAG+TGG 0.568878 1_1:-62622058 None:intergenic
GTCAACTCTAGTAGTGGCAC+AGG 0.569586 1_1:+62622502 Msa0034560:CDS
CACCGAAAGAACTCTGAGAC+TGG 0.570128 1_1:-62622198 None:intergenic
GTTGATCCTTCAAAGGAGGC+TGG 0.570834 1_1:+62620726 Msa0034560:CDS
TGAACGAACGGCGATGGCGA+CGG 0.572954 1_1:+62614150 Msa0034560:exon
GACGCCGTACGATCGTCCTC+CGG 0.573553 1_1:+62614249 Msa0034560:CDS
AGTACTGGACGTTCCAAACC+CGG 0.574845 1_1:-62622602 None:intergenic
ACGTTTACGGAACTTGCCAC+CGG 0.576729 1_1:-62614206 None:intergenic
ACTAACCTGATTGAGCCTCC+CGG 0.577182 1_1:-62620873 None:intergenic
ATACAAAATTTGATTGAACC+GGG 0.578119 1_1:-62622867 None:intergenic
CTAACAGCAACAACAACGGT+TGG 0.578586 1_1:+62614287 Msa0034560:CDS
AAGACGCTTGCGGAGGAGAG+AGG 0.578871 1_1:-62614371 None:intergenic
AACTTTGTCCGCAATAACAA+TGG 0.579284 1_1:-62620376 None:intergenic
TTGTGCCAAGGGCTACTACT+GGG 0.579474 1_1:+62618885 Msa0034560:CDS
GTTGTGTCTTCCCTACGAGC+AGG 0.579803 1_1:-62618815 None:intergenic
AGTTCTTTCGGTGCTGCCAG+TGG 0.580085 1_1:+62622208 Msa0034560:CDS
ACTTGCAAACTGGAAAGGAC+TGG 0.580401 1_1:-62622914 None:intergenic
CTGGAATTTAATGCAGGAGG+AGG 0.581117 1_1:+62623051 Msa0034560:CDS
GAATGAAGGGCCTGAAGCAA+GGG 0.581593 1_1:-62621774 None:intergenic
GGAACCAAACAGAGAACCAC+TGG 0.582317 1_1:-62622224 None:intergenic
AAACCTGAAGAATTAGGAGC+AGG 0.586098 1_1:-62614406 None:intergenic
GCTCATGTTAAGACAACTGA+TGG 0.586123 1_1:+62620486 Msa0034560:CDS
GAGGAGGAAGACGCTTGCGG+AGG 0.586731 1_1:-62614378 None:intergenic
AATTTAATGCAGGAGGAGGA+GGG 0.587411 1_1:+62623055 Msa0034560:CDS
CGTCGTTTGAGTTCTGCGGA+AGG 0.588479 1_1:-62614230 None:intergenic
GCTGCCGGAGGACGATCGTA+CGG 0.589716 1_1:-62614253 None:intergenic
CATGTTAAGACAACTGATGG+TGG 0.589721 1_1:+62620489 Msa0034560:CDS
TGGAAAGGACTGGTTCCTGA+AGG 0.589778 1_1:-62622967 None:intergenic
AATGTATCCTCATCAATGCT+AGG 0.589876 1_1:+62618782 Msa0034560:CDS
GCTCTATCTGTCTATAGGAA+CGG 0.590357 1_1:+62619402 Msa0034560:CDS
GATGAAGCAGTAAATGGGAT+TGG 0.590394 1_1:-62620798 None:intergenic
AGCTGAGGCACTGGTCGTGG+AGG 0.591561 1_1:-62622656 None:intergenic
GAAAGGAAGAAGAAAATGAA+GGG 0.591845 1_1:-62621700 None:intergenic
CGAAGTTGCCACCACTGGGG+TGG 0.592898 1_1:-62621954 None:intergenic
TCCGGTACAACATTTGGACT+CGG 0.596719 1_1:+62622457 Msa0034560:CDS
TGACAGCACTTATGCAGTCA+AGG 0.597061 1_1:+62618123 Msa0034560:CDS
CTGAAGAATTAGGAGCAGGA+GGG 0.598428 1_1:-62614402 None:intergenic
ACTAGAGTTGACTGCCGAAG+AGG 0.598696 1_1:-62622491 None:intergenic
GAAGAATTAGGAGCAGGAGG+GGG 0.599724 1_1:-62614400 None:intergenic
GAAGCAGTAAATGGGATTGG+TGG 0.600389 1_1:-62620795 None:intergenic
CCTGAAGAATTAGGAGCAGG+AGG 0.600621 1_1:-62614403 None:intergenic
CTCCTCAAAATCCAGTGAGA+TGG 0.601522 1_1:+62619551 Msa0034560:CDS
TAGCAGAACAGGCTTATGAA+AGG 0.601599 1_1:-62619460 None:intergenic
TGAGGGACTTTCATGTGCAA+TGG 0.601828 1_1:-62620415 None:intergenic
TGCAGATGATTGAACTGACT+GGG 0.603948 1_1:-62622290 None:intergenic
TCTAATCTTCTATATTCCAA+AGG 0.604820 1_1:+62619354 Msa0034560:CDS
AGGACTGGTTCCTGAAGGAG+TGG 0.605017 1_1:-62622962 None:intergenic
TTGTTCTGACTCGGATCAAG+GGG 0.605175 1_1:+62617412 Msa0034560:CDS
CAAACCTTGAGAGTAGAGGT+TGG 0.606151 1_1:-62619004 None:intergenic
AATCTGATAGTGGTGATGCT+GGG 0.607337 1_1:+62621534 Msa0034560:CDS
GAACGGAAGAAGAGAATGAA+GGG 0.607896 1_1:-62621787 None:intergenic
CAATACCACAGATGATGTTG+AGG 0.608435 1_1:-62620433 None:intergenic
GCTCACAGACTCATCACTCA+TGG 0.609065 1_1:+62614331 Msa0034560:CDS
AGGCTTATGAAAGGAAGATG+AGG 0.609383 1_1:-62619451 None:intergenic
AGATCTGCCACGAGGTCTTG+GGG 0.610274 1_1:-62618939 None:intergenic
GTTGTAAATACACCGGCAGA+AGG 0.611788 1_1:-62622256 None:intergenic
GAGAGAGAAATGCAAACGCA+GGG 0.612349 1_1:-62614121 None:intergenic
GTTGGAACAAGAAATGAGAC+AGG 0.613639 1_1:+62616186 Msa0034560:CDS
CAGAAGCCTGAAATGGAGAA+GGG 0.613804 1_1:-62623023 None:intergenic
TGATACAAGAAGAGATGGAA+CGG 0.614851 1_1:-62621804 None:intergenic
TTGGTGTCAAAGTTTACTGA+TGG 0.615022 1_1:-62620753 None:intergenic
TTCCTCTTCCTCCACCCCAG+TGG 0.615422 1_1:+62621943 Msa0034560:CDS
TCTATCGTAAACCCTGTGGA+TGG 0.616103 1_1:-62620456 None:intergenic
AATACCACAGATGATGTTGA+GGG 0.616813 1_1:-62620432 None:intergenic
TTAAAGAATTCTCTGGACCT+GGG 0.617457 1_1:+62620297 Msa0034560:CDS
AGGACTGGTTCCTGAATGAG+TGG 0.618361 1_1:-62622899 None:intergenic
GAATGAAAACTGAGGAGCTG+AGG 0.618481 1_1:-62622671 None:intergenic
TGAAATGGAGAAGGGTTCTG+TGG 0.619865 1_1:-62623015 None:intergenic
GACGTTCCAAACCCGGACAA+AGG 0.621900 1_1:-62622595 None:intergenic
TGACCAAACATAGGACTCGC+AGG 0.622086 1_1:-62622835 None:intergenic
CCATACGAAGGTGGAACCGG+TGG 0.622513 1_1:+62614190 Msa0034560:CDS
GAGCTTGCAAAAGCTTACAT+GGG 0.622577 1_1:+62618746 Msa0034560:CDS
GCGTGCGATATCCTGCTCGT+AGG 0.623393 1_1:+62618804 Msa0034560:CDS
AGTTTCTCGTTAGGCTCAGG+TGG 0.623733 1_1:+62623078 Msa0034560:CDS
GAGAAGAATCCATACGAAGG+TGG 0.623855 1_1:+62614181 Msa0034560:CDS
ACTGTAGATGCAGCTGTTAG+GGG 0.625703 1_1:+62618146 Msa0034560:CDS
AAGAGAACAATCATGATCTG+AGG 0.626147 1_1:-62620256 None:intergenic
GCAGGTTGTTGACCAAACAT+AGG 0.627604 1_1:-62622844 None:intergenic
TCGGCAGTCAACTCTAGTAG+TGG 0.628156 1_1:+62622496 Msa0034560:CDS
CTGTTAGGGGAGAAGAGAAG+AGG 0.630340 1_1:+62618159 Msa0034560:CDS
TCGTCCCTTTCTGCAAGTGG+TGG 0.630857 1_1:+62621848 Msa0034560:CDS
ACGGCGTCGTTTGAGTTCTG+CGG 0.630861 1_1:-62614234 None:intergenic
ACTAGCAAACTGGAAAGGAC+TGG 0.630992 1_1:-62622977 None:intergenic
ATGTTTACCGGATCTACACA+AGG 0.632334 1_1:+62619166 Msa0034560:CDS
TACAAAATTTGATTGAACCG+GGG 0.632886 1_1:-62622866 None:intergenic
GATCCTTCAAAGGAGGCTGG+TGG 0.633729 1_1:+62620729 Msa0034560:CDS
CTCTATAAGCATTATCACCC+AGG 0.634534 1_1:-62620314 None:intergenic
ACCTGCTGATGTGACAGGAA+AGG 0.635569 1_1:-62622008 None:intergenic
TTACCAGTCGACCCAAACAA+TGG 0.636268 1_1:-62622319 None:intergenic
TGTTGACTAGCAAACTGGAA+AGG 0.636542 1_1:-62622982 None:intergenic
GGCTTATGAAAGGAAGATGA+GGG 0.636981 1_1:-62619450 None:intergenic
CTGAACCAAACGCAAAGACA+GGG 0.637440 1_1:-62622744 None:intergenic
CTGGTCGTGGAGGCAAACAT+GGG 0.638466 1_1:-62622646 None:intergenic
TCCAAAAGCAGGCTGTGTGG+AGG 0.638902 1_1:-62622713 None:intergenic
CAAACGCAAAGACAGGGTTA+GGG 0.642445 1_1:-62622738 None:intergenic
GAACCAAATAGAGAATTGCT+GGG 0.645460 1_1:-62622556 None:intergenic
TAATGATCAGATGAGTATGG+TGG 0.652388 1_1:+62622777 Msa0034560:CDS
AGTTGACATGATAATTCCAG+TGG 0.652495 1_1:-62621891 None:intergenic
GAAGGTTGATCCTTCAAAGG+AGG 0.653111 1_1:+62620722 Msa0034560:CDS
TGGCACAATCGACATAATAG+GGG 0.653229 1_1:-62618870 None:intergenic
AGTAGAAGTTGTAAATACAC+CGG 0.654574 1_1:-62622263 None:intergenic
AAAGCGTAGAAATTTAGCAA+CGG 0.654772 1_1:+62619284 Msa0034560:CDS
AGTCTGGAATTTAATGCAGG+AGG 0.655425 1_1:+62623048 Msa0034560:CDS
ATTCCATATGAGTGCACACG+AGG 0.656885 1_1:+62619986 Msa0034560:CDS
AAGTCCGAAGAAAACGTGAG+TGG 0.656892 1_1:+62619498 Msa0034560:CDS
GCTTCCAAAAGCAGGCTGTG+TGG 0.657764 1_1:-62622716 None:intergenic
AGCATCTATCGTAAACCCTG+TGG 0.658598 1_1:-62620460 None:intergenic
GGGTTTCTGAGTGCTGCCGG+AGG 0.659550 1_1:-62614265 None:intergenic
TGAGTGATGAGTCTGTGAGC+GGG 0.660621 1_1:-62614328 None:intergenic
AAGGCAAACCTTGAGAGTAG+AGG 0.664117 1_1:-62619008 None:intergenic
AAGTCCCTCAACATCATCTG+TGG 0.664811 1_1:+62620428 Msa0034560:CDS
AATGGAGAAGGGTTCTGTGG+AGG 0.665595 1_1:-62623012 None:intergenic
AGCTTGCAAAAGCTTACATG+GGG 0.668348 1_1:+62618747 Msa0034560:CDS
TATGGTGGACAGTATGGCTG+AGG 0.670674 1_1:+62622792 Msa0034560:CDS
TTTGTGACCCCAAGACCTCG+TGG 0.674587 1_1:+62618932 Msa0034560:CDS
TGAAGCATAAGACTTTCACC+AGG 0.685974 1_1:+62617459 Msa0034560:CDS
TCGCACGCCTAGCATTGATG+AGG 0.686079 1_1:-62618789 None:intergenic
AGCTAATGTTAAGACATCTG+TGG 0.686639 1_1:+62620512 Msa0034560:CDS
AACCCTAACAGCAACAACAA+CGG 0.687562 1_1:+62614283 Msa0034560:CDS
GCAGACTGGGTTGAAGACGA+AGG 0.692797 1_1:-62619130 None:intergenic
GTTTACCGGATCTACACAAG+GGG 0.693772 1_1:+62619168 Msa0034560:CDS
ATGAGTGATGAGTCTGTGAG+CGG 0.701940 1_1:-62614329 None:intergenic
ACCAGTCGACCCAAACAATG+GGG 0.714983 1_1:-62622317 None:intergenic
AAGGAGAAGAATCCATACGA+AGG 0.716663 1_1:+62614178 Msa0034560:CDS
TGTTCTGACTCGGATCAAGG+GGG 0.723689 1_1:+62617413 Msa0034560:CDS
TGTTTACCGGATCTACACAA+GGG 0.733340 1_1:+62619167 Msa0034560:CDS
TTATCACCTTCAATGCTACG+TGG 0.741114 1_1:+62619672 Msa0034560:CDS
GCTGAAGTGAATGAAAACTG+AGG 0.742651 1_1:-62622679 None:intergenic
TAAATTGCAGATCTGCCACG+AGG 0.764822 1_1:-62618947 None:intergenic
CCAAACATAGGACTCGCAGG+CGG 0.769585 1_1:-62622832 None:intergenic
AGACGAAGTTGCCACCACTG+GGG 0.787620 1_1:-62621957 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTATTTATTAACTATG+AGG + chr1_1:62614635-62614654 Msa0034560:intron 10.0%
!!! ATAATTTTATAGTAAAATGT+TGG + chr1_1:62617602-62617621 Msa0034560:intron 10.0%
!! CAAAAAATACATTAAATAAT+AGG - chr1_1:62617716-62617735 None:intergenic 10.0%
