Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659290 | XP_003630250.1 | 93.967 | 779 | 47 | 0 | 1 | 779 | 1 | 779 | 0.0 | 1508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659290 | sp|Q9LIH5|C3H38_ARATH | 30.798 | 539 | 278 | 17 | 258 | 779 | 216 | 676 | 6.98e-44 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659290 | G7LE04 | 93.967 | 779 | 47 | 0 | 1 | 779 | 1 | 779 | 0.0 | 1508 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0659290 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0659290 | Msa0705470 | 0.836728 | 7.894977e-57 | -8.615850e-47 |
| Msa0659290 | Msa0769390 | 0.836206 | 1.071813e-56 | -8.615850e-47 |
| Msa0659290 | Msa0789690 | 0.826389 | 2.786712e-54 | -8.615850e-47 |
| Msa0659290 | Msa1083570 | 0.841368 | 4.958867e-58 | -8.615850e-47 |
| Msa0659290 | Msa1128560 | 0.820696 | 5.983943e-53 | -8.615850e-47 |
| Msa0659290 | Msa1411760 | 0.836815 | 7.502155e-57 | -8.615850e-47 |
| Msa0659290 | Msa1414430 | 0.807194 | 5.695191e-50 | -8.615850e-47 |
| Msa0387530 | Msa0659290 | 0.808311 | 3.296947e-50 | -8.615850e-47 |
| Msa0511000 | Msa0659290 | 0.808200 | 3.481239e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659290 | MtrunA17_Chr8g0384131 | 93.967 | 779 | 47 | 0 | 1 | 779 | 1 | 779 | 0.0 | 1508 |
| Msa0659290 | MtrunA17_Chr3g0129941 | 48.348 | 666 | 258 | 16 | 172 | 779 | 333 | 970 | 1.25e-175 | 530 |
| Msa0659290 | MtrunA17_Chr3g0129941 | 53.543 | 254 | 90 | 6 | 1 | 236 | 1 | 244 | 5.70e-57 | 210 |
| Msa0659290 | MtrunA17_Chr2g0308451 | 32.524 | 206 | 106 | 5 | 599 | 779 | 1251 | 1448 | 2.02e-19 | 94.0 |
| Msa0659290 | MtrunA17_Chr2g0282581 | 40.964 | 83 | 49 | 0 | 693 | 775 | 805 | 887 | 9.36e-15 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659290 | AT3G18640.3 | 30.798 | 539 | 278 | 17 | 258 | 779 | 216 | 676 | 7.09e-45 | 172 |
| Msa0659290 | AT3G18640.1 | 30.798 | 539 | 278 | 17 | 258 | 779 | 216 | 676 | 7.09e-45 | 172 |
| Msa0659290 | AT3G18640.2 | 30.798 | 539 | 278 | 17 | 258 | 779 | 216 | 676 | 7.09e-45 | 172 |
| Msa0659290 | AT2G10553.1 | 62.500 | 80 | 30 | 0 | 699 | 778 | 2 | 81 | 1.61e-28 | 109 |
| Msa0659290 | AT3G26850.2 | 34.641 | 153 | 93 | 2 | 631 | 779 | 116 | 265 | 1.71e-21 | 95.5 |
| Msa0659290 | AT3G26850.1 | 34.641 | 153 | 93 | 2 | 631 | 779 | 116 | 265 | 1.71e-21 | 95.5 |
| Msa0659290 | AT2G33835.1 | 39.394 | 99 | 57 | 2 | 681 | 778 | 490 | 586 | 1.57e-15 | 80.9 |
Find 226 sgRNAs with CRISPR-Local
Find 589 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCAGTAGTTCAAGGTATT+TGG | 0.172150 | 4_3:-69628552 | Msa0659290:CDS |
| CCTCATCAGGTCCATCATTT+TGG | 0.185844 | 4_3:+69625647 | None:intergenic |
| GCAACTGAATCGCTCAATTT+TGG | 0.198692 | 4_3:+69626920 | None:intergenic |
| CATTTACCAGCCCTAGATTA+AGG | 0.209423 | 4_3:-69626991 | Msa0659290:CDS |
| CTCATGGGGATTAGAATATC+TGG | 0.229022 | 4_3:+69627315 | None:intergenic |
| TGTCTCCGGCACAGAAAATT+TGG | 0.243797 | 4_3:-69626798 | Msa0659290:CDS |
| TCCTTCTTATCAATTGAAAA+TGG | 0.244006 | 4_3:+69626662 | None:intergenic |
| TGATAGATGGTTTAGGATAT+TGG | 0.261028 | 4_3:+69632377 | None:intergenic |
| TTACTCTCGGGTGGAAATTC+AGG | 0.278145 | 4_3:+69628817 | None:intergenic |
| TTCATTGGTAGAGCTTATTA+AGG | 0.278348 | 4_3:-69625581 | Msa0659290:CDS |
| GAACCTCTGACTCCCGAAAA+AGG | 0.282854 | 4_3:+69628482 | None:intergenic |
| TTGCGTGAAAACCTCATTCT+TGG | 0.284032 | 4_3:+69628509 | None:intergenic |
| CAAGCCATGAATCCAGGTTC+TGG | 0.293698 | 4_3:+69626743 | None:intergenic |
| AGCGATTCAGTTGCTCCTTA+TGG | 0.297936 | 4_3:-69626911 | Msa0659290:CDS |
| CCCATGAATATTAGTGCAAA+TGG | 0.330779 | 4_3:-69625865 | Msa0659290:CDS |
| ATCAAGCCAGATCCTGCTAT+TGG | 0.331025 | 4_3:-69625925 | Msa0659290:CDS |
| CCCATTTGCACTAATATTCA+TGG | 0.335498 | 4_3:+69625864 | None:intergenic |
| ATGTCTCCTGATTGGAATTA+TGG | 0.341445 | 4_3:-69626551 | Msa0659290:CDS |
| TGACGAAGACTACCAAGTTT+TGG | 0.349640 | 4_3:-69628450 | Msa0659290:CDS |
| TGATGGGTTTGATAAAATTT+CGG | 0.356095 | 4_3:-69627182 | Msa0659290:CDS |
| AATAACAGTTGCCTAATGTT+TGG | 0.356794 | 4_3:+69623891 | None:intergenic |
| TGATCCAATGTTTGACAGTA+TGG | 0.360762 | 4_3:-69625890 | Msa0659290:CDS |
| GCAGAAAGCTATCTTCAAAC+TGG | 0.366135 | 4_3:-69628855 | Msa0659290:CDS |
| AGCCTATCACAAATCGGTTC+TGG | 0.370700 | 4_3:-69626144 | Msa0659290:CDS |
| GAATATAACTGCTTCCCATT+TGG | 0.376514 | 4_3:-69626289 | Msa0659290:CDS |
| GTTATTCAGCTGTCGATGAT+AGG | 0.378174 | 4_3:-69627483 | Msa0659290:CDS |
| CGCCCCAGAACCTGGATTCA+TGG | 0.383806 | 4_3:-69626747 | Msa0659290:CDS |
| TGTATAAGTTTGTTAACCTT+TGG | 0.384179 | 4_3:+69625403 | None:intergenic |
| GGGAGTCAGAGGTTCAAATA+AGG | 0.384299 | 4_3:-69628474 | Msa0659290:CDS |
| GACCTATCATCCCTTAATCT+AGG | 0.385299 | 4_3:+69626980 | None:intergenic |
| CCTCATAACTTTGCTTATCA+TGG | 0.387218 | 4_3:+69627371 | None:intergenic |
| CTTGACTTTGTCCAACCAAA+TGG | 0.387671 | 4_3:+69626274 | None:intergenic |
| CTGCGGTGGAGTGCGGGATG+CGG | 0.393128 | 4_3:+69632472 | None:intergenic |
| CCTTCAATAATTCTTGCTCC+TGG | 0.398199 | 4_3:+69626231 | None:intergenic |
| TTGATGAATGTCATAGAAAC+AGG | 0.398984 | 4_3:+69625943 | None:intergenic |
| AAGGTTACTGATAAAGTAAC+TGG | 0.399020 | 4_3:-69625493 | Msa0659290:CDS |
| ATTTACCAGCCCTAGATTAA+GGG | 0.399284 | 4_3:-69626990 | Msa0659290:CDS |
| GGTTTGAGGAATGGAACAAT+AGG | 0.403730 | 4_3:-69628373 | Msa0659290:CDS |
| GTCGGAATGGTAAAGATTGT+AGG | 0.407509 | 4_3:-69627033 | Msa0659290:CDS |
| CAAAGTGAAGCTTAAGGCTC+TGG | 0.409471 | 4_3:-69628899 | Msa0659290:five_prime_UTR |
| TGCGGTGGAGTGCGGGATGC+GGG | 0.418083 | 4_3:+69632473 | None:intergenic |
| AAGACGATGATAGATGGTTT+AGG | 0.418189 | 4_3:+69632370 | None:intergenic |
| TTTCGGCAGATGAATCATCT+AGG | 0.418420 | 4_3:-69627165 | Msa0659290:CDS |
| TTAGAATATCTGGGTCCATC+TGG | 0.423271 | 4_3:+69627325 | None:intergenic |
| TGCAAAGGGAAGGTGTAGAA+TGG | 0.424935 | 4_3:-69627239 | Msa0659290:CDS |
| GAGAGTAGCCTTTGCATCAC+AGG | 0.432367 | 4_3:+69625996 | None:intergenic |
| TTATAAAACAATTGTGAAGA+AGG | 0.434641 | 4_3:-69625512 | Msa0659290:CDS |
| AAGCCATGAATCCAGGTTCT+GGG | 0.436724 | 4_3:+69626744 | None:intergenic |
| AATCTTTATACTAGGAGAAA+AGG | 0.440601 | 4_3:+69625831 | None:intergenic |
| CCATGAATATTAGTGCAAAT+GGG | 0.440948 | 4_3:-69625864 | Msa0659290:CDS |
| AGCAAAGTTATGAGGATAGC+AGG | 0.443006 | 4_3:-69627363 | Msa0659290:CDS |
| TTGCTGACTCCGTTCTGAGT+TGG | 0.443876 | 4_3:+69626114 | None:intergenic |
| CAATTGTTGCATCCAAAACT+TGG | 0.444892 | 4_3:+69628438 | None:intergenic |
| CAGAACCTGGATTCATGGCT+TGG | 0.445159 | 4_3:-69626742 | Msa0659290:CDS |
| TACAGAAGAGAATAGTCCTA+TGG | 0.445294 | 4_3:-69625680 | Msa0659290:CDS |
| TTCCCTCAATTGCATCAAAC+AGG | 0.445579 | 4_3:+69623859 | None:intergenic |
| TGTGCAGGCGTATGTGGAAA+AGG | 0.452314 | 4_3:-69624190 | Msa0659290:intron |
| ATCATAGGCGCCCCAGAACC+TGG | 0.452733 | 4_3:-69626755 | Msa0659290:CDS |
| TTCAATCCAATAGCAGGATC+TGG | 0.454738 | 4_3:+69625919 | None:intergenic |
| TAGTTTACAAACCAAACATT+AGG | 0.456296 | 4_3:-69623902 | Msa0659290:three_prime_UTR |
| TGGCCAATGAACGATGGATC+GGG | 0.459051 | 4_3:-69626722 | Msa0659290:CDS |
| TACAATATGAAAGTGTCTCC+AGG | 0.459715 | 4_3:-69628395 | Msa0659290:CDS |
| AGAATGGCCGATGTAGATAA+AGG | 0.460539 | 4_3:-69626854 | Msa0659290:CDS |
| ATGCTCATCTTTAATATGAC+TGG | 0.462728 | 4_3:+69626517 | None:intergenic |
| AAAGGTTAACAAACTTATAC+AGG | 0.465005 | 4_3:-69625401 | Msa0659290:intron |
| GATGCAAAGGCTACTCTCTT+CGG | 0.465991 | 4_3:-69625991 | Msa0659290:CDS |
| GGGAAAGGGAAATTGATAGA+AGG | 0.468456 | 4_3:-69627144 | Msa0659290:CDS |
| TGTCCTAGGTTAGATAATAG+TGG | 0.470060 | 4_3:+69625784 | None:intergenic |
| TTCTATGCACGGAAAGAGCT+AGG | 0.470588 | 4_3:-69632349 | Msa0659290:five_prime_UTR |
| ACATGCCTCCACCTACTGAC+TGG | 0.474548 | 4_3:+69626591 | None:intergenic |
| TTCTGTTCCTGTCTAAGCTA+TGG | 0.475586 | 4_3:+69626699 | None:intergenic |
| TCAAAGCTGCGGTGGAGTGC+GGG | 0.478145 | 4_3:+69632466 | None:intergenic |
| GCAAAGGGAAGGTGTAGAAT+GGG | 0.479280 | 4_3:-69627238 | Msa0659290:CDS |
| CTCGCACCATAATTCCAATC+AGG | 0.479580 | 4_3:+69626545 | None:intergenic |
| GCATAGAAGACGATGATAGA+TGG | 0.480249 | 4_3:+69632364 | None:intergenic |
| TCGTGCATTTAAGTCTTCAT+TGG | 0.482301 | 4_3:-69625596 | Msa0659290:CDS |
| ATAACTGCTTCCCATTTGGT+TGG | 0.482978 | 4_3:-69626285 | Msa0659290:CDS |
| CTTCAATAATTCTTGCTCCT+GGG | 0.486119 | 4_3:+69626232 | None:intergenic |
| GAGAATAATCCCCACTCTCA+TGG | 0.492546 | 4_3:+69627299 | None:intergenic |
| CTCTTCGGAAGCAAAATTGA+AGG | 0.493466 | 4_3:-69625976 | Msa0659290:CDS |
| GGAGTGTTACTGATGTGGTT+TGG | 0.493594 | 4_3:+69627082 | None:intergenic |
| ACTGATTTAGTTGCTGTCTC+CGG | 0.494397 | 4_3:-69626812 | Msa0659290:CDS |
| ATTGGCCAAGCCATGAATCC+AGG | 0.494986 | 4_3:+69626737 | None:intergenic |
| TAAAACCATGTGGAGGGCTC+CGG | 0.496685 | 4_3:+69627506 | None:intergenic |
| GTCCAGAACCGATTTGTGAT+AGG | 0.498070 | 4_3:+69626142 | None:intergenic |
| TACTGTTTCAATCCAATAGC+AGG | 0.498333 | 4_3:+69625913 | None:intergenic |
| GAGTAATCAAGGTGAAGATC+AGG | 0.501418 | 4_3:-69626954 | Msa0659290:CDS |
| GCTTGCATTTATTATGCAAA+GGG | 0.501531 | 4_3:-69627253 | Msa0659290:CDS |
| TGTCTCCAGGGTTTGAGGAA+TGG | 0.501913 | 4_3:-69628382 | Msa0659290:CDS |
| TTGTTCCATTCCTCAAACCC+TGG | 0.503911 | 4_3:+69628377 | None:intergenic |
| GGCCGATGTAGATAAAGGTT+GGG | 0.504833 | 4_3:-69626849 | Msa0659290:CDS |
| TGGCCCGATCCATCGTTCAT+TGG | 0.506131 | 4_3:+69626719 | None:intergenic |