!! AATAAGCAGTAAATTTAAAA+TGG - chr1_1:62614617-62614636 None:intergenic 15.0%
!! ATAATATTCATAAAAAGTCT+TGG + chr1_1:62615100-62615119 Msa0034560:intron 15.0%
!! ACAAAATGTAAATGAAATTA+GGG + chr1_1:62615497-62615516 Msa0034560:intron 15.0%
!!! TATCTTGAAAGATTATTTTT+TGG + chr1_1:62616318-62616337 Msa0034560:intron 15.0%
!!! ATCTTGAAAGATTATTTTTT+GGG + chr1_1:62616319-62616338 Msa0034560:intron 15.0%
!!! TATAAGTAAAAGCATAAATT+TGG - chr1_1:62616483-62616502 None:intergenic 15.0%
!!! AAATCAATCTTTATTTCTAT+TGG + chr1_1:62617219-62617238 Msa0034560:intron 15.0%
!! CTATATTATATATTGAGTAT+TGG + chr1_1:62617245-62617264 Msa0034560:intron 15.0%
!! TATTCAAGCATAAAATATTA+AGG - chr1_1:62618321-62618340 None:intergenic 15.0%
!! ATGTTAATAACTAAGAAATA+TGG - chr1_1:62618453-62618472 None:intergenic 15.0%
!! ATATTTCTTAGTTATTAACA+TGG + chr1_1:62618452-62618471 Msa0034560:intron 15.0%
!! AGAATCAAACAAATAAATTA+GGG - chr1_1:62618623-62618642 None:intergenic 15.0%
!! TAGAATCAAACAAATAAATT+AGG - chr1_1:62618624-62618643 None:intergenic 15.0%
!! ATTATGATACAAAATAATTC+AGG - chr1_1:62619036-62619055 None:intergenic 15.0%
!!! AAATTCTTTTATGATGAAAT+CGG + chr1_1:62619935-62619954 Msa0034560:CDS 15.0%
!! AATAAATACTTCAATAGATA+TGG - chr1_1:62620026-62620045 None:intergenic 15.0%
!!! CAGTTTTTTAGATATTTATT+TGG + chr1_1:62620193-62620212 Msa0034560:intron 15.0%
!!! TTTTTTAGATATTTATTTGG+TGG + chr1_1:62620196-62620215 Msa0034560:intron 15.0%
!!! TAGACTGTTTTTTTTTTTTT+GGG + chr1_1:62620952-62620971 Msa0034560:intron 15.0%
!! AAATCAAAGTAAAAAACAAA+TGG - chr1_1:62620993-62621012 None:intergenic 15.0%
!!! TTTTTTACTTTGATTTAGTT+TGG + chr1_1:62620997-62621016 Msa0034560:intron 15.0%
!!! TTTTTACTTTGATTTAGTTT+GGG + chr1_1:62620998-62621017 Msa0034560:intron 15.0%
!! AATTTGAATATACTATTTGA+TGG - chr1_1:62621638-62621657 None:intergenic 15.0%
!! TCAAATAGTATATTCAAATT+TGG + chr1_1:62621638-62621657 Msa0034560:CDS 15.0%
!! ATAGTTCAAATCAAAATAAT+GGG + chr1_1:62621663-62621682 Msa0034560:CDS 15.0%
!! AATTGAATTCAAACAAAAGA+GGG - chr1_1:62614445-62614464 None:intergenic 20.0%
!!! CTAGATTGAAATTTTGTATT+AGG + chr1_1:62614515-62614534 Msa0034560:intron 20.0%
!!! GAAATTTTGTATTAGGAATT+AGG + chr1_1:62614522-62614541 Msa0034560:intron 20.0%
!! AAGTTTATTAATGAGTGTTT+CGG + chr1_1:62614794-62614813 Msa0034560:intron 20.0%
!!! GATCTTTTTAAGCTATTATA+GGG - chr1_1:62615148-62615167 None:intergenic 20.0%
!!! TGATCTTTTTAAGCTATTAT+AGG - chr1_1:62615149-62615168 None:intergenic 20.0%
!! GACAAAATGTAAATGAAATT+AGG + chr1_1:62615496-62615515 Msa0034560:intron 20.0%
!!! TCTTTGTTGAATTTTTTCAA+CGG + chr1_1:62615562-62615581 Msa0034560:intron 20.0%
!! ACAAAAAATGACATTTAAAG+TGG - chr1_1:62616080-62616099 None:intergenic 20.0%
!! GCATGATAATAAAGAAATTA+TGG - chr1_1:62616134-62616153 None:intergenic 20.0%
!!! TCTTGAAAGATTATTTTTTG+GGG + chr1_1:62616320-62616339 Msa0034560:intron 20.0%
!!! CTGATATTATCTTAAGTTTT+GGG - chr1_1:62616693-62616712 None:intergenic 20.0%
!!! TCTGATATTATCTTAAGTTT+TGG - chr1_1:62616694-62616713 None:intergenic 20.0%
!! TGAATAATGTTTATAAGTGA+TGG + chr1_1:62616817-62616836 Msa0034560:intron 20.0%
!! GAATAATGTTTATAAGTGAT+GGG + chr1_1:62616818-62616837 Msa0034560:intron 20.0%
!! AGAAGAATTAAGCTAAAAAA+TGG - chr1_1:62617067-62617086 None:intergenic 20.0%
!! AAACTAACAAAAGACATTTA+AGG - chr1_1:62617153-62617172 None:intergenic 20.0%
!! TTGTAACTAAAATGTGTAAT+GGG - chr1_1:62618385-62618404 None:intergenic 20.0%
!!! GTTTATTTTCCTATGTAATT+GGG + chr1_1:62618474-62618493 Msa0034560:intron 20.0%
!! AGACTTTGAATTATGAATAT+TGG - chr1_1:62618570-62618589 None:intergenic 20.0%
!!! ATTTGTTTGATTCTATTTTG+TGG + chr1_1:62618629-62618648 Msa0034560:intron 20.0%
!! ATACAAAATAATTCAGGAAA+AGG - chr1_1:62619030-62619049 None:intergenic 20.0%
!! TAAATGATATTTACTAACCA+TGG + chr1_1:62620112-62620131 Msa0034560:intron 20.0%
!! AAATGATATTTACTAACCAT+GGG + chr1_1:62620113-62620132 Msa0034560:intron 20.0%
!! CATAATTATTTAGGAGTAAA+TGG - chr1_1:62620152-62620171 None:intergenic 20.0%
!!! TTTTATTTTCCTTGATAGTA+TGG + chr1_1:62620228-62620247 Msa0034560:intron 20.0%
!! CTAGAAAAATTAAACAAAGA+AGG - chr1_1:62620618-62620637 None:intergenic 20.0%
!!! CTAGACTGTTTTTTTTTTTT+TGG + chr1_1:62620951-62620970 Msa0034560:intron 20.0%
!!! TTTTACTTTGATTTAGTTTG+GGG + chr1_1:62620999-62621018 Msa0034560:intron 20.0%
!!! AAAGTTTTGTTGTTACTTTT+GGG + chr1_1:62621104-62621123 Msa0034560:intron 20.0%
!! TAAGAAAGTTTGAAAATGAA+AGG - chr1_1:62621141-62621160 None:intergenic 20.0%
!!! CATTATTTTGATTTGAACTA+TGG - chr1_1:62621664-62621683 None:intergenic 20.0%
!! CATAGTTCAAATCAAAATAA+TGG + chr1_1:62621662-62621681 Msa0034560:CDS 20.0%
!! AACAGTTCAAATCAAAATAA+TGG + chr1_1:62621749-62621768 Msa0034560:CDS 20.0%
!! ACAGTTCAAATCAAAATAAT+GGG + chr1_1:62621750-62621769 Msa0034560:CDS 20.0%
!! AATACAAAATTTGATTGAAC+CGG - chr1_1:62622871-62622890 None:intergenic 20.0%
!!! GTTCAATCAAATTTTGTATT+TGG + chr1_1:62622871-62622890 Msa0034560:CDS 20.0%
! CAATTGAATTCAAACAAAAG+AGG - chr1_1:62614446-62614465 None:intergenic 25.0%
!!! TTGTATTTTTTGTTGCTGTT+AGG + chr1_1:62614549-62614568 Msa0034560:intron 25.0%
!!! TGTATTTTTTGTTGCTGTTA+GGG + chr1_1:62614550-62614569 Msa0034560:intron 25.0%
! TTGAAAGTAATTGCATTTGT+CGG + chr1_1:62614726-62614745 Msa0034560:intron 25.0%
! AGTTTATTAATGAGTGTTTC+GGG + chr1_1:62614795-62614814 Msa0034560:intron 25.0%
! TTTGATTGTTATCATCATCA+CGG + chr1_1:62614835-62614854 Msa0034560:intron 25.0%
! TCTTTCAATTTCTTGCTTTA+GGG + chr1_1:62614928-62614947 Msa0034560:intron 25.0%
! AAAGATCATAAATGTTCATG+AGG + chr1_1:62615161-62615180 Msa0034560:intron 25.0%
!!! GTTTAGTTTGATGGATATTT+TGG + chr1_1:62615242-62615261 Msa0034560:intron 25.0%
! AGAACATGACATTATTGAAT+GGG - chr1_1:62615355-62615374 None:intergenic 25.0%
! TAGAACATGACATTATTGAA+TGG - chr1_1:62615356-62615375 None:intergenic 25.0%
!!! CTTTGTTGAATTTTTTCAAC+GGG + chr1_1:62615563-62615582 Msa0034560:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr1_1:62615856-62615875 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr1_1:62615855-62615874 Msa0034560:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr1_1:62615868-62615887 Msa0034560:intron 25.0%
!! ACATTTAAAGTGGTGAAAAT+TGG - chr1_1:62616070-62616089 None:intergenic 25.0%
!! ATATGTGGTTTTTATGATTC+AGG + chr1_1:62616163-62616182 Msa0034560:intron 25.0%
!! TATGTGGTTTTTATGATTCA+GGG + chr1_1:62616164-62616183 Msa0034560:intron 25.0%
! AATCTTTCAAGATATGCAAA+TGG - chr1_1:62616312-62616331 None:intergenic 25.0%
! AACTAAACATAAACACAGAT+AGG - chr1_1:62616524-62616543 None:intergenic 25.0%
!! TGGTTGGAATTGATAATTTA+AGG + chr1_1:62616545-62616564 Msa0034560:intron 25.0%
!! GGTTGGAATTGATAATTTAA+GGG + chr1_1:62616546-62616565 Msa0034560:intron 25.0%
! TTGACTCAATTACACAAAAT+CGG - chr1_1:62616662-62616681 None:intergenic 25.0%
! TCAATGCAATCTTAGAAATT+GGG - chr1_1:62616892-62616911 None:intergenic 25.0%
!! TGTAGAATGCTTGTTAATAT+TGG + chr1_1:62617025-62617044 Msa0034560:intron 25.0%
! GTGAGATATCAATAATAACA+CGG - chr1_1:62617301-62617320 None:intergenic 25.0%
!! GGATTAGGAATAATTGTTTT+TGG + chr1_1:62617499-62617518 Msa0034560:intron 25.0%
! AAAAAAATCATAATCAAGCC+AGG - chr1_1:62617653-62617672 None:intergenic 25.0%
! TAAGAACGATTTCAAAAACT+AGG - chr1_1:62617785-62617804 None:intergenic 25.0%
! AAGAACGATTTCAAAAGATA+TGG - chr1_1:62617898-62617917 None:intergenic 25.0%
! AGAATGGAATGAAATTGATA+TGG - chr1_1:62618012-62618031 None:intergenic 25.0%
! CATAAATCAAAGACTAAGAA+TGG - chr1_1:62618028-62618047 None:intergenic 25.0%
!! CATTCTTAGTCTTTGATTTA+TGG + chr1_1:62618026-62618045 Msa0034560:intron 25.0%
!! GTTGATTGTGTATATGTTTT+TGG + chr1_1:62618071-62618090 Msa0034560:intron 25.0%
! CTTGTAACTAAAATGTGTAA+TGG - chr1_1:62618386-62618405 None:intergenic 25.0%
!!! CATTACACATTTTAGTTACA+AGG + chr1_1:62618384-62618403 Msa0034560:intron 25.0%
!!! GGTTTATTTTCCTATGTAAT+TGG + chr1_1:62618473-62618492 Msa0034560:intron 25.0%
!!! TGAATATTGGTTGATAAGAT+TGG - chr1_1:62618557-62618576 None:intergenic 25.0%
! GTATCATAATGTTCATGTAT+TGG + chr1_1:62619046-62619065 Msa0034560:intron 25.0%
! TTAGCAACGGATAATAATAT+AGG + chr1_1:62619297-62619316 Msa0034560:CDS 25.0%
! GATAATAATATAGGATCTGT+TGG + chr1_1:62619306-62619325 Msa0034560:CDS 25.0%
!! ATAGAAGATTAGACTTTTGA+CGG - chr1_1:62619347-62619366 None:intergenic 25.0%
! TCTAATCTTCTATATTCCAA+AGG + chr1_1:62619354-62619373 Msa0034560:CDS 25.0%
! CAGTTTACAAGGAAATAATT+TGG + chr1_1:62619743-62619762 Msa0034560:CDS 25.0%
! TTACAAGGAAATAATTTGGA+TGG + chr1_1:62619747-62619766 Msa0034560:CDS 25.0%
! TCAATTTCACATAGAGATAA+GGG + chr1_1:62619810-62619829 Msa0034560:CDS 25.0%
! ATTATTTAGGAGTAAATGGA+AGG - chr1_1:62620148-62620167 None:intergenic 25.0%
! TGCTTCACTCATAATTATTT+AGG - chr1_1:62620161-62620180 None:intergenic 25.0%
! TAATAACATCTCTTATTACG+AGG + chr1_1:62621025-62621044 Msa0034560:intron 25.0%
!!! GAAAGTTTTGTTGTTACTTT+TGG + chr1_1:62621103-62621122 Msa0034560:intron 25.0%
!!! AAGTTTTGTTGTTACTTTTG+GGG + chr1_1:62621105-62621124 Msa0034560:intron 25.0%
! ATGTAGCTAAACATATGAAA+TGG - chr1_1:62621169-62621188 None:intergenic 25.0%
! AAGTTATTTGATATGAGAGA+TGG - chr1_1:62621725-62621744 None:intergenic 25.0%
! TTATTTGATACAAGAAGAGA+TGG - chr1_1:62621812-62621831 None:intergenic 25.0%
! AGAAGAAAAAGATGTATTTG+TGG - chr1_1:62622392-62622411 None:intergenic 25.0%
!! ACAAATACATCTTTTTCTTC+TGG + chr1_1:62622391-62622410 Msa0034560:CDS 25.0%
!! CAAATACATCTTTTTCTTCT+GGG + chr1_1:62622392-62622411 Msa0034560:CDS 25.0%
! TAATAATGATCAGATGAGTA+TGG + chr1_1:62622774-62622793 Msa0034560:CDS 25.0%
! ATACAAAATTTGATTGAACC+GGG - chr1_1:62622870-62622889 None:intergenic 25.0%
AAGTGAAAACCTGAAGAATT+AGG - chr1_1:62614415-62614434 None:intergenic 30.0%
AATATCGAAGAGTTAAACAC+CGG - chr1_1:62614903-62614922 None:intergenic 30.0%
GTCTTTCAATTTCTTGCTTT+AGG + chr1_1:62614927-62614946 Msa0034560:intron 30.0%
TATCCATCAAACTAAACCTA+AGG - chr1_1:62615239-62615258 None:intergenic 30.0%
! TTGTTGCTGACAAAATTTTG+AGG - chr1_1:62615433-62615452 None:intergenic 30.0%
! TTGTTTTCTAAGCTGATAGT+AGG + chr1_1:62615474-62615493 Msa0034560:intron 30.0%
TGTAAATGAAATTAGGGAAG+TGG + chr1_1:62615503-62615522 Msa0034560:intron 30.0%
GTAAATGAAATTAGGGAAGT+GGG + chr1_1:62615504-62615523 Msa0034560:intron 30.0%
TAAATGAAATTAGGGAAGTG+GGG + chr1_1:62615505-62615524 Msa0034560:intron 30.0%
TTCAACAAAGAAACGTTTGA+AGG - chr1_1:62615553-62615572 None:intergenic 30.0%
!!! AATTTTTTCAACGGGTTTTG+TGG + chr1_1:62615571-62615590 Msa0034560:intron 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr1_1:62615830-62615849 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr1_1:62615881-62615900 Msa0034560:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr1_1:62615953-62615972 None:intergenic 30.0%
!! TAAGTTACTTGCTGTAAACA+AGG - chr1_1:62616022-62616041 None:intergenic 30.0%
GTTTACAGCAAGTAACTTAT+TGG + chr1_1:62616023-62616042 Msa0034560:intron 30.0%
!! TATTGGCTGTAACTTTTCTA+TGG + chr1_1:62616040-62616059 Msa0034560:intron 30.0%
ATTAAGCTGTAAAGAAACTG+AGG - chr1_1:62616420-62616439 None:intergenic 30.0%
GCAAAATTTACTACACTGTA+TGG + chr1_1:62616445-62616464 Msa0034560:intron 30.0%
TCTGTGTTTATGTTTAGTTG+TGG + chr1_1:62616525-62616544 Msa0034560:intron 30.0%
TGTTTATGTTTAGTTGTGGT+TGG + chr1_1:62616529-62616548 Msa0034560:intron 30.0%
CAATCTTAGAAATTGGGTTT+GGG - chr1_1:62616886-62616905 None:intergenic 30.0%
CTCAATGCAATCTTAGAAAT+TGG - chr1_1:62616893-62616912 None:intergenic 30.0%
! ATTGCAGAATTGGCTTAATT+TGG + chr1_1:62616969-62616988 Msa0034560:intron 30.0%
! AACTTTTACATCCACAATGT+AGG - chr1_1:62617129-62617148 None:intergenic 30.0%
TCTAATTGCATGTTTCATGA+TGG + chr1_1:62617180-62617199 Msa0034560:intron 30.0%
CTAATTGCATGTTTCATGAT+GGG + chr1_1:62617181-62617200 Msa0034560:intron 30.0%
TCAAATTGATTGTTCTGACT+CGG + chr1_1:62617403-62617422 Msa0034560:CDS 30.0%
AACAATTATTCCTAATCCAC+AGG - chr1_1:62617497-62617516 None:intergenic 30.0%
! TATTGCGATGATTCTGATTT+TGG + chr1_1:62617743-62617762 Msa0034560:intron 30.0%
CAAAAACTAGGAGACTAAAA+TGG - chr1_1:62617773-62617792 None:intergenic 30.0%
TTTCAAAAGATATGGACATC+AGG - chr1_1:62617890-62617909 None:intergenic 30.0%
ATGAAATTGATATGGACATC+AGG - chr1_1:62618004-62618023 None:intergenic 30.0%
! TTGATTTATGGTGTACCTTT+TGG + chr1_1:62618038-62618057 Msa0034560:intron 30.0%
! TGATTTATGGTGTACCTTTT+GGG + chr1_1:62618039-62618058 Msa0034560:intron 30.0%
! TTTTGTCCAGAAGGTAATAT+TGG - chr1_1:62618206-62618225 None:intergenic 30.0%
AATATTACCTTCTGGACAAA+AGG + chr1_1:62618205-62618224 Msa0034560:CDS 30.0%
!!! GGAGATTTTTCACTTTTTAG+AGG - chr1_1:62618842-62618861 None:intergenic 30.0%
GACATAATAGGGGATTTATA+CGG - chr1_1:62618863-62618882 None:intergenic 30.0%
CAGATCTGCAATTTATAGTA+TGG + chr1_1:62618955-62618974 Msa0034560:CDS 30.0%
GTTGGATAAATTCTGGTATA+CGG - chr1_1:62618989-62619008 None:intergenic 30.0%
ATTGGATCAAATTCCTGATA+TGG + chr1_1:62619064-62619083 Msa0034560:intron 30.0%
!!! AGGTATCTTATTAGCTTTTG+CGG + chr1_1:62619234-62619253 Msa0034560:intron 30.0%
!!! TGTTTTCTCCTTATTTTCAC+AGG + chr1_1:62619257-62619276 Msa0034560:intron 30.0%
!!! GTTTTCTCCTTATTTTCACA+GGG + chr1_1:62619258-62619277 Msa0034560:intron 30.0%
!!! TTTTCTCCTTATTTTCACAG+GGG + chr1_1:62619259-62619278 Msa0034560:intron 30.0%
AAAGCGTAGAAATTTAGCAA+CGG + chr1_1:62619284-62619303 Msa0034560:CDS 30.0%
TTAACTTTATCTAGCAGAAC+AGG - chr1_1:62619474-62619493 None:intergenic 30.0%
! GATTCAGATGATTTTTCTCT+GGG - chr1_1:62619615-62619634 None:intergenic 30.0%
! TGATTCAGATGATTTTTCTC+TGG - chr1_1:62619616-62619635 None:intergenic 30.0%
GAGAAAAATCATCTGAATCA+AGG + chr1_1:62619616-62619635 Msa0034560:CDS 30.0%
TTATTTCCTTGTAAACTGTC+CGG - chr1_1:62619741-62619760 None:intergenic 30.0%
AATAATTTGGATGGCACATT+TGG + chr1_1:62619756-62619775 Msa0034560:CDS 30.0%
GTCAATTTCACATAGAGATA+AGG + chr1_1:62619809-62619828 Msa0034560:CDS 30.0%
TCCTCTATTAAAGAATTCTC+TGG + chr1_1:62620290-62620309 Msa0034560:CDS 30.0%
TCCAGAGAATTCTTTAATAG+AGG - chr1_1:62620294-62620313 None:intergenic 30.0%
! AAAAAGCTCCATTGTTATTG+CGG + chr1_1:62620368-62620387 Msa0034560:CDS 30.0%
! GAACCAAAAGTTGTTATTGT+AGG - chr1_1:62620558-62620577 None:intergenic 30.0%
! AACCTTGAAAACATTTTGCT+TGG - chr1_1:62620775-62620794 None:intergenic 30.0%
!! TCAAAAGAAGCACCAAATTT+CGG - chr1_1:62620846-62620865 None:intergenic 30.0%
!!! AGTTTTGTTGTTACTTTTGG+GGG + chr1_1:62621106-62621125 Msa0034560:intron 30.0%
TAGCTACATATACCTTTACT+TGG + chr1_1:62621180-62621199 Msa0034560:intron 30.0%
TGAAAGTTCAAACCAAGTAA+AGG - chr1_1:62621195-62621214 None:intergenic 30.0%
! TTTACTTGGTTTGAACTTTC+AGG + chr1_1:62621194-62621213 Msa0034560:intron 30.0%
TCTACACTATCAAAAGTTTG+TGG - chr1_1:62621316-62621335 None:intergenic 30.0%
AAAGTTTGTGAATCTGATAG+TGG + chr1_1:62621524-62621543 Msa0034560:CDS 30.0%
! AAAATACCGGATTTTCTGTT+AGG + chr1_1:62621564-62621583 Msa0034560:CDS 30.0%
! AAATACCGGATTTTCTGTTA+GGG + chr1_1:62621565-62621584 Msa0034560:CDS 30.0%
!! AATCAAAATAATGGGTCTCT+TGG + chr1_1:62621671-62621690 Msa0034560:CDS 30.0%
GAAAGGAAGAAGAAAATGAA+GGG - chr1_1:62621703-62621722 None:intergenic 30.0%
ATTTGATATGAGAGATGGAA+AGG - chr1_1:62621720-62621739 None:intergenic 30.0%
! ACAACTTCCCTTTTCAAATT+CGG + chr1_1:62621983-62622002 Msa0034560:CDS 30.0%
AAAGGAACCGAATTTGAAAA+GGG - chr1_1:62621993-62622012 None:intergenic 30.0%
AGTAGAAGTTGTAAATACAC+CGG - chr1_1:62622266-62622285 None:intergenic 30.0%
GTAAGACAGATATTTCTTCT+GGG + chr1_1:62622338-62622357 Msa0034560:CDS 30.0%
CTCATCTGATCATTATTAAC+TGG - chr1_1:62622772-62622791 None:intergenic 30.0%
TACAAAATTTGATTGAACCG+GGG - chr1_1:62622869-62622888 None:intergenic 30.0%
TGCTGTTAGGGTTTATGATT+AGG + chr1_1:62614562-62614581 Msa0034560:intron 35.0%
! TGTGTCCAAATAGTTGTTTC+CGG + chr1_1:62614881-62614900 Msa0034560:intron 35.0%
AAACACCGGAAACAACTATT+TGG - chr1_1:62614889-62614908 None:intergenic 35.0%
! AGATGTTCTGGTGTGTTTTA+AGG + chr1_1:62615185-62615204 Msa0034560:intron 35.0%
!! AAGCCTTAGGTTTAGTTTGA+TGG + chr1_1:62615233-62615252 Msa0034560:intron 35.0%
! TTTGTCAGCAACAAGACTTT+TGG + chr1_1:62615439-62615458 Msa0034560:intron 35.0%
AGTGTGTCACAATAAGCATT+TGG + chr1_1:62615636-62615655 Msa0034560:intron 35.0%
GTGTGTCACAATAAGCATTT+GGG + chr1_1:62615637-62615656 Msa0034560:intron 35.0%
ATCCACAGAAAAGATACAGA+TGG - chr1_1:62615732-62615751 None:intergenic 35.0%
! TGTATCTTTTCTGTGGATGT+AGG + chr1_1:62615734-62615753 Msa0034560:intron 35.0%
! GTATCTTTTCTGTGGATGTA+GGG + chr1_1:62615735-62615754 Msa0034560:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr1_1:62615948-62615967 Msa0034560:intron 35.0%
TCATGCACTTCATTGATATG+TGG + chr1_1:62616148-62616167 Msa0034560:intron 35.0%
! TGGTTTTTATGATTCAGGGT+TGG + chr1_1:62616168-62616187 Msa0034560:intron 35.0%
ATTCATATCACGATCCGATT+TGG - chr1_1:62616797-62616816 None:intergenic 35.0%
GCAATCTTAGAAATTGGGTT+TGG - chr1_1:62616887-62616906 None:intergenic 35.0%
!! ATCTAGTAGCTTGTTCATGT+TGG + chr1_1:62616946-62616965 Msa0034560:intron 35.0%
TTCATGTTGGATTGCAGAAT+TGG + chr1_1:62616959-62616978 Msa0034560:intron 35.0%
! GGCTTAATTTGGATTGTTGA+TGG + chr1_1:62616980-62616999 Msa0034560:intron 35.0%
!!! CTACTTTTATTTTTCCCCGT+AGG + chr1_1:62617087-62617106 Msa0034560:intron 35.0%
CTGCAATGTTACCTATTGAT+TGG + chr1_1:62617270-62617289 Msa0034560:intron 35.0%
! TGTTTTGTATCCTGTGGATT+AGG + chr1_1:62617484-62617503 Msa0034560:intron 35.0%
AGTTGTTCAAATAGCATTCC+TGG + chr1_1:62617632-62617651 Msa0034560:intron 35.0%
!!! TGTACCTTTTGGGATGTTTT+TGG + chr1_1:62618049-62618068 Msa0034560:intron 35.0%