| AGAATAATCCCCACTCTCAT+GGG | 0.507875 | 4_3:+69627300 | None:intergenic |
| ATGAACAGATGTCTCCTGAT+TGG | 0.507885 | 4_3:-69626559 | Msa0659290:CDS |
| TTAGGATATTGGAGAGTGAG+AGG | 0.508453 | 4_3:+69632388 | None:intergenic |
| ATTAACCAAAGTGAAGCTTA+AGG | 0.508624 | 4_3:-69628905 | Msa0659290:five_prime_UTR |
| TTCAATAATTCTTGCTCCTG+GGG | 0.510891 | 4_3:+69626233 | None:intergenic |
| CCATGATAAGCAAAGTTATG+AGG | 0.511629 | 4_3:-69627371 | Msa0659290:CDS |
| CAGAGCCTTAAGCTTCACTT+TGG | 0.512307 | 4_3:+69628900 | None:intergenic |
| GTAGGTGGAGGCATGTGGCC+TGG | 0.514213 | 4_3:-69626584 | Msa0659290:CDS |
| TTTATACTAGGAGAAAAGGT+TGG | 0.514656 | 4_3:+69625835 | None:intergenic |
| GAAAGTGTCTCCAGGGTTTG+AGG | 0.515239 | 4_3:-69628387 | Msa0659290:CDS |
| AGTAAGCAGCAAGTTGCTCC+AGG | 0.516368 | 4_3:-69626488 | Msa0659290:intron |
| CTCGCACATATCCTCGGAAC+TGG | 0.519764 | 4_3:-69626054 | Msa0659290:CDS |
| CTGAAACCAACATGGAAAGA+TGG | 0.520966 | 4_3:-69625553 | Msa0659290:CDS |
| TTGACTTTGTCCAACCAAAT+GGG | 0.521411 | 4_3:+69626275 | None:intergenic |
| TGTTGTATAAATATAAACTC+AGG | 0.521664 | 4_3:-69623987 | Msa0659290:three_prime_UTR |
| TGGCCGATGTAGATAAAGGT+TGG | 0.522321 | 4_3:-69626850 | Msa0659290:CDS |
| TTGCCAGGTCTAGGAGAAGT+AGG | 0.522537 | 4_3:-69627531 | Msa0659290:intron |
| AAAGTGAAGCTTAAGGCTCT+GGG | 0.522588 | 4_3:-69628898 | Msa0659290:five_prime_UTR |
| ACCTATCATCCCTTAATCTA+GGG | 0.523142 | 4_3:+69626981 | None:intergenic |
| TTAGAGTAGAATGAACTTGT+GGG | 0.523416 | 4_3:+69626022 | None:intergenic |
| TTGGCCAATGAACGATGGAT+CGG | 0.523666 | 4_3:-69626723 | Msa0659290:CDS |
| TTACCTGTTTGATGCAATTG+AGG | 0.523769 | 4_3:-69623862 | Msa0659290:three_prime_UTR |
| AAAGAAAACAAAGGACGCGA+AGG | 0.524373 | 4_3:-69625623 | Msa0659290:CDS |
| CATAGAGCAATCATTCAAGC+AGG | 0.525287 | 4_3:-69627119 | Msa0659290:CDS |
| ATCATCCCTTAATCTAGGGC+TGG | 0.527217 | 4_3:+69626985 | None:intergenic |
| GAGAGGGTAGTAAGTAGCAC+TGG | 0.527540 | 4_3:+69632405 | None:intergenic |
| ATCAAAGCTGCGGTGGAGTG+CGG | 0.530423 | 4_3:+69632465 | None:intergenic |
| AGCTTTGATTGATGACAAAA+CGG | 0.531081 | 4_3:-69632451 | Msa0659290:five_prime_UTR |
| TTACTAAAAGCAGTAGTTCA+AGG | 0.532963 | 4_3:-69628559 | Msa0659290:CDS |
| ACAGAAGAGAATAGTCCTAT+GGG | 0.535719 | 4_3:-69625679 | Msa0659290:CDS |
| AATGCAAGCCTATCACAAAT+CGG | 0.539727 | 4_3:-69626150 | Msa0659290:CDS |
| GCCCTAGATTAAGGGATGAT+AGG | 0.542024 | 4_3:-69626982 | Msa0659290:CDS |
| GTTTGAGGAATGGAACAATA+GGG | 0.542357 | 4_3:-69628372 | Msa0659290:CDS |
| AGATGAATCATCTAGGGAAA+GGG | 0.544094 | 4_3:-69627158 | Msa0659290:CDS |
| TAGGATATTGGAGAGTGAGA+GGG | 0.544342 | 4_3:+69632389 | None:intergenic |
| ATTCTAATCCCCATGAGAGT+GGG | 0.544443 | 4_3:-69627309 | Msa0659290:CDS |
| CATGCCTCCACCTACTGACT+GGG | 0.545247 | 4_3:+69626592 | None:intergenic |
| GGAGACATGGACCAAAATGA+TGG | 0.546029 | 4_3:-69625658 | Msa0659290:CDS |
| AGCTTGCATTTATTATGCAA+AGG | 0.547591 | 4_3:-69627254 | Msa0659290:CDS |
| TTTAGAGTAGAATGAACTTG+TGG | 0.547988 | 4_3:+69626021 | None:intergenic |
| CTCATTTCCCAGTCAGTAGG+TGG | 0.549087 | 4_3:-69626599 | Msa0659290:CDS |
| AAGAAAACAAAGGACGCGAA+GGG | 0.550204 | 4_3:-69625622 | Msa0659290:CDS |
| ATACTAGGAGAAAAGGTTGG+AGG | 0.551278 | 4_3:+69625838 | None:intergenic |
| GCCTCTCTCGCACATATCCT+CGG | 0.552753 | 4_3:-69626060 | Msa0659290:CDS |
| CCAGGAGCAAGAATTATTGA+AGG | 0.556088 | 4_3:-69626231 | Msa0659290:CDS |
| CCATTTGCACTAATATTCAT+GGG | 0.556712 | 4_3:+69625865 | None:intergenic |
| AGTCAGTAGGTGGAGGCATG+TGG | 0.556809 | 4_3:-69626589 | Msa0659290:CDS |
| GCAACTAAATCAGTCTGCAT+TGG | 0.556935 | 4_3:+69626821 | None:intergenic |
| GATGATAGATGTGGTTCAGA+TGG | 0.559177 | 4_3:-69626878 | Msa0659290:CDS |
| CAGATGAATCATCTAGGGAA+AGG | 0.559379 | 4_3:-69627159 | Msa0659290:CDS |
| TTCGGCAGATGAATCATCTA+GGG | 0.560292 | 4_3:-69627164 | Msa0659290:CDS |
| TTTATCAGTTTCGAAACCAA+AGG | 0.562819 | 4_3:-69625419 | Msa0659290:CDS |
| GATCGGGCCATAGCTTAGAC+AGG | 0.565642 | 4_3:-69626706 | Msa0659290:CDS |
| CTATCATCGTCTTCTATGCA+CGG | 0.565982 | 4_3:-69632360 | Msa0659290:five_prime_UTR |
| GAAAGTAAACACAGGCCAGA+TGG | 0.570539 | 4_3:-69627340 | Msa0659290:CDS |
| TCATCTCTTAGCCTTCCATA+AGG | 0.570542 | 4_3:+69626896 | None:intergenic |
| CGGCACAGAAAATTTGGTTG+AGG | 0.571622 | 4_3:-69626792 | Msa0659290:CDS |
| GGTCTAGGAGAAGTAGGAGC+CGG | 0.573061 | 4_3:-69627525 | Msa0659290:CDS |
| GCATTTATTATGCAAAGGGA+AGG | 0.573665 | 4_3:-69627249 | Msa0659290:CDS |
| CAGAAAGCTATCTTCAAACT+GGG | 0.573681 | 4_3:-69628854 | Msa0659290:CDS |
| TCATGGGGATTAGAATATCT+GGG | 0.574011 | 4_3:+69627316 | None:intergenic |
| TCAAGGTGAAGATCAGGTGT+TGG | 0.575506 | 4_3:-69626948 | Msa0659290:CDS |
| GTGCATCATGACAATTCTGA+TGG | 0.575886 | 4_3:-69627199 | Msa0659290:CDS |
| AGTAACTGGTACAGTACAGC+GGG | 0.578110 | 4_3:-69625479 | Msa0659290:CDS |
| GCTGTTGGGAACTGCAGAAG+AGG | 0.580264 | 4_3:-69627415 | Msa0659290:CDS |
| GTAGAACATCGGAATGGAGA+AGG | 0.580523 | 4_3:+69632323 | None:intergenic |
| CCAACAGCAAAATCTCTACA+AGG | 0.582187 | 4_3:+69627430 | None:intergenic |
| TACTAGGAGAAAAGGTTGGA+GGG | 0.584072 | 4_3:+69625839 | None:intergenic |
| TACCTGTTTGATGCAATTGA+GGG | 0.584950 | 4_3:-69623861 | Msa0659290:three_prime_UTR |
| GGCTCCATACTGTCAAACAT+TGG | 0.585746 | 4_3:+69625886 | None:intergenic |
| GATAGGAACAGAACGAGGGA+TGG | 0.586418 | 4_3:-69627466 | Msa0659290:CDS |
| GATAGGTCGAGGAGTAATCA+AGG | 0.586872 | 4_3:-69626965 | Msa0659290:CDS |
| ATTCTCATTTCCCAGTCAGT+AGG | 0.589106 | 4_3:-69626602 | Msa0659290:CDS |
| ATTCAGTTGCTCCTTATGGA+AGG | 0.590004 | 4_3:-69626907 | Msa0659290:CDS |
| ATCCCAACCTTTATCTACAT+CGG | 0.591462 | 4_3:+69626847 | None:intergenic |
| ATGTGGTTCAGATGGCAGAA+TGG | 0.591695 | 4_3:-69626870 | Msa0659290:CDS |
| TATTCTAATCCCCATGAGAG+TGG | 0.592838 | 4_3:-69627310 | Msa0659290:CDS |
| TCCGAGGATATGTGCGAGAG+AGG | 0.592954 | 4_3:+69626059 | None:intergenic |
| GCAAAGTTATGAGGATAGCA+GGG | 0.598476 | 4_3:-69627362 | Msa0659290:CDS |
| ATACGCTAAAACCAAGAATG+AGG | 0.598870 | 4_3:-69628520 | Msa0659290:CDS |
| GGAGACATCTGTTCATCACC+AGG | 0.599211 | 4_3:+69626566 | None:intergenic |
| TCTATGCACGGAAAGAGCTA+GGG | 0.599996 | 4_3:-69632348 | Msa0659290:five_prime_UTR |
| AGAGTAGCCTTTGCATCACA+GGG | 0.602543 | 4_3:+69625997 | None:intergenic |
| ACAATTGCAAAAGACACTGA+TGG | 0.604078 | 4_3:-69628422 | Msa0659290:CDS |
| TCTAAAGCCCTGTGATGCAA+AGG | 0.604733 | 4_3:-69626004 | Msa0659290:CDS |
| ATTTCCCAGTCAGTAGGTGG+AGG | 0.605746 | 4_3:-69626596 | Msa0659290:CDS |
| GTTGTATAAATATAAACTCA+GGG | 0.607394 | 4_3:-69623986 | Msa0659290:three_prime_UTR |
| TCTTCGGAAGCAAAATTGAA+GGG | 0.610203 | 4_3:-69625975 | Msa0659290:CDS |
| GATTAAGGGATGATAGGTCG+AGG | 0.611243 | 4_3:-69626976 | Msa0659290:CDS |
| CAAGCATAAATAAATACGCA+AGG | 0.612663 | 4_3:+69624084 | None:intergenic |
| GAATAGTCCTATGGGAGACA+TGG | 0.612755 | 4_3:-69625671 | Msa0659290:CDS |
| TGCAAGGAGTGTTACTGATG+TGG | 0.613717 | 4_3:+69627077 | None:intergenic |
| ACAATATGAAAGTGTCTCCA+GGG | 0.615729 | 4_3:-69628394 | Msa0659290:CDS |
| CATGAATATTAGTGCAAATG+GGG | 0.616718 | 4_3:-69625863 | Msa0659290:CDS |
| GTATGTGGAAAAGGTTCAGA+AGG | 0.617543 | 4_3:-69624181 | Msa0659290:CDS |
| AAACAGGCCTTACTCTCGGG+TGG | 0.618405 | 4_3:+69628808 | None:intergenic |
| AGCCATGAATCCAGGTTCTG+GGG | 0.621203 | 4_3:+69626745 | None:intergenic |
| TTCTAATCCCCATGAGAGTG+GGG | 0.622227 | 4_3:-69627308 | Msa0659290:CDS |
| GAATAACTAAAACCATGTGG+AGG | 0.622897 | 4_3:+69627499 | None:intergenic |
| TCGATGATAGGAACAGAACG+AGG | 0.623889 | 4_3:-69627471 | Msa0659290:CDS |
| TCAATAATTCTTGCTCCTGG+GGG | 0.624254 | 4_3:+69626234 | None:intergenic |
| AGGAGATTCTGAAACCAACA+TGG | 0.625902 | 4_3:-69625561 | Msa0659290:CDS |
| TGCAAATTATACATCATCTG+AGG | 0.627662 | 4_3:+69624023 | None:intergenic |
| GATGTAGATAAAGGTTGGGA+TGG | 0.633114 | 4_3:-69626845 | Msa0659290:CDS |
| GGACATACTCCAACTCAGAA+CGG | 0.635435 | 4_3:-69626123 | Msa0659290:CDS |
| ATGGCTTGGCCAATGAACGA+TGG | 0.638310 | 4_3:-69626728 | Msa0659290:CDS |
| CCAAAATGATGGACCTGATG+AGG | 0.639090 | 4_3:-69625647 | Msa0659290:CDS |
| ATAAGAAGGAAGCCAACTGT+AGG | 0.639391 | 4_3:-69626649 | Msa0659290:CDS |
| CCACCACTATTATCTAACCT+AGG | 0.640445 | 4_3:-69625787 | Msa0659290:CDS |
| GTCATCAATCAAAGCTGCGG+TGG | 0.640591 | 4_3:+69632458 | None:intergenic |
| AATAACTAAAACCATGTGGA+GGG | 0.640970 | 4_3:+69627500 | None:intergenic |
| GAAGGAAGCCAACTGTAGGA+CGG | 0.641559 | 4_3:-69626645 | Msa0659290:CDS |
| TTTGTCATCAATCAAAGCTG+CGG | 0.641784 | 4_3:+69632455 | None:intergenic |
| GATGCAGTAGAACATCGGAA+TGG | 0.651156 | 4_3:+69632317 | None:intergenic |
| TGCATCATGACAATTCTGAT+GGG | 0.655307 | 4_3:-69627198 | Msa0659290:CDS |
| AGAAAACAAAGGACGCGAAG+GGG | 0.656474 | 4_3:-69625621 | Msa0659290:CDS |
| CTGGGGAGTTAGATGAGCGG+AGG | 0.656706 | 4_3:-69628880 | Msa0659290:exon |
| CCTAGGTTAGATAATAGTGG+TGG | 0.658942 | 4_3:+69625787 | None:intergenic |
| TATGTGCGAGAGAGGCTGAG+AGG | 0.660778 | 4_3:+69626067 | None:intergenic |
| GAATAATCCCCACTCTCATG+GGG | 0.662424 | 4_3:+69627301 | None:intergenic |
| CATGGTGAAGAAAATGACAA+TGG | 0.665590 | 4_3:+69627389 | None:intergenic |
| GGAGCTGCTGACCAGTTCCG+AGG | 0.666304 | 4_3:+69626043 | None:intergenic |
| AGGCTAAGAGATGATAGATG+TGG | 0.672795 | 4_3:-69626887 | Msa0659290:CDS |
| AGTGAGATGCAGTAGAACAT+CGG | 0.673535 | 4_3:+69632312 | None:intergenic |
| AGGAGCCGGAGCCCTCCACA+TGG | 0.676758 | 4_3:-69627511 | Msa0659290:CDS |