TCAACCAAAAACATCCCAAA+AGG - chr1_1:62618056-62618075 None:intergenic 35.0%
!!! ATGTTTTTGGTCCATACAAC+AGG + chr1_1:62618084-62618103 Msa0034560:intron 35.0%
TCAGAACCAATATTACCTTC+TGG + chr1_1:62618197-62618216 Msa0034560:CDS 35.0%
! TATTCTTCCTTTTGTCCAGA+AGG - chr1_1:62618215-62618234 None:intergenic 35.0%
! GTTTTCAGTCCCATTTTCTA+CGG - chr1_1:62618252-62618271 None:intergenic 35.0%
TTTCCTATGTAATTGGGACT+TGG + chr1_1:62618480-62618499 Msa0034560:intron 35.0%
GATTACTTCGTAATGTCCAT+AGG + chr1_1:62618694-62618713 Msa0034560:intron 35.0%
TTGGCACAATCGACATAATA+GGG - chr1_1:62618874-62618893 None:intergenic 35.0%
! TATTATGTCGATTGTGCCAA+GGG + chr1_1:62618874-62618893 Msa0034560:CDS 35.0%
CACACTGCAATTCATGAAAA+CGG + chr1_1:62618908-62618927 Msa0034560:CDS 35.0%
AGTAGAGGTTGGATAAATTC+TGG - chr1_1:62618996-62619015 None:intergenic 35.0%
TAGAATTAGAGAGCCATATC+AGG - chr1_1:62619080-62619099 None:intergenic 35.0%
ATATGGCTCTCTAATTCTAC+AGG + chr1_1:62619081-62619100 Msa0034560:intron 35.0%
TATGGCTCTCTAATTCTACA+GGG + chr1_1:62619082-62619101 Msa0034560:intron 35.0%
TCCTGTCTTTCAGATAATAC+AGG + chr1_1:62619214-62619233 Msa0034560:intron 35.0%
ACCTGTATTATCTGAAAGAC+AGG - chr1_1:62619218-62619237 None:intergenic 35.0%
CTTTATCCCCTGTGAAAATA+AGG - chr1_1:62619268-62619287 None:intergenic 35.0%
! AATTTTTGTAGCCATCTCAC+TGG - chr1_1:62619565-62619584 None:intergenic 35.0%
CATAGAGATAAGGGTGAAAA+CGG + chr1_1:62619819-62619838 Msa0034560:CDS 35.0%
GAAGAAGCAACAAGTTTCAA+TGG - chr1_1:62619846-62619865 None:intergenic 35.0%
! TGTTGCTTCTTCCAATGAAT+CGG + chr1_1:62619854-62619873 Msa0034560:CDS 35.0%
! TACAATAGGAACCGATTCAT+TGG - chr1_1:62619868-62619887 None:intergenic 35.0%
AACTTGCATGAAACTGCAAA+CGG - chr1_1:62620069-62620088 None:intergenic 35.0%
! AACAATCATGATCTGAGGTT+GGG - chr1_1:62620254-62620273 None:intergenic 35.0%
AAGAGAACAATCATGATCTG+AGG - chr1_1:62620259-62620278 None:intergenic 35.0%
ATTAAAGAATTCTCTGGACC+TGG + chr1_1:62620296-62620315 Msa0034560:CDS 35.0%
TTAAAGAATTCTCTGGACCT+GGG + chr1_1:62620297-62620316 Msa0034560:CDS 35.0%
AACTTTGTCCGCAATAACAA+TGG - chr1_1:62620379-62620398 None:intergenic 35.0%
AATACCACAGATGATGTTGA+GGG - chr1_1:62620435-62620454 None:intergenic 35.0%
AGCTAATGTTAAGACATCTG+TGG + chr1_1:62620512-62620531 Msa0034560:CDS 35.0%
! GCACCTACAATAACAACTTT+TGG + chr1_1:62620552-62620571 Msa0034560:CDS 35.0%
! AACTTCTGTTGCTTCATCAA+AGG + chr1_1:62620665-62620684 Msa0034560:CDS 35.0%
!! TTGGTGTCAAAGTTTACTGA+TGG - chr1_1:62620756-62620775 None:intergenic 35.0%
! CACCAAGCAAAATGTTTTCA+AGG + chr1_1:62620770-62620789 Msa0034560:CDS 35.0%
! CTGATGATGAAGCAGTAAAT+GGG - chr1_1:62620806-62620825 None:intergenic 35.0%
! ACTGATGATGAAGCAGTAAA+TGG - chr1_1:62620807-62620826 None:intergenic 35.0%
TTTACTGCTTCATCATCAGT+TGG + chr1_1:62620807-62620826 Msa0034560:CDS 35.0%
GATGTGAAGAGAATTGTGTT+CGG - chr1_1:62620932-62620951 None:intergenic 35.0%
TTAGACCCAATTCCCTTAAA+TGG + chr1_1:62621073-62621092 Msa0034560:intron 35.0%
! TACCGTCTTCAGTCTTTTAT+TGG + chr1_1:62621254-62621273 Msa0034560:intron 35.0%
! ACCGTCTTCAGTCTTTTATT+GGG + chr1_1:62621255-62621274 Msa0034560:intron 35.0%
TATGGCACATGTGAATCATA+TGG - chr1_1:62621371-62621390 None:intergenic 35.0%
! TCTGTTCAAGTTTGATCGTA+TGG - chr1_1:62621389-62621408 None:intergenic 35.0%
GGAAAGGAAGAAGAAAATGA+AGG - chr1_1:62621704-62621723 None:intergenic 35.0%
TGATACAAGAAGAGATGGAA+CGG - chr1_1:62621807-62621826 None:intergenic 35.0%
AGTTGACATGATAATTCCAG+TGG - chr1_1:62621894-62621913 None:intergenic 35.0%
GAAAGGAACCGAATTTGAAA+AGG - chr1_1:62621994-62622013 None:intergenic 35.0%
GGTTTATCTGTATCATCTTC+TGG + chr1_1:62622028-62622047 Msa0034560:CDS 35.0%
GGTAAGACAGATATTTCTTC+TGG + chr1_1:62622337-62622356 Msa0034560:CDS 35.0%
TTTGTGGCAGAACTTAAAGA+AGG - chr1_1:62622376-62622395 None:intergenic 35.0%
TTCAATTCCGGTACAACATT+TGG + chr1_1:62622451-62622470 Msa0034560:CDS 35.0%
GAACCAAATAGAGAATTGCT+GGG - chr1_1:62622559-62622578 None:intergenic 35.0%
CAAAGGTGATGAACTAAATG+AGG - chr1_1:62622581-62622600 None:intergenic 35.0%
! TTTAGTTCATCACCTTTGTC+CGG + chr1_1:62622583-62622602 Msa0034560:CDS 35.0%
TAATGATCAGATGAGTATGG+TGG + chr1_1:62622777-62622796 Msa0034560:CDS 35.0%
AAGGAGAAGAATCCATACGA+AGG + chr1_1:62614178-62614197 Msa0034560:CDS 40.0%
AACCCTAACAGCAACAACAA+CGG + chr1_1:62614283-62614302 Msa0034560:CDS 40.0%
! AACCGTTGTTGTTGCTGTTA+GGG - chr1_1:62614288-62614307 None:intergenic 40.0%
AAACCTGAAGAATTAGGAGC+AGG - chr1_1:62614409-62614428 None:intergenic 40.0%
TTAACTATGAGGCATGACAC+CGG + chr1_1:62614646-62614665 Msa0034560:intron 40.0%
GTAATTGCATTTGTCGGTGT+CGG + chr1_1:62614732-62614751 Msa0034560:intron 40.0%
! TAATTGCATTTGTCGGTGTC+GGG + chr1_1:62614733-62614752 Msa0034560:intron 40.0%
TGAACATGTCTTCCATCAGA+AGG + chr1_1:62614759-62614778 Msa0034560:intron 40.0%
GAACATGTCTTCCATCAGAA+GGG + chr1_1:62614760-62614779 Msa0034560:intron 40.0%
GTAGATGCATCGAAAACTCT+TGG + chr1_1:62614966-62614985 Msa0034560:intron 40.0%
!! AAAGTCTTGGTGTCTTAGAC+AGG + chr1_1:62615113-62615132 Msa0034560:intron 40.0%
TGTTCATGAGGTAGATGTTC+TGG + chr1_1:62615173-62615192 Msa0034560:intron 40.0%
! AGGCTTTTTGTTGAGACTCT+AGG - chr1_1:62615219-62615238 None:intergenic 40.0%
GAGTCTCAACAAAAAGCCTT+AGG + chr1_1:62615220-62615239 Msa0034560:intron 40.0%
!!! GGATATTTTGGCATTTCAGC+TGG + chr1_1:62615254-62615273 Msa0034560:intron 40.0%
TGTCATGTTCTATATGCTCC+TGG + chr1_1:62615364-62615383 Msa0034560:intron 40.0%
!! TACTTTAGAACTTCCAGTCC+AGG - chr1_1:62615385-62615404 None:intergenic 40.0%
!! TTTTTCAACGGGTTTTGTGG+TGG + chr1_1:62615574-62615593 Msa0034560:intron 40.0%
AATAAGCATTTGGGTGTCCT+GGG + chr1_1:62615646-62615665 Msa0034560:intron 40.0%
! TGCCATCTGTATCTTTTCTG+TGG + chr1_1:62615727-62615746 Msa0034560:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr1_1:62615891-62615910 Msa0034560:intron 40.0%
GTTGGAACAAGAAATGAGAC+AGG + chr1_1:62616186-62616205 Msa0034560:CDS 40.0%
TCAAGAAGAAGCTGTAGAGA+TGG + chr1_1:62616216-62616235 Msa0034560:CDS 40.0%
GATGGAACAAGAAATGAGAC+AGG + chr1_1:62616234-62616253 Msa0034560:CDS 40.0%
TGGCTTAAGTAGTACGCATA+TGG + chr1_1:62616611-62616630 Msa0034560:intron 40.0%
TAAGTAGTACGCATATGGCT+TGG + chr1_1:62616616-62616635 Msa0034560:intron 40.0%
AGAGTCTATTCTAGATCCGT+TGG + chr1_1:62616711-62616730 Msa0034560:intron 40.0%
GAGTCTATTCTAGATCCGTT+GGG + chr1_1:62616712-62616731 Msa0034560:intron 40.0%
TTTGTACTCCTGAGCATGAA+GGG + chr1_1:62616756-62616775 Msa0034560:intron 40.0%
GTGTGGTAAGAGTTCCAAAT+CGG + chr1_1:62616780-62616799 Msa0034560:intron 40.0%
!! AAAGCTGGCTTGTAAGGTAA+GGG - chr1_1:62616847-62616866 None:intergenic 40.0%
TGAACAAGCTACTAGATCGT+GGG - chr1_1:62616943-62616962 None:intergenic 40.0%
ATGAACAAGCTACTAGATCG+TGG - chr1_1:62616944-62616963 None:intergenic 40.0%
ACACGGTTTCACCAATCAAT+AGG - chr1_1:62617284-62617303 None:intergenic 40.0%
TCATTTCCCATACGAGAAAC+AGG + chr1_1:62617328-62617347 Msa0034560:intron 40.0%
! TTGCAACCTGTTTCTCGTAT+GGG - chr1_1:62617337-62617356 None:intergenic 40.0%
! TTTGCAACCTGTTTCTCGTA+TGG - chr1_1:62617338-62617357 None:intergenic 40.0%
CAGGTTGCAAAAGAATCTTC+TGG + chr1_1:62617347-62617366 Msa0034560:intron 40.0%
!! ATTGTTCTGACTCGGATCAA+GGG + chr1_1:62617411-62617430 Msa0034560:CDS 40.0%
TGAAGCATAAGACTTTCACC+AGG + chr1_1:62617459-62617478 Msa0034560:CDS 40.0%
AAGATATGGACATCAGGAAG+AGG - chr1_1:62617884-62617903 None:intergenic 40.0%
TTGATATGGACATCAGGAAG+AGG - chr1_1:62617998-62618017 None:intergenic 40.0%
TCAATCTCAGACCTGTTGTA+TGG - chr1_1:62618098-62618117 None:intergenic 40.0%
AGAAGAGAAGAGGTCAGAAA+TGG + chr1_1:62618169-62618188 Msa0034560:CDS 40.0%
! TTTTCTACGGTGGGTGTTTT+GGG - chr1_1:62618239-62618258 None:intergenic 40.0%
! ATTTTCTACGGTGGGTGTTT+TGG - chr1_1:62618240-62618259 None:intergenic 40.0%
AAAACACCCACCGTAGAAAA+TGG + chr1_1:62618239-62618258 Msa0034560:CDS 40.0%
AAACACCCACCGTAGAAAAT+GGG + chr1_1:62618240-62618259 Msa0034560:CDS 40.0%
! CAGGTTGAGTTAATGCAAGA+TGG - chr1_1:62618274-62618293 None:intergenic 40.0%
TCACATACACTGGAAGTAAC+AGG - chr1_1:62618293-62618312 None:intergenic 40.0%
TAAGGCAAGTTCACATACAC+TGG - chr1_1:62618303-62618322 None:intergenic 40.0%
ACTCCAAGTCCCAATTACAT+AGG - chr1_1:62618486-62618505 None:intergenic 40.0%
ATGTCCATAGGTTCCTATTG+AGG + chr1_1:62618706-62618725 Msa0034560:intron 40.0%
ACATCCTCAATAGGAACCTA+TGG - chr1_1:62618713-62618732 None:intergenic 40.0%
! TAAGCTTTTGCAAGCTCTAC+AGG - chr1_1:62618743-62618762 None:intergenic 40.0%
AGAGCTTGCAAAAGCTTACA+TGG + chr1_1:62618745-62618764 Msa0034560:CDS 40.0%
GAGCTTGCAAAAGCTTACAT+GGG + chr1_1:62618746-62618765 Msa0034560:CDS 40.0%
AGCTTGCAAAAGCTTACATG+GGG + chr1_1:62618747-62618766 Msa0034560:CDS 40.0%
TGGCACAATCGACATAATAG+GGG - chr1_1:62618873-62618892 None:intergenic 40.0%