| TGATGTGGTTTGGATAACGC+TGG | 0.678975 | 4_3:+69627092 | None:intergenic |
| GCTGAATAACTAAAACCATG+TGG | 0.683862 | 4_3:+69627496 | None:intergenic |
| ATAGAGCAATCATTCAAGCA+GGG | 0.687583 | 4_3:-69627118 | Msa0659290:CDS |
| TGATGAGGCAAAGAAAACAA+AGG | 0.690243 | 4_3:-69625632 | Msa0659290:CDS |
| ATAGCAGGGAAAGTAAACAC+AGG | 0.696445 | 4_3:-69627348 | Msa0659290:CDS |
| AAGTGAAGCTTAAGGCTCTG+GGG | 0.705378 | 4_3:-69628897 | Msa0659290:five_prime_UTR |
| CGATGATAGGAACAGAACGA+GGG | 0.705763 | 4_3:-69627470 | Msa0659290:CDS |
| AAGTAACTGGTACAGTACAG+CGG | 0.725762 | 4_3:-69625480 | Msa0659290:CDS |
| GCTCTGGGGAGTTAGATGAG+CGG | 0.746984 | 4_3:-69628883 | Msa0659290:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTAATTTAATAACAA+TGG | + | chr4_3:69629979-69629998 | None:intergenic | 10.0% |
| !! | ATATTTAAGAATAATTATAC+TGG | + | chr4_3:69631637-69631656 | None:intergenic | 10.0% |
| !!! | ATTTTTTAGATATAGACAAT+AGG | - | chr4_3:69627185-69627204 | Msa0659290:CDS | 15.0% |
| !! | TTAGTATAAAATCTAATACT+CGG | + | chr4_3:69628146-69628165 | None:intergenic | 15.0% |
| !!! | AATTGTTTTATAATCTTCTT+TGG | + | chr4_3:69630839-69630858 | None:intergenic | 15.0% |
| !!! | GTAATTTTTCAAAAAAACTA+GGG | + | chr4_3:69631273-69631292 | None:intergenic | 15.0% |
| !!! | TGTAATTTTTCAAAAAAACT+AGG | + | chr4_3:69631274-69631293 | None:intergenic | 15.0% |
| !! | TCATTCTATAAACGTAAATT+TGG | - | chr4_3:69624169-69624188 | Msa0659290:exon | 20.0% |
| !! | CAAAACAAATCAATATAGAT+TGG | + | chr4_3:69625179-69625198 | None:intergenic | 20.0% |
| !!! | CAATCTATATTGATTTGTTT+TGG | - | chr4_3:69625177-69625196 | Msa0659290:intron | 20.0% |
| !!! | ACATTTTAATAAAATGTCAG+AGG | - | chr4_3:69625808-69625827 | Msa0659290:CDS | 20.0% |
| !!! | TGTTAGATGCAATTTTTTTA+AGG | + | chr4_3:69626102-69626121 | None:intergenic | 20.0% |
| !! | TGAAAAATAAGTGTGAAAAA+CGG | + | chr4_3:69626280-69626299 | None:intergenic | 20.0% |
| !! | ACCAAAAACGTTATAAAATT+TGG | - | chr4_3:69626305-69626324 | Msa0659290:CDS | 20.0% |
| !!! | TATGTGTATTATTTCTTTTC+CGG | - | chr4_3:69626358-69626377 | Msa0659290:intron | 20.0% |
| !! | AACTATTAGAGAACTTATTA+AGG | - | chr4_3:69626807-69626826 | Msa0659290:CDS | 20.0% |
| !! | TTTAACTGAAAATCTGTATT+TGG | - | chr4_3:69627109-69627128 | Msa0659290:CDS | 20.0% |
| !! | CAATATGCAAAAAATGATTA+TGG | - | chr4_3:69628017-69628036 | Msa0659290:intron | 20.0% |
| !! | TATAAAGAAATGAGTTGTTA+AGG | + | chr4_3:69628616-69628635 | None:intergenic | 20.0% |
| !!! | TTATAGATACCTATTTTCTT+TGG | - | chr4_3:69628631-69628650 | Msa0659290:intron | 20.0% |
| !! | AAAGATAGAAAATTTCTTTC+AGG | + | chr4_3:69628741-69628760 | None:intergenic | 20.0% |
| !!! | TTTAATTATCTGCTTTTCTT+TGG | - | chr4_3:69628801-69628820 | Msa0659290:intron | 20.0% |
| !!! | TTTTTTGGAATCTTTATACT+AGG | + | chr4_3:69630538-69630557 | None:intergenic | 20.0% |
| !!! | TTTTGATGATTCTCTTAAAA+AGG | - | chr4_3:69630600-69630619 | Msa0659290:intron | 20.0% |
| !! | TTATAAAACAATTGTGAAGA+AGG | - | chr4_3:69630846-69630865 | Msa0659290:intron | 20.0% |
| !! | TCTATAAAACCAAGTTAAAT+GGG | + | chr4_3:69631042-69631061 | None:intergenic | 20.0% |
| !! | ATCTATAAAACCAAGTTAAA+TGG | + | chr4_3:69631043-69631062 | None:intergenic | 20.0% |
| !!! | TCAGAAATCATTAATTTTTC+TGG | - | chr4_3:69631085-69631104 | Msa0659290:intron | 20.0% |
| !!! | CAGAAATCATTAATTTTTCT+GGG | - | chr4_3:69631086-69631105 | Msa0659290:intron | 20.0% |
| !!! | AGAAATCATTAATTTTTCTG+GGG | - | chr4_3:69631087-69631106 | Msa0659290:intron | 20.0% |
| !! | ATTTCTCCTATTTAAATGAA+CGG | - | chr4_3:69631343-69631362 | Msa0659290:intron | 20.0% |
| !!! | ATGGATCATTTTAAACTTTT+TGG | + | chr4_3:69631511-69631530 | None:intergenic | 20.0% |
| !! | TAAAAAAGTGAGTTAAGAAA+AGG | + | chr4_3:69631699-69631718 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTGCGAAAAAAT+AGG | + | chr4_3:69631768-69631787 | None:intergenic | 20.0% |
| !! | TGTTGTATAAATATAAACTC+AGG | - | chr4_3:69632371-69632390 | Msa0659290:five_prime_UTR | 20.0% |
| !! | GTTGTATAAATATAAACTCA+GGG | - | chr4_3:69632372-69632391 | Msa0659290:five_prime_UTR | 20.0% |
| !! | TTTTAACATTCTTCCATTCT+AGG | - | chr4_3:69624080-69624099 | Msa0659290:three_prime_UTR | 25.0% |
| ! | TTTAACATTCTTCCATTCTA+GGG | - | chr4_3:69624081-69624100 | Msa0659290:three_prime_UTR | 25.0% |
| ! | TCATAGAATTCCAATAACAA+TGG | + | chr4_3:69624115-69624134 | None:intergenic | 25.0% |
| ! | TATTGGGAGATAATCAAATA+TGG | + | chr4_3:69624398-69624417 | None:intergenic | 25.0% |
| ! | GTAATTATGGGGTTTATATT+GGG | + | chr4_3:69624414-69624433 | None:intergenic | 25.0% |
| ! | TGTAATTATGGGGTTTATAT+TGG | + | chr4_3:69624415-69624434 | None:intergenic | 25.0% |
| ! | TACCCAAGATTTGTAATTAT+GGG | + | chr4_3:69624426-69624445 | None:intergenic | 25.0% |
| ! | ATAATTACAAATCTTGGGTA+CGG | - | chr4_3:69624426-69624445 | Msa0659290:intron | 25.0% |
| ! | TAATTCTGTGTAATGTAAGT+AGG | - | chr4_3:69624469-69624488 | Msa0659290:intron | 25.0% |
| ! | GATATCAATTGAATAACCTA+TGG | + | chr4_3:69624549-69624568 | None:intergenic | 25.0% |
| ! | AAGCTATATTGAAGATCTTA+TGG | - | chr4_3:69624705-69624724 | Msa0659290:intron | 25.0% |
| ! | AATAGGATTATGACTTGATT+GGG | + | chr4_3:69624835-69624854 | None:intergenic | 25.0% |
| ! | AAATAGGATTATGACTTGAT+TGG | + | chr4_3:69624836-69624855 | None:intergenic | 25.0% |
| ! | TTATTCTGCTAACTCAAAAT+AGG | + | chr4_3:69625289-69625308 | None:intergenic | 25.0% |
| !! | TGAGTACTGTTAAATCTTAT+CGG | - | chr4_3:69625454-69625473 | Msa0659290:CDS | 25.0% |
| ! | TGAAAAATCTACATTCATGA+TGG | + | chr4_3:69625511-69625530 | None:intergenic | 25.0% |
| !! | TCATGAATGTAGATTTTTCA+TGG | - | chr4_3:69625511-69625530 | Msa0659290:CDS | 25.0% |
| !! | ATTTTTCTCAAATGCATAAG+AGG | - | chr4_3:69625602-69625621 | Msa0659290:CDS | 25.0% |
| !!! | CATCATTCACATGTTTTTTA+GGG | + | chr4_3:69625778-69625797 | None:intergenic | 25.0% |
| ! | ATAATACCTTCCCTAAAAAA+AGG | - | chr4_3:69625898-69625917 | Msa0659290:CDS | 25.0% |
| !!! | TAAGTTTTGGCCTTTTTTTA+GGG | + | chr4_3:69625911-69625930 | None:intergenic | 25.0% |
| !! | AAAGAAATGCAACTAAGTTT+TGG | + | chr4_3:69625924-69625943 | None:intergenic | 25.0% |
| ! | AAACTTAGTTGCATTTCTTT+AGG | - | chr4_3:69625924-69625943 | Msa0659290:CDS | 25.0% |
| !!! | CAAAGCATTATTTTAAGTGT+TGG | + | chr4_3:69626232-69626251 | None:intergenic | 25.0% |
| !! | GCCAAATTTTATAACGTTTT+TGG | + | chr4_3:69626309-69626328 | None:intergenic | 25.0% |
| !! | TAAACGGAATTTTCTTTTCT+AGG | + | chr4_3:69626331-69626350 | None:intergenic | 25.0% |
| ! | ATACACATAGGACAAATAAA+CGG | + | chr4_3:69626347-69626366 | None:intergenic | 25.0% |
| ! | GGAAAAGAAATAATACACAT+AGG | + | chr4_3:69626359-69626378 | None:intergenic | 25.0% |
| !!! | ATGTGTATTATTTCTTTTCC+GGG | - | chr4_3:69626359-69626378 | Msa0659290:intron | 25.0% |
| ! | GTAAGATAAAGAATATCCAT+AGG | + | chr4_3:69626410-69626429 | None:intergenic | 25.0% |
| !! | AGTTCTCTAATAGTTTTTCA+GGG | + | chr4_3:69626802-69626821 | None:intergenic | 25.0% |
| !! | AAGTTCTCTAATAGTTTTTC+AGG | + | chr4_3:69626803-69626822 | None:intergenic | 25.0% |
| ! | TGATCTAGATATTAATGAGT+TGG | - | chr4_3:69626831-69626850 | Msa0659290:CDS | 25.0% |
| ! | AATAAGAACATAGAACATGA+GGG | + | chr4_3:69627276-69627295 | None:intergenic | 25.0% |
| ! | ATCAGTTATATTTGTGACTA+TGG | - | chr4_3:69627330-69627349 | Msa0659290:CDS | 25.0% |
| ! | ATGTCTATAGATTGTTATGA+CGG | - | chr4_3:69627610-69627629 | Msa0659290:intron | 25.0% |
| ! | AAAACACAAACTGTATTCTA+TGG | + | chr4_3:69627664-69627683 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTCTTCTTCATTT+AGG | - | chr4_3:69628172-69628191 | Msa0659290:intron | 25.0% |
| ! | TTAATTAGTATTGCAGTTGT+GGG | + | chr4_3:69628301-69628320 | None:intergenic | 25.0% |
| ! | ATTAATTAGTATTGCAGTTG+TGG | + | chr4_3:69628302-69628321 | None:intergenic | 25.0% |
| ! | GTATACAAGTTTATTATCAC+CGG | + | chr4_3:69628349-69628368 | None:intergenic | 25.0% |
| !! | ATTTTTATGTGACATTTCAG+TGG | - | chr4_3:69628431-69628450 | Msa0659290:CDS | 25.0% |
| !!! | ATCAACGTACATTTTTTTAG+AGG | + | chr4_3:69628547-69628566 | None:intergenic | 25.0% |
| !! | AAAAAAATGTACGTTGATTG+TGG | - | chr4_3:69628549-69628568 | Msa0659290:CDS | 25.0% |
| ! | ACATTCTAACCAAAGAAAAT+AGG | + | chr4_3:69628643-69628662 | None:intergenic | 25.0% |
| !!! | TGATGGGTTTGATAAAATTT+CGG | - | chr4_3:69629176-69629195 | Msa0659290:intron | 25.0% |
| !!! | CTTGCAAATTTTTTGCTTTT+GGG | - | chr4_3:69629298-69629317 | Msa0659290:intron | 25.0% |
| !! | ACCATTTTCAATTGATAAGA+AGG | - | chr4_3:69629695-69629714 | Msa0659290:intron | 25.0% |
| ! | TCCTTCTTATCAATTGAAAA+TGG | + | chr4_3:69629699-69629718 | None:intergenic | 25.0% |
| ! | TCAGCAATAAAATAATTACC+TGG | + | chr4_3:69629891-69629910 | None:intergenic | 25.0% |
| ! | TCAAAAGGGTAGAAAAATTA+AGG | + | chr4_3:69630022-69630041 | None:intergenic | 25.0% |
| !! | TTTTCTCAGTTGAAAATTTC+TGG | + | chr4_3:69630162-69630181 | None:intergenic | 25.0% |
| ! | AATCTTTATACTAGGAGAAA+AGG | + | chr4_3:69630530-69630549 | None:intergenic | 25.0% |
| !! | AATCATCAAAATTTTGTCCT+AGG | + | chr4_3:69630591-69630610 | None:intergenic | 25.0% |
| !! | TTATTTTCAGATTGAGAGAT+TGG | + | chr4_3:69630655-69630674 | None:intergenic | 25.0% |
| !!! | TGTATAAGTTTGTTAACCTT+TGG | + | chr4_3:69630958-69630977 | None:intergenic | 25.0% |
| ! | AAAGGTTAACAAACTTATAC+AGG | - | chr4_3:69630957-69630976 | Msa0659290:intron | 25.0% |