CTTGGCACAATCGACATAAT+AGG - chr1_1:62618875-62618894 None:intergenic 40.0%
! CTATTATGTCGATTGTGCCA+AGG + chr1_1:62618873-62618892 Msa0034560:CDS 40.0%
TTATCCAACCTCTACTCTCA+AGG + chr1_1:62619000-62619019 Msa0034560:CDS 40.0%
ATGGATCATGCCATGTTTAC+CGG + chr1_1:62619154-62619173 Msa0034560:CDS 40.0%
TTGTGTAGATCCGGTAAACA+TGG - chr1_1:62619167-62619186 None:intergenic 40.0%
ATGTTTACCGGATCTACACA+AGG + chr1_1:62619166-62619185 Msa0034560:CDS 40.0%
TGTTTACCGGATCTACACAA+GGG + chr1_1:62619167-62619186 Msa0034560:CDS 40.0%
TTATACCCCTTGTGTAGATC+CGG - chr1_1:62619176-62619195 None:intergenic 40.0%
!!! GATTAGACTTTTGACGGACT+CGG - chr1_1:62619341-62619360 None:intergenic 40.0%
GCTCTATCTGTCTATAGGAA+CGG + chr1_1:62619402-62619421 Msa0034560:CDS 40.0%
ATCTGTCTATAGGAACGGAT+TGG + chr1_1:62619407-62619426 Msa0034560:CDS 40.0%
! TCTGTCTATAGGAACGGATT+GGG + chr1_1:62619408-62619427 Msa0034560:CDS 40.0%
GGCTTATGAAAGGAAGATGA+GGG - chr1_1:62619453-62619472 None:intergenic 40.0%
AGGCTTATGAAAGGAAGATG+AGG - chr1_1:62619454-62619473 None:intergenic 40.0%
TAGCAGAACAGGCTTATGAA+AGG - chr1_1:62619463-62619482 None:intergenic 40.0%
! AGTTCCACTCACGTTTTCTT+CGG - chr1_1:62619505-62619524 None:intergenic 40.0%
GATGAACTATCACTCACAAC+TGG - chr1_1:62619645-62619664 None:intergenic 40.0%
TTATCACCTTCAATGCTACG+TGG + chr1_1:62619672-62619691 Msa0034560:CDS 40.0%
AAATTGCCGGACAGTTTACA+AGG + chr1_1:62619732-62619751 Msa0034560:CDS 40.0%
GTCTCTGTAGTGGTTACAAT+AGG - chr1_1:62619882-62619901 None:intergenic 40.0%
GACTTGATTGCTTGACTTTG+TGG - chr1_1:62619904-62619923 None:intergenic 40.0%
! ATGCTCGCTTCTTTTGTGTA+GGG - chr1_1:62619968-62619987 None:intergenic 40.0%
! AATGCTCGCTTCTTTTGTGT+AGG - chr1_1:62619969-62619988 None:intergenic 40.0%
! GAACAATCATGATCTGAGGT+TGG - chr1_1:62620255-62620274 None:intergenic 40.0%
CTCTATAAGCATTATCACCC+AGG - chr1_1:62620317-62620336 None:intergenic 40.0%
TTCCGCAGAAGAAAAAGAGA+CGG - chr1_1:62620340-62620359 None:intergenic 40.0%
ATTGCGGACAAAGTTTCTTC+TGG + chr1_1:62620384-62620403 Msa0034560:CDS 40.0%
CAATACCACAGATGATGTTG+AGG - chr1_1:62620436-62620455 None:intergenic 40.0%
GCTCATGTTAAGACAACTGA+TGG + chr1_1:62620486-62620505 Msa0034560:CDS 40.0%
CATGTTAAGACAACTGATGG+TGG + chr1_1:62620489-62620508 Msa0034560:CDS 40.0%
ACAAGCCTGCATTACCAAAT+GGG + chr1_1:62620580-62620599 Msa0034560:CDS 40.0%
ACCAAATACTGGAGCTGATT+TGG - chr1_1:62620697-62620716 None:intergenic 40.0%
ATCAGCTCCAGTATTTGGTT+TGG + chr1_1:62620698-62620717 Msa0034560:CDS 40.0%
!! TCCAGTATTTGGTTTGGAGA+AGG + chr1_1:62620704-62620723 Msa0034560:CDS 40.0%
ACCTTCTCCAAACCAAATAC+TGG - chr1_1:62620708-62620727 None:intergenic 40.0%
GATGAAGCAGTAAATGGGAT+TGG - chr1_1:62620801-62620820 None:intergenic 40.0%
CGCAACCATTTAAGGGAATT+GGG - chr1_1:62621081-62621100 None:intergenic 40.0%
CCAATTCCCTTAAATGGTTG+CGG + chr1_1:62621079-62621098 Msa0034560:intron 40.0%
CAATTCCCTTAAATGGTTGC+GGG + chr1_1:62621080-62621099 Msa0034560:intron 40.0%
AATTCCCTTAAATGGTTGCG+GGG + chr1_1:62621081-62621100 Msa0034560:intron 40.0%
CCCCAATAAAAGACTGAAGA+CGG - chr1_1:62621259-62621278 None:intergenic 40.0%
! CCGTCTTCAGTCTTTTATTG+GGG + chr1_1:62621256-62621275 Msa0034560:intron 40.0%
!! AATCTGATAGTGGTGATGCT+GGG + chr1_1:62621534-62621553 Msa0034560:CDS 40.0%
GCTGGGACTGATAAAAATAC+CGG + chr1_1:62621551-62621570 Msa0034560:CDS 40.0%
!! AATAATGGGTCTCTTGGTTC+AGG + chr1_1:62621677-62621696 Msa0034560:CDS 40.0%
GAACGGAAGAAGAGAATGAA+GGG - chr1_1:62621790-62621809 None:intergenic 40.0%
TTATTTGATGCAGCAAGCAC+AGG - chr1_1:62621917-62621936 None:intergenic 40.0%
!! AGTTTTAGCAGCACTGCATT+TGG + chr1_1:62622097-62622116 Msa0034560:CDS 40.0%
TGAAGAGCTGAACCCAAAAA+TGG - chr1_1:62622158-62622177 None:intergenic 40.0%
TGCAGATGATTGAACTGACT+GGG - chr1_1:62622293-62622312 None:intergenic 40.0%
ATGCAGATGATTGAACTGAC+TGG - chr1_1:62622294-62622313 None:intergenic 40.0%
! GCCACTAACGTTTTCAATTC+CGG + chr1_1:62622439-62622458 Msa0034560:CDS 40.0%
ACCGGAATTGAAAACGTTAG+TGG - chr1_1:62622443-62622462 None:intergenic 40.0%
! GCACAGGCTCTAGTTTATTT+GGG + chr1_1:62622518-62622537 Msa0034560:CDS 40.0%
! CACAGGCTCTAGTTTATTTG+GGG + chr1_1:62622519-62622538 Msa0034560:CDS 40.0%
CAACCCAGCAATTCTCTATT+TGG + chr1_1:62622553-62622572 Msa0034560:CDS 40.0%
GGAACCAAATAGAGAATTGC+TGG - chr1_1:62622560-62622579 None:intergenic 40.0%
TTAGTTCATCACCTTTGTCC+GGG + chr1_1:62622584-62622603 Msa0034560:CDS 40.0%
GCTGAAGTGAATGAAAACTG+AGG - chr1_1:62622682-62622701 None:intergenic 40.0%
!! TGTTGACTTGCAAACTGGAA+AGG - chr1_1:62622922-62622941 None:intergenic 40.0%
!! TGTTCTGTTGACTTGCAAAC+TGG - chr1_1:62622927-62622946 None:intergenic 40.0%
TCAACAGAACATTGCTTCAC+AGG + chr1_1:62622936-62622955 Msa0034560:CDS 40.0%
! TGTTGACTAGCAAACTGGAA+AGG - chr1_1:62622985-62623004 None:intergenic 40.0%
! TGTTCTGTTGACTAGCAAAC+TGG - chr1_1:62622990-62623009 None:intergenic 40.0%
! AGTCTGGAATTTAATGCAGG+AGG + chr1_1:62623048-62623067 Msa0034560:CDS 40.0%
AATTTAATGCAGGAGGAGGA+GGG + chr1_1:62623055-62623074 Msa0034560:CDS 40.0%
TGCAAACGCAGGGCAAATTA+GGG - chr1_1:62614114-62614133 None:intergenic 45.0%
ATGCAAACGCAGGGCAAATT+AGG - chr1_1:62614115-62614134 None:intergenic 45.0%
GAGAGAGAAATGCAAACGCA+GGG - chr1_1:62614124-62614143 None:intergenic 45.0%
AGAGAGAGAAATGCAAACGC+AGG - chr1_1:62614125-62614144 None:intergenic 45.0%
TCTCTCTCTCTCTGAACGAA+CGG + chr1_1:62614138-62614157 Msa0034560:five_prime_UTR 45.0%
GAGAAGAATCCATACGAAGG+TGG + chr1_1:62614181-62614200 Msa0034560:CDS 45.0%
AATCCATACGAAGGTGGAAC+CGG + chr1_1:62614187-62614206 Msa0034560:CDS 45.0%
! CAACCGTTGTTGTTGCTGTT+AGG - chr1_1:62614289-62614308 None:intergenic 45.0%
CTAACAGCAACAACAACGGT+TGG + chr1_1:62614287-62614306 Msa0034560:CDS 45.0%
ATGAGTGATGAGTCTGTGAG+CGG - chr1_1:62614332-62614351 None:intergenic 45.0%
TGAAGAATTAGGAGCAGGAG+GGG - chr1_1:62614404-62614423 None:intergenic 45.0%
CTGAAGAATTAGGAGCAGGA+GGG - chr1_1:62614405-62614424 None:intergenic 45.0%
GATCTCGATGTATCAGTGTC+CGG - chr1_1:62614668-62614687 None:intergenic 45.0%
GGACACTGATACATCGAGAT+CGG + chr1_1:62614667-62614686 Msa0034560:intron 45.0%
!! TTTAGCACTGACCCTTCTGA+TGG - chr1_1:62614774-62614793 None:intergenic 45.0%
GAGTGTTTCGGGAATGCTTA+AGG + chr1_1:62614806-62614825 Msa0034560:intron 45.0%
TGTTTCGGGAATGCTTAAGG+TGG + chr1_1:62614809-62614828 Msa0034560:intron 45.0%
GATGCATCGAAAACTCTTGG+TGG + chr1_1:62614969-62614988 Msa0034560:intron 45.0%
CATTTCAGCTGGTACTCACA+GGG + chr1_1:62615265-62615284 Msa0034560:intron 45.0%
ATTTCAGCTGGTACTCACAG+GGG + chr1_1:62615266-62615285 Msa0034560:intron 45.0%
TGTTCTATATGCTCCTGGAC+TGG + chr1_1:62615369-62615388 Msa0034560:intron 45.0%
CAATAAGCATTTGGGTGTCC+TGG + chr1_1:62615645-62615664 Msa0034560:intron 45.0%
ATAAGCATTTGGGTGTCCTG+GGG + chr1_1:62615647-62615666 Msa0034560:intron 45.0%
! TCCCATATCGACTGAAGATG+TGG + chr1_1:62616591-62616610 Msa0034560:intron 45.0%
GCCACATCTTCAGTCGATAT+GGG - chr1_1:62616595-62616614 None:intergenic 45.0%
AGCCACATCTTCAGTCGATA+TGG - chr1_1:62616596-62616615 None:intergenic 45.0%
GTTTGTACTCCTGAGCATGA+AGG + chr1_1:62616755-62616774 Msa0034560:intron 45.0%
!! CAAAGCTGGCTTGTAAGGTA+AGG - chr1_1:62616848-62616867 None:intergenic 45.0%
CTAACTCATCCTCACAAAGC+TGG - chr1_1:62616862-62616881 None:intergenic 45.0%
! AGATTCGACCTGTGGGTTAT+AGG + chr1_1:62616917-62616936 Msa0034560:intron 45.0%
TTACCCCACAACAACACCTA+CGG - chr1_1:62617106-62617125 None:intergenic 45.0%
TTGTGGGGTAACCTACATTG+TGG + chr1_1:62617115-62617134 Msa0034560:intron 45.0%
GGCAATCAACAAAGAGCAGT+TGG + chr1_1:62617368-62617387 Msa0034560:CDS 45.0%
!! GATTGTTCTGACTCGGATCA+AGG + chr1_1:62617410-62617429 Msa0034560:CDS 45.0%
!! TTGTTCTGACTCGGATCAAG+GGG + chr1_1:62617412-62617431 Msa0034560:CDS 45.0%
CACAGGATACAAAACATGCC+TGG - chr1_1:62617480-62617499 None:intergenic 45.0%
! CAGGCATGTTTTGTATCCTG+TGG + chr1_1:62617478-62617497 Msa0034560:intron 45.0%
TGACAGCACTTATGCAGTCA+AGG + chr1_1:62618123-62618142 Msa0034560:CDS 45.0%
GACTGTAGATGCAGCTGTTA+GGG + chr1_1:62618145-62618164 Msa0034560:CDS 45.0%
ACTGTAGATGCAGCTGTTAG+GGG + chr1_1:62618146-62618165 Msa0034560:CDS 45.0%
! TCAGTCCCATTTTCTACGGT+GGG - chr1_1:62618248-62618267 None:intergenic 45.0%
! TTCAGTCCCATTTTCTACGG+TGG - chr1_1:62618249-62618268 None:intergenic 45.0%
! TGGGACTTGGAGTCTTGTAA+AGG + chr1_1:62618493-62618512 Msa0034560:intron 45.0%
! GGGACTTGGAGTCTTGTAAA+GGG + chr1_1:62618494-62618513 Msa0034560:intron 45.0%
GGTGAAGCAACATCCTCAAT+AGG - chr1_1:62618722-62618741 None:intergenic 45.0%
TAAATTGCAGATCTGCCACG+AGG - chr1_1:62618950-62618969 None:intergenic 45.0%
CAAACCTTGAGAGTAGAGGT+TGG - chr1_1:62619007-62619026 None:intergenic 45.0%
AAGGCAAACCTTGAGAGTAG+AGG - chr1_1:62619011-62619030 None:intergenic 45.0%
TCTCTAATTCTACAGGGTGG+CGG + chr1_1:62619088-62619107 Msa0034560:intron 45.0%