| !! | GAAATCATTAATTTTTCTGG+GGG | - | chr4_3:69631088-69631107 | Msa0659290:intron | 25.0% |
| !! | AAATCATTAATTTTTCTGGG+GGG | - | chr4_3:69631089-69631108 | Msa0659290:intron | 25.0% |
| !! | TGAGATTAAATTTTGTACCT+AGG | - | chr4_3:69631155-69631174 | Msa0659290:intron | 25.0% |
| ! | TTTGAACCGTTCATTTAAAT+AGG | + | chr4_3:69631352-69631371 | None:intergenic | 25.0% |
| !! | CAAATTAATTCTTTCTAGAG+TGG | - | chr4_3:69631368-69631387 | Msa0659290:intron | 25.0% |
| !!! | AGTGATTTTAATGGTTGAAA+GGG | - | chr4_3:69631408-69631427 | Msa0659290:intron | 25.0% |
| ! | AAAGAGATAAGAAAAATTCC+CGG | + | chr4_3:69631472-69631491 | None:intergenic | 25.0% |
| !!! | GTTATTTTTAAGGCTCTATT+TGG | + | chr4_3:69631547-69631566 | None:intergenic | 25.0% |
| !!! | CAATTGCTTGGTTATTTTTA+AGG | + | chr4_3:69631557-69631576 | None:intergenic | 25.0% |
| ! | TAAAAATAACCAAGCAATTG+AGG | - | chr4_3:69631557-69631576 | Msa0659290:intron | 25.0% |
| !!! | TAATAGTTTGTTTCTTGACT+TGG | + | chr4_3:69631871-69631890 | None:intergenic | 25.0% |
| ! | ACCAGTTGAAATAATATGAT+GGG | + | chr4_3:69631959-69631978 | None:intergenic | 25.0% |
| ! | AACCAGTTGAAATAATATGA+TGG | + | chr4_3:69631960-69631979 | None:intergenic | 25.0% |
| ! | TAGTTTACAAACCAAACATT+AGG | - | chr4_3:69632456-69632475 | Msa0659290:five_prime_UTR | 25.0% |
| TGAAGAGAAACAAAAAGAAG+AGG | - | chr4_3:69623860-69623879 | Msa0659290:three_prime_UTR | 30.0% | |
| ! | AGCTTTGATTGATGACAAAA+CGG | - | chr4_3:69623907-69623926 | Msa0659290:three_prime_UTR | 30.0% |
| ! | TGATAGATGGTTTAGGATAT+TGG | + | chr4_3:69623984-69624003 | None:intergenic | 30.0% |
| GAATGGAAGAATGTTAAAAG+AGG | + | chr4_3:69624079-69624098 | None:intergenic | 30.0% | |
| AGAATTCCAATAACAATGGA+AGG | + | chr4_3:69624111-69624130 | None:intergenic | 30.0% | |
| TTCAAACAGAATAGAGTACA+AGG | + | chr4_3:69624146-69624165 | None:intergenic | 30.0% | |
| GATTCACAAAACAACAATAG+CGG | + | chr4_3:69624201-69624220 | None:intergenic | 30.0% | |
| AGAAACTGTTCAAACATTAC+TGG | - | chr4_3:69624307-69624326 | Msa0659290:intron | 30.0% | |
| GAAACTGTTCAAACATTACT+GGG | - | chr4_3:69624308-69624327 | Msa0659290:intron | 30.0% | |
| AACCCCATAATTACAAATCT+TGG | - | chr4_3:69624420-69624439 | Msa0659290:intron | 30.0% | |
| ACCCCATAATTACAAATCTT+GGG | - | chr4_3:69624421-69624440 | Msa0659290:intron | 30.0% | |
| ACCCAAGATTTGTAATTATG+GGG | + | chr4_3:69624425-69624444 | None:intergenic | 30.0% | |
| GTACCCAAGATTTGTAATTA+TGG | + | chr4_3:69624427-69624446 | None:intergenic | 30.0% | |
| TAATTACAAATCTTGGGTAC+GGG | - | chr4_3:69624427-69624446 | Msa0659290:intron | 30.0% | |
| GGTTATTCAATTGATATCGA+TGG | - | chr4_3:69624551-69624570 | Msa0659290:intron | 30.0% | |
| ! | TTAAGTTGCTTATCCAAACA+GGG | + | chr4_3:69624584-69624603 | None:intergenic | 30.0% |
| ! | ATTAAGTTGCTTATCCAAAC+AGG | + | chr4_3:69624585-69624604 | None:intergenic | 30.0% |
| TAATCTTCAGGTCAACAAAT+AGG | + | chr4_3:69624852-69624871 | None:intergenic | 30.0% | |
| ! | TATTTGTTGACCTGAAGATT+AGG | - | chr4_3:69624851-69624870 | Msa0659290:intron | 30.0% |
| ! | CCAAGTGGGTATATTTTATA+TGG | + | chr4_3:69624918-69624937 | None:intergenic | 30.0% |
| CCATATAAAATATACCCACT+TGG | - | chr4_3:69624915-69624934 | Msa0659290:intron | 30.0% | |
| AAGTATATCCAATTAGCACT+TGG | + | chr4_3:69625031-69625050 | None:intergenic | 30.0% | |
| TGGTGTAAATATGTTCACAA+TGG | - | chr4_3:69625109-69625128 | Msa0659290:intron | 30.0% | |
| TAGGCTACATAACTCAAAAT+AGG | + | chr4_3:69625228-69625247 | None:intergenic | 30.0% | |
| TTATGAGAATATGTATCCCT+TGG | - | chr4_3:69625537-69625556 | Msa0659290:CDS | 30.0% | |
| !! | TTAAGACTTGCTATTGTCAT+TGG | - | chr4_3:69625637-69625656 | Msa0659290:CDS | 30.0% |
| TTGTCATTGGCAAAAGATTT+AGG | - | chr4_3:69625650-69625669 | Msa0659290:CDS | 30.0% | |
| !!! | TGTTTTTTAGGGTGTAGAAT+GGG | + | chr4_3:69625767-69625786 | None:intergenic | 30.0% |
| !!! | ATGTTTTTTAGGGTGTAGAA+TGG | + | chr4_3:69625768-69625787 | None:intergenic | 30.0% |
| !!! | GCATCATTCACATGTTTTTT+AGG | + | chr4_3:69625779-69625798 | None:intergenic | 30.0% |
| TTTAATAAAATGTCAGAGGC+TGG | - | chr4_3:69625812-69625831 | Msa0659290:CDS | 30.0% | |
| !! | CTAAGTTTTGGCCTTTTTTT+AGG | + | chr4_3:69625912-69625931 | None:intergenic | 30.0% |
| ! | TTCTTTAGGTGTTTTTCTTG+TGG | - | chr4_3:69625938-69625957 | Msa0659290:CDS | 30.0% |
| AACAAACTTCGAGAAAATTG+TGG | + | chr4_3:69626007-69626026 | None:intergenic | 30.0% | |
| ATTATCACAGATTTCTGTTG+TGG | - | chr4_3:69626189-69626208 | Msa0659290:CDS | 30.0% | |
| AAAATAAGTGTGAAAAACGG+AGG | + | chr4_3:69626277-69626296 | None:intergenic | 30.0% | |
| TCTGTATGTTGAATTGTACA+AGG | - | chr4_3:69626384-69626403 | Msa0659290:intron | 30.0% | |
| TATTGTATGGAATGTCATGT+TGG | - | chr4_3:69626447-69626466 | Msa0659290:intron | 30.0% | |
| TATTGTATGGAATGTCATGT+TGG | - | chr4_3:69626447-69626466 | Msa0659290:intron | 30.0% | |
| ACAATATTTGAGAGAGAGTT+GGG | - | chr4_3:69626641-69626660 | Msa0659290:CDS | 30.0% | |
| AACACCTATCATTGAAAAGA+TGG | - | chr4_3:69626666-69626685 | Msa0659290:CDS | 30.0% | |
| TTTGGATATTCTTTATCGAG+AGG | - | chr4_3:69626940-69626959 | Msa0659290:CDS | 30.0% | |
| AAACTGTTAATGATTCCTCA+AGG | - | chr4_3:69627046-69627065 | Msa0659290:CDS | 30.0% | |
| CTGAAAATCTGTATTTGGAT+AGG | - | chr4_3:69627114-69627133 | Msa0659290:CDS | 30.0% | |
| !! | CTTACCCTGTATTTGTTTTT+AGG | - | chr4_3:69627235-69627254 | Msa0659290:CDS | 30.0% |
| TCCTCCTAAAAACAAATACA+GGG | + | chr4_3:69627242-69627261 | None:intergenic | 30.0% | |
| ATCCTCCTAAAAACAAATAC+AGG | + | chr4_3:69627243-69627262 | None:intergenic | 30.0% | |
| GAATAAGAACATAGAACATG+AGG | + | chr4_3:69627277-69627296 | None:intergenic | 30.0% | |
| ATTAACCAAAGTGAAGCTTA+AGG | - | chr4_3:69627453-69627472 | Msa0659290:CDS | 30.0% | |
| TTACTAAAAGCAGTAGTTCA+AGG | - | chr4_3:69627799-69627818 | Msa0659290:intron | 30.0% | |
| ATGCAAAAAATGATTATGGC+AGG | - | chr4_3:69628021-69628040 | Msa0659290:intron | 30.0% | |
| ! | TTCATTTAGGATTGAGTCTA+AGG | - | chr4_3:69628185-69628204 | Msa0659290:intron | 30.0% |
| AGCCAAAGTTTCTTAATCTA+GGG | + | chr4_3:69628492-69628511 | None:intergenic | 30.0% | |
| TAGCCAAAGTTTCTTAATCT+AGG | + | chr4_3:69628493-69628512 | None:intergenic | 30.0% | |
| ! | GTTTAGAAGCTAAAGCTTTT+AGG | - | chr4_3:69628520-69628539 | Msa0659290:CDS | 30.0% |
| AATAACTAAAACCATGTGGA+GGG | + | chr4_3:69628861-69628880 | None:intergenic | 30.0% | |
| AGCTTGCATTTATTATGCAA+AGG | - | chr4_3:69629104-69629123 | Msa0659290:intron | 30.0% | |
| GCTTGCATTTATTATGCAAA+GGG | - | chr4_3:69629105-69629124 | Msa0659290:intron | 30.0% | |
| CCAAAAGCAAAAAATTTGCA+AGG | + | chr4_3:69629300-69629319 | None:intergenic | 30.0% | |
| !!! | CCTTGCAAATTTTTTGCTTT+TGG | - | chr4_3:69629297-69629316 | Msa0659290:intron | 30.0% |
| !! | TTTTTGCTTTTGGGAATTGT+CGG | - | chr4_3:69629307-69629326 | Msa0659290:intron | 30.0% |
| GACAACAAAAATGGAATCAT+AGG | - | chr4_3:69629588-69629607 | Msa0659290:intron | 30.0% | |
| ATGCTCATCTTTAATATGAC+TGG | + | chr4_3:69629844-69629863 | None:intergenic | 30.0% | |
| TTAGAGTAGAATGAACTTGT+GGG | + | chr4_3:69630339-69630358 | None:intergenic | 30.0% | |
| ! | TTTAGAGTAGAATGAACTTG+TGG | + | chr4_3:69630340-69630359 | None:intergenic | 30.0% |
| TTGATGAATGTCATAGAAAC+AGG | + | chr4_3:69630418-69630437 | None:intergenic | 30.0% | |
| CCATTTGCACTAATATTCAT+GGG | + | chr4_3:69630496-69630515 | None:intergenic | 30.0% | |
| CCATGAATATTAGTGCAAAT+GGG | - | chr4_3:69630494-69630513 | Msa0659290:intron | 30.0% | |
| CATGAATATTAGTGCAAATG+GGG | - | chr4_3:69630495-69630514 | Msa0659290:intron | 30.0% | |
| TTTATACTAGGAGAAAAGGT+TGG | + | chr4_3:69630526-69630545 | None:intergenic | 30.0% | |
| AAAGATTCCAAAAAATGCAG+TGG | - | chr4_3:69630543-69630562 | Msa0659290:intron | 30.0% | |
| TAAAAAGGAGACTAACGAAA+CGG | - | chr4_3:69630615-69630634 | Msa0659290:intron | 30.0% | |
| TTCATTGGTAGAGCTTATTA+AGG | - | chr4_3:69630777-69630796 | Msa0659290:intron | 30.0% | |
| ! | ATTTTACCATCTTTCCATGT+TGG | + | chr4_3:69630814-69630833 | None:intergenic | 30.0% |
| AAGGTTACTGATAAAGTAAC+TGG | - | chr4_3:69630865-69630884 | Msa0659290:intron | 30.0% | |
| TTTATCAGTTTCGAAACCAA+AGG | - | chr4_3:69630939-69630958 | Msa0659290:intron | 30.0% | |
| ATTTCCGTCATATGTATGAA+GGG | - | chr4_3:69631001-69631020 | Msa0659290:intron | 30.0% | |
| AAATATACATTGATCTCCCA+TGG | - | chr4_3:69631224-69631243 | Msa0659290:intron | 30.0% | |
| AATATACATTGATCTCCCAT+GGG | - | chr4_3:69631225-69631244 | Msa0659290:intron | 30.0% | |
| AAAGAACAGTGATGAGAATT+TGG | + | chr4_3:69631301-69631320 | None:intergenic | 30.0% | |
| !! | TTAATTCTTTCTAGAGTGGT+TGG | - | chr4_3:69631372-69631391 | Msa0659290:intron | 30.0% |
| !! | GAGTGATTTTAATGGTTGAA+AGG | - | chr4_3:69631407-69631426 | Msa0659290:intron | 30.0% |
| !! | GTGATTTTAATGGTTGAAAG+GGG | - | chr4_3:69631409-69631428 | Msa0659290:intron | 30.0% |
| TGTAAATAATGTGAACCTCA+AGG | - | chr4_3:69631607-69631626 | Msa0659290:intron | 30.0% | |
| ! | TAAAGATGTCCTTGTTTCAT+AGG | - | chr4_3:69631807-69631826 | Msa0659290:intron | 30.0% |
| ! | AAAGATGTCCTTGTTTCATA+GGG | - | chr4_3:69631808-69631827 | Msa0659290:intron | 30.0% |
| AAACAAACTATTAGCTCACT+AGG | - | chr4_3:69631878-69631897 | Msa0659290:intron | 30.0% | |
| ACCCATCATATTATTTCAAC+TGG | - | chr4_3:69631955-69631974 | Msa0659290:intron | 30.0% | |
| ! | ACTTTATTCTCTTTTTGTGC+AGG | - | chr4_3:69632153-69632172 | Msa0659290:intron | 30.0% |