GTTTACCGGATCTACACAAG+GGG + chr1_1:62619168-62619187 Msa0034560:CDS 45.0%
GCAGTGCTCTATCTGTCTAT+AGG + chr1_1:62619397-62619416 Msa0034560:CDS 45.0%
AAGTCCGAAGAAAACGTGAG+TGG + chr1_1:62619498-62619517 Msa0034560:CDS 45.0%
!! ACTGGATTTTGAGGAGGAAG+GGG - chr1_1:62619547-62619566 None:intergenic 45.0%
!! CACTGGATTTTGAGGAGGAA+GGG - chr1_1:62619548-62619567 None:intergenic 45.0%
!! TCACTGGATTTTGAGGAGGA+AGG - chr1_1:62619549-62619568 None:intergenic 45.0%
!! CATCTCACTGGATTTTGAGG+AGG - chr1_1:62619553-62619572 None:intergenic 45.0%
CTCCTCAAAATCCAGTGAGA+TGG + chr1_1:62619551-62619570 Msa0034560:CDS 45.0%
! AGCCATCTCACTGGATTTTG+AGG - chr1_1:62619556-62619575 None:intergenic 45.0%
GGTAGATGCGTCAAAATTGC+CGG + chr1_1:62619719-62619738 Msa0034560:CDS 45.0%
TGACTTCTGATTCTGAGCAC+TGG - chr1_1:62619793-62619812 None:intergenic 45.0%
TGACTTTGTGGTCTCTGTAG+TGG - chr1_1:62619892-62619911 None:intergenic 45.0%
ATTCCATATGAGTGCACACG+AGG + chr1_1:62619986-62620005 Msa0034560:CDS 45.0%
ATACCTCGTGTGCACTCATA+TGG - chr1_1:62619992-62620011 None:intergenic 45.0%
TGGAAGGAATCAAATGCCCA+TGG - chr1_1:62620132-62620151 None:intergenic 45.0%
! AGCCGTCTCTTTTTCTTCTG+CGG + chr1_1:62620335-62620354 Msa0034560:CDS 45.0%
TGAGGGACTTTCATGTGCAA+TGG - chr1_1:62620418-62620437 None:intergenic 45.0%
AAGTCCCTCAACATCATCTG+TGG + chr1_1:62620428-62620447 Msa0034560:CDS 45.0%
TCTATCGTAAACCCTGTGGA+TGG - chr1_1:62620459-62620478 None:intergenic 45.0%
AGCATCTATCGTAAACCCTG+TGG - chr1_1:62620463-62620482 None:intergenic 45.0%
GACAAGCCTGCATTACCAAA+TGG + chr1_1:62620579-62620598 Msa0034560:CDS 45.0%
!! GTTGACCCATTTGGTAATGC+AGG - chr1_1:62620588-62620607 None:intergenic 45.0%
! GGATTAGCAGTTGACCCATT+TGG - chr1_1:62620597-62620616 None:intergenic 45.0%
GCCAAATCAGCTCCAGTATT+TGG + chr1_1:62620693-62620712 Msa0034560:CDS 45.0%
! GGAGAAGGTTGATCCTTCAA+AGG + chr1_1:62620719-62620738 Msa0034560:CDS 45.0%
! GAAGGTTGATCCTTCAAAGG+AGG + chr1_1:62620722-62620741 Msa0034560:CDS 45.0%
GAAGCAGTAAATGGGATTGG+TGG - chr1_1:62620798-62620817 None:intergenic 45.0%
ACTGCTTCATCATCAGTTGG+TGG + chr1_1:62620810-62620829 Msa0034560:CDS 45.0%
GGTGAGTCTACTCCGAAATT+TGG + chr1_1:62620831-62620850 Msa0034560:CDS 45.0%
!! TGCTTCTTTTGACTCTCAGC+CGG + chr1_1:62620854-62620873 Msa0034560:CDS 45.0%
CCGCAACCATTTAAGGGAAT+TGG - chr1_1:62621082-62621101 None:intergenic 45.0%
CTTTCCCCGCAACCATTTAA+GGG - chr1_1:62621088-62621107 None:intergenic 45.0%
ACTTTCCCCGCAACCATTTA+AGG - chr1_1:62621089-62621108 None:intergenic 45.0%
TGCAGCTTTACTACTGTTGC+TGG + chr1_1:62621482-62621501 Msa0034560:intron 45.0%
!! ACTACTGTTGCTGGTTCAAC+TGG + chr1_1:62621491-62621510 Msa0034560:CDS 45.0%
!! GAATCTGATAGTGGTGATGC+TGG + chr1_1:62621533-62621552 Msa0034560:CDS 45.0%
!! AATAATGGGTCCCTTGCTTC+AGG + chr1_1:62621764-62621783 Msa0034560:CDS 45.0%
GGAACGGAAGAAGAGAATGA+AGG - chr1_1:62621791-62621810 None:intergenic 45.0%
AATGCCACCACTTGCAGAAA+GGG - chr1_1:62621855-62621874 None:intergenic 45.0%
TAATGCCACCACTTGCAGAA+AGG - chr1_1:62621856-62621875 None:intergenic 45.0%
AATTCCAGTGGAAGCAGAAG+TGG - chr1_1:62621882-62621901 None:intergenic 45.0%
GATAAACCTGCTGATGTGAC+AGG - chr1_1:62622016-62622035 None:intergenic 45.0%
!! ATCTTCTGGCTCAAAACCAC+TGG + chr1_1:62622042-62622061 Msa0034560:CDS 45.0%
GCTCAAAACCACTGGAAACT+GGG + chr1_1:62622050-62622069 Msa0034560:CDS 45.0%
AACAGGCAAGATGCAGGAAT+CGG + chr1_1:62622073-62622092 Msa0034560:CDS 45.0%
AGCTCTTCATCAATGACAGC+TGG + chr1_1:62622169-62622188 Msa0034560:CDS 45.0%
AGCCAGTCTCAGAGTTCTTT+CGG + chr1_1:62622196-62622215 Msa0034560:CDS 45.0%
GTTGTAAATACACCGGCAGA+AGG - chr1_1:62622259-62622278 None:intergenic 45.0%
TCTGCATCATCCCCATTGTT+TGG + chr1_1:62622307-62622326 Msa0034560:CDS 45.0%
CTGCATCATCCCCATTGTTT+GGG + chr1_1:62622308-62622327 Msa0034560:CDS 45.0%
TACCAGTCGACCCAAACAAT+GGG - chr1_1:62622321-62622340 None:intergenic 45.0%
TTACCAGTCGACCCAAACAA+TGG - chr1_1:62622322-62622341 None:intergenic 45.0%
ACGTTAGTGGCAGAACTTGA+AGG - chr1_1:62622430-62622449 None:intergenic 45.0%
TCCGGTACAACATTTGGACT+CGG + chr1_1:62622457-62622476 Msa0034560:CDS 45.0%
! GGCACAGGCTCTAGTTTATT+TGG + chr1_1:62622517-62622536 Msa0034560:CDS 45.0%
GAATGAAAACTGAGGAGCTG+AGG - chr1_1:62622674-62622693 None:intergenic 45.0%
CAAACGCAAAGACAGGGTTA+GGG - chr1_1:62622741-62622760 None:intergenic 45.0%
CTGAACCAAACGCAAAGACA+GGG - chr1_1:62622747-62622766 None:intergenic 45.0%
!! GATGAGTATGGTGGACAGTA+TGG + chr1_1:62622786-62622805 Msa0034560:CDS 45.0%
GCAGGTTGTTGACCAAACAT+AGG - chr1_1:62622847-62622866 None:intergenic 45.0%
AAATTTGATTGAACCGGGGC+AGG - chr1_1:62622865-62622884 None:intergenic 45.0%
! TTTGGAGCATCCACTCATTC+AGG + chr1_1:62622889-62622908 Msa0034560:CDS 45.0%
ACTTGCAAACTGGAAAGGAC+TGG - chr1_1:62622917-62622936 None:intergenic 45.0%
ACTAGCAAACTGGAAAGGAC+TGG - chr1_1:62622980-62622999 None:intergenic 45.0%
TGAAATGGAGAAGGGTTCTG+TGG - chr1_1:62623018-62623037 None:intergenic 45.0%
ACAGAACCCTTCTCCATTTC+AGG + chr1_1:62623017-62623036 Msa0034560:CDS 45.0%
CAGAAGCCTGAAATGGAGAA+GGG - chr1_1:62623026-62623045 None:intergenic 45.0%
! GGCAGTCTGGAATTTAATGC+AGG + chr1_1:62623045-62623064 Msa0034560:CDS 45.0%
CTGGAATTTAATGCAGGAGG+AGG + chr1_1:62623051-62623070 Msa0034560:CDS 45.0%
GAATTTAATGCAGGAGGAGG+AGG + chr1_1:62623054-62623073 Msa0034560:CDS 45.0%
ACGTTTACGGAACTTGCCAC+CGG - chr1_1:62614209-62614228 None:intergenic 50.0%
TTCTGCGGAAGGGACGTTTA+CGG - chr1_1:62614222-62614241 None:intergenic 50.0%
! GTCGTTTGAGTTCTGCGGAA+GGG - chr1_1:62614232-62614251 None:intergenic 50.0%
! TTAGGGTTTCTGAGTGCTGC+CGG - chr1_1:62614271-62614290 None:intergenic 50.0%
TGAGTGATGAGTCTGTGAGC+GGG - chr1_1:62614331-62614350 None:intergenic 50.0%
GCTCACAGACTCATCACTCA+TGG + chr1_1:62614331-62614350 Msa0034560:CDS 50.0%
GAAGAATTAGGAGCAGGAGG+GGG - chr1_1:62614403-62614422 None:intergenic 50.0%
CCTGAAGAATTAGGAGCAGG+AGG - chr1_1:62614406-62614425 None:intergenic 50.0%
CCTCCTGCTCCTAATTCTTC+AGG + chr1_1:62614403-62614422 Msa0034560:CDS 50.0%
GCATTTCAGCTGGTACTCAC+AGG + chr1_1:62615264-62615283 Msa0034560:intron 50.0%
TCTGCTTCGCTGCTATAGCA+CGG + chr1_1:62615315-62615334 Msa0034560:intron 50.0%
AACCTAGAGCTTGACCCAAG+TGG - chr1_1:62616738-62616757 None:intergenic 50.0%
!! CCTCACAAAGCTGGCTTGTA+AGG - chr1_1:62616853-62616872 None:intergenic 50.0%
! CCTTACAAGCCAGCTTTGTG+AGG + chr1_1:62616850-62616869 Msa0034560:intron 50.0%
TGAGAGTCAGATTCGACCTG+TGG + chr1_1:62616909-62616928 Msa0034560:intron 50.0%
GAGAGTCAGATTCGACCTGT+GGG + chr1_1:62616910-62616929 Msa0034560:intron 50.0%
!! TTTCCCCGTAGGTGTTGTTG+TGG + chr1_1:62617098-62617117 Msa0034560:intron 50.0%
!! TTCCCCGTAGGTGTTGTTGT+GGG + chr1_1:62617099-62617118 Msa0034560:intron 50.0%
TACCCCACAACAACACCTAC+GGG - chr1_1:62617105-62617124 None:intergenic 50.0%
!! TGTTCTGACTCGGATCAAGG+GGG + chr1_1:62617413-62617432 Msa0034560:CDS 50.0%
GGACTGTAGATGCAGCTGTT+AGG + chr1_1:62618144-62618163 Msa0034560:CDS 50.0%
CTGTTAGGGGAGAAGAGAAG+AGG + chr1_1:62618159-62618178 Msa0034560:CDS 50.0%
CCATGTGAGATAGCTCAGAG+TGG - chr1_1:62618675-62618694 None:intergenic 50.0%
CCACTCTGAGCTATCTCACA+TGG + chr1_1:62618672-62618691 Msa0034560:intron 50.0%
CAAAAGCTTACATGGGGAGC+AGG + chr1_1:62618753-62618772 Msa0034560:CDS 50.0%
ATTGTGCCAAGGGCTACTAC+TGG + chr1_1:62618884-62618903 Msa0034560:CDS 50.0%
TTGTGCCAAGGGCTACTACT+GGG + chr1_1:62618885-62618904 Msa0034560:CDS 50.0%
GGCTCTCTAATTCTACAGGG+TGG + chr1_1:62619085-62619104 Msa0034560:intron 50.0%
CTCTAATTCTACAGGGTGGC+GGG + chr1_1:62619089-62619108 Msa0034560:intron 50.0%
GTCTTCAACCCAGTCTGCAA+TGG + chr1_1:62619135-62619154 Msa0034560:CDS 50.0%
GGCATGATCCATTGCAGACT+GGG - chr1_1:62619146-62619165 None:intergenic 50.0%
TGGCATGATCCATTGCAGAC+TGG - chr1_1:62619147-62619166 None:intergenic 50.0%
!!! TAGACTTTTGACGGACTCGG+CGG - chr1_1:62619338-62619357 None:intergenic 50.0%
!! GATAGAGCACTGCCAGAAAG+AGG - chr1_1:62619390-62619409 None:intergenic 50.0%
!! CTGGATTTTGAGGAGGAAGG+GGG - chr1_1:62619546-62619565 None:intergenic 50.0%
ACCTTCAATGCTACGTGGAC+AGG + chr1_1:62619677-62619696 Msa0034560:CDS 50.0%
GGCTCTTCGAAGCTTGGAAA+TGG + chr1_1:62619698-62619717 Msa0034560:CDS 50.0%
GAGGTTGGGCCATACTATCA+AGG - chr1_1:62620240-62620259 None:intergenic 50.0%
TCTGTGGTATTGCCATCCAC+AGG + chr1_1:62620444-62620463 Msa0034560:CDS 50.0%
CTGTGGTATTGCCATCCACA+GGG + chr1_1:62620445-62620464 Msa0034560:CDS 50.0%
GTTGATCCTTCAAAGGAGGC+TGG + chr1_1:62620726-62620745 Msa0034560:CDS 50.0%
!! GCTTCTTTTGACTCTCAGCC+GGG + chr1_1:62620855-62620874 Msa0034560:CDS 50.0%
ACTAACCTGATTGAGCCTCC+CGG - chr1_1:62620876-62620895 None:intergenic 50.0%
GAAGAGAATTGTGTTCGGCG+AGG - chr1_1:62620927-62620946 None:intergenic 50.0%
CGACGCCCTAACAGAAAATC+CGG - chr1_1:62621573-62621592 None:intergenic 50.0%