| CAAGCATAAATAAATACGCA+AGG | + | chr4_3:69632277-69632296 | None:intergenic | 30.0% | |
| TGCAAATTATACATCATCTG+AGG | + | chr4_3:69632338-69632357 | None:intergenic | 30.0% | |
| AATAACAGTTGCCTAATGTT+TGG | + | chr4_3:69632470-69632489 | None:intergenic | 30.0% | |
| TTTGTCATCAATCAAAGCTG+CGG | + | chr4_3:69623906-69623925 | None:intergenic | 35.0% | |
| AAGACGATGATAGATGGTTT+AGG | + | chr4_3:69623991-69624010 | None:intergenic | 35.0% | |
| ! | GGTTTTCCTTCCATTGTTAT+TGG | - | chr4_3:69624102-69624121 | Msa0659290:three_prime_UTR | 35.0% |
| AATAACCTATGGTCAAGCAA+GGG | + | chr4_3:69624538-69624557 | None:intergenic | 35.0% | |
| AAACAAAACGCCTAATCTTC+AGG | + | chr4_3:69624864-69624883 | None:intergenic | 35.0% | |
| TTCCAAAATTCCAACTCTAC+TGG | + | chr4_3:69624970-69624989 | None:intergenic | 35.0% | |
| ! | GTATTTTCTTGTCACGTTCA+TGG | - | chr4_3:69625059-69625078 | Msa0659290:intron | 35.0% |
| GCTAGATTGTTGTAGTTGTT+TGG | - | chr4_3:69625564-69625583 | Msa0659290:CDS | 35.0% | |
| TATATCAGTCTGTGAGATCA+AGG | - | chr4_3:69625695-69625714 | Msa0659290:CDS | 35.0% | |
| ATATCAGTCTGTGAGATCAA+GGG | - | chr4_3:69625696-69625715 | Msa0659290:CDS | 35.0% | |
| GTGAGATCAAGGGTTTAAAT+AGG | - | chr4_3:69625706-69625725 | Msa0659290:CDS | 35.0% | |
| !!! | TTTTGGCCTTTTTTTAGGGA+AGG | + | chr4_3:69625907-69625926 | None:intergenic | 35.0% |
| !!! | TCTCGAAGTTTGTTTTAAGC+AGG | - | chr4_3:69626013-69626032 | Msa0659290:CDS | 35.0% |
| CAATTCAACATACAGATACC+CGG | + | chr4_3:69626380-69626399 | None:intergenic | 35.0% | |
| GTAAGAGCGATACTATTGTA+TGG | - | chr4_3:69626434-69626453 | Msa0659290:intron | 35.0% | |
| !! | ACTCTCGTGTTGATTCTTTA+CGG | + | chr4_3:69626474-69626493 | None:intergenic | 35.0% |
| GTAAGAGCGATACTATTGTA+TGG | - | chr4_3:69626434-69626453 | Msa0659290:intron | 35.0% | |
| !! | ACTCTCGTGTTGATTCTTTA+CGG | + | chr4_3:69626474-69626493 | None:intergenic | 35.0% |
| AAAATAAGCGAACATAGACG+AGG | - | chr4_3:69626569-69626588 | Msa0659290:CDS | 35.0% | |
| GACAATATTTGAGAGAGAGT+TGG | - | chr4_3:69626640-69626659 | Msa0659290:CDS | 35.0% | |
| ! | TCTGCCATCTTTTCAATGAT+AGG | + | chr4_3:69626673-69626692 | None:intergenic | 35.0% |
| AAACTCGAATTAGGTGGTTT+GGG | - | chr4_3:69626692-69626711 | Msa0659290:CDS | 35.0% | |
| ! | GACATCTAGATTTTGCAGTA+AGG | - | chr4_3:69626728-69626747 | Msa0659290:CDS | 35.0% |
| AGTAAGGAGAGTAAATCAGA+TGG | - | chr4_3:69626744-69626763 | Msa0659290:CDS | 35.0% | |
| !!! | ATAAAGCCTGGTTGTTGTTT+TGG | - | chr4_3:69626922-69626941 | Msa0659290:CDS | 35.0% |
| GAATATCCAAAACAACAACC+AGG | + | chr4_3:69626931-69626950 | None:intergenic | 35.0% | |
| ACGAATAGAAAACCTTCCTT+AGG | + | chr4_3:69626994-69627013 | None:intergenic | 35.0% | |
| !!! | ACCCTGTATTTGTTTTTAGG+AGG | - | chr4_3:69627238-69627257 | Msa0659290:CDS | 35.0% |
| CAGAAAGCTATCTTCAAACT+GGG | - | chr4_3:69627504-69627523 | Msa0659290:CDS | 35.0% | |
| GGCATAAGTTCTTCAGAATA+TGG | - | chr4_3:69627631-69627650 | Msa0659290:intron | 35.0% | |
| ! | GCTTTTAGTAACACCTGTAA+AGG | + | chr4_3:69627790-69627809 | None:intergenic | 35.0% |
| ! | AAGCAGTAGTTCAAGGTATT+TGG | - | chr4_3:69627806-69627825 | Msa0659290:intron | 35.0% |
| ATACGCTAAAACCAAGAATG+AGG | - | chr4_3:69627838-69627857 | Msa0659290:intron | 35.0% | |
| CAATTGTTGCATCCAAAACT+TGG | + | chr4_3:69627923-69627942 | None:intergenic | 35.0% | |
| ACAATTGCAAAAGACACTGA+TGG | - | chr4_3:69627936-69627955 | Msa0659290:intron | 35.0% | |
| !! | TACAATATGAAAGTGTCTCC+AGG | - | chr4_3:69627963-69627982 | Msa0659290:intron | 35.0% |
| !! | ACAATATGAAAGTGTCTCCA+GGG | - | chr4_3:69627964-69627983 | Msa0659290:intron | 35.0% |
| GTTTGAGGAATGGAACAATA+GGG | - | chr4_3:69627986-69628005 | Msa0659290:intron | 35.0% | |
| ! | ACCATTAGTTTCCAACATCA+GGG | + | chr4_3:69628083-69628102 | None:intergenic | 35.0% |
| ! | AACCATTAGTTTCCAACATC+AGG | + | chr4_3:69628084-69628103 | None:intergenic | 35.0% |
| ! | GTTTCTTAATCTAGGGCTAT+AGG | + | chr4_3:69628485-69628504 | None:intergenic | 35.0% |
| AGCCCTAGATTAAGAAACTT+TGG | - | chr4_3:69628487-69628506 | Msa0659290:CDS | 35.0% | |
| ! | TGGATATTTTCAGACGCAAT+TGG | - | chr4_3:69628775-69628794 | Msa0659290:intron | 35.0% |
| GAATAACTAAAACCATGTGG+AGG | + | chr4_3:69628862-69628881 | None:intergenic | 35.0% | |
| GCTGAATAACTAAAACCATG+TGG | + | chr4_3:69628865-69628884 | None:intergenic | 35.0% | |
| !!! | CTTGTAGAGATTTTGCTGTT+GGG | - | chr4_3:69628929-69628948 | Msa0659290:five_prime_UTR | 35.0% |
| CATGGTGAAGAAAATGACAA+TGG | + | chr4_3:69628972-69628991 | None:intergenic | 35.0% | |
| CCTCATAACTTTGCTTATCA+TGG | + | chr4_3:69628990-69629009 | None:intergenic | 35.0% | |
| CCATGATAAGCAAAGTTATG+AGG | - | chr4_3:69628987-69629006 | Msa0659290:intron | 35.0% | |
| TCATGGGGATTAGAATATCT+GGG | + | chr4_3:69629045-69629064 | None:intergenic | 35.0% | |
| GCATTTATTATGCAAAGGGA+AGG | - | chr4_3:69629109-69629128 | Msa0659290:intron | 35.0% | |
| TGCATCATGACAATTCTGAT+GGG | - | chr4_3:69629160-69629179 | Msa0659290:intron | 35.0% | |
| AGATGAATCATCTAGGGAAA+GGG | - | chr4_3:69629200-69629219 | Msa0659290:intron | 35.0% | |
| ATAGAGCAATCATTCAAGCA+GGG | - | chr4_3:69629240-69629259 | Msa0659290:intron | 35.0% | |
| ATTTACCAGCCCTAGATTAA+GGG | - | chr4_3:69629368-69629387 | Msa0659290:intron | 35.0% | |
| ACCTATCATCCCTTAATCTA+GGG | + | chr4_3:69629380-69629399 | None:intergenic | 35.0% | |
| ATCCCAACCTTTATCTACAT+CGG | + | chr4_3:69629514-69629533 | None:intergenic | 35.0% | |
| TTGGTTGAGGACAACAAAAA+TGG | - | chr4_3:69629579-69629598 | Msa0659290:intron | 35.0% | |
| ATGTCTCCTGATTGGAATTA+TGG | - | chr4_3:69629807-69629826 | Msa0659290:intron | 35.0% | |
| TTAGTCCTTGTCTGTCAAAA+GGG | + | chr4_3:69630036-69630055 | None:intergenic | 35.0% | |
| TTTAGTCCTTGTCTGTCAAA+AGG | + | chr4_3:69630037-69630056 | None:intergenic | 35.0% | |
| GAATATAACTGCTTCCCATT+TGG | - | chr4_3:69630069-69630088 | Msa0659290:intron | 35.0% | |
| TTGACTTTGTCCAACCAAAT+GGG | + | chr4_3:69630086-69630105 | None:intergenic | 35.0% | |
| TTCAATAATTCTTGCTCCTG+GGG | + | chr4_3:69630128-69630147 | None:intergenic | 35.0% | |
| CTTCAATAATTCTTGCTCCT+GGG | + | chr4_3:69630129-69630148 | None:intergenic | 35.0% | |
| AATGCAAGCCTATCACAAAT+CGG | - | chr4_3:69630208-69630227 | Msa0659290:intron | 35.0% | |
| TCTTCGGAAGCAAAATTGAA+GGG | - | chr4_3:69630383-69630402 | Msa0659290:intron | 35.0% | |
| TACTGTTTCAATCCAATAGC+AGG | + | chr4_3:69630448-69630467 | None:intergenic | 35.0% | |
| TGATCCAATGTTTGACAGTA+TGG | - | chr4_3:69630468-69630487 | Msa0659290:intron | 35.0% | |
| CCCATGAATATTAGTGCAAA+TGG | - | chr4_3:69630493-69630512 | Msa0659290:intron | 35.0% | |
| CCCATTTGCACTAATATTCA+TGG | + | chr4_3:69630497-69630516 | None:intergenic | 35.0% | |
| !!! | GGAATTTCCACTGCATTTTT+TGG | + | chr4_3:69630553-69630572 | None:intergenic | 35.0% |
| TGTCCTAGGTTAGATAATAG+TGG | + | chr4_3:69630577-69630596 | None:intergenic | 35.0% | |
| TACAGAAGAGAATAGTCCTA+TGG | - | chr4_3:69630678-69630697 | Msa0659290:intron | 35.0% | |
| ACAGAAGAGAATAGTCCTAT+GGG | - | chr4_3:69630679-69630698 | Msa0659290:intron | 35.0% | |
| !! | TTTGTTTTCTTTGCCTCATC+AGG | + | chr4_3:69630727-69630746 | None:intergenic | 35.0% |
| TGATGAGGCAAAGAAAACAA+AGG | - | chr4_3:69630726-69630745 | Msa0659290:intron | 35.0% | |
| TCGTGCATTTAAGTCTTCAT+TGG | - | chr4_3:69630762-69630781 | Msa0659290:intron | 35.0% | |
| AACAAACTTATACAGGTCAG+TGG | - | chr4_3:69630964-69630983 | Msa0659290:intron | 35.0% | |
| GATTTCCGTCATATGTATGA+AGG | - | chr4_3:69631000-69631019 | Msa0659290:intron | 35.0% | |
| TGAACCCTTCATACATATGA+CGG | + | chr4_3:69631008-69631027 | None:intergenic | 35.0% | |
| TTTGATGTGGAAAGAGTTGT+AGG | - | chr4_3:69631117-69631136 | Msa0659290:intron | 35.0% | |
| ATAGCACAAATTGAACACCT+AGG | + | chr4_3:69631175-69631194 | None:intergenic | 35.0% | |
| ATATACATTGATCTCCCATG+GGG | - | chr4_3:69631226-69631245 | Msa0659290:intron | 35.0% | |
| ATAATTAGCGTAAACCCCAT+GGG | + | chr4_3:69631243-69631262 | None:intergenic | 35.0% | |
| TATAATTAGCGTAAACCCCA+TGG | + | chr4_3:69631244-69631263 | None:intergenic | 35.0% | |
| AACAGTGATGAGAATTTGGT+AGG | + | chr4_3:69631297-69631316 | None:intergenic | 35.0% | |
| ! | TACAAGGGGAGTGATTTTAA+TGG | - | chr4_3:69631399-69631418 | Msa0659290:intron | 35.0% |
| !! | ATTTTAATGGTTGAAAGGGG+AGG | - | chr4_3:69631412-69631431 | Msa0659290:intron | 35.0% |
| ! | TTTTAATGGTTGAAAGGGGA+GGG | - | chr4_3:69631413-69631432 | Msa0659290:intron | 35.0% |
| AATAACCAAGCAATTGAGGA+TGG | - | chr4_3:69631561-69631580 | Msa0659290:intron | 35.0% | |
| TTATACCATCCTCAATTGCT+TGG | + | chr4_3:69631569-69631588 | None:intergenic | 35.0% | |
| AATTATACTGGACTACCTTG+AGG | + | chr4_3:69631625-69631644 | None:intergenic | 35.0% | |
| ACTATTAGCTCACTAGGTTA+AGG | - | chr4_3:69631884-69631903 | Msa0659290:intron | 35.0% | |
| AAAAGATGGTCCAATGCATA+AGG | + | chr4_3:69631929-69631948 | None:intergenic | 35.0% | |
| !! | TGATGGGTTCAAGAAAAAGA+TGG | + | chr4_3:69631943-69631962 | None:intergenic | 35.0% |
| GTAATTGTAGATTCAGAAGC+TGG | + | chr4_3:69632061-69632080 | None:intergenic | 35.0% | |
| TTACCTGTTTGATGCAATTG+AGG | - | chr4_3:69632496-69632515 | Msa0659290:five_prime_UTR | 35.0% | |
| TACCTGTTTGATGCAATTGA+GGG | - | chr4_3:69632497-69632516 | Msa0659290:five_prime_UTR | 35.0% | |
| TAGGATATTGGAGAGTGAGA+GGG | + | chr4_3:69623972-69623991 | None:intergenic | 40.0% | |