! CGGATTTTCTGTTAGGGCGT+CGG + chr1_1:62621571-62621590 Msa0034560:CDS 50.0%
GAATGAAGGGCCTGAAGCAA+GGG - chr1_1:62621777-62621796 None:intergenic 50.0%
AGAATGAAGGGCCTGAAGCA+AGG - chr1_1:62621778-62621797 None:intergenic 50.0%
! AATGCCACTTCTGCTTCCAC+TGG + chr1_1:62621875-62621894 Msa0034560:CDS 50.0%
AAGACGAAGTTGCCACCACT+GGG - chr1_1:62621961-62621980 None:intergenic 50.0%
TCCTTTCCTGTCACATCAGC+AGG + chr1_1:62622007-62622026 Msa0034560:CDS 50.0%
ACCTGCTGATGTGACAGGAA+AGG - chr1_1:62622011-62622030 None:intergenic 50.0%
GGCTCAAAACCACTGGAAAC+TGG + chr1_1:62622049-62622068 Msa0034560:CDS 50.0%
AACCACTGGAAACTGGGAAC+AGG + chr1_1:62622056-62622075 Msa0034560:CDS 50.0%
!!! AGCACAGCGAGTGCCATTTT+TGG + chr1_1:62622142-62622161 Msa0034560:CDS 50.0%
!!! GCACAGCGAGTGCCATTTTT+GGG + chr1_1:62622143-62622162 Msa0034560:CDS 50.0%
!! CACCGAAAGAACTCTGAGAC+TGG - chr1_1:62622201-62622220 None:intergenic 50.0%
GGAACCAAACAGAGAACCAC+TGG - chr1_1:62622227-62622246 None:intergenic 50.0%
ACCAGTCGACCCAAACAATG+GGG - chr1_1:62622320-62622339 None:intergenic 50.0%
GCCGAGTCCAAATGTTGTAC+CGG - chr1_1:62622461-62622480 None:intergenic 50.0%
ACTAGAGTTGACTGCCGAAG+AGG - chr1_1:62622494-62622513 None:intergenic 50.0%
TCGGCAGTCAACTCTAGTAG+TGG + chr1_1:62622496-62622515 Msa0034560:CDS 50.0%
GTCAACTCTAGTAGTGGCAC+AGG + chr1_1:62622502-62622521 Msa0034560:CDS 50.0%
TCATCACCTTTGTCCGGGTT+TGG + chr1_1:62622589-62622608 Msa0034560:CDS 50.0%
! AGTACTGGACGTTCCAAACC+CGG - chr1_1:62622605-62622624 None:intergenic 50.0%
GGTGGAAGCAACAGTAGTAC+TGG - chr1_1:62622620-62622639 None:intergenic 50.0%
CCAAACGCAAAGACAGGGTT+AGG - chr1_1:62622742-62622761 None:intergenic 50.0%
CCTAACCCTGTCTTTGCGTT+TGG + chr1_1:62622739-62622758 Msa0034560:CDS 50.0%
GCTGAACCAAACGCAAAGAC+AGG - chr1_1:62622748-62622767 None:intergenic 50.0%
!! TATGGTGGACAGTATGGCTG+AGG + chr1_1:62622792-62622811 Msa0034560:CDS 50.0%
TGACCAAACATAGGACTCGC+AGG - chr1_1:62622838-62622857 None:intergenic 50.0%
!! AGGACTGGTTCCTGAATGAG+TGG - chr1_1:62622902-62622921 None:intergenic 50.0%
TCACAGGTTTCCACTCCTTC+AGG + chr1_1:62622952-62622971 Msa0034560:CDS 50.0%
!! TGGAAAGGACTGGTTCCTGA+AGG - chr1_1:62622907-62622926 None:intergenic 50.0%
AATGGAGAAGGGTTCTGTGG+AGG - chr1_1:62623015-62623034 None:intergenic 50.0%
CCAGAAGCCTGAAATGGAGA+AGG - chr1_1:62623027-62623046 None:intergenic 50.0%
CCTTCTCCATTTCAGGCTTC+TGG + chr1_1:62623024-62623043 Msa0034560:CDS 50.0%
AGACTGCCAGAAGCCTGAAA+TGG - chr1_1:62623033-62623052 None:intergenic 50.0%
ATTTCAGGCTTCTGGCAGTC+TGG + chr1_1:62623032-62623051 Msa0034560:CDS 50.0%
AGTTTCTCGTTAGGCTCAGG+TGG + chr1_1:62623078-62623097 Msa0034560:CDS 50.0%
! TCAGGTGGTGGTGATAAGTC+TGG + chr1_1:62623093-62623112 Msa0034560:CDS 50.0%
TCTCTCTGAACGAACGGCGA+TGG + chr1_1:62614144-62614163 Msa0034560:exon 55.0%
! CGTCGTTTGAGTTCTGCGGA+AGG - chr1_1:62614233-62614252 None:intergenic 55.0%
! ACGGCGTCGTTTGAGTTCTG+CGG - chr1_1:62614237-62614256 None:intergenic 55.0%
CTATAGCAGCGAAGCAGAGC+AGG - chr1_1:62615313-62615332 None:intergenic 55.0%
!! GGGTTTTGTGGTGGAAGCAG+AGG + chr1_1:62615583-62615602 Msa0034560:intron 55.0%
AGCAGAGGAACTGAGCTGTC+TGG + chr1_1:62615598-62615617 Msa0034560:intron 55.0%
ATTTGGGTGTCCTGGGGCAA+GGG + chr1_1:62615653-62615672 Msa0034560:intron 55.0%
TCTAGATCCGTTGGGCCACT+TGG + chr1_1:62616720-62616739 Msa0034560:intron 55.0%
CTAGATCCGTTGGGCCACTT+GGG + chr1_1:62616721-62616740 Msa0034560:intron 55.0%
! TCCTGAGCATGAAGGGTGTG+TGG + chr1_1:62616763-62616782 Msa0034560:intron 55.0%
ACCACACACCCTTCATGCTC+AGG - chr1_1:62616767-62616786 None:intergenic 55.0%
ATCGTGGGCCTATAACCCAC+AGG - chr1_1:62616928-62616947 None:intergenic 55.0%
!! TCCCCGTAGGTGTTGTTGTG+GGG + chr1_1:62617100-62617119 Msa0034560:intron 55.0%
ACCCCACAACAACACCTACG+GGG - chr1_1:62617104-62617123 None:intergenic 55.0%
CGTGCGATATCCTGCTCGTA+GGG + chr1_1:62618805-62618824 Msa0034560:CDS 55.0%
GTTGTGTCTTCCCTACGAGC+AGG - chr1_1:62618818-62618837 None:intergenic 55.0%
TTTGTGACCCCAAGACCTCG+TGG + chr1_1:62618932-62618951 Msa0034560:CDS 55.0%
AGATCTGCCACGAGGTCTTG+GGG - chr1_1:62618942-62618961 None:intergenic 55.0%
CAGATCTGCCACGAGGTCTT+GGG - chr1_1:62618943-62618962 None:intergenic 55.0%
! GCAGACTGGGTTGAAGACGA+AGG - chr1_1:62619133-62619152 None:intergenic 55.0%
!!! TTTTGACGGACTCGGCGGAT+AGG - chr1_1:62619333-62619352 None:intergenic 55.0%
AAGAGGTGAGCTGGAGCCTT+TGG - chr1_1:62619373-62619392 None:intergenic 55.0%
ACTGCCAGAAAGAGGTGAGC+TGG - chr1_1:62619382-62619401 None:intergenic 55.0%
! GCCTGTCCACGTAGCATTGA+AGG - chr1_1:62619681-62619700 None:intergenic 55.0%
TGGACAGGCTCTTCGAAGCT+TGG + chr1_1:62619692-62619711 Msa0034560:CDS 55.0%
GATCCTTCAAAGGAGGCTGG+TGG + chr1_1:62620729-62620748 Msa0034560:CDS 55.0%
!! TCTTTTGACTCTCAGCCGGG+AGG + chr1_1:62620858-62620877 Msa0034560:CDS 55.0%
AGCTCGTCCCTTTCTGCAAG+TGG + chr1_1:62621845-62621864 Msa0034560:CDS 55.0%
TCGTCCCTTTCTGCAAGTGG+TGG + chr1_1:62621848-62621867 Msa0034560:CDS 55.0%
AGACGAAGTTGCCACCACTG+GGG - chr1_1:62621960-62621979 None:intergenic 55.0%
GAAGACGAAGTTGCCACCAC+TGG - chr1_1:62621962-62621981 None:intergenic 55.0%
TGCCTGTTCCCAGTTTCCAG+TGG - chr1_1:62622061-62622080 None:intergenic 55.0%
ACTGGGAACAGGCAAGATGC+AGG + chr1_1:62622067-62622086 Msa0034560:CDS 55.0%
GGCAGTTCTTCTGCTGCAGT+TGG + chr1_1:62622118-62622137 Msa0034560:CDS 55.0%
!! AGTTCTTTCGGTGCTGCCAG+TGG + chr1_1:62622208-62622227 Msa0034560:CDS 55.0%
GCTGCCAGTGGTTCTCTGTT+TGG + chr1_1:62622220-62622239 Msa0034560:CDS 55.0%
TCCCAAGCTTCTCCTTCTGC+CGG + chr1_1:62622244-62622263 Msa0034560:CDS 55.0%
ACCGGCAGAAGGAGAAGCTT+GGG - chr1_1:62622248-62622267 None:intergenic 55.0%
TCCCCATTGTTTGGGTCGAC+TGG + chr1_1:62622316-62622335 Msa0034560:CDS 55.0%
CGGCACATCTGCTTCCTCTT+CGG + chr1_1:62622477-62622496 Msa0034560:CDS 55.0%
GACGTTCCAAACCCGGACAA+AGG - chr1_1:62622598-62622617 None:intergenic 55.0%
GGCAAACATGGGTGAACTGG+TGG - chr1_1:62622638-62622657 None:intergenic 55.0%
GGAGGCAAACATGGGTGAAC+TGG - chr1_1:62622641-62622660 None:intergenic 55.0%
CTGGTCGTGGAGGCAAACAT+GGG - chr1_1:62622649-62622668 None:intergenic 55.0%
ACTGGTCGTGGAGGCAAACA+TGG - chr1_1:62622650-62622669 None:intergenic 55.0%
AAACTGAGGAGCTGAGGCAC+TGG - chr1_1:62622668-62622687 None:intergenic 55.0%
AAAAGCAGGCTGTGTGGAGG+TGG - chr1_1:62622713-62622732 None:intergenic 55.0%
! ACCTCCACACAGCCTGCTTT+TGG + chr1_1:62622712-62622731 Msa0034560:CDS 55.0%
TCCAAAAGCAGGCTGTGTGG+AGG - chr1_1:62622716-62622735 None:intergenic 55.0%
GCTTCCAAAAGCAGGCTGTG+TGG - chr1_1:62622719-62622738 None:intergenic 55.0%
GGGTTAGGGCTTCCAAAAGC+AGG - chr1_1:62622727-62622746 None:intergenic 55.0%
CCAAACATAGGACTCGCAGG+CGG - chr1_1:62622835-62622854 None:intergenic 55.0%
GTTTGGTCAACAACCTGCCC+CGG + chr1_1:62622849-62622868 Msa0034560:CDS 55.0%
!! AGGACTGGTTCCTGAAGGAG+TGG - chr1_1:62622965-62622984 None:intergenic 55.0%
GGAGGAGGGAGTTTCTCGTT+AGG + chr1_1:62623069-62623088 Msa0034560:CDS 55.0%
GGGAGTTTCTCGTTAGGCTC+AGG + chr1_1:62623075-62623094 Msa0034560:CDS 55.0%
TTCTCGTTAGGCTCAGGTGG+TGG + chr1_1:62623081-62623100 Msa0034560:CDS 55.0%
TGAACGAACGGCGATGGCGA+CGG + chr1_1:62614150-62614169 Msa0034560:exon 60.0%
!! CCACCGGTTCCACCTTCGTA+TGG - chr1_1:62614193-62614212 None:intergenic 60.0%
CCATACGAAGGTGGAACCGG+TGG + chr1_1:62614190-62614209 Msa0034560:CDS 60.0%
AAGACGCTTGCGGAGGAGAG+AGG - chr1_1:62614374-62614393 None:intergenic 60.0%
GAATTAGGAGCAGGAGGGGG+AGG - chr1_1:62614400-62614419 None:intergenic 60.0%
CATTTGGGTGTCCTGGGGCA+AGG + chr1_1:62615652-62615671 Msa0034560:intron 60.0%
TACACTTGTGCCCTTGCCCC+AGG - chr1_1:62615666-62615685 None:intergenic 60.0%
GCTTGACCCAAGTGGCCCAA+CGG - chr1_1:62616730-62616749 None:intergenic 60.0%
GGCCACTTGGGTCAAGCTCT+AGG + chr1_1:62616733-62616752 Msa0034560:intron 60.0%
GCGTGCGATATCCTGCTCGT+AGG + chr1_1:62618804-62618823 Msa0034560:CDS 60.0%
GTGTGCCCAGTAGTAGCCCT+TGG - chr1_1:62618893-62618912 None:intergenic 60.0%
GCAGATCTGCCACGAGGTCT+TGG - chr1_1:62618944-62618963 None:intergenic 60.0%
GGCTCCAGCTCACCTCTTTC+TGG + chr1_1:62619375-62619394 Msa0034560:CDS 60.0%
GGAAGGGGGAAAGCTCGTAC+TGG - chr1_1:62619532-62619551 None:intergenic 60.0%
GGACCACCAGCCTCCTTTGA+AGG - chr1_1:62620735-62620754 None:intergenic 60.0%
TTCCTCTTCCTCCACCCCAG+TGG + chr1_1:62621943-62621962 Msa0034560:CDS 60.0%
CACCGGCAGAAGGAGAAGCT+TGG - chr1_1:62622249-62622268 None:intergenic 60.0%
CCGCCTGCGAGTCCTATGTT+TGG + chr1_1:62622832-62622851 Msa0034560:CDS 60.0%
GAACGGCGATGGCGACGGAA+GGG + chr1_1:62614155-62614174 Msa0034560:exon 65.0%
GACGCCGTACGATCGTCCTC+CGG + chr1_1:62614249-62614268 Msa0034560:CDS 65.0%
GCTGCCGGAGGACGATCGTA+CGG - chr1_1:62614256-62614275 None:intergenic 65.0%
! GGGTTTCTGAGTGCTGCCGG+AGG - chr1_1:62614268-62614287 None:intergenic 65.0%