| TTAGGATATTGGAGAGTGAG+AGG | + | chr4_3:69623973-69623992 | None:intergenic | 40.0% | |
| GCATAGAAGACGATGATAGA+TGG | + | chr4_3:69623997-69624016 | None:intergenic | 40.0% | |
| CTATCATCGTCTTCTATGCA+CGG | - | chr4_3:69623998-69624017 | Msa0659290:three_prime_UTR | 40.0% | |
| AGTGAGATGCAGTAGAACAT+CGG | + | chr4_3:69624049-69624068 | None:intergenic | 40.0% | |
| ATGGAAGGAAAACCCTAGAA+TGG | + | chr4_3:69624096-69624115 | None:intergenic | 40.0% | |
| ! | CTACTAGTCTCCATATCACT+TGG | + | chr4_3:69624336-69624355 | None:intergenic | 40.0% |
| TAGCATGAGAAATAGACGTG+CGG | - | chr4_3:69624353-69624372 | Msa0659290:intron | 40.0% | |
| GAATAACCTATGGTCAAGCA+AGG | + | chr4_3:69624539-69624558 | None:intergenic | 40.0% | |
| ! | AACTCTACTGGCTGATGTAT+CGG | + | chr4_3:69624958-69624977 | None:intergenic | 40.0% |
| ! | AGCCAGTAGAGTTGGAATTT+TGG | - | chr4_3:69624965-69624984 | Msa0659290:intron | 40.0% |
| CAACAAGACCAAGTGCTAAT+TGG | - | chr4_3:69625020-69625039 | Msa0659290:intron | 40.0% | |
| ! | TTTTCTTGTCACGTTCATGG+AGG | - | chr4_3:69625062-69625081 | Msa0659290:intron | 40.0% |
| ACCAACTTACTCAAAGTAGC+TGG | - | chr4_3:69625089-69625108 | Msa0659290:intron | 40.0% | |
| ! | ACCAGCTACTTTGAGTAAGT+TGG | + | chr4_3:69625093-69625112 | None:intergenic | 40.0% |
| TGTCAAACATTGCTTGTGAG+AGG | + | chr4_3:69625143-69625162 | None:intergenic | 40.0% | |
| TAAGCGTTATCCCACTAAGT+GGG | + | chr4_3:69625252-69625271 | None:intergenic | 40.0% | |
| TTAAGCGTTATCCCACTAAG+TGG | + | chr4_3:69625253-69625272 | None:intergenic | 40.0% | |
| CTTTGATCTGTCTTGTGAGT+GGG | - | chr4_3:69625418-69625437 | Msa0659290:CDS | 40.0% | |
| CAACAATCTAGCACTTCCAA+GGG | + | chr4_3:69625556-69625575 | None:intergenic | 40.0% | |
| ACAACAATCTAGCACTTCCA+AGG | + | chr4_3:69625557-69625576 | None:intergenic | 40.0% | |
| GTGTGTGTGTATATCTAGCT+CGG | - | chr4_3:69625860-69625879 | Msa0659290:CDS | 40.0% | |
| !! | AACCACATGAAAAGCACCAA+AGG | - | chr4_3:69626057-69626076 | Msa0659290:CDS | 40.0% |
| !!! | TTCCTTTGGTGCTTTTCATG+TGG | + | chr4_3:69626062-69626081 | None:intergenic | 40.0% |
| ATACTTACGCGCATTTCCTT+TGG | + | chr4_3:69626076-69626095 | None:intergenic | 40.0% | |
| GTTGTGGAAGAAAATACGCA+CGG | - | chr4_3:69626205-69626224 | Msa0659290:CDS | 40.0% | |
| TTGTGGAAGAAAATACGCAC+GGG | - | chr4_3:69626206-69626225 | Msa0659290:CDS | 40.0% | |
| AACGGAGGAATAACAGTAAG+AGG | + | chr4_3:69626262-69626281 | None:intergenic | 40.0% | |
| GTTGAATTGTACAAGGCCTA+TGG | - | chr4_3:69626391-69626410 | Msa0659290:intron | 40.0% | |
| AGGATGTTGTGTTAGATGTG+TGG | - | chr4_3:69626589-69626608 | Msa0659290:CDS | 40.0% | |
| AGATGGCAGAAACTCGAATT+AGG | - | chr4_3:69626683-69626702 | Msa0659290:CDS | 40.0% | |
| GAAACTCGAATTAGGTGGTT+TGG | - | chr4_3:69626691-69626710 | Msa0659290:CDS | 40.0% | |
| GAGAGTAGTCAAATCACTAG+AGG | - | chr4_3:69626766-69626785 | Msa0659290:CDS | 40.0% | |
| CTTTATCCTACTAAGTGGGT+TGG | + | chr4_3:69626908-69626927 | None:intergenic | 40.0% | |
| ! | CAGGCTTTATCCTACTAAGT+GGG | + | chr4_3:69626912-69626931 | None:intergenic | 40.0% |
| GGATATTCTTTATCGAGAGG+AGG | - | chr4_3:69626943-69626962 | Msa0659290:CDS | 40.0% | |
| GTAGGCATATAAGCAACCTA+AGG | - | chr4_3:69626975-69626994 | Msa0659290:CDS | 40.0% | |
| GCATATAAGCAACCTAAGGA+AGG | - | chr4_3:69626979-69626998 | Msa0659290:CDS | 40.0% | |
| AAGAACATAGAACATGAGGG+AGG | + | chr4_3:69627273-69627292 | None:intergenic | 40.0% | |
| ! | TGCTTGAAGCATCAGAGTTT+GGG | - | chr4_3:69627366-69627385 | Msa0659290:CDS | 40.0% |
| AAAGTGAAGCTTAAGGCTCT+GGG | - | chr4_3:69627460-69627479 | Msa0659290:CDS | 40.0% | |
| GCAGAAAGCTATCTTCAAAC+TGG | - | chr4_3:69627503-69627522 | Msa0659290:CDS | 40.0% | |
| AAACAAACAGGCCTTACTCT+CGG | + | chr4_3:69627557-69627576 | None:intergenic | 40.0% | |
| TCGCAGAAACACAAACAAAC+AGG | + | chr4_3:69627569-69627588 | None:intergenic | 40.0% | |
| GCAATTGCTTATGGTGCATA+TGG | + | chr4_3:69627755-69627774 | None:intergenic | 40.0% | |
| ACCATAAGCAATTGCAGTCT+GGG | - | chr4_3:69627760-69627779 | Msa0659290:intron | 40.0% | |
| TTGCGTGAAAACCTCATTCT+TGG | + | chr4_3:69627852-69627871 | None:intergenic | 40.0% | |
| ! | AAGAATGAGGTTTTCACGCA+AGG | - | chr4_3:69627851-69627870 | Msa0659290:intron | 40.0% |
| ! | TGACGAAGACTACCAAGTTT+TGG | - | chr4_3:69627908-69627927 | Msa0659290:intron | 40.0% |
| GGTTTGAGGAATGGAACAAT+AGG | - | chr4_3:69627985-69628004 | Msa0659290:intron | 40.0% | |
| TTAGTTTCCAACATCAGGGT+CGG | + | chr4_3:69628079-69628098 | None:intergenic | 40.0% | |
| ACCCTGATGTTGGAAACTAA+TGG | - | chr4_3:69628079-69628098 | Msa0659290:intron | 40.0% | |
| ACCCAGATAGACACAATACA+CGG | + | chr4_3:69628589-69628608 | None:intergenic | 40.0% | |
| ATTCCGTATCTTCAACTGCA+AGG | - | chr4_3:69628690-69628709 | Msa0659290:intron | 40.0% | |
| CTACCTTGCAGTTGAAGATA+CGG | + | chr4_3:69628696-69628715 | None:intergenic | 40.0% | |
| !! | ATCTTTGAGATGTCTGTGTG+TGG | - | chr4_3:69628755-69628774 | Msa0659290:intron | 40.0% |
| ! | GCTTTTCTTTGGATATTGCC+AGG | - | chr4_3:69628812-69628831 | Msa0659290:intron | 40.0% |
| GTTATTCAGCTGTCGATGAT+AGG | - | chr4_3:69628875-69628894 | Msa0659290:exon | 40.0% | |
| CCAACAGCAAAATCTCTACA+AGG | + | chr4_3:69628931-69628950 | None:intergenic | 40.0% | |
| !! | CCTTGTAGAGATTTTGCTGT+TGG | - | chr4_3:69628928-69628947 | Msa0659290:five_prime_UTR | 40.0% |
| AGCAAAGTTATGAGGATAGC+AGG | - | chr4_3:69628995-69629014 | Msa0659290:intron | 40.0% | |
| GCAAAGTTATGAGGATAGCA+GGG | - | chr4_3:69628996-69629015 | Msa0659290:intron | 40.0% | |
| ATAGCAGGGAAAGTAAACAC+AGG | - | chr4_3:69629010-69629029 | Msa0659290:intron | 40.0% | |
| TTAGAATATCTGGGTCCATC+TGG | + | chr4_3:69629036-69629055 | None:intergenic | 40.0% | |
| CTCATGGGGATTAGAATATC+TGG | + | chr4_3:69629046-69629065 | None:intergenic | 40.0% | |
| TATTCTAATCCCCATGAGAG+TGG | - | chr4_3:69629048-69629067 | Msa0659290:intron | 40.0% | |
| ATTCTAATCCCCATGAGAGT+GGG | - | chr4_3:69629049-69629068 | Msa0659290:intron | 40.0% | |
| AGAATAATCCCCACTCTCAT+GGG | + | chr4_3:69629061-69629080 | None:intergenic | 40.0% | |
| GTGCATCATGACAATTCTGA+TGG | - | chr4_3:69629159-69629178 | Msa0659290:intron | 40.0% | |
| TTTCGGCAGATGAATCATCT+AGG | - | chr4_3:69629193-69629212 | Msa0659290:intron | 40.0% | |
| TTCGGCAGATGAATCATCTA+GGG | - | chr4_3:69629194-69629213 | Msa0659290:intron | 40.0% | |
| CAGATGAATCATCTAGGGAA+AGG | - | chr4_3:69629199-69629218 | Msa0659290:intron | 40.0% | |
| GGGAAAGGGAAATTGATAGA+AGG | - | chr4_3:69629214-69629233 | Msa0659290:intron | 40.0% | |
| CATAGAGCAATCATTCAAGC+AGG | - | chr4_3:69629239-69629258 | Msa0659290:intron | 40.0% | |
| GTCGGAATGGTAAAGATTGT+AGG | - | chr4_3:69629325-69629344 | Msa0659290:intron | 40.0% | |
| CATTTACCAGCCCTAGATTA+AGG | - | chr4_3:69629367-69629386 | Msa0659290:intron | 40.0% | |
| GACCTATCATCCCTTAATCT+AGG | + | chr4_3:69629381-69629400 | None:intergenic | 40.0% | |
| GAGTAATCAAGGTGAAGATC+AGG | - | chr4_3:69629404-69629423 | Msa0659290:intron | 40.0% | |
| ! | GCAACTGAATCGCTCAATTT+TGG | + | chr4_3:69629441-69629460 | None:intergenic | 40.0% |
| ATTCAGTTGCTCCTTATGGA+AGG | - | chr4_3:69629451-69629470 | Msa0659290:intron | 40.0% | |
| ! | TCATCTCTTAGCCTTCCATA+AGG | + | chr4_3:69629465-69629484 | None:intergenic | 40.0% |
| AGGCTAAGAGATGATAGATG+TGG | - | chr4_3:69629471-69629490 | Msa0659290:intron | 40.0% | |
| GATGATAGATGTGGTTCAGA+TGG | - | chr4_3:69629480-69629499 | Msa0659290:intron | 40.0% | |
| AGAATGGCCGATGTAGATAA+AGG | - | chr4_3:69629504-69629523 | Msa0659290:intron | 40.0% | |
| GATGTAGATAAAGGTTGGGA+TGG | - | chr4_3:69629513-69629532 | Msa0659290:intron | 40.0% | |
| GCAACTAAATCAGTCTGCAT+TGG | + | chr4_3:69629540-69629559 | None:intergenic | 40.0% | |
| ! | ACTGATTTAGTTGCTGTCTC+CGG | - | chr4_3:69629546-69629565 | Msa0659290:intron | 40.0% |
| ! | CTCAACCAAATTTTCTGTGC+CGG | + | chr4_3:69629568-69629587 | None:intergenic | 40.0% |
| TTCTGTTCCTGTCTAAGCTA+TGG | + | chr4_3:69629662-69629681 | None:intergenic | 40.0% | |
| ATAAGAAGGAAGCCAACTGT+AGG | - | chr4_3:69629709-69629728 | Msa0659290:intron | 40.0% | |
| ATTCTCATTTCCCAGTCAGT+AGG | - | chr4_3:69629756-69629775 | Msa0659290:intron | 40.0% | |
| ATGAACAGATGTCTCCTGAT+TGG | - | chr4_3:69629799-69629818 | Msa0659290:intron | 40.0% | |
| AAAACCATCTCATGTGCAAG+TGG | - | chr4_3:69629931-69629950 | Msa0659290:intron | 40.0% | |
| AAACCATCTCATGTGCAAGT+GGG | - | chr4_3:69629932-69629951 | Msa0659290:intron | 40.0% | |
| ! | TTCTACCCTTTTGACAGACA+AGG | - | chr4_3:69630028-69630047 | Msa0659290:intron | 40.0% |
| ATAACTGCTTCCCATTTGGT+TGG | - | chr4_3:69630073-69630092 | Msa0659290:intron | 40.0% | |
| CTTGACTTTGTCCAACCAAA+TGG | + | chr4_3:69630087-69630106 | None:intergenic | 40.0% | |
| TCAATAATTCTTGCTCCTGG+GGG | + | chr4_3:69630127-69630146 | None:intergenic | 40.0% | |
| CCTTCAATAATTCTTGCTCC+TGG | + | chr4_3:69630130-69630149 | None:intergenic | 40.0% | |
| CCAGGAGCAAGAATTATTGA+AGG | - | chr4_3:69630127-69630146 | Msa0659290:intron | 40.0% | |
| CTCTTCGGAAGCAAAATTGA+AGG | - | chr4_3:69630382-69630401 | Msa0659290:intron | 40.0% | |
| TTCAATCCAATAGCAGGATC+TGG | + | chr4_3:69630442-69630461 | None:intergenic | 40.0% | |
| TACTAGGAGAAAAGGTTGGA+GGG | + | chr4_3:69630522-69630541 | None:intergenic | 40.0% | |
| ATACTAGGAGAAAAGGTTGG+AGG | + | chr4_3:69630523-69630542 | None:intergenic | 40.0% | |
| CCTAGGTTAGATAATAGTGG+TGG | + | chr4_3:69630574-69630593 | None:intergenic | 40.0% | |
| CCACCACTATTATCTAACCT+AGG | - | chr4_3:69630571-69630590 | Msa0659290:intron | 40.0% | |
| AAAGAAAACAAAGGACGCGA+AGG | - | chr4_3:69630735-69630754 | Msa0659290:intron | 40.0% | |
| AAGAAAACAAAGGACGCGAA+GGG | - | chr4_3:69630736-69630755 | Msa0659290:intron | 40.0% | |
| !! | AGGAGATTCTGAAACCAACA+TGG | - | chr4_3:69630797-69630816 | Msa0659290:intron | 40.0% |
| CTGAAACCAACATGGAAAGA+TGG | - | chr4_3:69630805-69630824 | Msa0659290:intron | 40.0% | |
| AAGTAACTGGTACAGTACAG+CGG | - | chr4_3:69630878-69630897 | Msa0659290:intron | 40.0% | |
| ! | TCAATTTTCTCTCGTGTCTG+AGG | + | chr4_3:69630913-69630932 | None:intergenic | 40.0% |
| AAACTTATACAGGTCAGTGG+TGG | - | chr4_3:69630967-69630986 | Msa0659290:intron | 40.0% | |
| ATCTTGTCGCCCATTTAACT+TGG | - | chr4_3:69631030-69631049 | Msa0659290:intron | 40.0% | |
| ! | TAGAGTGGTTGGTTCATACA+AGG | - | chr4_3:69631383-69631402 | Msa0659290:intron | 40.0% |
| ! | AGAGTGGTTGGTTCATACAA+GGG | - | chr4_3:69631384-69631403 | Msa0659290:intron | 40.0% |
| AGAGGAGGAATTAAACTGTC+CGG | - | chr4_3:69631450-69631469 | Msa0659290:intron | 40.0% | |
| ATTTGGTTGAGAGGAAAGGA+TGG | + | chr4_3:69631530-69631549 | None:intergenic | 40.0% | |
| CTCTATTTGGTTGAGAGGAA+AGG | + | chr4_3:69631534-69631553 | None:intergenic | 40.0% | |
| TAAGGCTCTATTTGGTTGAG+AGG | + | chr4_3:69631539-69631558 | None:intergenic | 40.0% | |
| ! | TGTCCTTGTTTCATAGGGTA+AGG | - | chr4_3:69631813-69631832 | Msa0659290:intron | 40.0% |
| CAACCTTACCCTATGAAACA+AGG | + | chr4_3:69631819-69631838 | None:intergenic | 40.0% | |
| AAGGTTGTTGCCTTGTCATT+TGG | - | chr4_3:69631832-69631851 | Msa0659290:intron | 40.0% | |
| TCGACTTCTACCTTATGCAT+TGG | - | chr4_3:69631916-69631935 | Msa0659290:intron | 40.0% | |
| AATGCAGCAACACAAGAGAT+GGG | + | chr4_3:69632009-69632028 | None:intergenic | 40.0% | |
| GTATGTGGAAAAGGTTCAGA+AGG | - | chr4_3:69632177-69632196 | Msa0659290:intron | 40.0% | |
| TTCCCTCAATTGCATCAAAC+AGG | + | chr4_3:69632502-69632521 | None:intergenic | 40.0% | |
| TTCTATGCACGGAAAGAGCT+AGG | - | chr4_3:69624009-69624028 | Msa0659290:three_prime_UTR | 45.0% | |
| TCTATGCACGGAAAGAGCTA+GGG | - | chr4_3:69624010-69624029 | Msa0659290:three_prime_UTR | 45.0% | |
| GTAGAACATCGGAATGGAGA+AGG | + | chr4_3:69624038-69624057 | None:intergenic | 45.0% | |
| GATGCAGTAGAACATCGGAA+TGG | + | chr4_3:69624044-69624063 | None:intergenic | 45.0% | |
| TTACTGGGCTCCAAGTGATA+TGG | - | chr4_3:69624323-69624342 | Msa0659290:intron | 45.0% | |
| AGCATGAGAAATAGACGTGC+GGG | - | chr4_3:69624354-69624373 | Msa0659290:intron | 45.0% | |
| AACATCCCTTGCTTGACCAT+AGG | - | chr4_3:69624530-69624549 | Msa0659290:intron | 45.0% | |
| GGCATCAAAGCTATCCAAGT+GGG | + | chr4_3:69624932-69624951 | None:intergenic | 45.0% | |
| GATACATCAGCCAGTAGAGT+TGG | - | chr4_3:69624957-69624976 | Msa0659290:intron | 45.0% | |
| AAGCGTTATCCCACTAAGTG+GGG | + | chr4_3:69625251-69625270 | None:intergenic | 45.0% | |
| GAGTTAGCAGAATAAACCCC+TGG | - | chr4_3:69625294-69625313 | Msa0659290:intron | 45.0% | |
| TCCAGTTCTTGAACAAGCCA+GGG | + | chr4_3:69625314-69625333 | None:intergenic | 45.0% | |
| TTCCAGTTCTTGAACAAGCC+AGG | + | chr4_3:69625315-69625334 | None:intergenic | 45.0% | |
| CACTCATTCTTGATGCGCAT+TGG | + | chr4_3:69625367-69625386 | None:intergenic | 45.0% | |
| GCTTTGATCTGTCTTGTGAG+TGG | - | chr4_3:69625417-69625436 | Msa0659290:CDS | 45.0% | |
| CAGAGGCTGGTAATTAGCTA+AGG | - | chr4_3:69625825-69625844 | Msa0659290:CDS | 45.0% | |
| TGGCAGAAACTCGAATTAGG+TGG | - | chr4_3:69626686-69626705 | Msa0659290:CDS | 45.0% | |
| !! | TACTAAGTGGGTTGGCTACA+TGG | + | chr4_3:69626900-69626919 | None:intergenic | 45.0% |
| ATGTAGCCAACCCACTTAGT+AGG | - | chr4_3:69626899-69626918 | Msa0659290:CDS | 45.0% | |
| ! | CCAGGCTTTATCCTACTAAG+TGG | + | chr4_3:69626913-69626932 | None:intergenic | 45.0% |
| CCACTTAGTAGGATAAAGCC+TGG | - | chr4_3:69626910-69626929 | Msa0659290:CDS | 45.0% | |
| GAGAGGAGGAGATAGAAAGT+AGG | - | chr4_3:69626957-69626976 | Msa0659290:CDS | 45.0% | |
| TGTGAATCAAGCTGACCTTG+AGG | + | chr4_3:69627064-69627083 | None:intergenic | 45.0% | |
| ATAGAACATGAGGGAGGATC+AGG | + | chr4_3:69627267-69627286 | None:intergenic | 45.0% | |
| ! | GTGCTTGAAGCATCAGAGTT+TGG | - | chr4_3:69627365-69627384 | Msa0659290:CDS | 45.0% |
| ! | TTGAAGCATCAGAGTTTGGG+TGG | - | chr4_3:69627369-69627388 | Msa0659290:CDS | 45.0% |
| CAGAGCCTTAAGCTTCACTT+TGG | + | chr4_3:69627461-69627480 | None:intergenic | 45.0% | |
| CAAAGTGAAGCTTAAGGCTC+TGG | - | chr4_3:69627459-69627478 | Msa0659290:CDS | 45.0% | |
| AAGTGAAGCTTAAGGCTCTG+GGG | - | chr4_3:69627461-69627480 | Msa0659290:CDS | 45.0% | |
| TTACTCTCGGGTGGAAATTC+AGG | + | chr4_3:69627544-69627563 | None:intergenic | 45.0% | |
| TGAATTTCCACCCGAGAGTA+AGG | - | chr4_3:69627543-69627562 | Msa0659290:intron | 45.0% | |
| AACAAACAGGCCTTACTCTC+GGG | + | chr4_3:69627556-69627575 | None:intergenic | 45.0% | |
| CACCATAAGCAATTGCAGTC+TGG | - | chr4_3:69627759-69627778 | Msa0659290:intron | 45.0% | |
| ACCCAGACTGCAATTGCTTA+TGG | + | chr4_3:69627764-69627783 | None:intergenic | 45.0% | |
| ! | TTCACGCAAGGAGCCTTTTT+CGG | - | chr4_3:69627863-69627882 | Msa0659290:intron | 45.0% |
| GGGAGTCAGAGGTTCAAATA+AGG | - | chr4_3:69627884-69627903 | Msa0659290:intron | 45.0% | |
| TTGTTCCATTCCTCAAACCC+TGG | + | chr4_3:69627984-69628003 | None:intergenic | 45.0% | |
| GGGTCGGTGCAGATATTAAT+GGG | + | chr4_3:69628063-69628082 | None:intergenic | 45.0% | |
| AGGGTCGGTGCAGATATTAA+TGG | + | chr4_3:69628064-69628083 | None:intergenic | 45.0% | |
| CTGAGCTCAACAAGCTTAAC+CGG | - | chr4_3:69628327-69628346 | Msa0659290:intron | 45.0% | |
| GCTATAGGACGTTGCATTGA+TGG | + | chr4_3:69628470-69628489 | None:intergenic | 45.0% | |
| TCCCGTGTATTGTGTCTATC+TGG | - | chr4_3:69628584-69628603 | Msa0659290:intron | 45.0% | |
| CCCAGATAGACACAATACAC+GGG | + | chr4_3:69628588-69628607 | None:intergenic | 45.0% | |
| CCCGTGTATTGTGTCTATCT+GGG | - | chr4_3:69628585-69628604 | Msa0659290:intron | 45.0% | |
| CTTTGGATATTGCCAGGTCT+AGG | - | chr4_3:69628818-69628837 | Msa0659290:intron | 45.0% | |
| TCGATGATAGGAACAGAACG+AGG | - | chr4_3:69628887-69628906 | Msa0659290:exon | 45.0% | |
| CGATGATAGGAACAGAACGA+GGG | - | chr4_3:69628888-69628907 | Msa0659290:exon | 45.0% | |
| GAAAGTAAACACAGGCCAGA+TGG | - | chr4_3:69629018-69629037 | Msa0659290:intron | 45.0% | |
| TTCTAATCCCCATGAGAGTG+GGG | - | chr4_3:69629050-69629069 | Msa0659290:intron | 45.0% | |
| GAATAATCCCCACTCTCATG+GGG | + | chr4_3:69629060-69629079 | None:intergenic | 45.0% | |
| GAGAATAATCCCCACTCTCA+TGG | + | chr4_3:69629062-69629081 | None:intergenic | 45.0% | |
| ! | TGCAAAGGGAAGGTGTAGAA+TGG | - | chr4_3:69629119-69629138 | Msa0659290:intron | 45.0% |
| ! | GCAAAGGGAAGGTGTAGAAT+GGG | - | chr4_3:69629120-69629139 | Msa0659290:intron | 45.0% |
| ! | TGATGTGGTTTGGATAACGC+TGG | + | chr4_3:69629269-69629288 | None:intergenic | 45.0% |
| ! | GGAGTGTTACTGATGTGGTT+TGG | + | chr4_3:69629279-69629298 | None:intergenic | 45.0% |
| !! | TGCAAGGAGTGTTACTGATG+TGG | + | chr4_3:69629284-69629303 | None:intergenic | 45.0% |
| !! | GCTTTTGGGAATTGTCGGAA+TGG | - | chr4_3:69629312-69629331 | Msa0659290:intron | 45.0% |
| ! | ATCATCCCTTAATCTAGGGC+TGG | + | chr4_3:69629376-69629395 | None:intergenic | 45.0% |
| GCCCTAGATTAAGGGATGAT+AGG | - | chr4_3:69629376-69629395 | Msa0659290:intron | 45.0% | |
| GATTAAGGGATGATAGGTCG+AGG | - | chr4_3:69629382-69629401 | Msa0659290:intron | 45.0% | |
| GATAGGTCGAGGAGTAATCA+AGG | - | chr4_3:69629393-69629412 | Msa0659290:intron | 45.0% | |
| TCAAGGTGAAGATCAGGTGT+TGG | - | chr4_3:69629410-69629429 | Msa0659290:intron | 45.0% | |
| AGCGATTCAGTTGCTCCTTA+TGG | - | chr4_3:69629447-69629466 | Msa0659290:intron | 45.0% | |
| ATGTGGTTCAGATGGCAGAA+TGG | - | chr4_3:69629488-69629507 | Msa0659290:intron | 45.0% | |
| TGGCCGATGTAGATAAAGGT+TGG | - | chr4_3:69629508-69629527 | Msa0659290:intron | 45.0% | |
| GGCCGATGTAGATAAAGGTT+GGG | - | chr4_3:69629509-69629528 | Msa0659290:intron | 45.0% | |
| TGTCTCCGGCACAGAAAATT+TGG | - | chr4_3:69629560-69629579 | Msa0659290:intron | 45.0% | |
| CGGCACAGAAAATTTGGTTG+AGG | - | chr4_3:69629566-69629585 | Msa0659290:intron | 45.0% | |
| AAGCCATGAATCCAGGTTCT+GGG | + | chr4_3:69629617-69629636 | None:intergenic | 45.0% | |
| TTGGCCAATGAACGATGGAT+CGG | - | chr4_3:69629635-69629654 | Msa0659290:intron | 45.0% | |
| ! | ATTTTCTGCCGTCCTACAGT+TGG | + | chr4_3:69629724-69629743 | None:intergenic | 45.0% |
| CTCGCACCATAATTCCAATC+AGG | + | chr4_3:69629816-69629835 | None:intergenic | 45.0% | |
| TTTCCCACTTGCACATGAGA+TGG | + | chr4_3:69629938-69629957 | None:intergenic | 45.0% | |
| ATGTGCAAGTGGGAAAACAG+AGG | - | chr4_3:69629942-69629961 | Msa0659290:intron | 45.0% | |
| ! | AGCCTATCACAAATCGGTTC+TGG | - | chr4_3:69630214-69630233 | Msa0659290:intron | 45.0% |
| !! | GTCCAGAACCGATTTGTGAT+AGG | + | chr4_3:69630219-69630238 | None:intergenic | 45.0% |
| GGACATACTCCAACTCAGAA+CGG | - | chr4_3:69630235-69630254 | Msa0659290:intron | 45.0% | |
| ! | TCTAAAGCCCTGTGATGCAA+AGG | - | chr4_3:69630354-69630373 | Msa0659290:intron | 45.0% |
| AGAGTAGCCTTTGCATCACA+GGG | + | chr4_3:69630364-69630383 | None:intergenic | 45.0% | |
| GATGCAAAGGCTACTCTCTT+CGG | - | chr4_3:69630367-69630386 | Msa0659290:intron | 45.0% | |
| ATCAAGCCAGATCCTGCTAT+TGG | - | chr4_3:69630433-69630452 | Msa0659290:intron | 45.0% | |