GAGGAGGAAGACGCTTGCGG+AGG - chr1_1:62614381-62614400 None:intergenic 65.0%
GGGGAGGAGGAAGACGCTTG+CGG - chr1_1:62614384-62614403 None:intergenic 65.0%
TTAGGAGCAGGAGGGGGAGG+AGG - chr1_1:62614397-62614416 None:intergenic 65.0%
!! GGTGGCGGGCTTGCTGTTCA+TGG + chr1_1:62619103-62619122 Msa0034560:CDS 65.0%
CTCAGCCGGGAGGCTCAATC+AGG + chr1_1:62620868-62620887 Msa0034560:CDS 65.0%
CACCACTGGGGTGGAGGAAG+AGG - chr1_1:62621948-62621967 None:intergenic 65.0%
CTCTTCCTCCACCCCAGTGG+TGG + chr1_1:62621946-62621965 Msa0034560:CDS 65.0%
AGTTGCCACCACTGGGGTGG+AGG - chr1_1:62621954-62621973 None:intergenic 65.0%
CGAAGTTGCCACCACTGGGG+TGG - chr1_1:62621957-62621976 None:intergenic 65.0%
!! AGCTGAGGCACTGGTCGTGG+AGG - chr1_1:62622659-62622678 None:intergenic 65.0%
!! AGGAGCTGAGGCACTGGTCG+TGG - chr1_1:62622662-62622681 None:intergenic 65.0%
AGCAGGCTGTGTGGAGGTGG+AGG - chr1_1:62622710-62622729 None:intergenic 65.0%
CGAACGGCGATGGCGACGGA+AGG + chr1_1:62614154-62614173 Msa0034560:exon 70.0%
GGCGATGGCGACGGAAGGGA+AGG + chr1_1:62614159-62614178 Msa0034560:exon 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 62614098 62623158 62614098 ID=Msa0034560;Name=Msa0034560
chr1_1 mRNA 62614098 62623158 62614098 ID=Msa0034560-mRNA-1;Parent=Msa0034560;Name=Msa0034560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=65|0.87|0.77|1|1|1|9|0|1373
chr1_1 exon 62614098 62614424 62614098 ID=Msa0034560-mRNA-1:exon:19802;Parent=Msa0034560-mRNA-1
chr1_1 exon 62616185 62616276 62616185 ID=Msa0034560-mRNA-1:exon:19803;Parent=Msa0034560-mRNA-1
chr1_1 exon 62617350 62617480 62617350 ID=Msa0034560-mRNA-1:exon:19804;Parent=Msa0034560-mRNA-1
chr1_1 exon 62618106 62618304 62618106 ID=Msa0034560-mRNA-1:exon:19805;Parent=Msa0034560-mRNA-1
chr1_1 exon 62618716 62619021 62618716 ID=Msa0034560-mRNA-1:exon:19806;Parent=Msa0034560-mRNA-1
chr1_1 exon 62619103 62619189 62619103 ID=Msa0034560-mRNA-1:exon:19807;Parent=Msa0034560-mRNA-1
chr1_1 exon 62619279 62620007 62619279 ID=Msa0034560-mRNA-1:exon:19808;Parent=Msa0034560-mRNA-1
chr1_1 exon 62620246 62620889 62620246 ID=Msa0034560-mRNA-1:exon:19809;Parent=Msa0034560-mRNA-1
chr1_1 exon 62621487 62623158 62621487 ID=Msa0034560-mRNA-1:exon:19810;Parent=Msa0034560-mRNA-1
chr1_1 five_prime_UTR 62614098 62614162 62614098 ID=Msa0034560-mRNA-1:five_prime_utr;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62614163 62614424 62614163 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62616185 62616276 62616185 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62617350 62617480 62617350 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62618106 62618304 62618106 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62618716 62619021 62618716 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62619103 62619189 62619103 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62619279 62620007 62619279 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62620246 62620889 62620246 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
chr1_1 CDS 62621487 62623158 62621487 ID=Msa0034560-mRNA-1:cds;Parent=Msa0034560-mRNA-1
Gene Sequence

>Msa0034560

ATGGCGACGGAAGGGAAGGAGAAGAATCCATACGAAGGTGGAACCGGTGGCAAGTTCCGTAAACGTCCCTTCCGCAGAACTCAAACGACGCCGTACGATCGTCCTCCGGCAGCACTCAGAAACCCTAACAGCAACAACAACGGTTGGATTTCGAAGCTTGTTGATCCCGCTCACAGACTCATCACTCATGGCGCTCACTCTCTCTTCTCCTCTCTCCTCCGCAAGCGTCTTCCTCCTCCCCCTCCTGCTCCTAATTCTTCAGGGTTGGAACAAGAAATGAGACAGGACAATCATCAAGAAGAAGCTGTAGAGATGGAACAAGAAATGAGACAGGACAATCATCAAGAAGAAGCTGTTGCAAAAGAATCTTCTGGCAATCAACAAAGAGCAGTTGGTGAAAGTAATGTTCAAATTGATTGTTCTGACTCGGATCAAGGGGGATTGACTGAACTTGAGAAACTGTTGAAGCATAAGACTTTCACCAGGTCTGAGATTGATCATTTGACAGCACTTATGCAGTCAAGGACTGTAGATGCAGCTGTTAGGGGAGAAGAGAAGAGGTCAGAAATGGTTCTCTCAGAACCAATATTACCTTCTGGACAAAAGGAAGAATATCCCAAAACACCCACCGTAGAAAATGGGACTGAAAACCATCTTGCATTAACTCAACCTGTTACTTCCAGTGTTCCTATTGAGGATGTTGCTTCACCTGTAGAGCTTGCAAAAGCTTACATGGGGAGCAGGCAATCCAATGTATCCTCATCAATGCTAGGCGTGCGATATCCTGCTCGTAGGGAAGACACAACTCCTCTAAAAAGTGAAAAATCTCCGTATAAATCCCCTATTATGTCGATTGTGCCAAGGGCTACTACTGGGCACACTGCAATTCATGAAAACGGTTTTGTGACCCCAAGACCTCGTGGCAGATCTGCAATTTATAGTATGGCTCGTACACCGTATACCAGAATTTATCCAACCTCTACTCTCAAGGGTGGCGGGCTTGCTGTTCATGGCGAGCCTTCGTCTTCAACCCAGTCTGCAATGGATCATGCCATGTTTACCGGATCTACACAAGGGGGGATAAAGCGTAGAAATTTAGCAACGGATAATAATATAGGATCTGTTGGTCCTATCCGCCGAGTCCGTCAAAAGTCTAATCTTCTATATTCCAAAGGCTCCAGCTCACCTCTTTCTGGCAGTGCTCTATCTGTCTATAGGAACGGATTGGGTATTGAAGCTGCTCAGCAACCCTCATCTTCCTTTCATAAGCCTGTTCTGCTAGATAAAGTTAAGCACAAGTCCGAAGAAAACGTGAGTGGAACTAAGTCCAGTACGAGCTTTCCCCCTTCCTCCTCAAAATCCAGTGAGATGGCTACAAAAATTTTGCAGCAACTTGATAAAATAGCTTCTCCCAGAGAAAAATCATCTGAATCAAGGCTACCAGTTGTGAGTGATAGTTCATCAATGAAGTTATCACCTTCAATGCTACGTGGACAGGCTCTTCGAAGCTTGGAAATGGTAGATGCGTCAAAATTGCCGGACAGTTTACAAGGAAATAATTTGGATGGCACATTTGGAAATTTTACTTCCAGTGCTCAGAATCAGAAGTCAATTTCACATAGAGATAAGGGTGAAAACGGTCCATTGAAACTTGTTGCTTCTTCCAATGAATCGGTTCCTATTGTAACCACTACAGAGACCACAAAGTCAAGCAATCAAGTCTTGTCTAGTGAAAATTCTTTTATGATGAAATCGGTTTCTAACCCTACACAAAAGAAGCGAGCATTCCATATGAGTGCACACGAGTATGGCCCAACCTCAGATCATGATTGTTCTCTTTTCTTTTTGTCTCCTCTATTAAAGAATTCTCTGGACCTGGGTGATAATGCTTATAGAGCCGTCTCTTTTTCTTCTGCGGAAAAAGAATCAAAAAGCTCCATTGTTATTGCGGACAAAGTTTCTTCTGGTTCTGAAGCCATTGCACATGAAAGTCCCTCAACATCATCTGTGGTATTGCCATCCACAGGGTTTACGATAGATGCTCAAGCTCATGTTAAGACAACTGATGGTGGAGCTAATGTTAAGACATCTGTGGCTACAGTTGCAGTTACAGCACCTACAATAACAACTTTTGGTTCTGACAAGCCTGCATTACCAAATGGGTCAACTGCTAATCCTTCTTTGTTTAATTTTTCTAGTAAGAATATCTCGTCAGCAGAGTTATCAACTTCTGTTGCTTCATCAAAGGAGTTAGCCAAATCAGCTCCAGTATTTGGTTTGGAGAAGGTTGATCCTTCAAAGGAGGCTGGTGGTCCATCAGTAAACTTTGACACCAAGCAAAATGTTTTCAAGGTTCCACCAATCCCATTTACTGCTTCATCATCAGTTGGTGGTGAGTCTACTCCGAAATTTGGTGCTTCTTTTGACTCTCAGCCGGGAGGCTCAATCAGCTTTACTACTGTTGCTGGTTCAACTGGTTCTATGCAAAAAGTTTGTGAATCTGATAGTGGTGATGCTGGGACTGATAAAAATACCGGATTTTCTGTTAGGGCGTCGGAACTAGCTGTTTCATCTGCAGCATCAACATCATTGTTGACACCATCAAATAGTATATTCAAATTTGGCCATAGTTCAAATCAAAATAATGGGTCTCTTGGTTCAGGCCCTTCATTTTCTTCTTCCTTTCCATCTCTCATATCAAATAACTTTAGCAACAGTTCAAATCAAAATAATGGGTCCCTTGCTTCAGGCCCTTCATTCTCTTCTTCCGTTCCATCTCTTCTTGTATCAAATAACTTTAGCAACAGTAGCTCGTCCCTTTCTGCAAGTGGTGGCATTAATGCCACTTCTGCTTCCACTGGAATTATCATGTCAACTCCTGTGCTTGCTGCATCAAATAATAACTGTTCCTCTTCCTCCACCCCAGTGGTGGCAACTTCGTCTTCAACAACTTCCCTTTTCAAATTCGGTTCCTTTCCTGTCACATCAGCAGGTTTATCTGTATCATCTTCTGGCTCAAAACCACTGGAAACTGGGAACAGGCAAGATGCAGGAATCGGTAGTTTTAGCAGCACTGCATTTGGCAGTTCTTCTGCTGCAGTTGGAAGCACAGCGAGTGCCATTTTTGGGTTCAGCTCTTCATCAATGACAGCTGGAGCTAGCCAGTCTCAGAGTTCTTTCGGTGCTGCCAGTGGTTCTCTGTTTGGTTCCCAAGCTTCTCCTTCTGCCGGTGTATTTACAACTTCTACTCAGACCCAGTCAGTTCAATCATCTGCATCATCCCCATTGTTTGGGTCGACTGGTAAGACAGATATTTCTTCTGGGAGTTCTTTGTTTCCTTCTTTAAGTTCTGCCACAAATACATCTTTTTCTTCTGGGAGTTCAATGTTTCCTTCAAGTTCTGCCACTAACGTTTTCAATTCCGGTACAACATTTGGACTCGGCACATCTGCTTCCTCTTCGGCAGTCAACTCTAGTAGTGGCACAGGCTCTAGTTTATTTGGGGCTTCTAGTTGTCAACCCAGCAATTCTCTATTTGGTTCCTCATTTAGTTCATCACCTTTGTCCGGGTTTGGAACGTCCAGTACTACTGTTGCTTCCACCAGTTCACCCATGTTTGCCTCCACGACCAGTGCCTCAGCTCCTCAGTTTTCATTCACTTCAGCTGTAGCCTCCACCTCCACACAGCCTGCTTTTGGAAGCCCTAACCCTGTCTTTGCGTTTGGTTCAGCTCCAGTTAATAATGATCAGATGAGTATGGTGGACAGTATGGCTGAGGACAGTGTTCAAGCGACTCCGCCTGCGAGTCCTATGTTTGGTCAACAACCTGCCCCGGTTCAATCAAATTTTGTATTTGGAGCATCCACTCATTCAGGAACCAGTCCTTTCCAGTTTGCAAGTCAACAGAACATTGCTTCACAGGTTTCCACTCCTTCAGGAACCAGTCCTTTCCAGTTTGCTAGTCAACAGAACATTCCTCCACAGAACCCTTCTCCATTTCAGGCTTCTGGCAGTCTGGAATTTAATGCAGGAGGAGGAGGGAGTTTCTCGTTAGGCTCAGGTGGTGGTGATAAGTCTGGTCGAAAAATTATTAAAGTCAAACATAGAAACCGTAAGAAGTAA
Protein sequence

>Msa0034560

MATEGKEKNPYEGGTGGKFRKRPFRRTQTTPYDRPPAALRNPNSNNNGWISKLVDPAHRLITHGAHSLFSSLLRKRLPPPPPAPNSSGLEQEMRQDNHQEEAVEMEQEMRQDNHQEEAVAKESSGNQQRAVGESNVQIDCSDSDQGGLTELEKLLKHKTFTRSEIDHLTALMQSRTVDAAVRGEEKRSEMVLSEPILPSGQKEEYPKTPTVENGTENHLALTQPVTSSVPIEDVASPVELAKAYMGSRQSNVSSSMLGVRYPARREDTTPLKSEKSPYKSPIMSIVPRATTGHTAIHENGFVTPRPRGRSAIYSMARTPYTRIYPTSTLKGGGLAVHGEPSSSTQSAMDHAMFTGSTQGGIKRRNLATDNNIGSVGPIRRVRQKSNLLYSKGSSSPLSGSALSVYRNGLGIEAAQQPSSSFHKPVLLDKVKHKSEENVSGTKSSTSFPPSSSKSSEMATKILQQLDKIASPREKSSESRLPVVSDSSSMKLSPSMLRGQALRSLEMVDASKLPDSLQGNNLDGTFGNFTSSAQNQKSISHRDKGENGPLKLVASSNESVPIVTTTETTKSSNQVLSSENSFMMKSVSNPTQKKRAFHMSAHEYGPTSDHDCSLFFLSPLLKNSLDLGDNAYRAVSFSSAEKESKSSIVIADKVSSGSEAIAHESPSTSSVVLPSTGFTIDAQAHVKTTDGGANVKTSVATVAVTAPTITTFGSDKPALPNGSTANPSLFNFSSKNISSAELSTSVASSKELAKSAPVFGLEKVDPSKEAGGPSVNFDTKQNVFKVPPIPFTASSSVGGESTPKFGASFDSQPGGSISFTTVAGSTGSMQKVCESDSGDAGTDKNTGFSVRASELAVSSAASTSLLTPSNSIFKFGHSSNQNNGSLGSGPSFSSSFPSLISNNFSNSSNQNNGSLASGPSFSSSVPSLLVSNNFSNSSSSLSASGGINATSASTGIIMSTPVLAASNNNCSSSSTPVVATSSSTTSLFKFGSFPVTSAGLSVSSSGSKPLETGNRQDAGIGSFSSTAFGSSSAAVGSTASAIFGFSSSSMTAGASQSQSSFGAASGSLFGSQASPSAGVFTTSTQTQSVQSSASSPLFGSTGKTDISSGSSLFPSLSSATNTSFSSGSSMFPSSSATNVFNSGTTFGLGTSASSSAVNSSSGTGSSLFGASSCQPSNSLFGSSFSSSPLSGFGTSSTTVASTSSPMFASTTSASAPQFSFTSAVASTSTQPAFGSPNPVFAFGSAPVNNDQMSMVDSMAEDSVQATPPASPMFGQQPAPVQSNFVFGASTHSGTSPFQFASQQNIASQVSTPSGTSPFQFASQQNIPPQNPSPFQASGSLEFNAGGGGSFSLGSGGGDKSGRKIIKVKHRNRKK*