| GGCTCCATACTGTCAAACAT+TGG | + | chr4_3:69630475-69630494 | None:intergenic | 45.0% | |
| GAATAGTCCTATGGGAGACA+TGG | - | chr4_3:69630687-69630706 | Msa0659290:intron | 45.0% | |
| ! | TTTTGGTCCATGTCTCCCAT+AGG | + | chr4_3:69630697-69630716 | None:intergenic | 45.0% |
| GGAGACATGGACCAAAATGA+TGG | - | chr4_3:69630700-69630719 | Msa0659290:intron | 45.0% | |
| ! | CCTCATCAGGTCCATCATTT+TGG | + | chr4_3:69630714-69630733 | None:intergenic | 45.0% |
| !! | CCAAAATGATGGACCTGATG+AGG | - | chr4_3:69630711-69630730 | Msa0659290:intron | 45.0% |
| AGAAAACAAAGGACGCGAAG+GGG | - | chr4_3:69630737-69630756 | Msa0659290:intron | 45.0% | |
| AGTAACTGGTACAGTACAGC+GGG | - | chr4_3:69630879-69630898 | Msa0659290:intron | 45.0% | |
| ! | GAGTGGTTGGTTCATACAAG+GGG | - | chr4_3:69631385-69631404 | Msa0659290:intron | 45.0% |
| GAGGAGGAATTAAACTGTCC+GGG | - | chr4_3:69631451-69631470 | Msa0659290:intron | 45.0% | |
| CTCTTCGTCACCAAATGACA+AGG | + | chr4_3:69631845-69631864 | None:intergenic | 45.0% | |
| GAATGCAGCAACACAAGAGA+TGG | + | chr4_3:69632010-69632029 | None:intergenic | 45.0% | |
| ! | TCTTTTTGTGCAGGCGTATG+TGG | - | chr4_3:69632162-69632181 | Msa0659290:intron | 45.0% |
| !!! | TTTTATACTAATTATTATTT+TGG | - | chr4_3:69628155-69628174 | Msa0659290:intron | 5.0% |
| GTCATCAATCAAAGCTGCGG+TGG | + | chr4_3:69623903-69623922 | None:intergenic | 50.0% | |
| GAGAGGGTAGTAAGTAGCAC+TGG | + | chr4_3:69623956-69623975 | None:intergenic | 50.0% | |
| CGGCATCAAAGCTATCCAAG+TGG | + | chr4_3:69624933-69624952 | None:intergenic | 50.0% | |
| ! | TACTGGCTGATGTATCGGCA+CGG | + | chr4_3:69624953-69624972 | None:intergenic | 50.0% |
| ATGTAGCCTACCCCACTTAG+TGG | - | chr4_3:69625238-69625257 | Msa0659290:intron | 50.0% | |
| TGTAGCCTACCCCACTTAGT+GGG | - | chr4_3:69625239-69625258 | Msa0659290:intron | 50.0% | |
| GTTATCCCACTAAGTGGGGT+AGG | + | chr4_3:69625247-69625266 | None:intergenic | 50.0% | |
| CCAGTTCTTGAACAAGCCAG+GGG | + | chr4_3:69625313-69625332 | None:intergenic | 50.0% | |
| CAGTCTGGGTGTTCCTTTAC+AGG | - | chr4_3:69627774-69627793 | Msa0659290:intron | 50.0% | |
| ! | TCACGCAAGGAGCCTTTTTC+GGG | - | chr4_3:69627864-69627883 | Msa0659290:intron | 50.0% |
| GAACCTCTGACTCCCGAAAA+AGG | + | chr4_3:69627879-69627898 | None:intergenic | 50.0% | |
| !! | GAAAGTGTCTCCAGGGTTTG+AGG | - | chr4_3:69627971-69627990 | Msa0659290:intron | 50.0% |
| TGTCTCCAGGGTTTGAGGAA+TGG | - | chr4_3:69627976-69627995 | Msa0659290:intron | 50.0% | |
| AGACACAATACACGGGAGTG+TGG | + | chr4_3:69628581-69628600 | None:intergenic | 50.0% | |
| TTGCCAGGTCTAGGAGAAGT+AGG | - | chr4_3:69628827-69628846 | Msa0659290:CDS | 50.0% | |
| TAAAACCATGTGGAGGGCTC+CGG | + | chr4_3:69628855-69628874 | None:intergenic | 50.0% | |
| GATAGGAACAGAACGAGGGA+TGG | - | chr4_3:69628892-69628911 | Msa0659290:five_prime_UTR | 50.0% | |
| AGCCATGAATCCAGGTTCTG+GGG | + | chr4_3:69629616-69629635 | None:intergenic | 50.0% | |
| CAAGCCATGAATCCAGGTTC+TGG | + | chr4_3:69629618-69629637 | None:intergenic | 50.0% | |
| CAGAACCTGGATTCATGGCT+TGG | - | chr4_3:69629616-69629635 | Msa0659290:intron | 50.0% | |
| ATTGGCCAAGCCATGAATCC+AGG | + | chr4_3:69629624-69629643 | None:intergenic | 50.0% | |
| ! | ATGGCTTGGCCAATGAACGA+TGG | - | chr4_3:69629630-69629649 | Msa0659290:intron | 50.0% |
| TGGCCAATGAACGATGGATC+GGG | - | chr4_3:69629636-69629655 | Msa0659290:intron | 50.0% | |
| GAAGGAAGCCAACTGTAGGA+CGG | - | chr4_3:69629713-69629732 | Msa0659290:intron | 50.0% | |
| CTCATTTCCCAGTCAGTAGG+TGG | - | chr4_3:69629759-69629778 | Msa0659290:intron | 50.0% | |
| ATTTCCCAGTCAGTAGGTGG+AGG | - | chr4_3:69629762-69629781 | Msa0659290:intron | 50.0% | |
| GGAGACATCTGTTCATCACC+AGG | + | chr4_3:69629795-69629814 | None:intergenic | 50.0% | |
| AGTAAGCAGCAAGTTGCTCC+AGG | - | chr4_3:69629870-69629889 | Msa0659290:intron | 50.0% | |
| !! | TTGCTGACTCCGTTCTGAGT+TGG | + | chr4_3:69630247-69630266 | None:intergenic | 50.0% |
| GAGAGTAGCCTTTGCATCAC+AGG | + | chr4_3:69630365-69630384 | None:intergenic | 50.0% | |
| ! | CTGGGGGGCATAATTTGATG+TGG | - | chr4_3:69631104-69631123 | Msa0659290:intron | 50.0% |
| TAATGGTTGAAAGGGGAGGG+AGG | - | chr4_3:69631416-69631435 | Msa0659290:intron | 50.0% | |
| AGGGAGGAAGGGGAATAAAG+AGG | - | chr4_3:69631432-69631451 | Msa0659290:intron | 50.0% | |
| GAGGAAGGGGAATAAAGAGG+AGG | - | chr4_3:69631435-69631454 | Msa0659290:intron | 50.0% | |
| CAGCAACACAAGAGATGGGT+AGG | + | chr4_3:69632005-69632024 | None:intergenic | 50.0% | |
| TGTGCAGGCGTATGTGGAAA+AGG | - | chr4_3:69632168-69632187 | Msa0659290:intron | 50.0% | |
| ATCAAAGCTGCGGTGGAGTG+CGG | + | chr4_3:69623896-69623915 | None:intergenic | 55.0% | |
| !! | CGATGGACTAGTGCCCTGTT+TGG | - | chr4_3:69624568-69624587 | Msa0659290:intron | 55.0% |
| !! | CCCCTGGCTTGTTCAAGAAC+TGG | - | chr4_3:69625310-69625329 | Msa0659290:intron | 55.0% |
| !! | GCTCTGGGGAGTTAGATGAG+CGG | - | chr4_3:69627475-69627494 | Msa0659290:CDS | 55.0% |
| AAACAGGCCTTACTCTCGGG+TGG | + | chr4_3:69627553-69627572 | None:intergenic | 55.0% | |
| !!! | GAGCCTTTTTCGGGAGTCAG+AGG | - | chr4_3:69627873-69627892 | Msa0659290:intron | 55.0% |
| ! | ATCTGCACCGACCCTGATGT+TGG | - | chr4_3:69628069-69628088 | Msa0659290:intron | 55.0% |
| GCTCCTACTTCTCCTAGACC+TGG | + | chr4_3:69628833-69628852 | None:intergenic | 55.0% | |
| GGTCTAGGAGAAGTAGGAGC+CGG | - | chr4_3:69628833-69628852 | Msa0659290:CDS | 55.0% | |
| GCTGTTGGGAACTGCAGAAG+AGG | - | chr4_3:69628943-69628962 | Msa0659290:intron | 55.0% | |
| TGGCCCGATCCATCGTTCAT+TGG | + | chr4_3:69629642-69629661 | None:intergenic | 55.0% | |
| GATCGGGCCATAGCTTAGAC+AGG | - | chr4_3:69629652-69629671 | Msa0659290:intron | 55.0% | |
| ! | CATGCCTCCACCTACTGACT+GGG | + | chr4_3:69629769-69629788 | None:intergenic | 55.0% |
| ACATGCCTCCACCTACTGAC+TGG | + | chr4_3:69629770-69629789 | None:intergenic | 55.0% | |
| ! | AGTCAGTAGGTGGAGGCATG+TGG | - | chr4_3:69629769-69629788 | Msa0659290:intron | 55.0% |
| ACAGCTTCCATTGTTCCCCC+AGG | - | chr4_3:69630109-69630128 | Msa0659290:intron | 55.0% | |
| TCTTGCTCCTGGGGGAACAA+TGG | + | chr4_3:69630119-69630138 | None:intergenic | 55.0% | |
| TATGTGCGAGAGAGGCTGAG+AGG | + | chr4_3:69630294-69630313 | None:intergenic | 55.0% | |
| GCCTCTCTCGCACATATCCT+CGG | - | chr4_3:69630298-69630317 | Msa0659290:intron | 55.0% | |
| TCCGAGGATATGTGCGAGAG+AGG | + | chr4_3:69630302-69630321 | None:intergenic | 55.0% | |
| CTCGCACATATCCTCGGAAC+TGG | - | chr4_3:69630304-69630323 | Msa0659290:intron | 55.0% | |
| GTTGAAAGGGGAGGGAGGAA+GGG | - | chr4_3:69631421-69631440 | Msa0659290:intron | 55.0% | |
| TTGAAAGGGGAGGGAGGAAG+GGG | - | chr4_3:69631422-69631441 | Msa0659290:intron | 55.0% | |
| TCAAAGCTGCGGTGGAGTGC+GGG | + | chr4_3:69623895-69623914 | None:intergenic | 60.0% | |
| CTGGGGAGTTAGATGAGCGG+AGG | - | chr4_3:69627478-69627497 | Msa0659290:CDS | 60.0% | |
| ATCATAGGCGCCCCAGAACC+TGG | - | chr4_3:69629603-69629622 | Msa0659290:intron | 60.0% | |
| CGCCCCAGAACCTGGATTCA+TGG | - | chr4_3:69629611-69629630 | Msa0659290:intron | 60.0% | |
| GGTTGAAAGGGGAGGGAGGA+AGG | - | chr4_3:69631420-69631439 | Msa0659290:intron | 60.0% | |
| ! | GTAGGTGGAGGCATGTGGCC+TGG | - | chr4_3:69629774-69629793 | Msa0659290:intron | 65.0% |
| GGAGCTGCTGACCAGTTCCG+AGG | + | chr4_3:69630318-69630337 | None:intergenic | 65.0% | |
| TGCGGTGGAGTGCGGGATGC+GGG | + | chr4_3:69623888-69623907 | None:intergenic | 70.0% | |
| CTGCGGTGGAGTGCGGGATG+CGG | + | chr4_3:69623889-69623908 | None:intergenic | 70.0% | |
| AGGAGCCGGAGCCCTCCACA+TGG | - | chr4_3:69628847-69628866 | Msa0659290:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 69623858 | 69632522 | 69623858 | ID=Msa0659290;Name=Msa0659290 |
| chr4_3 | mRNA | 69623858 | 69632522 | 69623858 | ID=Msa0659290-mRNA-1;Parent=Msa0659290;Name=Msa0659290-mRNA-1;_AED=0.11;_eAED=0.11;_QI=271|1|1|1|0.6|0.5|6|318|779 |
| chr4_3 | exon | 69623858 | 69624205 | 69623858 | ID=Msa0659290-mRNA-1:exon:20450;Parent=Msa0659290-mRNA-1 |
| chr4_3 | exon | 69625402 | 69626336 | 69625402 | ID=Msa0659290-mRNA-1:exon:20449;Parent=Msa0659290-mRNA-1 |
| chr4_3 | exon | 69626489 | 69627546 | 69626489 | ID=Msa0659290-mRNA-1:exon:20448;Parent=Msa0659290-mRNA-1 |
| chr4_3 | exon | 69628338 | 69628584 | 69628338 | ID=Msa0659290-mRNA-1:exon:20447;Parent=Msa0659290-mRNA-1 |
| chr4_3 | exon | 69628821 | 69628949 | 69628821 | ID=Msa0659290-mRNA-1:exon:20446;Parent=Msa0659290-mRNA-1 |
| chr4_3 | exon | 69632311 | 69632522 | 69632311 | ID=Msa0659290-mRNA-1:exon:20445;Parent=Msa0659290-mRNA-1 |
| chr4_3 | five_prime_UTR | 69632311 | 69632522 | 69632311 | ID=Msa0659290-mRNA-1:five_prime_utr;Parent=Msa0659290-mRNA-1 |
| chr4_3 | five_prime_UTR | 69628891 | 69628949 | 69628891 | ID=Msa0659290-mRNA-1:five_prime_utr;Parent=Msa0659290-mRNA-1 |
| chr4_3 | CDS | 69628821 | 69628890 | 69628821 | ID=Msa0659290-mRNA-1:cds;Parent=Msa0659290-mRNA-1 |
| chr4_3 | CDS | 69628338 | 69628584 | 69628338 | ID=Msa0659290-mRNA-1:cds;Parent=Msa0659290-mRNA-1 |
| chr4_3 | CDS | 69626489 | 69627546 | 69626489 | ID=Msa0659290-mRNA-1:cds;Parent=Msa0659290-mRNA-1 |
| chr4_3 | CDS | 69625402 | 69626336 | 69625402 | ID=Msa0659290-mRNA-1:cds;Parent=Msa0659290-mRNA-1 |
| chr4_3 | CDS | 69624176 | 69624205 | 69624176 | ID=Msa0659290-mRNA-1:cds;Parent=Msa0659290-mRNA-1 |
| chr4_3 | three_prime_UTR | 69623858 | 69624175 | 69623858 | ID=Msa0659290-mRNA-1:three_prime_utr;Parent=Msa0659290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
